>input_sequence_58751
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----------------ATGGCGCTCCTCCTGTCCCCCACCGTCTCCTTCATCGCCCCCTCCCCCTCTTCCGCTCCTCGTG
CCCGAGCTCTCTCCAGCTCCACCGCCA------CCGCCGCCAGCAATAATGCCTTCCCTTACCTCGGTAAGCTGCCGTTA
TGCCTCATCCCGCCATTGTCCCGTACGTTCGTTGATGTTCCATGGCTAAGT--------------GCTTACTGGGTGATC
CCTTGTTGCGAAGTCCGATGACGAAATCGGTGGAGGAATTAGTTCGGGCGTGCATAATTTTAGTCGCGGCATCTCTGCTT
GTCCTCGATGGGAATGGCTCGTCCGGGAATT------TATTCAAACAATCTGTCTGCACCAGTTTCTTGGAAGAATGTTC
ATTTTTCTCTGCTAGACTACATTT---ACTACCTCAGAAGGTTGCTCCTTTCAAACTTAGTGCTACT-------------
ATAAATTGTCTTATGAGCATAGGCCACCGTTACGGACACTTGATG-------AAATCCGTAAGCACACCGTGGCAGCTCG
CAGTTTGCAGGTTGCTACAGACGAGTAATTGAGTTTAGATGCCATATGTTTTCTCTAGCAGCTCCATCTAATGATAGTAG
CGAGCACACTAAAATTAGCTACTGCGCATTACATGTGCTATGAGCAATGTGACATACATGAGCTCAGCATGTCAATGTGT
ACATCACTGTAAGCATAGACAGGCCATATCTTTTCTGTAGCAATTCCATCTGATGATAGTAGAGAGCACAATAAATTTAG
CTACTGCACGTTACATATGCTACGAATCATGTGACATACATGAGCTCAGAATTTAAATGTTTACGTC-----AGTGTAAG
CATAGATCCTACTAAGTGTTGTTTGTCATTGCTCTTC-TTGTAGCCTCGAGACTTCAGTGCAAGACCGGCGCCTCAGTCA
GCCATGTTTCTCTTGCCAAGAAAATGCCCGTAGTTGTCCACGCCTCTGCAGAGGCTGGTGCAACTGATACCGCGGAGCAA
CCAGAGAAGCCAAAACCAGCGGCTTCGATCGAGGACATGCCGCTCGAGTCCAAGCAGCAGATGATCCTGGAGCAGAGGGC
ACGGATGAAGGTGGCCAAGAAGTTGAGGCAGCGGCGCAAGCGGCTCGTCCAAAAGAGGCGGCTGAGGAAGAAGGGCAGGT
GGCCACCGTCCAAGATGAAGAAGCTCAAGAATGTCTGA------------------------------------------
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------------
>chr3D_1_TraesCS3D01G194000
TTCCATGCCGTCGATCCGTCGCGCATGAGCTTCTCATGGCCTTTTGTTCTGTTTTGGTGAAATGTCGCACGACCAACCTG
TGATCTTGCACGCTCCCTCTTTGTGCCAGTTGCCGCTATCCAGTCAGCAACCAT-AAGAGAACATATCATCTTCGGCGTC
CATGATCTTACTCTTG-GACTCGAAGCTCGAATCCAATGATGAATTGTCCAAAAATGGCTCTACTAGTGGATCTATCTAC
ACAGAATGT-AATCCTATGCCATCTACATGAGCTATGAGCCGCTAAACTAAATTTACAAGAAAAGTTGGCAAAATCCACC
TCGGGGTAAG----------------------------------------------------------------------
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-------------------------------------------------------TCGTCGAACACCTTGAGATCGAGCG
GTGGAAGGAGTGGCACGACCAGATGGCGAGAGATAGTTGTGGGGCTGCAGCGAAGTATGGGAAGTCCACGAACGGCTCAT
AGCGGTACGGGCAGCGGGGGTAACAGCAAATGGCGGCGGCTAAAGAAAGTGTATCTCCTGAAATGTGAAATGTCTGTGGT
ACCAATACTTGGATGGATGGAGGGCTCGTTATATCGCCTCGTCCAGCCGCCAAATATGAAGGCTAGCTGGCTGATATGGG
TCTATGTTAGAGTTGCTCTTAGCGGTTAGAAACGTTTTGGTATGCTCTTATACACTATCTAAAATGCATATCAAGCGGGC
ACCTTTGGTGATATTTGTGCAACCGAGAAACCCTAAAACAATAGCCAAGCAACATGTTACAACATGTGCGCTTGCATAGA
