>input_sequence_58771
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-------------------------------------------GTATAAATC-ACCACGCCTTCAACCCCAACATCGCAC
ACACCTCCATTGATCCTCGGTGCAGCAGACACACGAGCACACCACACAGACACACGAGCACACCACACGCCAGCACAGAC
CATGAGGAATGCGGCAGTTGACGCGCAAATGAACGGCGGCGGCGCCTCTTCGTCGCCCATGATCCCGCCGCCGTTCTGGT
CGACGCCGACGCCGTACCTCTTCATCGGCTTCGCGGTGGTGATGAGCCTCATCGCGGTGGCGCTGGCCGTGCTCCTCTGC
TCCCGCCGCAGGGAGGGAGACCGCGAGGACGAGGAGGCGGTCCCGGCCGGGATGATGTCCGTGCGCGTGCTGACGCCTCT
GGACAGGGAGGTGCCCAAGGTGGTGGTGGTGATGGCTGGCGACGACATGCCGTCCTTCCTCGCCAGCGCCACGCCGCTCG
CCTTCGCTGAGGCGGCTAAGGTGCAGCGCCCGTACTGCCAGTGCGGCGCCAAGGACGTCGCCGCCCCCGTATAGCTAACT
GTGGCTCTCT--CGCCGCAGATCGACGCCGCAATATATATATGTGTGTCGATCAAATCGAATGGGAGGAGTTAAATTTTG
TTTCTTTTATGTAGATTATTACAGTAGTTTACATCATTTTCCTCCCTAATTACTGGAGTAGTTTTGGTGCAACGATGCGA
ATGCGATGCTGTGGCCTTGTCGAGGTGGCTTGTTGTTCGGAGCTTCAGAGCATGTAG-------CGAGTGCGCAATTAAT
ATGCTAATTTGGTTGCATA--AGATTTCCTGGTCTTATAAAAAAAAT--------------TAAATGTGAGCATGATTTG
GCTTTTAGCTAGTTCTGCT---GACGTTTGCTTTGATGTGACTTGCTATTTCCTGATCATCTGACCTAAAGATATATCCA
GTGAGATATC------------------CATAATCTTGAAGTGGCAC--AAAAAATGTGTATAAATTTAGATAAAGAAGT
GTGCAAGAACCGATTTGCAGATATTTAAGCCAGGAGAGTATCTACTGATACAAGTGGTATCACTGGATACTTCCCCTAGA
GCTGCACATAGTTTTGGATGTACATCTTCCCATGTCGTTTTATTTTTTCGGGGAACATCTTCTTAATTCTCCCTTTTCGA
AAGGTATCTTCCCAATTTTCATTAGATAAGGAACTAAAATTAGGATCATCCTTTTCTAA---------------------
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-----------------------------------------------------------------------------
>chr6A_1_TraesCS6A01G170200
TCTAATCCTCAAATTGATCCGAAGCACCCAACGCCAGAACTCGTCAGCGCGCACACATGATAAAACTGTAACCTTGTCA-
CCCAGGGAGATGACAATAATATACGTTGAAGCTCCATCAACTTCATCCCACCAGACAAATTCAAGGTGGGTCGAAGCCCG
GAAGGCCATCTCGGCGATGAAGCAATGCCATTTGTTGAGCGCTGCCTCTGCGAGGACCACACCATCCTCACACGCCTCCG
AGCGGTTCAGAGCACCATTAAAACAAAAACGGTGTGGGG-GGACTTTATTCCATGCAAATTGCTCCACCATTGTCTCGCC
GGCATCGATCAAAGGAAAATCCTTAGCTATTCCTACCCCTATGGCTACTGGACCGANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCGTGCG----------
--------------------------------------------------------------------------------
TTCGCTCTGGTCTCGCAAGACGAGAAGATTGAAGCATGCATAGTTGAAACAATATTTCGAAGTGATTTACAGAAAATCAA
GTGAGTTGGTTAATTAGATTAAATAACACGCCTCTCAGGTATCATTTGTAAACGCGTAACATCACCAATCTAGTTGCTCG
CATCCTGTTTCGAAAAAAGAATCGTCTTGCACCAACTTTATTCTCCCTCAAGTTGAAACTTTGCAAAA------------
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---------TTAAG------------------------------------------------------------------
