>input_sequence_58714
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--------------------------------------ATGGTGATCAAGCTCAGCGCCGGCGCCATCGCGGTGTCTGTC
TGCCTGTCGCTCGCCTTCTTCGCCGGGCACGGGCAGCCCGTGCTGGCCGACGGTGGCGGCGGCAAGAAGCACGATG---T
TGCTGACACGGTTAAGAAGGAAGTGGCCATGTCCATCAAGAAAAACCCGCGCATCGGCGCCGCCCTCGTCCGGTTGCTCT
TCCACGACTGCTGGGTCCACGTACGTATGCATAAGCAAAGCCATGATCCGACAAATTTGCATGCCGTATTGCCGTCGATG
ACAGATGTA------TCTATCCATGC-----------ATGCGCTTGGTATTGATTTGCTGCGTA---AAATGATGTACGT
GCAGGGCTGCGATGGATCGGTGCTCTTAGACAAGGCGCCGGACGGCGGCAGCACGGAGAAGGACGCGACGAACAACATCG
GCCTCGAGGGCTTCGACCTGATCGACAGGATCAAGGGCAAGCTCGGCGAAAGCGTCTCCTGCGCGGACATCGTCGTCCTG
GCGGCCCGGGACGCGACCTTCATCCTCAGCCGCGGCAACATCGCCTACGACGTCACAACGGGGCGGAAGGACGGCGTCAG
GTCGTCCGCCGCGGCCGCCGACGCCGTCCTCCCTCCATCCACCTTCAACTTCACCCAGCTCAAGGCCAACTTCGCCGGCA
GGAACTTCACCCAGACGGAGCTCGTCGTCCTCTCCGGCACCCACGCCGTCGGCGTCGCCCACCTCTCGTCGTTCCGCGAC
CGGCTCGACAACGCCACGGCCACCCCGATCAGCGCCAGGTACCAGAGAGCCCTCGCGGAGCACATTGAGGAGCAGAAGGG
CGTGCAAGGGACGCCGGACCCGACGGAGCCCAACAACATCCGCGACATGGAGTTGGCCTTCCGGAACGCCTCCGGGCACA
ACGCCAGCGGGGTGGACACGTCGAGGGCGGCGAGGGGGGTCCTGGACAACAGCTACTACCACGCCAACCTCCAGAACAAG
GTGCTCTTCAGGTCCGACTGGGAGCTGCGCAACGACACCACCGGCGCCGCCGGGAGGGACATGCGGGAGTTTAGGGACGA
CGCCGCCACGTGGTACCTGCTATTCGGCAAGGCCATGGCCAAGCTCAGCGAGATCCCCGCCGAGGGCAG---CCGCTTCG
AGATCAGGAAGCACTGCAGAACCACCAACTGA------------------------------------------------
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>chr1A_1_TraesCS1A01G078000
ACAAAAACTACTCATCTAAATTCGAAAACATTCATAAAAATTC-AAAAAATATTCATAAAAAAATCAATTTTTAG-TCAT
CAAAATT-----------------TAAAAAATGTTCATTTGTTGGAATTCGTGAAAAACATTCTGAATTCATGAACATTT
GTTTGCATTAGTGAACATTTTTTAAAATTCTAAACTTTTTTCTAAATCACAAACTTTTTTAAAGAAGCAAAAAAAAAAAT
CCAAAACAAAACAAAAAAGAAATGAAAAGAAACAAGGGAGCCCCGCCCCGCCCCGCCCTCGGTCTGCCCAAGTTCAAGCG
---------------------CTGCACCTTTCCCAGCAAGCAGCGCGCGGAATAGGAGCTCCCCCGCGAGTGCTCAAAAA
AAGGAAAAACGACTGCAAGAAAGCTTTGATTAAAATTGAATATTTTTCGGACGGCATTTTGGAACCAGTAACGTTCAATT
CAGATTAATAAGATGTGAGGGAGAGGAAAATTGAGAATCGGCAAATCGGCGAGATT-TTGATTACAAAACGGTGCAACCG
TGATCTATTATGCAGGCACAAGGAAATCCGTGGCAACTTGCAT--GCGCGTACGTTGACCAATAGTATATTATATTTTTT
TGGTGGCGTAACGACACCACGCGC----TCCAGCTGATTATCCAGAGATTAAGCTAAGCTAGTTGTGGATGTGTTGCGCG
CAATGATGCATGCTTGCTTGGCCTGCATTTCTGGCATCGACTGTATCCAAGCAGTTGATTAATTAAACACGCGTTACGCC
AAATGCTTTAACGACAAGCAGCAGCAGGATTGACAATTGCGTCAGGTGTAGTGCATGCAAGCTATCGAAGCCCAGCGGGA
