>input_sequence_58747
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------------------------------------------------------------------------------AT
GGCGCGGGGCTCCAGA------AAGAAGAAGAGGGACACGAGGAGGATGGCGCGCG---GCCCAGTGTCCGAGCTCCCCG
ACGACCTCCTTGTCGAGATCCTCTCGCGCTTGCCCTTCAAGTCCACCCGCTGTTGCATGTGCGTCTC----CACGCGCTG
GCGCGATCTAATCTCCCACCCGGACCACCGCAAGAATATTTCTCAGTCGACCCTCGCCGGCTTCTTCTTTGAAACATGGG
ACACAG------------------------------------------ATCAGGTGTCTCGTCGTTACCAAAGCGTCTCC
GGGAAC---TGGTGCCCTCGCATCAACTCCTCCCTCTCATTCCTGCCCGGATGTGAGAAAC------------TAGACAT
ATTGGACTGCTGCAATGGCCTCCTCCTCTGTAAATGCTGTCAGGACACTGATCGCAAGATAATGGATTACGTGGTGTGCA
ATCCAGCCACTGAGAAGTGGGTGGTCGTGCCTGCCACAAACTGGTCCAGCGAGTCGTGCAAAGTTCGCTTGGGGTTCGAT
CCAGCCGTCTCATCACACTTCCATGTTTTTGAGTTCGTACCTACCTGTGTCTGGGATGGGGATAAGAGTGGTGATCACAG
TCAAAGATGCATCAAAGTGGTGGGAATCTACTCTTCCAAAGCTGGAGTTTGGACACGTCAGCGCGCATGGGACCTTCCAA
TTGAAACAGTCCACTTTATAGGTAGCGCATTTCTGACCGGGATCCTGTATTTAACTTGCAATGATGATTTGGTTGCGACC
ATCGACGTGGATGGAAATTGCAGTTTCGTTCGTGTTCCTAAACCACACTATCAATGTGGTGCTTATGATGTTTATGTGTC
ACGGGGCCATTTGTATTTCGCAAGTTGTGATGCTTCTGAAATATCAATTTGGGTTTTAGAAGATTTTAGTACTGCAAAAT
GGACCTTGAAGCTCAATGTCAGCTACATGCTACTGTTTGGAACAAGGTATACAAGCCATGATGATCATTGTTGTGTTATC
TCAGCTCACCCAGAACATAATGTCATATTC--------------------------------ATCATTGTCAAATATACA
TTGTATTGGCGTTCACTGGTGGAACTATTTTCCTACGCAATAGACTCTAAGGAGCTGCGTTCGATATGTGATCTTGGACG
GGAATCCAGCTCCCCTTATCTTTCATATGTTCCCTTGTTCTCAGAGTCACTGGCAGATGAACACTAA-------------
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>chr3B_1_TraesCS3B01G492000
GCCTCCCCGTTGGGCGGTCAAGCCGACCCATTTTAAAATACGGACGTGCACGTCCGCCTGGCCGATCCAAACGGACAAAA
AGCGGACAAAGCGCGCGTCCGTTTGGGTCGCCCCGTTGGAGTTGCTCTTAGACTACCAACAAGAAAGAAGACTCGACACC
AAAGGGAGACCAGCGGGCCTCGTTTCGCTGCTCACACCTCGTTCCCGCCGGAGAGGACCCCCTTCCCTCCCGCTCCGAGT
CATGGAAGCCAAACCTACCTGTAGGAACCGAGGATCGCGTGAGGAGCCAACGAGGAATCGTGTAAAGAATAGGAGGCAAG
TTACTCCGTCGACGCCAGAGCCGAGGGATGCCACTGCCGCCATGACATCCCCGCTTGAACATACTAGTTCCCAAATCTAT
CATCGACAATAGGAATGAACAAGTCGTCAAAGAAGAATCTGGAGCCGCCGC------------------CAAAGCCAAGA
CGCCGAACGACCCAAAACCTAAGCTACTAGGGCCCTAGAACCTAAAGCTAAAAGGATCCGAATGCGTGGGGTCCGGCAAC
CCCCCTCACCACCGCCAACCAACAGGTTGCCGGCGGAGGGGAGCCGCTAGAAGACAGCGACAGAAGGATCAGCTCTCCT-
--------GGCGGCGGCTAGGGTTCCTAGCCGCTCACCTAAGAGAAAAACGATTCCCAAGCTTCAAAGGGACTGTTTTTA
-TTTTTGAGAACTTTCAAGGGACTGCTATGCTGCTTCGAAAAACAAAAGCTCGTACGTGTATCCTCTACTTCTACGTTTC
AAGGCGTGTACGGCCCAGATAAAGCCCAGACACATGCGCCGCCGCGCCTCCAGTTGTGCCTCCAACTCGCTACTGCCGCG
TGCGCAAACCCTCGCCGGCGGCCGGCCGTCCTTCGCTTCGCAGCTCGCTAGCAATTGGTAGATCCTCCCGTCCCTCGCGG
TCCCATCATCAAGTTCATTACCGTGGATG----AGTCTCTAACCTTCG------TGCCGATCTGCAGATTGGCCGGCGAT
GGCGCGGGGCTCCAGA------AAGAAGAAGAGGGACACGAGGAGGATGGCGCGCG---GCCCAGTGTCCGAGCTCCCCG
ACGACCTCCTTGTCGAGATCCTCTCGCGCTTGCCCTTCAAGTCCACCCGCTGTTGCATGTGCGTCTC----CACGCGCTG
GCGCGATCTAATCTCCCACCCGGACCACCGCAAGAATATTTCTCAGTCGACCCTCGCCGGCTTCTTCTTTGAAACATGGG
ACACAG------------------------------------------ATCAGGTGTCTCGTCGTTACCAAAGCGTCTCC