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---------------------------------------ATCAGCA---------------CCACCCCTTGAAAAAACCA
TGCCACAGTCCACGGATCAACTCCTCCGCCTCTGCCAACTTTTCGTTTTGAGTTTCTGCCGCTACTCAAAATAATGTCCA
GATATACCCATCCCACGTGGTCCATCAAGTTGGTTTCTGGTGGGCACAAACCTGGGGGCACACAGCTCAGCCACCGTGTG
TCCCACTAAG----------CTCTCCCAGCCTCCCTCTCCCCCGTATAAATC-ACCACGCCTTCAACCCCAACATCGCAC
ACACCTCCATTGATCCTCGGTGCAGCAGACACACGAGCACACCACACAGACACACGAGCACACCACACGCCAGCACAGAC
CATGAGGAATGCGGCAGTTGACGCGCAAATGAACGGCGGCGGCGCCTCTTCGTCGCCCATGATCCCGCCGCCGTTCTGGT
CGACGCCGACGCCGTACCTCTTCATCGGCTTCGCGGTGGTGATGAGCCTCATCGCGGTGGCGCTGGCCGTGCTCCTCTGC
TCCCGCCGCAGGGAGGGAGACCGCGAGGACGAGGAGGCGGTCCCGGCCGGGATGATGTCCGTGCGCGTGCTGACGCCTCT
GGACAGGGAGGTGCCCAAGGTGGTGGTGGTGATGGCTGGCGACGACATGCCGTCCTTCCTCGCCAGCGCCACGCCGCTCG
CCTTCGCTGAGGCGGCTAAGGTGCAGCGCCCGTACTGCCAGTGCGGCGCCAAGGACGTCGCCGCCCCCGTATAGCTAACT
GTGGCTCTCT--CGCCGCAGATCGACGCCGCAATATATATATGTGTGTCGATCAAATCGAATGGGAGGAGTTAAATTTTG
TTTCTTTTATGTAGATTATTACAGTAGTTTACATCATTTTCCTCCCTAATTACTGGAGTAGTTTTGGTGCAACGATGCGA
ATGCGATGCTGTGGCCTTGTCGAGGTGGCTTGTTGTTCGGAGCTTCAGAGCATGTAG-------CGAGTGCGCAATTAAT
ATGCTAATTTGGTTGCATA--AGATTTCCTGGTCTTATAAAAAAAAT--------------TAAATGTGAGCATGATTTG
GCTTTTAGCTAGTTCTGCT---GACGTTTGCTTTGATGTGACTTGCTATTTCCTGATCATCTGACCTAAAGATATATCCA
GTGAGATATC------------------CATAATCTTGAAGTGGCAC--AAAAAATGTGTATAAATTTAGATAAAGAAGT
GTGCAAGAACCGATTTGCAGATATTTAAGCCAGGAGAGTATCTACTGATACAAGTGGTATCACTGGATACTTCCCCTAGA
GCTGCACATAGTTTTGGATGTACATCTTCCCATGTCGTTTTATTTTTTCGGGGAACATCTTCTTAATTCTCCCTTTTCGA
AAGGTATCTTCCCAATTTTCATTAGATAAGGAACTAAAATTAGGATCATCCTTTTCTAAATAAAAGCTTCCCAGTGGAAT
TAGAAATACGTTGTCCCTATTTGAGACACAGAGTGTTGATCCAGTTCTTCGAGAGTTAATTGAACTATTCCTGTACTTCA
AAAGCTTTGTTCGGTGGATGGCGGTTCTACCTATCCCATGGGAAGAAGAAAGAGATGCCAATCAATTATAAGTAAGGGTC
TGTTCAGGCCTCATCTAGATGTGACATAACTATGTCACATTTAAGCTGATATCATCACTTTTTTTAATAGATGTCATCAC
CTATTTGTGGCCTTTTTTATGTTTGTTGTTCTTTTTTTTGTCCAGCCCAGCGTGACATTATTTTTTTAGAATCATGTAGC
ATCAGTGGTAGCATCCAGCATGACTTAAGGAGAG--ACCCAGATCGTGCTTGCAAGGGCCACGCCTAGCGCGCCTCCGTG
CTTGCTAA---TACGATCGCTACCTCCGGTAGCCTAGCCGTACGCAGTAGTACACTTTGTG---------------TTTT
TCTCCTTTTGTTTTTTCCTTTTTATGATTTTTATTTTTCTCTTTCAGGTTTAGTTGTTCTTCGAGTTTTCTTCCATTTTT
TATTT-TTTATACTTTTTGTATTATAAAGATTATTCTAATATATGTTCAACATTT-TTTAAATACAAATTAAACATTTTT
TAATATATGGAGA-------------------------------------------------------------------
----------------------------------------------------------------------ACA-CTTTCT
TTTCAAATACACATTGAACACATTTTTT--ATAGGGTGAACACATTTTTCAAATACACACTGAACAAAATTTAATATATT