ATTGTTGAAAAATAATACGTCCACTGTAAAATGAAATCAAATGCTGTGATATTAAGCTAAAA--ATA-TATATGAAATGA
TGTGATTTTTTGTTTTCTTACGTGAG-----GAGCATCTCAGGCCTTTTCAAGCGCGACTAACTCTGTCCGTTGATTTCT
GATCAGACCGCAGCGCACTCTCCCTGTACAGGCTTATCCCTCCAGCAGAGGTGGCCTTCCTCCGCATAGGATAGGCCAGA
ACCCAAATCCACAGCCATGGCGCTCCTCCTGTCCCCCACCGTCTCCTTCATCGCCCCCTCCCCCTCTTCCGCTCCTCGTG
CCCGAGCTCTCTCCAGCTCCACCGCCA------CCGCCGCCAGCAATAATGCCTTCCCTTACCTCGGTAAGCTGCCGTTA
TGCCTCATCCCGCCATTGTCCCGTACGTTCGTTGATGTTCCATGGCTAAGT--------------GCTTACTGGGTGATC
CCTTGTTGCGAAGTCCGATGACGAAATCGGTGGAGGAATTAGTTCGGGCGTGCATAATTTTAGTCGCGGCATCTCTGCTT
GTCCTCGATGGGAATGGCTCGTCCGGGAATT------TATTCAAACAATCTGTCTGCACCAGTTTCTTGGAAGAATGTTC
ATTTTTCTCTGCTAGACTACATTT---ACTACCTCAGAAGGTTGCTCCTTTCAAACTTAGTGCTACT-------------
ATAAATTGTCTTATGAGCATAGGCCACCGTTACGGACACTTGATG-------AAATCCGTAAGCACACCGTGGCAGCTCG
CAGTTTGCAGGTTGCTACAGACGAGTAATTGAGTTTAGATGCCATATGTTTTCTCTAGCAGCTCCATCTAATGATAGTAG
CGAGCACACTAAAATTAGCTACTGCGCATTACATGTGCTATGAGCAATGTGACATACATGAGCTCAGCATGTCAATGTGT
ACATCACTGTAAGCATAGACAGGCCATATCTTTTCTGTAGCAATTCCATCTGATGATAGTAGAGAGCACAATAAATTTAG
CTACTGCACGTTACATATGCTACGAATCATGTGACATACATGAGCTCAGAATTTAAATGTTTACGTC-----AGTGTAAG
CATAGATCCTACTAAGTGTTGTTTGTCATTGCTCTTC-TTGTAGCCTCGAGACTTCAGTGCAAGACCGGCGCCTCAGTCA
GCCATGTTTCTCTTGCCAAGAAAATGCCCGTAGTTGTCCACGCCTCTGCAGAGGCTGGTGCAACTGATACCGCGGAGCAA
CCAGAGAAGCCAAAACCAGCGGCTTCGATCGAGGACATGCCGCTCGAGTCCAAGCAGCAGATGATCCTGGAGCAGAGGGC
ACGGATGAAGGTGGCCAAGAAGTTGAGGCAGCGGCGCAAGCGGCTCGTCCAAAAGAGGCGGCTGAGGAAGAAGGGCAGGT
GGCCACCGTCCAAGATGAAGAAGCTCAAGAATGTCTGACCGGCACATGATGTCGGACAGCTGGTCCGTACCATTCCTTTG
TAAACCTACGTGTTGCGTTCCTCTAATGCATTGGTGTTTGTTTGGTTTGTACAATTTTTCTGTTCTGAAACACATAATCG
GTTATAATGCAATTAAATTTTTACCAT------AATGAAACCTTTTTGCGTGTCCATAGCAGCAGATTGATGTGCTGTTA
TCTGTGGTTAGTCTATGTTGTACAACTGTCTGTCTGAAGCAAGTTTTGGGATGTTTTATTTCTTTTGCCGTTTGTTATTC
TGTAAATTTTTAATTTATTTCAAATATGCTATTGGAATGCCGACTAGTCCTTGGACACCATCTTCCCTCAAATATGCAGT
GGCTTAAAACTTGAAAGGAACATCGGTCCTTTGTCGATAACAAAAATATCAGTTTTCAGACAAGTCTCGTGCTTGCTGAA
AGTCTGCTCTTTCAGACGAGTTTCCACTGGCTTTGATAGCTCAAAGGAATCTCCGTTTGCTTGCTCACTTGGTTACGCTG
CCCAGTATGTGAATACTGCACCCAGCCCTCTCCTTTGTGGCCCTTGATGCTCAAGGAAGGAACAACAGGAACAACAACAA
CAACAACAACAACAATGTACGCCCCCTCAAACTCTTTACAGTCATCTACTACTTCTAAGTTCAATTTTAACTGAAAT-AT
TTTTTTTATCTGTCTATTTATAACATTCATCGTCTGGATCTTCGGATGCATCAAGTTCCCACTGAAATAATAACTGAAGA
ACAGGAACACCATGACTTAAGTTGATTCTGGGTCTGCTTGGTCAGTCAGTACTCAGTAGGCAGGCCTGAAACATAATGGC
AGGCAGGCGGAATAGGGAGAACTGGATGCGGCATTGTTATGGAGCAAAAAAGCTTTTGCTCATGTGCTGGCACTTGACAC
