>input_sequence_58707
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-------------------------ATGGCGAAATCTTTCACCTTATTAGCGCTACTTAGCGCACTGGTTGTCCTCTCAC
TTCTTGTGAGCCCCATTGCTTGTTCCCGCAAGCTCCCCAGGC---------------------CTGCAACCAAGGCCCAC
AAGAACCACACCGCTGCTACCCCTTCGTCGTCTGCCGCTTATGGCTCCGGCGGCTGGTTAGCCGGCGGCGCGACGTATTA
CGGCGCCCCCAACGGCGACGGAAGCGACGGTTAGTGCTTGCATGCTTACTCCGCTGGGAGTAGAA-----------CGTG
-----GTACATTAACTGCACCGCACAGCGTTGAGATGGGTGGAGCTAAAAATCAGGC-----CAAAAATGCAGGTGGCGC
GTGTGGCTACCAGAGCGCTGTCGGCAACCGGCCGTTCTCGTCGATGATCGCCGCCGGCAACCCGTCGCTCTACAGAGATG
GCAAGGGCTGCGGAGCGTGCTACGAGGTCAAGATAAC--------------------------------CCCTAAACAGA
GTGCTGACTTTTCGTGTATAGCTCCACTCCATTAATG-----------GTCCT--------AA-----------------
------CGAAAT-------GAATTCATATGGCGCGCGTACGCAGGTTAAATGCACAGGCAACCAGGCATGCTCCGGCCAG
CCGGCGACCGTCGTCATCACCGACGAGTGCCCCGCCGGGGCCGCTTGCCTCGGTGAGGCCGCCCACTTCGACATGAGCGG
CACCTCCATGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAACTCCGGGCCGGCGGTATCATCAAGATCCAGTACAAGA
GGTACATACTAATTGAGCGAAGAATTTTGCGCTTGCAG----------------CACAAATTAACAG-AGACCGCATTAT
AATAACTAAGCTAATTTAATCTCGGTGTTTTCGTTA---ACCGCAGGGTGCCATGCAAGTACCCTGGCATGAACATTGCC
TTCAAGGTGGACCAGGGCTCCAACCCCTACTACCTGGAGGTCCTGATCGAATTCGAGGACGACGACGGCGACCTCAACGC
CGTGGACCTCATGGAGGCCAACTGCGGCACCTGGACGCCCATGGCGCAGAACTGGGGCGCGCTGTACCGCCTCAACTCCA
ACACCGGCAAGCCGCTGCGCGGGCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAGGAAGCTCGTCGTCAACAACGTC
ATCCCCGCCAGCTGGAAGGCCGGAGCCACCTACCGCTCCTTGGTTAACTACCCCTAA-----------------------
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>chr6A_1_TraesCS6A01G249200
GTTTCTGAGATCCTCTCGAAAATTTCAGCTTAGTTGGACACTATTTGCCTACCTAGTATGTTCGTCTCCAAAAAATACTT
TGTGTTGAAACTGCGGCTGTCTAAACCTAC-AAATCACTCTCAAATCTGATGCTCCACTGACTCAATTCTCAAATCAGTT
AAGCAGATCGAAGTACTCAATGTAAGGAATGGGCGCACCAAATTTGGTGCCAATCCAAGCAC--TTTAAAATTTCAATTA
CTAGTTTGAACACTGTCTAGTCACGTGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTCATGGGTTGTATTCTT------
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---------------------------------------ATTGTGCGCTCTCTAAGTCTCATAATGGCAGCCACCACCGA
----GGACTGACTAGAGTTTTCTCCTTGTTA---------AGGAAGCGCTATCAGTTGTTCGATGTAGCTGAGATCAACG
GCTCACATGCGTCGGTCTTATATGGACTGATGTTAGGCTGCCAACACACCTTCATGTGGAGGGACTTAGGTCAACACCTA
TTTCTGTATTAAAATTCTCAATG-GTATGTTGTGAAATGTACATCGCAATCCATTTTCGTTACAAAAGTAGAGTATTGTC
TCTCCTATAAATTTTGTTCGTGCTGCATGCAGTGATTAAAAAA-------------------------------------