ATGA--TTTTTTAATATAGATTAAACTGTTTTTATAT---------------------------GTATGGTGAACTTTTT
TTAATATACAAAGTAAACCTTTTACAAATACACACTGAACAATTACAATTA-----------------------------
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------------------------------------------------------------------------------AA
ATGTTTATGTATTCAAGCTCTTCGACGAGCAAAATGCACAAGACAGCCGTTGATTCACAAGCAAAAGATGAGTTGCGAGT
TGAGGATGGACTTGCAACTGGGGCAACTACAATTACAAGTCCAGTTGCGAGTCGATTAAGGAATTGCAGTTGGAACA
>chr6B_1
TCTAATCCTCAAATTGATCTGAAGCACCCAATGCCAGACCTCGTCAGCGCGCACGCATGATAAAAATGTAACCTTGTCAC
CCCGGGGACATGACAAGAATCTATGTTGAAGCTCCATCAACTTCATCCCACTGGACAAATTCGAGGTGGATCGAAGCCTG
GAAGGGCATCTTGACGAAGAAGCAATACCATTTGCTGAGCGTCGCCTCTGCGAGGACCACACCATCCTCACAAGCCTCCC
AGCGGTTCGAAGCACCATTAGAACAAAAGCAGTGTGGGAAAGACTTTATTCCATGCAAACGGCTCAACCAGCGTCTCGCC
GCCATCTATCAAAGGCAAATCCTTAGCTATTCCTACCCCTATCGCTACTGGACCGAACCCCTGGGTCATGTTGCACCGAC
CGCCACCGGAGCGACAGAGGGAGGGGGGGTTGGATTTGCTA---------------------------------------
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-------------------------------AAGCATGCGTAGTTCAAACAGTATTTCGAAGTGATTTACAGAAAATCAA
GTGAGTTAGTTAATTAGATTAATGAACACGCCTCTCAGGTATCATATGTATACGCATAACATCACCAATCTAGTTGCTAG
CATCCTGTTTCGAAAAAAGAATCGTCTAGCACCAACTTTATTCTCTATCAAGTTGAAACTTTGCAAAAGATTGGAACTGC
ACCCCGGCCCCCGCGTCGCCTAGCCTAGGCGACACGGGCGGCAG------------------------------------
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---CCTCCAACCGTGCCGCCGCCGGCACCCCCTCGCCGCCGCCGGAGGCCACCACTGGGCAAAGCCCGCGCCGTGGCGGC
GGCGGCGGGGTCTCCCTCCGTGGTGCGGCTCTCCTCGCGCGGGGCCCCATGGCTGGCAGCCGCCTCCTGGTGGTTCATCG
GAGCCCCTTCCGATGCCCCGGCGACCTACAGCGCTCCTCCTAGTCGCGGATCCGGTGGCTCCCTCCTCCTGCGCCCCATG
GTGGCCGTCCCGGCGGCGTCCCTCCGGCGCCAGATCTGGCGCCGCTGGCGCAGTCCCTCCCCACCGTCGTCACCGGCGCT
GACCTGGTGCGGCGCGTCAACCCCGCCCCCCGCCCTCCCCTGCGCTCCATCTCAACTGGCCACCCCCTGGCCCTGGCTGG
CCGGCGTCCTCCCGATGGCAGGGCCTTGTCCCGGCCGTGCCTCCTCTCTGGCTGGCCACGGTGGGGCTGATGCCCCCCTG
GCCTTCGGCTGTCCGGCATCTTCCAGGCAGCGGAGCCTCGTCCCAGGCTCCCAGCCATGCCTCTTCCCTTGAGCTGGTTG
TGGTGTGCTGTGGGCGGCGATCTATCCTGTGGTGGCCATCTGCGGTGTTGCGTCCAGCGGCGCCCTATGTCATCTTTCCT
GGTGATTGGTGCGCGGCTCTTCTCCCAGCGGTTGTGGTCTTGGCCTGCTTTGGCGGCCTTGTCTCTAAATCCTATCTGGC
CTTTGGGATTGTGCGGAATTTGGCCGGGGCGAAAGCCTTGCTCGGCTCGCCGATGCTGGCGGCAGCGACACCTGCGGGTG
TCGTTCCCTTCTTGGAGGTGCCGTCATGGCCTCTTCTCCGCGCCCCTACGCGAGTATCGGGGAAACCCCAGATCTGGTTC
ACTAGATCGGACGGCGGCGGCGTCTTGGCGTTGTATCCTTCATGAAGGCGCTGTTTTGTTGCTCGTGGTGTGTTTGGTGT
TGGCATTGGAGACTTCGGACGCTTTGCTGGTCCAGGCTGCTCCTCTTGGTATGGGCTTCCGGGCGCTATGCACGGCCTCG