GGGAAC---TGGTGCCCTCGCATCAACTCCTCCCTCTCATTCCTGCCCGGATGTGAGAAAC------------TAGACAT
ATTGGACTGCTGCAATGGCCTCCTCCTCTGTAAATGCTGTCAGGACACTGATCGCAAGATAATGGATTACGTGGTGTGCA
ATCCAGCCACTGAGAAGTGGGTGGTCGTGCCTGCCACAAACTGGTCCAGCGAGTCGTGCAAAGTTCGCTTGGGGTTCGAT
CCAGCCGTCTCATCACACTTCCATGTTTTTGAGTTCGTACCTACCTGTGTCTGGGATGGGGATAAGAGTGGTGATCACAG
TCAAAGATGCATCAAAGTGGTGGGAATCTACTCTTCCAAAGCTGGAGTTTGGACACGTCAGCGCGCATGGGACCTTCCAA
TTGAAACAGTCCACTTTATAGGTAGCGCATTTCTGACCGGGATCCTGTATTTAACTTGCAATGATGATTTGGTTGCGACC
ATCGACGTGGATGGAAATTGCAGTTTCGTTCGTGTTCCTAAACCACACTATCAATGTGGTGCTTATGATGTTTATGTGTC
ACGGGGCCATTTGTATTTCGCAAGTTGTGATGCTTCTGAAATATCAATTTGGGTTTTAGAAGATTTTAGTACTGCAAAAT
GGACCTTGAAGCTCAATGTCAGCTACATGCTACTGTTTGGAACAAGGTATACAAGCCATGATGATCATTGTTGTGTTATC
TCAGCTCACCCAGAACATAATGTCATATTC--------------------------------ATCATTGTCAAATATACA
TTGTATTGGCGTTCACTGGTGGAACTATTTTCCTACGCAATAGACTCTAAGGAGCTGCGTTCGATATGTGATCTTGGACG
GGAATCCAGCTCCCCTTATCTTTCATATGTTCCCTTGTTCTCAGAGTCACTGGCAGATGAACACTAAAAGTCTTGCATAT
TGGAGCCTCGCAATTGTCCATCTTTCTGATGAT--ACCAGAGTTAGGTCATGAATACGAGCAGCAATGAAGGA-------
--------------------------------------GCGCATGTACCCGACTTTATATGGCTAGCTAACCAGCCAACT
TTAGTACCTGCTTGTGCTTGTGTGGTCATAAATTTATTAGTGTAGCCTATATGCAGATGTAACACCATAGTACCTCACCA
TGGATACTCATATTGTTTTGTGTGAACTATTATGAATATTTTAATATCTATACTTTATTTCTCTGTTTGTGAATAATTCG
TCGGTCTACCAACTTCTGTTTCCGACAATACATGAAAGGTTATTTCCTTGTTTGTAATCTCTAGCTCTGGAGTAACTAAC
TGAAGATCTTGCTGTTTGGGTGGACCTGGAATGGAAGAGCACAAGACTGCTGTTGGATTTTTTTG---------------
--------------------TGTCTGTTTGTCATTCCATTTTTGTGTTGTATTTTTTCTTGCCTGCTGAAACTGCGACAT
AATAAGGTT---ATAGTAGTAGTTTAACACGATCGTCGCTAAGGCTTTCTGA--TATGAACTGCCGTTTCAGTTCACTCT
GGACCTCAAGTGTTTATCGCCTCGAGGGTTATTCGCCAGGTGCAATTTCTAATAGACGAGTCACCTGCTCAATTAGTTCA
GTCATGCGTCCCTCCTGCTCAGAAGTCAGGATGATATATAAC-TGCATCCTGATATCGCTGGGAAATCATGATCTACACA
GCTTGCAACAGAGAAACTTCTTATTTGTTTGCTCCACATCGAGCTTCTGATTGTTTGTCAAATCTATCAGGCGACAGTTC
AGATTGGATAATGGAGAAAATCTGGACTGCACACGTTCTTCATAATTAAAGAGTGTCGATTTGCATGAGTAGTGCACCAG
GATCAAGATGAGACAAAGTTGCGATGACGTCGCTCGAGCAACGCCTGTTATATACGTGTCGATTTGATTAA-TTTTCTGG
TGGTTTTTTCCTGTGACCCAATTTGCAAGTCTTGTA
>chrUn_127
--------------------------------------------------------------------------------
----------------------------------------------CTTAGACTACCGACAAGGAAGAAGACTCGCCACC
AAGGGGAAACCAGCGGACCTTGTTTCGCCGCTCACACTTGGTTCCCGCCGGAGAGGACCCCCTGCGGTCCTGCTCTAGAT
CGTGGAGGCCAAACCTACCTGTAGGAACCAAGGATCGCAAGAGGAAACAACGAGGAACCGTGTAAAGAATAGGAGGCAAG
TTACTCCGTTGACGCCAGAGCCGAGGGATGCCGCTGTCGCCATGACATCCCCGCGTGAACATACTAGTTCCCAAATCTAT
AATCGACCATAGAAATGAACGAATCGTCGAAGAAGAATCTGGAACTTCTTTATTCACTGTCACCGCCATCAAGGCCAATA
CGTCGAAGTACCCAAAACCTAAGCTACT-GGGCCCTAGAACCTAAAGCTAAAATGATCCGAACAAATGGGATCCGGCAAC
CCCCCTCACCACCGACGACCAACAGGTTGCCGACGGACAGGAGCCGTTGGATGACAGTGCCAGAAGGATCAACTCTCCTA
GCGGCGGCGGCGGCGGCTAGGGTTCCTAGTCGCTCAACTAGGAGAAAAAC-ATTCCCAAGCTTCAAAGGGACTGTTTTTT
TTTTTTGAGAACTTTCAAGGGACTGCTATGCCGCTTCGAAAAACAAAAGCTCGTACGTGTATCCTCGACTTCTACGTTTC