TCTCCGGCGCGCACCCATGCATTGCATGCAGCTCTCTGCTTCGTCGTGATCAACGTCGTGATGAGCTGA------GCTCT
ATATATACCGCTGGATCTCAACCT-CACTAGACACGCACAAAC-----ACACAACAATCCATCTTCA-------------
------GTTCGCAATATCCATCTCCAGATCGATCTACGATGGTGATCAAGCTCAGCGCCGGCGCCATCGCGGTGTCTGTC
TGCCTGTCGCTCGCCTTCTTCGCCGGGCACGGGCAGCCCGTGCTGGCCGACGGTGGCGGCGGCAAGAAGCACGATG---T
TGCTGACACGGTTAAGAAGGAAGTGGCCATGTCCATCAAGAAAAACCCGCGCATCGGCGCCGCCCTCGTCCGGTTGCTCT
TCCACGACTGCTGGGTCCACGTACGTATGCATAAGCAAAGCCATGATCCGACAAATTTGCATGCCGTATTGCCGTCGATG
ACAGATGTA------TCTATCCATGC-----------ATGCGCTTGGTATTGATTTGCTGCGTA---AAATGATGTACGT
GCAGGGCTGCGATGGATCGGTGCTCTTAGACAAGGCGCCGGACGGCGGCAGCACGGAGAAGGACGCGACGAACAACATCG
GCCTCGAGGGCTTCGACCTGATCGACAGGATCAAGGGCAAGCTCGGCGAAAGCGTCTCCTGCGCGGACATCGTCGTCCTG
GCGGCCCGGGACGCGACCTTCATCCTCAGCCGCGGCAACATCGCCTACGACGTCACAACGGGGCGGAAGGACGGCGTCAG
GTCGTCCGCCGCGGCCGCCGACGCCGTCCTCCCTCCATCCACCTTCAACTTCACCCAGCTCAAGGCCAACTTCGCCGGCA
GGAACTTCACCCAGACGGAGCTCGTCGTCCTCTCCGGCACCCACGCCGTCGGCGTCGCCCACCTCTCGTCGTTCCGCGAC
CGGCTCGACAACGCCACGGCCACCCCGATCAGCGCCAGGTACCAGAGAGCCCTCGCGGAGCACATTGAGGAGCAGAAGGG
CGTGCAAGGGACGCCGGACCCGACGGAGCCCAACAACATCCGCGACATGGAGTTGGCCTTCCGGAACGCCTCCGGGCACA
ACGCCAGCGGGGTGGACACGTCGAGGGCGGCGAGGGGGGTCCTGGACAACAGCTACTACCACGCCAACCTCCAGAACAAG
GTGCTCTTCAGGTCCGACTGGGAGCTGCGCAACGACACCACCGGCGCCGCCGGGAGGGACATGCGGGAGTTTAGGGACGA
CGCCGCCACGTGGTACCTGCTATTCGGCAAGGCCATGGCCAAGCTCAGCGAGATCCCCGCCGAGGGCAG---CCGCTTCG
AGATCAGGAAGCACTGCAGAACCACCAACTGAAACTGCCACGACGTACACCGTCCTGAACTCGATCATGTGCAGCGTATA
GTAATGGTTTGAATTCACAAGTTTGTCCTCTACCTAACTTGTACTACT---CCGATATTCACCGCAAATAAAACTATGAA
TGATTTATAAAAGGATGTGGCTAGGTCTCGGTCTACTGAAACATAACCAAATGTCAGTCAACTGATATCGTATATATATA
AAAAACTAAAAGAAAAAA----------ATACGAATCTCTATGAAAGATCAAAGAAATATAACATCAATTGAGCCATAAC
GAAGTGTCAGTAACTGAGACTTAGCAAAACTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTTTTTTCTATTTGTTTCTCTCCGTTTTAGG
TAGGTTTTGGTCTATTCCGTTTTCTTTTTACTTTTCCTTTTCTTATAAGAAATTCTTTTGAAATTCATGAAATTTTAAAA
AAACGTCAAACACGTGAACTTTTTAGAATTCAATTATTATTTTTCTTATTTTTTAACTTTTTCCAAATTCATGATTTTTT
TCAAATTTATGACTTTTATTCAAACTCATGAACTGTTTTCAAATTCATTAATTTTTTAAAAAAATCTTGACAATTTCCAA
ATTCAAGGACCATTTTTTCAGAACCCGTGAACTTTTTTAGAGTCAACTGGTCAAAAGTCAGCAGTTAGTGGTCAACTGAT
TCGCT
>chr1D_1
ACAAAAACTACTCATCTAAATTCGAAAACATTCATAAAAATTCAAAAAAATGTTCATAAAAAATTCAATTTTTTACTCAT
CAAAATTTAAAAAATTCATTAAACTAAAAAATGTTCATTTTTTGGAATTTGAGAAAAGAA-TCTGAATTCATGAACATTT