ACGGCACTCTCTTCATGGCTTCTCCTTCCAGTCTGGCCAAGTCCTGCACCCCATTTGCCGATCCTCTAGGCGCATAGGTG
AGAGGTACGTTGATCCGGTTTGTTCTGGAGGCGCGGCCGTGCGACGATGGTGCCCGGCGTTGGTCGCGACGCGGCCTTGA
TACCTTTGTATCTCGTATCTTTGGGTTGATGGCCGGAGTTTGAGCTAGGAGAGTTCTTTGCTGTGTTGTATCCCTTCTTG
TTGTTCCCACACTTTCGTGTGATGCTTCTCTCTTTTCCTCTTGTATGCCTATGTAATTTCTCTTCTACCTATCAATGAAT
GATACCCAAGCTTTACGTATTCGCGAAAAAAAAACTTTAATCAGCTCCCAGCAACACCCCTTGAA------AAACAACCA
CGCCACAGTCCACAGAT-AACTCCTCCGCCCCTACCAACTGTTCGTTTTGAGTTTCTGCCGCTACTCAAAATAATGTCCA
GATATACCCATCCCACGTGGTCCATCAAGTTGGTTTCTGGTGGGCACAAACCTGGGGGCACACAGCTCAGCCACCGTGTG
TCCCACTAAGCTTCCATGCACTCTCCCAGCCTCCCTCTCTCCCGTATAAATCCACCACACCTTCAACCCCAACATCGCAC
ACACCTCCATTGATCCTCGGT------GACACACGAGCACACCACACAGACACACAC-CACACCACACGTCAACACAGAC
CATGAGGAATGGGGCACTTGACGCGCAAATGAACGGCGGCGGCGCCTCTTCGTCGCCCATGATCCCGCCCCCGTTCTGGT
CGACGCCGACGCCGTACCTCTTCATCGGCTTCGCGGTGGTGATGAGCCTCATCGCGGTGGCGCTGGCTGTGCTCCTCTGC
TCCCGCCGCAGGGAGGGAGGCCGCGAGGACGAGGAGGCGGTCCCGGCCGGGATGATGTCTGTGCGCGTGCTGACGCCGTT
GGACAGGGAGGTGCCCAAGGTGGTGGTGGTGATGGCCGGCGACGACATGCCGTCCTTCCTCGCCAGCGCCACGCCGCTCG
CCTTCGCCGAGGCGGCCAAGGTGCAGCGCCCGTACTGCCAGTGCGGCGCCAAGGACGTCGCCGCCCCCGTATAGCTAACT
GTGGCTCTCT--CGCCGCCGATCGACACCCAAGTATATATGTGTCGGTT----AAATCAAACGGGGGGAGCTAAATTTTG
CTTCTTTTATGTAGATTATTACACTAGTTTACATCATTTTCCTCCCTAATT-----AGTAGTTTTGGTGCAACGATGCGA
ATGCGGTGCTGTGGCCTTGTCCAGGTGGCTTGTTGTTCGGAGCTTCAGAGCATGTAG-------CGAGTGCGCAATTAAT
ATGCTAATTTGGTTGCATA--AAATTTCCTGTTCTTATAAATATTTTTTT--------------ATGTGAGCATGATTTG
ACTTTTAGCTAGTTCTGCT---GGCATTTGCTTTGATGCGACTTGCTATTTCCTGGTCGTCCGACCTAAAGATATATCCA
GTGAGATATC------------------CATAATCTTGAAGTGGCACAAAAAAAATGTGTATAAATTTAGATAAAGAAGT
GTGCAAGAACCGATTTGCAGATATTTAAACCAGGAGAGTATCTACTGATACAAGTGGTATCACTGGATACTTCCCCTAGA
GCTGCACATAGTTTTGGATGTACATCTTCCCATTTCGTTTTATTTTTTCGGGGAACATCTTCTTAATTTTCCCTTTTTGA
AAGGTATCTTCCCAATTTTCATTAGATAA------AAAATTAGGATATTCCTTTTCTAAATAAAAACCTTCCAGTGGAAT
TAGA---------TCCCTATTTGAGACACAGAGTGTTGCTCCAGTTCTGCAAGAGTTAATTTAACTATTCCTGTACTTCG
AAAGCTTTGTTCTGTGGATGGCGGTTCTACCTATCCATGGGA--------------------------------------
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>chr6D_1
TCTAATCCTCAAATTGATTCGAGGCACTCAACGGTAAAACTCGTT------CACGCATGATAAAAATGTAACCTTGTCAC
CCCGGGGAGATGACAAGAATCTATGTTGAAGCTCCATCAACTTCATCCCACCGGACAAATTCGAGGTGGATCGGAGCCCG
AAAGGCCATCTTGGCAATGAAGCAATGCCATTTGTTGAGCGCGGCCTCTGCGAGGACCACACCATCCTCACACGCTTCCG
AGCGGTTCGAAGCACCATTAAAACAAAAGCGGTGTGGGG-AGACTTCATTCCATGCAAACGGCTCCACCATTGT---GCC