----------------------------------------------TAGTTCGCTTAGCCTATTCTGCTTTAGCACCAAC
CAGTCACGTTCTCCTCAATAATTTACCAGAAGCAGAATCCCCACATCTCTTTCCACGTACGTCTACATCCCCACAAGGTA
CACTATAAATACCCGTCCCGTGGACACTCCCTGCAACTCACCAAGCAAACACTTGAGCTAACCATATCTAGTCCATATCC
TCTCCCAAGCTAGCTCGAAGCAGCAATGGCGAAATCTTTCACCTTATTAGCGCTACTTAGCGCACTGGTTGTCCTCTCAC
TTCTTGTGAGCCCCATTGCTTGTTCCCGCAAGCTCCCCAGGC---------------------CTGCAACCAAGGCCCAC
AAGAACCACACCGCTGCTACCCCTTCGTCGTCTGCCGCTTATGGCTCCGGCGGCTGGTTAGCCGGCGGCGCGACGTATTA
CGGCGCCCCCAACGGCGACGGAAGCGACGGTTAGTGCTTGCATGCTTACTCCGCTGGGAGTAGAA-----------CGTG
-----GTACATTAACTGCACCGCACAGCGTTGAGATGGGTGGAGCTAAAAATCAGGC-----CAAAAATGCAGGTGGCGC
GTGTGGCTACCAGAGCGCTGTCGGCAACCGGCCGTTCTCGTCGATGATCGCCGCCGGCAACCCGTCGCTCTACAGAGATG
GCAAGGGCTGCGGAGCGTGCTACGAGGTCAAGATAAC--------------------------------CCCTAAACAGA
GTGCTGACTTTTCGTGTATAGCTCCACTCCATTAATG-----------GTCCT--------AA-----------------
------CGAAAT-------GAATTCATATGGCGCGCGTACGCAGGTTAAATGCACAGGCAACCAGGCATGCTCCGGCCAG
CCGGCGACCGTCGTCATCACCGACGAGTGCCCCGCCGGGGCCGCTTGCCTCGGTGAGGCCGCCCACTTCGACATGAGCGG
CACCTCCATGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAACTCCGGGCCGGCGGTATCATCAAGATCCAGTACAAGA
GGTACATACTAATTGAGCGAAGAATTTTGCGCTTGCAG----------------CACAAATTAACAG-AGACCGCATTAT
AATAACTAAGCTAATTTAATCTCGGTGTTTTCGTTA---ACCGCAGGGTGCCATGCAAGTACCCTGGCATGAACATTGCC
TTCAAGGTGGACCAGGGCTCCAACCCCTACTACCTGGAGGTCCTGATCGAATTCGAGGACGACGACGGCGACCTCAACGC
CGTGGACCTCATGGAGGCCAACTGCGGCACCTGGACGCCCATGGCGCAGAACTGGGGCGCGCTGTACCGCCTCAACTCCA
ACACCGGCAAGCCGCTGCGCGGGCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAGGAAGCTCGTCGTCAACAACGTC
ATCCCCGCCAGCTGGAAGGCCGGAGCCACCTACCGCTCCTTGGTTAACTACCCCTAAGTTACAGCCTCATCAACTTTTTT
TCACTGCGCCGTACGTGCTTGGCTAGTAACCAAGAAGTGCAGTGCAGAGTGTGGTCGTGGTAATTTAGAACCGCGGGTTA
ATTTCTACCGCGGGGATTGTATTTATACGAATATGCGTCCGGGAACGGCAGGAGGCTGTGTCAGAGGAGGAGGAGCAGGC
CATGCAAAGATTGTGCCAGCTCTTCCCTCCATGGTCTCTCGGCGCTCCCCTAGTGATGCGTGTCGTCGATTTGTATGTAT
TTTGTTTCTCTTCCTCTGTTTTGTCGATGAGGAGAAAAGCTTGTAGTGCAGTGCAAACTAAAGTTGCACGCCGATGTATC
AAGTTGTGTGAGTGTG--T--TTTTGGAGCCCAATCCTTGAGAGAAATGAACTTTTACCATCAGATAATTTATGTACTGA
AATCTGCAATTCCAGCCACTTTATTCAGTTTAATTACCAAGCGTAAAGTCA---------CTCTCTGAACTCTCAATGTG
TGTATTACTACTTGCAAACTGCACCTGAGCCACTCTTCGCTGGGGATGCGCTACATTTGCAGAACCTGCCCAAAGTGTGC
AGAGCTCTTCCTATGAGCACTGATGTTTTTCACACTCCGTCCTTCATTCTTCATGGACCGTGTAAAGTACC------TGT
GTTTATAGGAGCGCCATT--------------------------------------------------------------