AAGGCGTGTACGGCTCAGATAAAGCCCAGACACATGCGCCGCCGCGCCTCCACTTCTGCCTCCAACTCGCTACTGCTGCG
AGCACAAACCCTCGCCGGCGGCCGGCCGTCCTTCGCTTCGCAGCTCGCTAGCAATTGGTAGATCCTCCCGTCCCTCACGC
TCCCATCATCAAGTTCATTACCGTGGATG----AGTCTCTAACCTTCG------TGCCGATCTGCAGATTGGCCGGCGAT
GGCGCGGGGCTCCAGA------AAGAAGAAGAGGGACACAAGGAGGATGGCGCGCG---GCCGAGTGTCCGACCTCCCTG
ACGACCTTCTTGTCGAGATCCTCTCGCGCTTGCCCTACAAGTCCACCCGTTGCTGCAAGTGCGTCTC----CACGCGCTG
GCGCGATCTCATCTCCCACCCCGACCACCGCAAGAAGCTTTCTCAGTCGACCCTCGCCGGCTTCTTCTTTGAAACATGGG
ACACAAAAA------------------------------------------AGGTTTCCCGTCGTTACCAAAGCGTCTCC
GGGAAC---TGGCACCCTCCCATCAACTCCTCCCTCTCGTTCCTGCCCCGATGCGAGAAAC------------TCCGCAT
ATTGGACTGCTGCAATGGCCTCCTCCTCTGTAAGTGCTGGCAGGACACTGATCGCAAGATACTGGATTACGTGGTGTGCA
ATCCGGCCACTGAGAAGTGGGTGGTCGTGCCTGCCACAAATTGGTCCAGCCAGTTGTACAAAGCTCGCCTGGGGTTCGAT
CCAGTGGTCTCATCACACTTCCATGTTTTTGAGTTCGTACCTACCTATGTCTGGGATGGGGATAAGAGTGGTGATCATAG
TCAAAGATGCATCAAAGTGGTGGGAATCTACTCTTCCAAAGCTGGAGTTTGGAAACGCCAGCGCGCATGGGACCTTCCAA
TTGAAACAGTCCACTTTATAGGTAGCGCATTTTTGACCGGGATCCTGTATTTAACTTCCAATAATGATTTGGTTGCGACC
ATCGACGTGGATGGAAATTGCAGTTTTGTTCGTGCTCCTAAACCACACTGTCCCGGTTGTGCTTATGATGTTTATGTATC
ACGCAGCCATCTTTATTACACAAATTGTGATGATTCTGAAATATCAATCTGGGTTTTAGAAGATTTTAGTACTGCAAAAT
GGACCTTGAAGCTCAATGTCAGCTACATGCTACTGTTTGGAACAAGGTATTCAAGCCATGATGATCATTGTTGTGTTATC
TCAGCTCACCCAGAACATAATGTCATGTTC--------------------------------ATAATTGTCAAATATACA
TTGTATTGGCGTTCACTGGTGGAACTATTTTCCTACGAAATGGATTCTAAGGAGCTGCGTTTGATATGTGATCTTGGACG
GGAATCCAGCTTCCCTTATCTTTCATACGTTCCCTTGTTCTCAGAGTCATTGGCAGATGAACACTAAAAGTCTTGCATAT
TGGAGCCTCACAATTGTACATCTTTCTGATGAT--ACAAGAGTTACGTCTTGAATACGGGAGGCAATGAAGGATATACCT
TTACAAAGTTTTTTGATAGGCTCTAGGTGCTTGAATGAGCGCATTTATCCGACTTTATACGGCTAGCTATACAGTCAACA
-TAGTACCTGCTTGTGTTTGTGTAGTTATAAATATATTAGTAGCC----TGTGCAGATGTAACACCTTAGTACTTCACCA
TGGATACTCAGATTCTTTCGTGTGAACTATTATGAATATTT-AATATCTACACTTTATTTCTTTGTCTGTAAATAATTTG
TCGTTATAGCAACTTCTGTTTCCGACAATACAT-AAAGGTTATTTTCTTGTTTGTAATCTCTAGCTGTGGCCTAACTAAC
TGAAGATCTTGCTGTTTGGGTGGACCTGGAATGGAAGAGCCCAAGACTGCTGTTGCATTTCTGTAGCGTCCGAGGACTAC
GTGCTATATACGGAGATTCATGTCTGTTTGTCATTCCATTTTTGTGTTGTATTTTCCCTTGCCTGCTGAAACTGCGATAT
ACTAGTAAGGTGATAGTCCTAGTTTAACACGATCGTTGCTAAGGCTTTCTGATATATGAACTGCCGTTTCAATTAACTCT
GAACCTCAAGTGTTTCTCACCT--------------------CAATTTCTAATAGATGAATCGTCTGTTCAATTAGTTCA
GTCATGGGTCCCTCCTGCTCAGAACTCTGGATGATATATAACTTGCATCCTAACATCTCTGGAAAATCATGATCTACACG
GCTTGCAACAGAGAAACTTCTTATTTGTTTGCTCCACATCGTGCTTCTGATTGTTTGTCAAATCTATTAGGCGGCAGTTC
AGATTGGATAATGGAGGAAATCTGGACTGCACACGTTCTTCATAATTAAAGAGTGTCGATTTGCATGAGCAGTTCACCAG
GA------TGAGACGAAGTTGCCAGGACGTCGCTCGAGCACCGCCTATTATCTACGTGTCGATTTGATTAAGTTTTGTGG
TGGTTTTTTGCTGTGACCCAATTTGCAAGTCTTGTA
>chrUn_127
--------------------------------------------------------------------------------
----------------------------------------------CTTAGACTACCGACAAGGAAGAAGACTCGCCACC
AAGGGGAAACCAGCGGGCCTCGTTTCGCCGCTCACACTTGGTTCCCGCCGGAGAGGACCCCCTGCGGTCCTGCTCTAGAT