GTTTGCATTAGCGTACATTTTTTAAAATTCTAAACTTTTTTTTAAATCACGAACTTTTTTAAAGATGCAAAATAAAT---
-----ACAAAACAAAAAATAAATGAAAAGAAGCAAGGGA-----GCCCCGCCCCGCCCTCGGTCTGCCCAAGTTCAAGCG
TGGGGGAGCCCGGGGTGCGCGCTGCACCTTTCCCAGCGAGCAACGCGCGGAATAGGAGCTCCCCCGTGTGTGCTCAAAGA
AAGGAAAAACAACTGCAAGAAAGCTTTGACTAAAATTGAATATTTTTCGGAGGGCATTTTGCAACAAGTAACGTGCAATT
CAGATTACTAAGATTTGAGGGA--GGAAAACTAGGAACCAGCAAATCCGTGAGATTGTTAATAACAAAACGATGCAAGC-
TGATCTATTGTGGCAAC---------------------------------TACGTTGACCAATAGTATATT------TTT
TGGTGGCGTAACGACACCACGCGC----TCCAGCTGATTATCCAGAGATTAAGCTAAGCTAGTTGTGGTTGTGTTGCGCA
CAATGATGCATGCTTGCTTGGCCTGCATTTCTGGCATCGACTGCATCCAAACAGTTAATTAATTAAGCACGCGTTACGCC
AAATGCTTCAACGACAAGCAGCAGCAGGATAGACAATTGCGACCGTC--AGTGCATGCAAGCTAAGGAAGCCTAGCGAGA
TCTCCGGAGCGCGCCCATGCATGCAGCTCTG--------TTCGTCGTGA-----------------TGA------CCTCT
ATATATACCCCTCGATCTCAACCTTCACTGGACACACACACATACAAGACACAAGTATCCATCTTCA-------------
------ATTGGCAATACCCATCTCCAG-----------ATGGTGATCAAACTCAGCGCCGGCGCCTTCGCGGTGTCTGTC
TGCCTGTCACTCGCCTTCTTCGTCGGGCACGGGCAGCCTGTGCTGGCCGACGGTGGCGGTGGCAAGAAGCACGATG---T
TGCTGACACGGTTAAGAAAGAAGTGGCCATTGCCATGAAGAAAAACCCGCGCATCGGCGCCGCCCTCGTCCGGTTGCTCT
TTCACGACTGCTGGGTCCACGTACGTATAAGC-----AAGCCATCCTCCGATAAGTTTGCA--------TGCCGTCGATG
ACAGATGTA------TCTATCCATGCTAGCTGCCTGCATGCACTTGGTATTAATTTTGCGTAGTAACAAATGATGTACGT
GCAGGGCTGCGATGGATCGGTGCTCTTAGACAAGACCCCGGACGGCGGCAGCACGGAGAAGGACGCGATGAACAATATCG
GCCTGGAGGGCTTCGACCTGATCGACAGGATCAAGGACAAGCTCGGCGAGAGCGTCTCCTGCGCCGACATCGTCGTGCTG
GCCGCCCGGGACGCGACCTCCATCCTCAGCCGCGGCAACATCGCCTACAACGTCACGACGGGGCGGAAGGACGGCGTCAG
GTCGTCCGCCGCGGCCGCCGACGCCGTCCTCCCTCCCTCCACGTTCAACTTCACGCAACTCAAGGCCAACTTCGCCGCCA
GGAACTTCACCCAGACGGAGCTCGTCGTCCTCTCCGGCGCGCACGCCGTCGGCGTCGCCCACCTCTCGTCGTTCCGCGAC
CGCCTCGACAACGCCACCGCCACCCCGATCAGCGTCAGGTACCAGAATGCGCTCCGCGACCATGTTGAGGACAAGACGAC
GGCGGCGGT---GCCCGACCCGACGGAGATGAACAACATCCGCGACATGGAGTTCGCCTTCCGGAACGCCTCCGGGTACA
ACGCCACTGGGGTCGACACGTCCAGGGCGGCGAGGGGGGTCCTGGACAACAGCTACTACCACGCCAACCTCCAGAACAAG
GTGCTCTTCAGGTCCGACTGGGAGCTGCGCAACGACACCACGGGCGCCGCCGGGAGGGACATGAGGGAGTTTAGGGACGA
CGCTGCCGGGTGGTACGTGCTATTCGGCAAGGCCATGGCCAAGCTCAGCGAGATCCCCGCCGAGGGCAG---CCGTTTCG
AGATCAGGAAGAACTGCAGAACCACCAACTGAAACTGCCACGACATACGGCGTTCAAAACTCGATCATGTGCAGCGTATA
TTAATGGTTTGAATTCGAAAGTTTGTCCTCTACCTAACTTGTACTACT---TCGTTATTCACCGCAAATAAAACTATGAA
TGATTTATAAAAGGATGTGGATAGGTG------------------------TCTCAATCAAGTGATATTGTATATACAGT