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-----------------ATTCCCATGGAAAATGAGTACTAGGAACTTTGGTGATCAGTTTTG------------------
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------------------CTCCTCGGTTACTCCGGTTGTTCTGCCGACGATGACACATGCAGTTCTCCCAAAAAAAGTAC
AGGA------AGGCAGAGGTAGAGACTGTACTGGTCATCAATTATCATCAACACAAGAACTGTTCTCAGAAGGCACTACT
G---TTACTGAAAGAT-CGTCGGTTGTACGAGCACCACCCTACAAGCCTACACACAAGAGCTTCAGTTGTACTACTATTC
GACTTTACATACTAGAAGGTGATTTAATTATAGGTTCGGCATGTGGGTCTGATAAAATAAAGCTTTCAAGTGCAACCATA
T
>chr6D_1
GTTCCTGAGATCCTCCC-AAAATTTCAGCTCAATTGGACACTATTTGCCTACCCAGTCTGTTTGTCTCCTAAAAATACAT
TGTGCTGAAACTGCAGCAGTCTAAACCAACAAAATCACTCTCAAATCTGATGCTCCACTGATCCAATCCTCAAATCAGTT
AAGCGGATCGAAGTACTCAAAGTAAGGAATGAGCTCACCAAATCCGGTACCAATCCAAGCAC--TTTGAACTTCCAATCA
CTAGTTTGAACACTGTC-----ACGTGCAACGAGTCTGAATATAACCTCTTCTTCTTCTTCGTC----------------
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-----------------------------------------------------TCTCTCGTGGGTTGTATTCTT------
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---------------------------------------GTTGTGCGCTCTCTCAGTCTCACAATGGAAGCCACCACCGG
GATTGGACTGACTAGAGTTTTCTCCTTGTCTCGCTTCCTTAGGGAGCACTATCAGCTGTTCGATGTAGCTGAGATCAACG
GCTCACATGCGTTTGTCTTATATGAGTTGATGTTAGGCTGCCAACACAACTTCATGTGGAGGGACTTAGCCCAACACCTA
CTTTTCCATTAAAATTCTCAACATGTGTGTTGTAAAATGTACTTCGCAATCTATTTTCGTTACAAAGGAGAGA-------
-CTCCTATAAATTTTGTTGGTGCTGCATGCAGAGATTAAAAAA-------------------------------------
----------------------------------------------TAGTTCGCTTAGCCTATTTTGCTTTAGCACCAAC
CAGTCACGTTCTCCTCAATAATCTACCAGAAGCAGAATCCCCACATCTCTTGCCACGTACGTCTACATCCCCACAAAGTA
CACTATAAATACCCGTCCCATGGACACTCCCTGCAACTCACCAAGC-AACACTTGAGCTCACCATATCTAATCCATATCC
TCTCCCAAGCTAGCTGGAAGCAACAATGGCGAAATCTTTCACCTTAATAGCGCTACTTAGCGCACTGGTTGTGCTTTCAC
TTCTTGTGAGCCCCATTGCTTGTTCCCGCAAGCTCCCCAAGC---------------------GTGCAACCAAGGCCCAC
AAGAACCACACCGCTTCTACCCCCTCGTCGTTTGCCGCTTATGGCTCCGGCGGCTGGTTAGCCGGCGGCGCGACGTATTA
CGGCGCCCCCAACGGCGACGGAAGCGACGGTTAGTGCTTGCATGCTTACTCCGCTGGGAGTAGAA-----------CGTA
-----GTACATTAACTGCACCGCACGGCGTTGAGATGGGTGGAGCTAAAAATCAGGCA-----AAAAATGCAGGTGGCGC
GTGTGGCTACCAGAGCGCTGTGGGGAACCGGCCGTTCTCGTCGATGATCGCCGCCGGGAACCCGTCGCTCTACAGAGATG
GCAAGGGCTGCGGAGCGTGCTACGAGGTCAGGATAAC--------------------------------CCCTAAACAGC
GTGGTGAC--TTCGTGTATAGCTCCACTCCATTAATG-----------GTCCT--------GA-----------------
------CGAAAT-------GAATTCATGTGGCGCGCGTACGCAGGTCAAATGCACAGGCAACCAGGCATGCTCCGGCCAG