TGTGGAGGCCAAACCTACCTGTAGGAACCAAGGATCGCAAGAGGAAACAACGAGGAACCGTGTAAAGAATAGGAGGCAAG
TTACTCCGTTGACGCCAGAGCCGAGGGATGCCGCTGTCGCCATGACATCCCCGCGTGAACATACTAGTTCCCAAATCTAT
AATCGACCATAGAAATGAACGAATCGTCGAAGAAGAATCTGGAACTTCTTTATTCACTGTCACCGCCATCAAGGCCAATA
CGTCGAAGTACCCAAAACCTAAGCTACT-GGGCCCTAGAACCTAAAGCTAAAATGATCCGAACAAATGGGATCCGGCAAC
CCCCCTCACCACCGTCGACCAACAGGTTGCCGACGGACAGGAGCCGTTGGATGACAGCGCCAGAAGGATCAACTCTCCTA
GCGGCGGCGGCGGCGGCTAGGGTTCCTAGTCGCTCAACTAGGAGAAAAAC-ATTCCCAAGCTTCAAAGGGACTGTTTTTT
TTT--TGAGAACTTTCAAGGGACTGCTATGCCGCTTCGAAAAACAAAAGCTCGTACGTGTATCCTCGACTTCTACGTTTC
AAGGCGTGTACGGCTCAGATAAAGCCCAGACACATGCGCCGCCGCGCCTCCACTTCTGCCTCCAACTCGCTACTGCTGCG
AGCACAAACCCTCGCCGGCGGCCGGCCGTCCTTCGCTTCGCAGCTCGCTAGCAATTGGTAGATCCTCCCGTCCCTCACGC
TCCCATCATCAAGTTCATTACCGTGGATG----AGTCTCTAACCTTCG------TGCCGATCTGCAGATTGGCCGGCGAT
GGCGCGGGGCTCCAGA------AAGAAGAAGAGGGACACGAGGAGGATGGCGCGCG---GCCGAGTGTCCGACCTCCCTG
ACGACCTTCTTGTCGAGATCCTCTCGCGCTTGCCCTACAAGTCCACCCGTTG----------------------------
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>chrUn_127
--------------------------------------------------------------------------------
----------------------------------------------CTTAGACTACCGACAAGGAAGAAGACTCGCCACC
AAGGGGAAACCAGCGGACCTTGTTTCGCCGCTCACACTTGGTTCCCGCCGGAGAGGACCCCCTGCGGTCCTGCTCTAGAT
CGTGGAGGCCAAACCTACCTGTAGGAACCAAGGATCGCAAGAGGAAACAACGAGGAACCGTGTAAAGAATAGGAGGCAAG
TTACTCCGTTGACGCCAGAGCCGAGGGATGCCGCTGTCGCCATGACATCCCCGCGTGAACATACTAGTTCCCAAATCTAT
AATCGACCATAGAAATGAACGAATCGTCGAAGAAGAATCTGGAACTTCTTTATTCACTGTCACCGCCATCAAGGCCAATA
CGTCGAAGTACCCAAAACCTAAGCTACT-GGGCCCTAGAACCTAAAGCTAAAATGATCCGAACAAATGGGATCCGGCAAC
CCCCCTCACCACCGACGACCAACAGGTTGCCGACGGACAGGAGCCGTTGGATGACAGCGCCAGAAGGATCAACTCTCCTA
GCGGCGGCGGCGGCGGCTAGGGTTCCTAGTCGCTCAACTAGGAGAAAAAC-ATTCCCAAGCTTCAAAGGGACTGTTTTTT
TTTT----------------------------------------------------------------------------
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>chr3A_740
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-----------------------------------------------AGCTCGTACGTGTATCCTCTACTTCTACGTTTC
AAGTCGTGCAGGGCCGAGATAAATCCACTAGTATCTCCACTAGTA-------------CCTCCAACTCGCTACTGCCGCG
TGCGCAAACCCTAGCCGGCGGCCGGCCGTCCTTCGCTTCACATCTCGCTAGCAATTGGTAGTTCCTCCCGTCCGTCACGC
TCCCATCATC-AGTTCATTACCGTGGATGCATGAGTCTCTAACCGTCTCCTTCGTCCCGATCTGCAGACTGTCCTGCCAT
GATGCGGGGCTCCAAGAAGAAGAAGAAGAAGTGGGACACGGGGAGGA------------GCCCGGTGTCCGAGCTCCCGG
ACGACCTCCTGGTCGAGATCATCTCGCGCTTGATCTACAAGTCCACCTGCTGTTGCCAGTGCGTCTC----CACGCGCTG
GCGCGATCTAATCTCCCACCCGGACCACCGCAAGAAGCTTTCTCAGTCGACCCTCGCCGGCTTCTTCTTTGAAACATGGG
ACACAAAAA------------------------------------------AGGTTTCTCGTCGTTACCAAAGCGTCTCC
GGGAAC---TGGCGCCCTCCCATCAACTCCTCCCTCTCGTTCCTGCCGCGATGCGAGAAAC------------TCCACAT
ATTGGACTGCTGCAATGGCCTCCTCCTCTGTAAGTGCTGGCAGGACACTGATCGCAAGATACTTGATTACGTGGTGTGCA
ATCCGGCCACCGAGAAGTGGGTGGTCGTGCCTGCCACAAACTGGTCCAGCAAGTTGTACAAAGCTCACCTGGGGTTCGAT
CCAGTGGTCTCATCACACTTCCATGTTTTTGAGTTCGTACCTACCTATGTCTGGGATGGGGATAAGAGTGGTGATCATAG