TCTTAAACCTCACATCCCTCCCTTGTACTTTCTCCCTTTGCTCCCCACCATC-------CAGTGGCAATGAATTTCTGAT
TGCGATCCCGTC
>chr3B_18
-----------------GTCGCACATGAGCTTCTCGTGGCCTTCTGTTCTGTTTTGATGAAATGTCGCACGACCAACCTG
TGATCTTGCACGCTCCCTCTTTGTGCCGGTTGCCGCTATCCAGTCAGCAACCATCAAGAGAACATATCATCTTCGGCGTC
CATGATTTTACTCTCGGACTC--AAGCTTGAATCCAATGATGAATTGTCCAAAAATAGCTCTACTAGTGGATCCATCTAC
ATAGAATGTGAATCCTATGCCATCTATATGAGCTACGAGCTGCTAAACTAAATTTACAAGAAACGTTGGCGAAATCTACC
TCGGGGTAAG----------------------------------------------------------------------
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-------------------------------------------------------TCGTCAAACACCTTGAGATCGAGCG
GTGGAAGGAGTGGCACGACGAGATGGCGAGAAACAGTTGCGGGGCGGCAATGAAGTATGGGAAGTCCAGGAACG------
----GTCCGGCCAGCAGGGGTGACACCAAATGGCGGCGGCTAAAGAAAGTGTGTCTCCCA-------AAATGTCTGTGGT
ACCAATACTTGGATGGATGGAGGGCTCGT-------CCTCGTCCAACCACCAAATATGAAGGCTAGCTGGCTGATATGGG
TCTATGTTAGAGTTGCTCTTAGCGGTTAGAAACGTTTTGGTATGCTCTT--ACACTATTTAAAATGCATATCAAGTGGCC
ACCTTTGGTCATATTTGTGCAACCCAGAAACCCTAAAACAATAGC--------ATGTTACAACATGTGCGCCTGCATAGA
ATTGTTGAAAAATAATACATCCACTGTAAAATGAAATCAAATGCTGTGATGTTAAGCTAAAAATATAGTATATGAAATGC
TGTGGCTTTATGTTTTCTTACGTGAGGAGCAGAGCATCTCAGCCCTTTTCAAGCGCGACTAACTCTGTCCGTTGATTTCT
GATCAGACCGCAGCGCACTCTCCCTGTACAGGCTTATCCCCCCAGCAGAGGTGGTGTTCCTCCGCATAGGATAGGCCAGA
ACCCAAATCCACAGCCATGGCGCTCCTCCTGTCCCCCACCGTCTCCTTCCTCGCCCCCTCCCCCTCCTCCGCTCCTCGTG
CCCGAGCTCTCTCCAGCTCCGCCGCCAA---------------CAATAATGTCGTCCCTTACCTCGGTAAGCTGCCCTTA
TGCATCATCCTGCCATTGCCCCGTACGTTCGTTGAGGTTCCATGGCTAAGTAGTACTGTATTAGTACTTACTGGGGGATC
CCTTGTTGCCAAGTCCGATGACGAAATCGGTGGAGGAATTAGTTCGGGCGTGCGTAATTTTAGTCGCGGCGTCTCTGCTT
GTCCTCGATGGGAATGGCTCGTCCGGGAATTTCAATTTCTTCAAACAATCTGTCTGCACCAGTTTCTTGGAAGAATGTTC
ATTTTTCACTGCTAGCCTACATTTACTACTACCTCACAAGGTTGCTCCTTTCAAACTTAGTGCTACT-------------
A---------------GCATAGGCCACCGCTACGGACACTTGATG-------AAACCTGTAAGCACACCGTGGCAGCTCG
CGGTTTGCAGGTTGCTACAGACGAGTTATTGAGTTTACATGCCATATGTTTTCTCTAGCAGCTCCATCTAATGATAGTAG
CGAGCACACTAAAATTAGCTACTGCGCATTACATATGCTATGAGCAATGTGACACACATGAGCTCAGAATGTCAATGTGT
ACATCAGTGTAAGCATAGACAGGCCATATCTTTTCTGTAGCAATTCCATCTAACGATAGTAGAAAGCACAATAAATTTAG
CTACTGCACATTACATATGCTACGAATCATGTGACGTACATGAGCTCAGAATTTCAATGTTTACATCGGTGTAGTGTAAG
CATAGATCCTACTAAGTGTCGTTTGTCATTGCTCTTC-TTGTAGCCTCGAGACTTCAGTGCAAGACCGGCGCCTCAGTTA
GCCATGTTTCTCTTGCCAAGAAAATGCCCGTAGTTGTCCACGCCTCTGCAGAGGCTGGTGCAACTGATGCCGCGGAGCAA
CCAGAGAAGCCAAAACCAGCGGCTTCTATCGAGGACATGCCGCTCGAGTCCAAGCAGCAGATGATCCTGGAGCAGAGGGC