GCCATCGATCAAAGGCAAATCCTTAGCTATTCCTACCCCTATTGCTACTGGACCGAACCCCTGG-TCCTGTTGCACCGAC
CACCGCCAGAGCGACAGAGGGGGGGAGGGAGCCCGTGGTCAACCCCAGTGAGGCAAGGTGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA
TTCGCTCTGGTCTCGCAAGACGAGAAGATTGAAGCATGCGTAGTTGAAACAATATTTCAAAGTGATTTACAGAAAATCAA
GTGAGTTGGTTAATTAGATTAAATAACACGCCTCTCAGGTATCAGTTGTGTACGCATAACATAACCAATCTAGTTGCTCG
CATCCTGTTTCGAAAAAAGAATCGTCTTGCACCAACTTTATTCTCCATCAGGTTGAAACTTTGCATCTCGAGCCAAGCGG
CCGATTCTCGACTAGGTCCCTATACCAGACGATTGTTCCCACCCCTGGCCTGGTGAAACTATCGGTGCTTTGGGAGATCA
AACTCCCCCTGAAAATCCGCATATTTCTCTGGCAATGGGTCCGAGGCCGGCTCCCCTCAGGCACGAAGGTCCGAAAACGT
AATGGTCCTGGGGACGGCCTCTGCCCCATTTGTATGGTACCGGAGGATTGCAACCACATCTTCTTCCGGTACCCTGCGGT
GCAGTTCCTATGGAGTTGCTTCCGGGAGGTGGTTGGCGGCAATTGGTGCCACGACAACCTCCCGGACTTGTTTGGGGAGG
CCTTTAGTCTCCCCGGTCCTAGTCGACCCCTCCACTTGGGTGGCTTTGGGTACCCTGGCTTGGACCCTCTGGTGTGCCCG
CGATAAACTAGTCATCGAACGCGTGATTCCGTGCCGTGGGACTGACGCAATTTATAAAAATGTGTGGCTTCTTACAGCTC
TGGAGACCGCTAGCAAGCGGCGCGACCGAGACATCATCAACAACATCATTGCGGGTCTTCGTTCCTCGGCATCGGCTTTT
GCTCCACCACCGCCACCGCCACCGCCACCACCACCACCACCACCTCCCGAGCCGGATTAGCT------------------
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-------------------TTTTCAGATTTGTTTAGGGCTTGTCCTGCTGTGCCCCCAGCGTGACTTTATGACTTGATTG
TATTTTGTACTGATGTGTTAGATGCTTGATTCGTTGCTTTATAATATAAAG-----------------------------
---------------------------------------------------------CGGGGAAACCCTTTTTCTTAAAC
TTAGCAAAATTAAG------------------------------------------------------------------
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---------------------------------------ATCAGCTCCCAGCACCACCCGGCCACCCCTTGAAAAAACCA
CGCCACAGTACACAGAT-AACTCGTCTGCCTCTACCAACTTTTCGTTTTGAGTTTCTGCCGCTACTCAAAATAATGTCCA
GATATACCCATCCCACGTGGTCCATCAAGTTGGTTTCTGGTGGGCACAAACCTGGGGGCACACAGCTCAGCCACCGTGTG
TCCCACTAAGCTTCCATGCACTCTCCCAGCCTCCCTCTCTCCCGTATAAATCCACCACACCTTCAACCCCAACATCGCAC
ACACCTCCATTGATCTTCGGT---GCAGACACACGAGCACACCACACAGACCCACAC-CACACCACACGTCAACACAGAC
CATGAGGAATGCGGCACTTGACGCGCAGATGAACAGCGGCGGCGCCTCTTCGTCGCCCATGATCCCGCCGCCGTTCTGGT
CGACGCCGACGCCGTACCTCTTCATCGGCTTCGCGGTGGTGATGAGCCTCATCGCGGTGGCGCTGGCCGTGCTCCTCTGC
TCCCGCCGCAGGGAGGGAGGCCGCGAGGACGAGGAGGCGGTCCCGGCCGGGATGATGTCTGTGCGCGTGCTGACGCCGCT
GGACAGGGAGGTGCCCAAGGTGGTGGTGGTAATGGCCGGCGACGACATGCCGTCCTTCCTCGCCAGCGCCACGCCGCTCG
CCTTCGCCGAGGCGGCCAAGGTGCAGCGCCCGTACTGCCAGTGCGGCGCCAAGGACGTCGCCGCCCCCGTATAGCTAACT
GTGGCTCTCGCGCGCCGCCGATCGACGCCGCAATATATATGTGTA--TCGATCAAATCGAATGGGAGGAGTTAAATTTTG
TTTCTGTTATATAGATTAGTTCT--------CATCATTTTCCTCCCTAATT-----AGTAGTTTTGGTGCAAGG------