TCAAAGATACATCAAAGTGGTGGGAATCTACTCTTCCAAAGCTGGAGTTTGGACACGTCAGCGCGCATGGGACCTTCCAA
TTGAAACAGTCCACTTTATAGGTAGCGCATTTTTGACCGGGATCCTGTATTTAACTTCCAATAATGATTTGGTTGCGACC
GTTGACGTGGATGGAAATTGCAGTTCCGTTCGTGTTCCTAAACCACACTGTCCCGGTTGTGCTTATGATGTTTATGTATC
ACGGGGCCATTTGTATATCGCAAATTGTGATGCTTCTGAAATATCAATCTGGGTTTTAGAAGATTTTAGCACTGCAAAAT
GGACATTGAAGCTCAATGTCAGCTACGAGCTACTGTTTGGAACAAGGTATTCAAGCCATGATGATCATTGCTGTGTTATC
TCAGCTCACCCAGAACATAATGTCATATTC--------------------------------ATAATTGTAAAATATACT
TTGTATTGGCGTTCACTGGTGGAACTATTTTCCTACGAAATGGATTCTAAGGAGCTGCGTTTGATATGTGATCTTGGACG
GGAATCCAGCTTCCCTTATCTTTCATACGTTCCATTGTTCTCAGAGTCATTGGCAGATGAACACTAAAAGTCTTGCATAT
TGGAGCCTCACAATTGTCCATCTTTCTGATGATATACAAGAGTTACGTCTTGAATACGGGAGGCAATGAAGGATAGACCT
TTACGAAGCTTTTTGATAGGCTCTAGGTGCTTGAATGAGCGCATTTATCCGACTTTATACGGCTAGCTATACTGTCAACA
-TAGTACCTGCTTGTGTTTGTGTAGTTATAAATATATTAGTAGCC----TATGCAGATGTAACACCTTAGTACTTCACCA
TGCATACTCAGATTGTTTTGGGTGAACTATTATGAATATTT-AATATCTACACTTTATTTATTTGTCTGTGAATAATTTG
TCGTTCTAGCAACTTCTGTTTCCGACAATACAT-AAAGGTTATTTTCTTGTTTGTAATCTCTAGCTGTGGCCTAACTAAC
TGAAGATCTTGCTGTTTGGGTGGACCTGGAATGGAAGAGCCCAAGACTGCTGTTGCATTTCTGTAGCGTCCGAGGACTAC
GTGCTATATACGGAGATTCATGTCTGTTTGTCATTCCATTTTTGTGTTGTATTTTCCCTTGCCTGCTGAAACTGTGATAT
ACTAGTAAGTTGATAGTACTAGTTTAACACGATCGTTGCTAAGGCTTTCTGATATATGAACTGCCGTTTCAATTAACTCT
GAACCTCAAGTGTTTCTCACCT--------------------CAATTTCTAATAGATGAATCGTCTGTTCAATTAGTTCA
GTCATGGGTCCCTCCTGCTCAGAAGTCAGGATGATATATAACTTGCATCCTAACATCTCTGGAAAATCATGATCTACACG
GCTTGCAACAGAGAAACTTCTTATTTGTTTGCTCCACATCGTGCTTCTGATTGTTTGTCAAATCTATCAGGCGGCAGTTC
AGATTGGATAATGGAGGAAATCTGGACTGCACACGTTCTTCATAATTAAAGAGTGTCGTTTTGCATGAGCAGTTCACCAG
GA------TGAGACGAAGTTGCCAGGACGTCG-TCGAGCACCGCCTATTATCTACGTGTCGATTTGATTAAGTTTTCTGG
TGGTTTTTTGCTGTGACCCAATTTGCAAGTCTTGTA
>chr3A_972
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------------------------------------------------CTTCCGTCCCAAACTGCAGGCTGGCTGGCGAT
GGTGCCAGGGAGCTCC------AAGAAGAAGAGGGTCACGGAGAAGAGCACGGAGAAGAGCCCGGTGTCCGAACTCTCCG
ACGACCTCCTCGTTGAGATCATGTCCCTCTTCCCGTACAAGTCCACCTGCTGCTGCAAGTGTGTCTC----TAGGCGATG
GCGCGACCTCGTCTCCCACCCCGACCACCGCAAGAAGCTGCCCCAGTCAACCCTCGCCGGCTTCTTCTTTGAAACATACG
ACATAGCTACCCATCAGGGGTCTCGCGAAACATGCGACATAACTAGCCATCAGGGGTCTCGCCGCTACCAAAGTGTCTCG
GGGAAC---TGGTGCCCTCGCATCAACGCCTCCCTCTCGTTCCTGCCCAAATGCGAGAGAC------------TTGACAT
TATGGACTGCTGCAATGGTCTCCTCCTCTGTCGCTGCTGGAAGAGCAGTGATGGCAAGATGATGGATTACGTGGTGTGCA
ATCCGGCCACTGAAAAATGGGTGGTCGTGCCTGCCACCAACTGGTCCAGCAAGCTTTGGGCCATTCGCTTGGGGTTCGAT
CCGGCCGTCTCATCCCACTTCCATGTTTTTGAGTTCGTACATGCTTTTGTCTTGGATGCAGCTG------------ACCG
TCGTAGAGACATTGAAGTGGTGGGGGTCTACTCTTCCAAAGCTGGAGTTTGGACACATGAAAGTACTAGGAACCTTCTAG
TTGATATATACTTCTTTTCACCCAGCGTATTTTTTGGCGGAGTGATGTATTTATCTTCCTATGATAATTTGGTCATAGCA
GTCGACATGGAGGGAAAATGTAAGGTCATTCATACTCCTACACCACGCGATGGTTGTGGTGCTTTTGATATTTCTCTATC
ACAGGGACGAGTGTATTTGGCAAATCATGGTGATTCTGAAGTATCAATCTGGGCTCTTGATGATTCTAGTACAGGGAAGT