ATAAAAAAGAAAAACTGAAAAAGAAATCATACGAATCTCCATGTAAGATCAAAAAAATATAGCATCAACAGAGACATAAC
GAAGTGTCAGAAACTAAGA-------------------------------------------------------------
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>chr1B_548
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----------------------------CGTGGCAACTTGCACACGCGCGTACGTTGACCAATACATA---------TTT
TGGTGGCGTAACGACACCACGCGCGCGGTCCAGCTGATTATCCAGAGATTATGATAAGCTAGCTGTGGCTGTGCTAAGCA
CCATGATGCATGCTTGCTTGGCCTGCATTTCTGGCATCGACTGTATCCAAACAGTTAATTAATTAAGCACGCGTTACGCC
AAATGCTTGAACGACAAGCAGCAGCAGGATAGACAAGTGCGTCAG-----GTGCATGCAAGCTATCGAAGCCCAGCGAGA
TCTCCGGCGTGCGCCCATGCATTCAATGCAGCTCTTTGCTCCGTCGTGATCAACGTCAGTGTGCATGCTATAGAGCCGCT
ATATATACCGCTCGATCTCAACAC-----------------AC-----ACACAACAATTCATCTTGTATTCCAGGAAAAA
AATAAGGTTAGCAATATCCATCTCCAGATCGATCTACGATGGTGATCAAGCTCGGCGCCGGCGCCATCGGGGTGTTTGTC
TGCCTGTCGCTCGTCTTCTTCGTCGGGCACGGGCAGCCCGTGCTGGCCGACGGTGGCGCTGGCAAGAAGCACGATGACGT
TGCGGACACGGTTAAGAAGGAAGTAGCCAAGGCCATGGACAAAAACGATCGTGTCGGCGCCGCCCTCGTCCGGTTGCTCT
TTCACGACTGCTGGGTCCACGTAAGTATAAGC-----AAGGCATGATCCGACAAATTTGCATGCCGTATTGCCGTCGATG
ACAGATGTAGGACTATCTATCCATGC-----------ATGCAC----------TTTTGCGTAGTAATAAACGATGTACGT
GCAGGGCTGCGATGGATCGGTGCTCTTAGACAGGACGCCGGACGGCGGCAGCACGGAGAAGGACGCGATAAACAACATCG
GCCTGGAGGGCTTCGACCTGATCGACAGGATAAAAGGCAAGCTCGGCGAAAGCGTCTCCTGTGCCGACATCGTCGTGCTG
GCCGCCCGGGACGCGGCCTTCATCCTCAGCCGTGGCAACATCGCCTACAACGTCACGATGGGCCGCATGGACGGCGTGGT
CTCATCGGCGCACGACGCCGACGCCGTCCTCCCTCCTTCCACGTTCAACTTCACGCAGCTCAAGGCCAACTTCGCCGCCA
GGAACTTCACCCAGACGGAGCTGGTCGTCCTCTCCGGCGCGCACGCCGTCGGCGTCGCCCACCTCTCGTCGTTCCGCGAC
CGGCTCGACAACGCCACCGCCACCCCGATCAGCGTCAGGTACCAGAACGCGCTCCGCGACCATGTCGAGGACAAGACGAC
GGAGGCGGT---GCCCGACCCGACGGAGACGAACAACATCCGCGACATGGAGTTGGCCTTCCGGAACGCCTCCGGGTACA
ACGCCACTGGGGTGGACACGTCCAGGGCGGCGAGGGGGGTCCTGGACAACAGCTACTACCACGCCAACCTCCAGAACAAG
GTGCTCTTCAGGTCCGACTGGGAGCTGCGCAACGACACCACCGGCGCCGCCGGGAGGGACATGAGGGAGTTCAGAGACAA
CGCCGCCACGTGGTACCTGCTATTCGGCAAGGCCATGGCCAAGCTCAGCGAGATCCCCGCCGAGGGCAC---CCGCTTCG
AGATCAGGAAGGACTGCAGAACCACCAACTGAAACTGCCACGACATACGGCGTCCAAAATTCGGTCATGTGCAGCGTATA
GTAATCGTT------CAAAAGTTTGTCCTCTGCCTAAGTTGTACTACTACTCCGATATTCACCGCAAATAAAACTATAAA
T-------------------------------------------------------------------------------
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>chr5A_1332
ATGAC---------------------------------------------------------------------------