ACGGATGAAGGTGGCCAAGAAGCTGAGGCAGAGGCGCAAGCGGCTCGTCCAGAAGAGGCGGCTGAGGAAGAAGGGCAGGT
GGCCACCGTCCAAGATGAAGAAGCTCAAGAATGTCTGACCGGCACATGATGTTAAACGGCTGGTCTT-------------
TAAACCTCCGTGTTGCGTTCCTCTAATGCATTGGTGTCTGTTTGGTTTGTACAATTTTTCTGTTCTGAAACACATAATCG
GTTATAGTGCAGTTAACTATATTACCATAATGAAATGAAACCTTTTTGCGTGTCCATAGCAGCGGATTGATGTGCTTTTA
ACCAATTTTAGTCTATGTTGTACAACTGTCTGTCTGAAGCACGTTTTGGGATGTT----------------------TTC
TGTAAAATTTTAATTTATTTCAAACATGATATTGGAATGCCGACTAGTCCTTGGACACCATCTTCCCTCAAATATGCAGT
GGCTTAAAACTTGGAAGGAACATCGGTCCTTTTTCGATAACAAAAACATCAGTTTTCAGACAAGTCTCGTGCTTGCTGAA
AGTCTGCTCTTTCAGACGAGTTTCCACTGCCTTTGATAGCTCAAACGAATCTCCGTTTGCTTGCTCAGTTGGTTACGCTG
CCCAGTATGTGAATACTGCACCCAGCCCTCTCCTTTGTGGCCCTTGATGCTCAAGGAAGGAACAACAAG---------AA
CAAGAGCAACAACAACGTACACCCCCTCAAACTCTTTACAGTCATCTACTACTTGTCAGTTCAATTTTAACTGAAAATAA
ATTTTTTATCTGTCTATCTATAACATTCATCGTCTGGATCTTGGGATGCATCAAGTTCCCACTGAAATAATAACTGAAGA
ACAGGAACACCATGACTTAAGTTGATTCTGGGTCTGCTTGGTCAG-------TCAGTAGGCAGGCCTGAAACAGAATGGC
AGGCAGGCGGAATAGCGAGAAGTGGATGCGGCATTGTCATGGAGCAAAAAAGCTTTTGCT-ATGTGCTGGCACTTGACAC
TCTTAAACCTCACATTCCTCCCTTGTACTTTCTCCCTTTGCTCCCCACCATCTCATCTCCAGTGGCAATGAATTTCTGAT
TGCGATCCCGTC
>chr3A_21
--------------------GCGCATGAACTTCTCGTGGCCTTCTGTTCTGTTTTGGTGAAATGTCGGTCGACCAACCTG
TGATCTTGCATGCTCCCTCTTTGTGCCGGTTGCCGCTATCCAGTCAGCAACCATCAAGAGAACATATCATCTTCGGCATC
CATGATTTCACTATCAAGACTCGAAGCTCGAATCCAATGATGAATTGTACAAAAATAGCTCTACTGATGGATCCATCTAC
ACAGAATGTGAATCCTATGCCGTCTACATGAGCTATGAGCCGCTAAACTAAATTTACAAGAAAAGTTGGCGCAATCTACC
TCGGGGTAAGGCCATCTCCAGCCGCGCCCCCAAGAAGGCCCTCCAGGCGTTTTTTCGTTCGCCGGCACCAAAAAATCGGC
CCAGTCGCGCCCCCAAGAGCCCAATTTTCGCCGGCTCGGGCCGAAATTGGCGCCGGCGGACCCAACCCGAACCCGGCGCG
CTGGGGGTCGCTCGGGGGCGCCGGGCGAATCGTTTTTGGCGCGAAGAGCCGTGGGCCCGCCGCGTCAGCGACTCTACTCT
CTTCTCGCCCCTTCGTCGTCCTCATCGCCTCGTTTCCCGCGGCGAATCAATGCCAAAGCTGCCGCGTGCTGCCGCGCCGG
TCAGCCTCCATTGATGCCTCACGGCTGGCGCAGTGAAGGTTGGGCGACGCGTCCCTTGGCCGCCACACGTAACGCGCCGG
CCAAGCCTACCACGCGGCGTCTCTGCCTATAAAAGCCGACTGCAAGCGCGCCGGAGAGACTCACCCCGATCATCCACCGG
CGACGCGCTCATTTCTCCCCCTTTCCTCCTCATGCTGTCACCAGTTGAGAAAGCATGGCCGAGCGTTTCTCAGGCGATGG
CGCGGCGGCGAAGGGTTTCGGGCGCCGTCATCTGCACGAGGACGAGGCTCGCCTCCTTTTCAAGGCCGAGTACCCGGTCC
CGCCGGACATGCGGGTGCCCGGGGCGTGGAGGATCAGCGCCGGCGGCGCGGCCTGCGGAGATCGCACGCATCCGCTCGTC
CCTGTCGCGTGCGGCGAGGGAGGGGCCCCGGTACGTCCCCGACAGCCCAATCTGGGAGTCGTACTTCCGTCGCCGGCACG
ACGAGCAGTTCGAGGCCACCAACAACGTCGTGCCCTCCGGCAGGTTCAACGCCGCCGACCGGCGTCGGTGGTGGTGCGTG