GGGCCTTGAAGAACAGGGTCAGCCACTTGCAACTGTTTGAAAAAGAGTATCCATCAACGCATGATTACAATGTTATCATC
------CACCCGGAAGACAATGCAATAATAGTGCTATGTTTACAATTGCACATGGGGGGCCAATC-------A-------
----------------------AAGTTTTGTCATACAATATGGATTCTAGGGAGCTGCATTTTATGTCTGATCTTGGATG
GTATTGCAGGATTCCTTATCTTTCATATGTTCCTTTGTTCTCAGAGTCACTCACAGATGCGCACTAGAAGTCTT------
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>chr3B_984
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-------------------------------------------------------------CTGCAGGCTGGCCGGCGAT
GGTGCCAGGGAGCTCC------AAGAAGAAGAGGGACACGGAGAAGAG------------CCCTGTGTCCGAGCTCTCCG
ACGACCTCCTCGTTGAGATCATGTCCCTCTTGCCGTACAAGTCCACCTGCTGCTGCAAGTGCGTGTC----TAGGCGATG
GCGCGACCTCGTCTCCCACCCCGACCACCGCAAGAAGCTGCCCCAGTCGACCCTCGCCGGCTTCTTCTTTGAAACATACG
ACATAACTAGCCGTGAGGTGTCTCGC------------------------------TCTCGCCGCTACCAAAGTGTCTCG
GGGAAC---TGGTGCCCTCGCATCAACGCCTCCCTCTCGTTCCTGCCCAAATGCGAGAGAC------------TAGACAT
TATGGACAGCTGCAATGGTCTCCTTCTCTGTCGCTGCTGGAAGAGCACTGATGGCAAGATGATGGATTACGTGGTGTGCA
ATCCGGCCACTGAAAAATGGGTGGTCGTGCCTGCCACCAACTGGTCCAGCAAGCTGTGGGCCATTCGCTTGGGGTTTGAT
CCGGCCGTCTCATCCCACTTCCATGTTTTTGAGTTCGTACCAGCTTTTGTCTTGGATGAAGCTG------------ACCG
TCGTAGATACATTAAAGTGGTGGGGGTCTACTCTTCCAAAGCTGGAGTTTGGACACATGAAAGTACTGGGAACCATCTAG
TTGATATATGCATCTTTTCATCCAGCGTATTTCTTGGCGGAGTGATGTATTTATCTTCTTATAATGATTTGGTTATAGCA
GTCGACATGGAGGGAAAATGTAAGGTCATTCGTACACCTGCACTACGCGATGGTTGTGGGGCTTATGATATTTCTCTATC
ACAGGGGCGATTGTATTTGGCAAAACATGGTGATTCTGAAGTATCAATCTGGGCTCTTGATGATTCTAGTACAGGAAATT
GGACCTTGAAGAACAAGGTCAGCCACTTGCAACTGTTCGAAAAAGAGTATTCATCAATGCATGATTACGATGTTATCATC
------CACCCGGAAGACAATGCCATTATAGTACTATGCGCACAACTGCACATCGGGGGCCAATCATTGACAA-------
----------------------AAGTTTTGTCATACAATGTGGAATCTAGGGAGCAGCATTTTATGACAGATCTTGGATG
GTATTGCAGGATTCCTTATCTTTCATATGTTCCTTTGTTCTCAGAGTCACTGGCAGATGCACAGTAGAAGTCTT------
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>chr3D_984
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-------------------------------------------------------------CTGCAGGCTGGCCGGCGAT
GATGCCAGGGAGCTCC------AAGAAGAAGAGGGACACGGAGAAGAG------------CCCGGTGTCCGAACTCTCCG
ACGACCTCCTGGTTGAGATCATGTCCCTCTTGCCGTACAAGTCCACCTGCTGCTGCA----CGTGTC----TAGGCGATG
GCGCGACCTCGTCTCCCACCCCGACCACCGCAAGAAGCTGCCCCAGTCGACCCTCGCCGGCTTCTTCTTTGAAACATACG
ACATAACTAGCCGTCAGGTGTCTCGC------------------------------TCTCGCCGCTACCAAAGTGTCTCG
GGGAAC---TGGTGCCCTCGCATCAACGCCTCCCTCTCGTTCCTGCCCAAATGCGAGAGAC------------TAGACAT
TATGGACAGCTGCAATGGTCTCCTCCTCTGTCGCTGCTGGAAGAGCACTGATGGCAAGATGATAGATTACGTGGTGTGCA
ATCCGGCCACTGAAAAATGGGTGGTCGTGCCTGCCACCAACTGGTCCAGCAAGCTGTGGGCCATTCGCTTGGGGTTCGAT
CCGGCCGTCTCATCCCACTTCCATGTTTTTGAGTTCGTAGATGCTTTTGTCTTGGATGCAGCTG------------ACCG
TCGTAGACACATTAAAGTGGTGGGGGTCTACTCTTCCAAAGCTGGAGTTTGGACACATGAAAGTACTGGGAACCATCTAG
TTGATATATGCATCTTTTCACCCAGCGTATTTTTTGGCGGAGTGATGTATTTATCTTCTTATAATGATTTGGTTATAGCA
CTCGACATGGAGGGAAAATGTAAGGTCATTCGTACTCCTGCACCACGCGATGGTTGCGGTGCTTATGATATTTCTCAATC