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------------------------------------------------------------------------------GT
GCAGGGTTGCGATGGATCGGTGCTCTTGGACAAGACGCCATACGGTACCAACACCGAGAAGAAGGCGATCAACAACATCG
GCCTGGACGGCTTCAACCTCATCGACACCATCAAGTACAAGCTGGGCGACGGCGTCTCCTGCGCCGACATCGTCGTCTTC
GCCGCGCGAGATGCGGCCAGGTACCTGAGTAATGGCAAGATCGCCTACTCCGTCCCCTCGGGGCGCAAGGACGGCATCAA
CTCGTCGGCCGCCGCCGCAGACGCCGTCCTCCCGCAATCCACCTTCGAGTTCCAGCAGCTCGTGGACAACTTCGACAAGA
AGAAGTTCACCCCGAGGGAGCTCGTCATCCTCTCCGGCGCGCACTCCATCGGCGTCTCGCACCTCTCGTCCTTCCAAGAC
CGCCTCAACAAATCAACCGCGACCCCGATCGACGACAACTACAAACAGGCTCTTGTCGCAGACGTCGAGGCCCAGAAGAA
GAGCCAAAATACACCAGATCCGATTGAGAAGAACAACATCCGCGACATGAGCTCGAGCTTTCAGACCACCGCCGGGTACG
ACCCCACAGGGGTGAACACC------GCGGCCAAGGGCGCCCTGGACAACAGCTACTACCACGCCAACCTGCAGAACAGG
GTGCTCTTCAAGTCCGACTGGGTTATGCGCACCGACACC------GACGCCGGGAACGCTATGGCCGAGTACATGGATAA
CGCCACCAAGTGGAACAACGACTTCGCCGCCGCCATGGTCAAGCTCAGCAAGCTCCCGGCCGAGAGTAGTACCCGTTACG
AGATAAGGAAGAACTGTAGAGTCACCAAC---------------------------------------------------
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>chr5B_1336
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----------------------------------------------------------------------------ACGT
GTAGGGTTGCGATGGATCGGTGCTCTTGGACAAGACGCCATCCGGTGGCAACACCGAGAAGAAGGCGATCAACAACATCG
GCCTGGACGGCTTCAACCTGATCGACACCATCAAGTACAAACTGGGCAACAGCGTCTCGTGCGCTGACATTGTCGTCTTC
GCCGCGCGTGACGCGGCCAGATACCTGAGCGGCGGCAAAATCGCCTACTCCGTTCCCTCAGGGCGCAAGGACGGCATCGT
CTCATCGGATGCTACCGCAGACGCCATCCTCCCACAATCCACCTTTGAGTTCCAGCAGCTCAAGGACAACTTCGCCAACA
AGGGCTTCACCCAGGAGGAGCTCGTCATCCTCTCCGGCGCGCACTCCATCGGCGTCTCCCACCTCTCGTCTTTCCAGGAC
CGCCTCAACGATTCAACCGCGACCCCGATCGACGACAGCTACAAGCAGGCGCTCGTTAAGGACGTCGAGGATCAGAAGAA
GAGCCAAAATACGTCGGATCCGATCGAGAAGAACAACATCCGCGACATGAGCTTGAAGTTCCAGAACGACTCCGGCTACG
ACACCACGGGGGTGAACACC------GCGGCGAAGGGCGCCCTGGACAACAGCTACTACCACGCCAACCTACAGAACAGG
GTGCTCTTCAAGTCCGACTGGGTTATGCGCACCGACAGC------AAAGCTGGGGACGATATGGCCGAGTACATGAACAA
TGCCACCAAGTGGAACAACGACTTCGCCGCCGCCATGGTCAAGCTCAGCAAGCTCCCGGCCGAGGGTAGTACCCGTTACG
AGATAAGGAAGAACTGCAGAGTCACCAAC---------------------------------------------------
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>chr5A_1336
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----------------------------------------------------------------------------ACGT
GCAGGGCTGCGATGGATCGGTGCTCTTGGACCAGACGCCGTCCGGCAGCAATACCGAGAAGAAGGCGATCAACAACATCG