CTCGGGCGCACGTTGGAGTCTGTCCTCGAGTACATCGATGGCGGCAACACGCCGCGCCTCGAGTACCCCGCTCCCCCGTC
CTTCTCACGCCGCCGGGGAAGCTCCTGGACGCCGAGGCGCATGGAGACCGGGGTGTCCTCCTCCTCGTCCGACGGCTCTC
CCTGCCTCCACCTCCGCCCCGTCAAGCCGGAGCCCCAGGACACGCCTGTCAGCGCGCGTACCCGCAGCTCCGGCGCCCTC
GTCGAGCCCAAGGTGGAGTCCAGCCTCCCTCCGGAGTACGAGGAGATAGCCCGGCGCGGCTTCTCCGACGAGGACGCCAT
GCGGTGGTCGCGCGACGACTACCTACGCGAGGAGATGATCCGGCAGCGCCGGGCCCTGGAGGAGATCGCCGCCCGCAAAC
GTGGCCGCGAGGACGAGGACGGTGTCGTCGTCCTCGATAGCGACGACGACGACGCCCCCGGACCGTCCAACCCGCCGCGC
CAACCGGGGAAGGGATGCAGCAGGAACGGCGAAGGCGTAGGCCGGGGCGACGACGACGACGGCGGCGGTGACTACACGCG
GTTCTACAGCCCCCTCGGCATGTAGAACCGCGTGGGCGGGCGGCGAGGCGGGCGGCGAGGGAGACGGCGGGGGTAGCCCG
CGGTAGTTTTTTTCTTTTTTTTGTAAAATATGTTTAAATTTGAACGAACTCGCCCGTGTTTGCGTTGTGTTTGCGCCGAA
TTTGAACATTTTAAAAACCCGTCGGGGGCCGCGACTGGGGAGCATCACGTCCCCAATGCGCGGTTTAGCGCCGGTGCGTC
CCCGGGGGCAATTTTTTGCCCCTCCTGGGGGGCCAACGGCTGGAGATGCCCTAAGTCGTCGAACACCTTGAGATCGAGCG
GTGGAAGGAGTGGCACGACCAGATGGCGAGAAACAGTTGTGGGGCTGCAGCGAAGTATGGGAAGTCTAGGAACGACTCAT
AGCAGTCCGGCCAGCAGGGGTGACACCAAACGGCGGCGGCTAAAGAAAGTGTGTCTCC-------TGAAATGTCTGTGGT
ACCAATACTTGAATGGATGGAGGGCTTGTTATATCGTCTCGTCCAACCATCAAATATGAAGGCTAGCTGGCAGATATGGG
TCTATGTTAGAGTTGCTCTTAGCGGTCAGAAACATTTTGGTATGCTCTTG--CACTATTTAAAATGCATATCAAGTGGCC
ACCTTTGGTGATATTTGTGCAACCGAGAAACCCTAAAACAATAGCCATGCAACATGTTACAACATGTGCGCTCGCATAGA
ATAGTTGAAAAATAATACGTCCACTGTAAAATGAAATCAAATGCTGTGATATTAAGTTGAATATATA-TATATGAAATGC
TGTGCTTTATTGTTTTCTTACGTGAG-----GAGCATCTCAGCCCTTTTCAAGCGCGACTAACTCTGTCCGTTGATTTCT
GATCAGACCGCAGCGCACTCTCCCTGTACAGGCTTATCCCTCCAGCAGAGGTGGCCTTCCTCCGCATAGGATAGGCCGGA
ACCCAAATCCACAGCCATGGCGCTCCTCCTGTCCCCCACCGTCTCCTTCCTCGCCCCCTCCCCCTCCTCCGCTCCTCGTG
CCCGAGCTCTCTCCAGCTCCACCGCCACCGCCACCGCCGCCAGCAATAATGCCTTCCCTTACCTCGGTAAGCTGCCGTTA
TGCCTCATCCCGCCATTGTCCCGTACGTTCGTTGATGTTCCATGGCCAAGT--------------ACTTACTGGGTGATC
CCTTGTCGCGAAATATGATAACGAAATCGGTGGAGGAATTAGTCCGGGCGTGCGTAATTTTAGTCGCGGCGTTTCAGCTT
GTCCTCGATGGGAATGGCTCGCCCGGG------AATTTATTCAAACAATCTGTCTGCACCAGTCTCTTGGAAGAATGTTC
ATTTTTCTCTGCTAGCCTACATTT---ACTACCTCAGAAGGTTGCTCCTTTCAAACTTAGTGCTACTATAAATTGTTATG
A---------------GCATAGGCCACCGCTACGGACACTTGATGTCTTATGAAATCCGTAAGCACACCGTGGCAGCTCG
CGGTTTGCAAGTTGCTACAGACGAGTCATTGAGTTTACATGCCATATGTTTTCTTTACCAGCTCCATCTAATGAT-GTAG
CGAGCACACTAAAATTAGCTACTGCGCATTACATATGCTATGAGCAATGTGACATACATGAGCTCAGTATGTCAATGTGT
ACATCAG-GTAAGCATAGACAGGCCATATCTTTTCTGTAGCAATTCCATCTAATGATAGTAGACAGCACAATAAATTTTG
CTGGTGCACATTACATATGCTACGAATCATGTGACATACATAAGCTCAGAATTTCAATGTTTACATCGGTGT-----AAG