ACAGGGGCGGTTGTATTTGGCAAATCATGGTGATTCTGAAGTATCAATCTGGGCTCTTGATGATTCTAGTACAGGAAACT
GGACCTTGAAGAACAAGGTCAGCCACTTGCAACTGTTCGAAAAAGAGTAT------------------------------
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>chr5D_1062
CCGGC---------------------------------------------------------------------------
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--------------------------------------------------------------------------TCTCCG
ACGATCTCCTCGTCGAGATCATCTCGCGCGTGCCCTTCAAATCCACCCGTTGCTGCA----AGTGCGTCTGCAGGCGATG
GCGCGACGTCGTCTCCAACCCTGACCACCGCAAGAAGCTGCCTCGGTCGACCCTCGCCGGCTTCTTCTACAGAACCGGGC
ATCTGTGTTGCAGAACTATGAA------------------------------------CCGTCATTACAAAAGCCTAACA
GGGAAGAAGTGGTGCCGCGGCATCGACCCCGCCCTCAAGTTCCTGCCCAAATACAGACTCTGTGACATTCACATTGACAT
GTTGGACTGCTGCAATGGCCTCCTGCTTTGCCGACGACAGCAGACCGATTATCACGGGACAACGGACTACGTGGTGTGCA
ATCCGGCCACTAAGACATGGATTGCCGTGCCTGGCACCGACCGGTCCCGCGAGCTGCGCGTCGCTCGCCTTGGGTTCGAC
CCGGTCGTCTCCTCTCACTTCCGTGTACTTGAGTTTGCACCGACGGATGATAATGATACACACGTCAAGCCAT-------
--------------------TGGGGATCTACTCCTCAGAAGCTGGAGCCTGGACACATCGGAGCGATTGGAAATGTCCAA
TTGATATAAATAAATATTCCAGTAGCGCATTTTTCAGAGGGGTGCTATATTTATCTTCCTATGAAGATAAGGTTGTAGCC
GTCGACTTGGAGGGAAATTGTAGGGTCATTCATATTCCTACCTTACATGATTCTTGTATTGCTCGTGAAGTTTATGTATC
ACAGGGACAATTGTATGTTGTAATTTCTAGTGATTCTGAACTATCAATGTGGGCTCTTGAAGATTCTAGTACTGAAAATT
GGACCTTGAAGCACAATCTCAGCCATTTGCAATTGTTTGGAGCAGAGG--------------------------------
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>chrUn_2546
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------------TGTTTGGGTGGACCTGGAATGGAAGAGCCCAAGACTGCTGTTGCATTTCTGTAGCGTCCGAGGACTAC
GTGCTATATACGGAGATTCATGTCTGTTTGTCATTCCATTTTTGTGTTGTATTTTCCCTTGCCTGCTGAAACTGCGATAT
ACTAGTAAGGTGATAGTCCTAGTTTAACACGATCGTTGCTAAGGCTTTCTGATATATGAACTGCCGTTTCAATTAACTCT
GAACCTCAAGTGTTTCTCACCT--------------------CAATTTCTAATAGATGAATCGTCTGTTCAATTAGTTCA
GTCATGGGTCCCTCCTGCTCAGAACTCTGGATGATATATAACTTGCATCCTAACATCTCTGGAAAATCATGATCTACACG
GCTTGCAACAGAGAAACTTCTTATTTGTTTGCTCCACATCGTGCTTCTGATTGTTTGTCAAATCTATCAGGCGGCAGTTC
AGATTGGATAATGGAGGAAATCTGGACTGCACACGTTCTTCATAATTAAAGAGTGTCGATTTGCATGAGCAGTTCACCAG
GA------TGAGACGAAGTTGCCAGGACGTCGCTCGAGCACCGCCTATTATCTACGTGTCGATTTGATTAAGTTTTGTGG
TGGTTTTTTGCTGTGACCCAATTTGCAAGTCTTGTA
>SNPs
S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-----S-----------S----
--S----S--------------------S--------S-S-----------------------S-SS---S----SSSS-
-S----S----------------------S--------SS-----SS----------S----------------------
---------S----------------------S---S-----------------S-------------------------
S------S----S-------S-S-----S--------------S-SS-SSS---------------------S-----S-
--S----SS-------------------S------------------------S--------SSSS----S---------
--------------S-S---------------S----SS-------S-S--S-------S-----------S--------
-----------------------------S------S---S---------S----------------------------S