ATGCGACGCTGTGGCCTTGTCGAGGTGGCTTAATGTTCAGAGCTTCAGAGCATGTAGCGAGTGCCGAGTGCGCAATTAAT
ATGCTAATTTGGTTGCATATAAGATTTCCTGTTCTGCAGACACCTTTTTTCCCGAAACATATAATTGTGAGAATTATTTG
GCTTTTAGCTAGTTCTGCGACAGACATCTGCTCTGATGGAATTTGCTATTTTCTGGTCGTCTGACCTAAAGATATATCAA
GTTCCATTTAAGTCATCAAATTGCAAATCATAATCTTGAAGTGGCACAC-AAACATGTGTACAAATTCAGATAAAGAAGT
GTGCAAGAATCGATTTGCAGATATTTAAACCGGGAGAGTATATACTCATACAAGTGGTATCACTAGATACTTCCCCTAGA
GTTGCACACAGTTTTGGATGTACATCTTCCCATTTCG-------------------------------------------
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>chr4A_2341
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------------------------------------------------------------------------TAAGGGTC
TGTCTAGGCCTTATCTAGATGTGACATAGTTATGTCACATCTAAGCTGATATCATCACTTTTTTTAGTAGATGTCATCAC
CTGTTTGTGACCTTTTCTTTGTTTGTTGTTCTTTTTCTTGTCCAGCCCAGCGTGACATTATTTTTTTAGAATCACGTAGC
ATCAGTGGTAGCATTCAGCATGACTAAAGGAGAG--ACCCAGATCGTGCTTGCAAGGGCCACGCCTAGCGCGCCTCCGTG
CTCGCTAA---TACGATCGCTACCTCCGGTAGCCTAGCCGTACGCAGTAGTACACTTTGTG---------------TTTT
--------------TTCCTTTTTATGATTTTTATTTTTCTCTTTCAGGTTTAGTTGTTCTTCGAGTTTTCTTCCATTTTT
TATTT-TTTATACTTTTTGTATTATAAAGATTATTCTAATATATGTTCAACATTTTTTTAAATACAAATTAAACATTTTT
TAATATATGGAGA-------------------------------------------------------------------
----------------------------------------------------------------------ACATCTTTCT
TTTCAAATACACATTGAACACTTTTT----ATAGGGTGAACAT-TTTTTCAAATACACACTGAACAAAATTTAATATATT
ATGATTTTTTTTAATATAGATTAAACTGTTTTTATAT---------------------------GTATGGTGAACTTTTT
TTAATATACACAGTAAACCTTTTACGAATACACACTGAACAATTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTAAAATA---------------------------AAAAACTAGT--AAAAACCAGAAAAAAAATTCATGTATTCAAAA
AATGTACAGGGTTTTAATAATGTTCATGATTTCAAAAAT-TGTTTGTAAATTCAAACAATGTTCACAAAAATCAAAATAA
ATGTTTATGTATTCAAGCTCTTCGACGAACAAAACGCGCAAGACCGTCGTTGATTCACAAGCAAAAGATGAGTTGCGAGT
TGAGGATGGACTTGCAACTGGGGCAACTACAATTACAAGCCCAGTTGCGAGTCGATTAAGGAATTGTAGTTGGAACA
>chr3D_2418
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---------------------------------------------------------------------GATGTCATCGT
TTGTTTGTCGCCTTTTCTTTGTTTGTTGTTCTCTTTTTTGTCCAGCCCAGCGTGACATTATTTTTATAGAATC-------
------------ATGCAGCATGACTAAAGGACAGTCACCCAGATCATGCTTGCAAGGGCCACGCCTAGCGCGCCTCCATG
CTCGCTAACTGTACGATCGCTACCTCCGGTAGCCTAGCCGTACGCAGTAGTACATTTTGTGTTTTTCTCCTTTTGTTTTT
--------------TTCCTTTTTATGATTTTTATTTTTCTCTTTCAGGTTTAGTTGTTCTTCTAGTTTTCTTCCATTTTT
TTATTCTTTATACTTTTTGTATTATAAAGATTATTCTAATATATGTTGAACA-TTTTTTAAATACAAATTAAACATTTTT