GCCTAGACGGCTTCAGCCTCGTCGACACCATCAAGTCCAAACTGGGCAACAGCGTCTCGTGCGCCGACATAGTCGTCTTC
GCCGGGCGTGACGCGGCCAGATACCTAAGCGGCGGCAAAATCGCCTACTCTGTTCCCTCAGGGCGCAAGGACGGCATTGT
CTCATCGGCGGCCGCCGCAGACGCCATCCTCCCGCAATCCACCTTCGAGTTCCAGCAGCTCAAGGACAACTTCGCCAAGA
AGAACTTCACCCAGGAGGAGCTCGTCATCCTCTCCGGCGCGCACTCCATCGGCGTCTCCCACCTCTCGTCTTTCCAGGAT
CGCCTCAACGATACAACCGCGACGCCGATCAACGACAGCTACAAACAAGCGCTTGTGGCAGACATCGAGGCCCAGAAAAA
TAGCCAAAATACGCAGGATCCCACTGAGAAGAATAACATCCGCGACATGAGCCTGAAGTTCCAGAACGACTCCGGCTACG
ACACTACGGGGGTGAACACC------GCGGCGAAGGGCGCCCTGGACAACAGCTACTACCACGCCAACCTCCAGAACAGG
GTGCTTTTCAAGTCCGACTGGGTTATGCGCACGGACATC------AAAGCCGGGGGCGACATGGCCGAGTACATGAACAA
TGCCACCAAGTGGAACAATGACTTCGCCGCCACCATGGTCAAGCTCAGCAAGCTCCCGGCCGAGGGTAGTACCCATTACG
AGATAAGGAAGAACTGCAGAGTCACCAAC---------------------------------------------------
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>chr5A_1336
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----------------------------------------------------------------------------ACGT
GCAGGGCTGCGATGGATCGGTGCTCTTGGACCAGACGCCGTCCGGCAGCAATACCGAGAAGAAGGCGATCAACAACATCG
GCCTAGACGGCTTCAGCCTCGTCGACACCATCAAGTCCAAACTGGGCAACAGCGTCTCGTGCGCCGACATAGTCGTCTTC
GCCGGGCGTGACGCGGCCAGATACCTAAGCGGCGGCAAAATTGCCTACTCTGTTCCCTCAGGGCGCAAGGACGGCATTGT
CTCATCGGCCGCCGCCGCAGACGCCATCCTCCCGCAATCCACCTTCGAGTTCCAGCAGCTCAAGGACAACTTCGCCAAGA
AGAACTTCACCCAGGAGGAGCTCGTCATCCTCTCCGGCGCGCACTCCATCGGCGTCTCCCACCTCTCGTCTTTCCAGGAT
CGCCTCAACGATACAACCGCGACGCCGATCAACGACAGCTACAAACAAGCGCTTGTGGCAGACATCGAGGCCCAGAAAAA
TAGCCAAAATACGCAGGATCCCATTGAGAAGAATAACATCCGCGACATGAGCCTGAAGTTCCAGAACGACTCCGGCTACG
ACACTACGGGGGTGAACACC------GCGGCGAAGGGCGCCCTGGACAACAGCTACTACCACGCCAACCTCCAGAACAGG
GTGCTTTTCAAGTCCGACTGGGTTATGCGCACGGACATC------AAAGCCGGGGGCGACATGGCCGAGTACATGAACAA
TGCCACCAAGTGGAACAATGACTTCGCCGCCACCATGGTCAAGCTCAGCAAGCTCCCGGCCGAGGGTAGTACCCATTACG
AGATAAGGAAGAACTGCAGAGTCACCAAC---------------------------------------------------
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>chr5A_1336
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------ACGT
GCAGGGCTGCGATGGATCGGTGCTCTTGGACCAGACGCCATCCGGCAGCAATACCGAGAAGAAGGCGATCAACAACATCG
GCCTAGACGGCTTCAGCCTCGTCGACACCATCAAGTCCAAACTGGGCAACAGCGTCTCGTGCGCCGACATAGTCGTCTTC
GCCGGGCGTGACGCGGCCAGATACCTAAGCGGCGGCAAAATTGCCTACTCTGTTCCCTCAGGGCGCAAGGACGGCATTGT