CAAAGATCCTACTAAGTGTCGTTTGTCATTGCTCTTCTTTGTAGCCTCGAGACTTCAGTGCAAGACTGGCGCCTCAGTCA
GCCATGTTTCTCTTGCCAAGAAGATGCCCGTGGTTGTCCACGCTTCTGCAGAGGCTGGTCCAACTGATGCGGCAGAGCAA
CCAGAGAAGCCAAAACCAGTGGCTTCGATCGAGGACATGCCGTTCGAGTCCAAGCAGCGGATGATCCTGGAGCAGAGGGC
ACGGATGAAGGTGGCCAAGAAGCTGAGGCAGCGGCGCAAGCGGCTCGTCCAAAAGAGGCGGCTGAGGAAGAAGGGCAGGT
GGCCACCGTCCAAGATGAAGAAGCTCAAGAACGTGTGACCGGCACATGATGTCGGACAGCTGGTCCGTACCATTCCTCTG
TAAACCTACGTGTTGCGTTCCTCTAATGCATTGGTGTTTGTTTCGTTTGTACAATTTTTCTGTTCTGAAACACGCAATCG
GTTATAATGCAATTAATTTTTTACCAT------AATGAAACCTTTTTGCGTGTCCATAGCAGCAGATTGATGTGCTGTTA
TCTGTGGTTAGTCTATGTTGTACAACTGTCTGTCTGAAGCAAGTTTTGGGATGTTTT-----TTTTGCCGTTTGTTATTC
TGTAAAATTTTAATTTATTTCAAATATGCTATTGGAATGCCGACTAGTCCTTGGACACCATCTTCCCTCAAATATGCAGT
GGCTTAAAACTTGAAAGGAACATCGGTCCTTCTTCGGTAACAAAAACATCAGTTTTCAGACAGGTTTCGTGCTTGCTGAA
AGTCTGCACTTTCAAACGAGTTTCCACTGGCTTTGATAGCTCAAACGAATCTCCGTTTGCTTGCTCAGTTGGTTACGCTG
CCCAGTATGTGAATACTGCACCCAGCCCTCTCCTTTGTGGCCCTTGATGCTCAAGGAAGGAACAACAAG---------AA
CAACAATGTACGC--------CCCCCTCAAACTCTTTACAGTCATCTACTACTTCTCAGTTCAATTTTAACTGAAAC-AA
TTTTTTTATCTGTCTATTTATAACACTCACCGTCTGGAGCTTCCGATGCATCAAGTTCCCACTGAAATGATAACTGAAGA
ACAGGAACACCATCACTTAAGTTGATTCTGGGTCTGCTTGGTCAG-------TCAGTAGGCAGGCCTGAAACAGAATGGC
AGGCAGGCCGAATAGCGAGAACTGGATGCGCCATTGTCATGGAGCAAAAAAGCTTTTGCT-ATGTGCTGGCACTTGACAC
TCTTAAACCTCACATCC--------------CTCCCTTTGCTCCCCACCATCTCATCTCCAGTGGCAATGAATTTCTGAC
TGTGATCCCGTC
>SNPs
SSSSSSSSSSSSSSSSS------------------S-------S------------------------------------
---------------------------S----------------------------------------------------
------S-------S-----------------------------------------S----------------S------
----------------------------------------------------------------------S-----S---
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-------------------------------S-S----------------------------------S-----S-----
---S--S---S----S-----S---S--------------------------S-----SSSSSSS---------------
---------------------------------------------S--S-------------------------------
-------------------------------------------------SS-------S----------------S--S-
-----------------------------------------------S--------------------------------
-------------------------------------------------------------------------------S