TAATATATGGAGAACATCTTTTCTTTGTGATCAATATTTGTTTATGCGACATTAGCGAGAATTCCAGATACGGGCTCCAC
ACAAGAGTCGAACTCTGGTTGTTGCCACAACACTGCGATCCCAACCATTGGGCTACTGCCCTGTCCTCAAACATCTTTCT
TTTCAAATACACACTGAACACGTTTTTTTCATAGGGTGAACAT-TTTTTGAAATACACAGTGAACAAAATGTAATATATT
ATGAATTTT---------------------------T---------------------------GTATGGTGAACTTTTT
TTAATATACACAGTAAACCTTTTACGAATACACACTGAACAATTTTAAATTGCATGCGGAACATTTC-------------
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--TAAAATA---------------------------AAAAAACTAGTAAAAAACCAGAAAAAAAAATCATGTATTCAAAA
AATGTACAGGGTTTTAATAATGTTCGTGATTTCAAAAAAATGTTTGCAAATTCAAAAAATGTTCACAAAAGTCAAAATAA
ATGTTTATGTATTCAAGCTCTTCGACGAACAAAACGCACAAGCCCACCGTTGATTCACAAGC-AAAGATGAGTTGCGAGT
TGAGGATGGACTTGCAACTGGCGCAACTACAATTACAAGCCCAGTTGCGAGCCGATTACGGAATTGCAGTTGGAACA
>chr4D_2560
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-----------------------------------------------------AAGGGCCACGCCTAGCGCGCCTTCATG
CTCGCTAA---TACCATCGCTACCTCCGGTAGCCTAGCCGTACGCAGTAGTACACTTTGTGTTTTTCTCCTTTTGTTTTT
--------------TTCCTTTTTATGATTTTAATTTTTCTCTTTCAGGTTA----GTTCTTCTAGTTTGCTTCCATTTTT
TATTT-TTTATACTTTCTGTATTATAAAGATTATTCTAATATATCTTGAACA-TTTTTTAAATACAAATTAAACATTTTT
TAATACATGGAG--------------------------------------------------------------------
---------------------------------------------------------------------AACATCTTTCT
TTTCAAATACACATTGAACACGTTTTTT--ATAGGGTGAACAT-TTTTTCAAATACACATTGAACAAAATTTAATATATT
ATGATTTTT---------------------------TTTAATATATATTAAACTGTTTTTATATGTATGGTGAACTTTTT
TTAATATACACAGTAAACCTTTTATGAATAGACACTGAACAATTTTAAAATGCACGTTGAACATTTC-------------
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--TAAATATATATATATATAAATCGAAGGCTAAAATAAAAAACTAGTAAAAAACCAGAAAAAAA-TTCATGTATTCAAAA
AATTTACAGGGTTTGAAAAATGTTCGTGATTTCAAAAAT-TGTTTGCAAATTCAAATAATGTTCACAAAAATCAAAATAA
ATGTTTATGTATTCAAGCTCTTCGACGAACAAAACGCACAAGACCGTCGTTGATTCACAAGCAAAAGATGAGTTGCAAGT
TGAGGATGGACTTGCAACTA-GGCAACTACAATTACAAGCCCAATTGCGAGTCGGTTAAGGAATTGCAGTTGGAACA
>SNPs
------------------------------------------------------S----------S--------------
---S------------S---S--S----------------------------S---------S------S----------
-----------S------------------------------S-------------------------------------
--------SS------------------S-----------S------------------SS-------------------
-S-------------S--------------------------S-------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