-------------------------------S------------------------------------------------
----------------------------------------------------S--S------------------------
----------------------------------------------------------------------------S--S
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---------------------------------------------------------S----------------------
------------------------------------SS------------------------------------------
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--------------------------------------S---------S----S--------------------------
---------------------------------------S----------------------------------------
----S-------------------------------------------------S-------------------------
----------------------------------------------S---------------------------------
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---------------------------------------------------------S----------------------
----------------------------------------------------SS-----------------------S--
-----------------------S------------------------S-------------------------------
--------------------------------------------------S-----------------------------
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-------------------------------------S---S--S----------------S------------------
-----------S--------------------------------------------------------------------
---------S---------------------------S-------S---S--------S-SS------------------
--------------------------------------------S--S-----------S---------SS---S----S
S---------------S------S--S------S-------SSSSSSSS-----------------S------S------
----------S------------------------------S--------S-----------S---S-----------S-
---S----S------------------------S-----------S--------------------S---SS--------
----------------------------------------S--------------S----S-S-S---------------
-------------------------------------------------------SS--------------------S--
-S--SSSSS---------S-----------------S----------------------------------S--S-----
-S-------------S--S---SSSSSSSSSSSSSSSSSSSS--------------S--S--SS---S------------
------S--------------------------------------------S-S---S----S----------------S
-----------------------------------------S-------------------------------S------
----------------S----------------------------------------------------S---S------
--SSSSSS------S-------S-S---------------S-----S----S----------------------------
---------S--------------------------
>forward_449
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-----------------------------AAGAAGAATCTGGAGCCGCC-------------------------------
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>reverse_2381
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------------------------------------------------------------CAGCAATGAAGGAGCGCATG
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