CCGGCAACCGTCGTCATCACCGACGAGTGCCCCGCCGGGGCCGCCTGCCTCGGTGAGGCCGCCCACTTCGACATGAGCGG
CACCTCCATGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAACTCCGGGCCGGCGGTATCATCAAGATCCAGTACAAGA
GGTACATACTAACTCCGCGAAGAATTTTGCGCTTGCAG----------------CACAAATTAACAG-AGACTGCATTAC
AATAACTAAGCTAATTTAATCTCGGTGATTTTGTTA---ATGGTAGGGTGCCATGCAAGTACCCTGGCATGAACATTGCC
TTCAAGGTGGACCAGGGCTCCAACCCCTACTACCTGGAGGTCCTGATCGAGTTCGAGGACGACGACGGCGACCTCAACGC
CGTGGACCTCATGGAGGACAACTGCGGCACCTGGACGCCCATGGCGCAGAACTGGGGCGCGCTGTACCGCCTCAACTCCA
ACACCGGCAAGCCGCTGCGCGGGCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAGGAAGCTCGTCGTCAACAACGTC
ATCCCCGCCAGCTGGAAGGCCGGAGCCACCTACCGCTCCTTGGTTAACTACCCCTAAGTTACAGCCTCATCTACTTTTTT
TCACTGCACCGTACGTGCTTGGCTAGTAACCAAGAAGTGCAGTGCAGAGTGTGGTCGTGGTAATTTAGAACCGTGGGTTA
ATTTCTACTGCGGGGATTGTATTTATACGTATATGCGTCCGGGAACGGCAGGAGGCTGTGTCAGAAGAGGAGGAGTAGGC
CATGCAAAGATTGTGCTAGCTCTTCCCTCCATGGTCTCTCGGCACTCCCCTAGTGATGCGTGTCGTCGATTTGTCTGTAT
TTTGTTTCTCTTCCTCTGTTTTGTTGATGAGGAGAAAAGCTTGTAGTGCAGTGCAA-CTAAAATTGCACGCCGATGTATC
AAGTTGTGTGAGTGTG--TGATTTTGCAGCTCAATCCTTGAGAGAAATGAAATTTTACCATCAGATAATTTATGTACTGA
AATCTGCAATGCCAAGCACTTTATTCAGTTTAATTACCAAGCGTAAAGTCA---------CTCTC---------AATGTG
TGTATTACTAGTTGCAAACTGCACCTGAGTCACTCCTCATTGGGGATGCACTACATTGGCAGAACCTGCTCAAAATGTGC
AGAGCTCTTCCTATGATCGCTGATGTTTCTCACACTCTGTCCTTCATTCTTCATGGACCGTGTAATTGTAAAGTACTTGT
GTTTATAGGAGCGCCATT--------------------------------------------------------------
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-----------------ATTCCCATGGAAAATGAGTACTAGGAACTTTGGTAATCAGTTCTG------------------
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------------------CTCCTCTGTTACTCTGGTTGTTCTGCCGACGATGACACATGCAGTTCTCCAATAAAAAGTAC
AGGA------GGGCAGAGGCAGAGACTGTACTACTCATCA---ATTATCGACACAAGAACTGTTCTCAGAAGGTACTACT
GCTGTTATTGAAAGATCCGTCGGTTGTACGAGCACCACTCTACAAGCCTACACACCAGAGCTTCAGTTGTAC---CATTC
GACTTTACATGCTAGAAGGTGATTTAATTATAGGTTCGGCATGTGGGTCTGATAAAATAAAACTATCAAGCGCGACCATA
T
>chr6B_1
GTTCCTGAGATCCTCTC-AAAATTTCAGCTCAATTGGACACTTTTTGCCTACCCAATCTGTTCGTTTCCCCAAAATACTT
TATGGTGAAATTGCAACAGTCTAAACCAACAAAATCACTCTCAAATCTGATGCTCCACTAATCCAATCCTCAAACCAGTC
AAGCAGGTCGAAGTACTCAAAGTAAGGAGTGAGCTCGCCAAATTTGGTGCCAATCCAAGCACTTTTTGAACTTTCAGTCA
CTAGTTTGAACACTGTCTAGTCACGTGCAACAGATCTAGATATAACCTCTCCCTCTTCTTTCTA----------------
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-----------------------------------------------------TCTCTCATGGATTGTATTCTTCTTGTG