----S-------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S----------------S-------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-----------------------------------------------------S----------------S---------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-SSSSSSSSSSSSSSS-------------S--------------------------------------------------
-S------------------------S----------S------------------------------------------
----------------------------------S--------------------------------S------------
------S--------------------------------------------S-----------S----------------
---------S--------------------------------------------S---------S---------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
---------------------------------------------------------SSSSS------------------
------S-------------------------------------------------------------------------
--------------------------------S-------------S---------------------------------
---------------------------------------------S---------------------S------------
-------------------------------------------------------------------S-SSSSSSSSS--
---------------S----S-----------------------------------S-------------------S--S
--------------------------------------------------------------------------------
---------------------------------------------SSSSSSS---------------------S------
---------------S---------------------S----------------------S-------------------
--------------------------------------------------------------------------------
------------
>forward_2114
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--------------ACGACCAGATGGCGAGAGAT----------------------------------------------
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>reverse_3214
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-------------TGAGCATAGGCCACCGTTAC-----------------------------------------------
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>forward_3014
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----------------------------------GGAATTAGTTCGGGCGTGCA--------------------------
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>reverse_4468
--------------------------------------------------------------------------------
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-------------------------------------------------------------------CTTGGTTACGCTG
CCCAGTA-------------------------------------------------------------------------
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------------