CTCATCGGCCGCCGCCGCAGACGCCATCCTCCCGCAATCCACCTTCGAGTTCCAGCAGCTCAAGGACAACTTCGCCAAGA
AGAACTTCACCCAGGAGGAGCTCGTCATCCTCTCCGGCGCGCACTCCATCGGCGTCTCCCACCTCTCGTCTTTCCAGGAT
CGCCTCAACGATACAACCGCGACGCCGATCAACGACAGCTACAAACAAGCGCTTGTGGCAGACATCGAGGCCTAGAAAAA
TAGCCAAAATACGCAGGATCCCATTGAGAAGAATAACATCCGCGACATGAGCCTGAAGTTCCAGAACGACTCCGGCTACG
ACACTACGGGGGTGAACACC------GCGGCGAAGGGCGCCCTGGACAACAGCTACTACCACGCCAACCTCCAGAACAGG
GTGCTTTTCAAGTCCGACTGGGTTATGCGCACGGACATC------AAAGCCGGGGGCGACATGGCCGAGTACATGAACAA
TGCCACCAAGTGGAACAATGACTTCGCCGCCACCATGGTCAAGCTCAGCAAGCTCCCGGCCGAGGGTAGTACCCATTACG
AGATAAGGAAGAACTGCAGAGTCACCAAC---------------------------------------------------
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>chr5A_1336
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------ACGT
GCAGGGCTGCGATGGATCGGTGCTCTTGGACCAGACGCCGTCCGGCAGCAATACCGAGAAGAAGGCGATCAACAACATCG
GCCTTGACGGCTTCAGCCTCGTCGACACCATCAAGTCCAAACTGGGCAACAGCGTCTCGTGCGCCGACATAGTCGTCTTC
GCCGGGCGTGACGCGGCCAGATACCTAAGCGGCGGCAAAATCGCCTACTCTGTTCCCTCAGGGCGCAAGGACGGCATTGT
CTCATCGGCGGCCGCCGCAGACGCCATCCTCCCGCAATCCACCTTCGAGTTCCAGCAGCTCAAGGACAACTTCGCCAAGA
AGAACTTCACCCAGGAGGAGCTCGTCATCCTCTCCGGCGCGCACTCCATCGGCGTCTCTCACCTCTCGTCTTTCCAGGAT
CGCCTCAACGATACAACCGCGACGCCGATCAACGACAGCTACAAACAAGCGCTTGTGGCAGACATCGAGGCCCAGAAAAA
TAGCCAAAATACGCAGGATCCCATTGAGAAGAATAACATCCGCGACATGAGCCTGAAGTTCCAGAACGACTCCGGCTACG
ACACTACGGGGGTGAACACC------GCGGCGAAGGGCGCCCTGGACAACAGCTACTACCACGCCAACCTCCAGAACAGG
GTGCTTTTCAAGTCCGACTGGGTTATGCGCACGGACATC------AAAGCCGGGGGCGACATGGCCGAGTACATGAACAA
TGCCACCAAGTGGAACAATGACTTCGCCGCCACTATGGTCAAGCTCAGCAAGCTCCCGGCCGAGGGTAGTACCCATTACG
AGATAAGGAAGAACTGCAGAGTCACCAAC---------------------------------------------------
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>SNPs
---------------------------------------------------S-----------S---------SS-----
----------------------------------------S--------S-S-----SS-S-------------------
-----------S-S---------------------------S--------S--------------S------S---SSSS
SSSSS-------------S------------S-------SSSSS------------------------------------
-------------------------------------S----S-----------------------S-S---------S-
----------S------------------S---------------------S---------S---S--------S-----
-------S------S-------SS------S-SS---S-S-------S-S---------S--S--------S-----S-S
---------S--SSSS-SSSSSSSSSSS--------------S----------------------------SSSSSS---