-------------------------------------------------------------SSSSSSSSS----------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------S----S------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
S------------S---S---------------S----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S------------------S---------------------
---------------------SSS-------------------------------SSS-----------S--S-------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S---------------------------------------S-----------------S--
------------------------------------S-------------------------------------------
-------S--------S---------------------------------------------------------------
------------------S---------------------S---SS----------------------------------
-----------------------S---------------------------SSSSS------------------------
--------------------------------------------------------------------------------
-------------------------------S-----------SSS----------------------------------
-------------------------S------------S----------------S--S---------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------------------S----------------------------------S--------S--
-----------------------------SSSSSS-----------SS-----------------S-S-S----------
----SSSSSSSSS-------------------------S---------S-S----------S-----------------S
------------S-----------------------SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
---SS------S----------------SS----------S-------------------------S-------------
--S-------------S-S-------------------------------------------------------S-----
--------------S----------S------------------------------------------------------
--S-----------------------------------------------------------------------------
SSSSSSSSSSSSSS------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S--------------------SS------------------------------------
--------------------------------------------------------------------------------
----------S--------------S------------------SS--S-S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-----S---------S-----------------------------------
---------------------------------------S-------------------------------------
>forward_2914
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GATCAACTCCTCCGCCTCTG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_4471
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AGTAAGGGTC
TGTTCAGGCC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