--------------------------------------------------------------------S----------S
--------------------------------------------------S-----S---------S-------------
--------S---------------------S--------------SSSS----------------------------S--
------------S----------SS----------S---------------------SSSS--SSS---------S----
------------S----------------S-----S----S---------------------------------------
---------S----------------------------------------------------------------------
----------------------S------------------------------------S--------------------
-------------------------------S----S-------------------------------------------
-S--------------------------SSSSSSSSS-------------------------------------------
-----------------------------------------S---------S----SSS-SSSS----------------
----------------------------------S---------------------------------S-----------
----S-----------------------------------------------------------S---------------
--S---------------------------------------------S-------S-----------------------
------------------------------------------------------S----------------------S--
--------------------------------------S-S---------------------------------------
-----------------S----------------S-----------S---S----S---------------S------SS
S-S-----SS------------------S-S---------------------------------------------S---
------SS--------------S---------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
-----------S--------------------------------S---SS-----SS-----------------------
-----------------S--------------------------------------------------------------
--------------------S-----SSSSSSSSSSSSSSSSSSSSSSSSS-S---S----S------S-------S-SS
-S---SS-S--S--SSS----------------------S---S---------S-------S------SS---S------
----------S----S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_530
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTGAGAATCGGCAAATCGGC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_1951
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CAACAACATCCGCGACATGG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_1921
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ACATTGAGGAGCAGAAGGG
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_3242
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GTCAACTGGTCAAAAGTCAGCA-----------------
-----