CACTAGTCCTGGCCATGGGCAGCCCGGCCCGAACAGCTCGACCCGGCCCGATGTTGTTCACGGGCTGGGCTCGGGCCTAA
ATTTCAAGCCCAAAGGCCGGCCGGGCCCGGGCCCGCCATATTTGCGTTTTACCGAAGAGGCCTGGTAGGCTTTTACACGA
TAGGGCCAGACTTGGGCCTGATTTTTTAGACCCGACGCCCGTACCGGGCCGGGCCCGGACCTGGGTTTTCTTCGTCGGGC
TTGGTTAGGCCCGGCCTGGCCCGAGGGATGGCTAGGTATATTGTGCGCTCTCTCGGTCTCACAATGGCAGCCACCACTGG
----GGACTGACTAGAGTTTTCTCCATGTCTCGCTTTCATAGGAAGCACTATCAGTTGTTCGATGTAGCTGAGATCAACG
GCTCACATGCGTTGGTCTTATATGGACTGATGTTAGGCTGCCAACACACCTTTATGTGAATAAACTTAGCACAACACCTA
CTTTTGGATTAAAATTCTTAATG-GTATGTTGTGAAATGTACTTCGCAATCCATTGTCTG--------------------
--TCCTATAAATTTTGTTGGTGCTGCATGCAGAGATTAAAAAGTACTCCCTTCATCATATAATATAAAAATGTTTTTGAC
ACTAGTATAGTGTTAAAAACGATTTTATATTTTAGGACAGAGGGAGTAGTTCGCCTAGCCTATCCTGCTTTAGCACCAAC
CAGTCACGTTCTCCTCAATAATTTACCAGAAGCAGAATCCCCACATCTCTTGCCACGTACGTCTACATCCCCACAAAGTA
CCCTATAAATACCCGCCCCATGGACACTCCCTGCAACTCACCAAGC-AACACTTGAGCTCACCATATCTAGTCCATATCC
TCTCCCGAGCAAGCTCGAAGCAGCAATGGCGAAATCTTTCACCTTATTAGCGCTACTTAGCGCACTGGTTGTGCTCTCAC
TTCTTGTGAGCCCCATTGCTTGTTCTCGCAAGCTCCCCAGGC---------------------CTGCAATCAAGGCCCAC
AAGAACCACACCGCTTCTACCCCCTCGTCGTTTGCCGCTTATGGCTCCGGCGGCTGGTTAGCCGGCGGCGCGACGTATTA
CGGCGCCCCCAACGGCGACGGAAGCGACGGTTAGTGCTTGCATGCTTACTCCGCTGGGAGTAGAA-----------CGTA
CTGTAGTACATTAACTGCACCGCACGGCGTCGGTCGA--TGGAGCTAAAAC-CAGGCA-----AAAAATGCAGGTGGCGC
GTGTGGCTACCAGAGCGCTGTGGGGAACCGGCCGTTCTCGTCGATGATCGCCGCCGGCAACCCGTCGCTCTACAGAGATG
GCAAGGGCTGCGGAGCGTGCTACGAGGTCAGGATAACACACACACGCACACGTCCACAGTTTCTGTGACCCCTACACAGC
GTGCTGAC--TTCGTGTA--GCTCCACCCCGTTAAGAGTCATTTTACAGTCCT--------AA-----------------
------CTAAAT-------GAATTCATGTGGCGCGCGTACGCAGGTTAAATGCACAGGCAACCAGGCATGCTCCGGCCAG
CCGGCGACCGTCGTCATCACCGACAAGTGCCCCGCCGGGGCCGCCTGCCTCGGTGAGGCCGCACACTTCGACATGAGCGG
CACCTCCATGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAACTCCGGGCCGGCGGTATCATCAAGATCCAGTACAAGA
GGTACATACTAATTCAGCGAAGAATTTTGCGCTTGCAG----------------CAGAAATTAATAG-AGACTGCATTAT
AATAACTAAGCTAATTTAATCTCGGTGATTCCGTTA---ACCGTAGGGTGCCATGCAAGTATCCTGGCATGAACATTGCC
TTCAAGGTGGACCAGGGCTCCAACCCCTACTACCTGGAGGTCCTGATCGAGTTCGAGGACGACGACGGCGACCTCAACGC
CGTGGACCTCATGGAGGCCAACTGCGGCACCTGGACGCCCATGGCGCAGAACTGGGGCGCGCTGTACCGCCTCAACTCCA
ACACCGGCAAGCCGCTGCGCGGGCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAGGAAGCTCGTCGTCAACAACGTC
ATCCCCGCCAGCTGGACGGCCGGAGCCACCTACCGCTCCTTGGTTAACTACCCCTAAGTTACAGCTTCGTCAGC--TTTT
ACACTGCACCGTACGTGCTTGGCTAGTAACCAAGTAATGCAGTGCAGAGTGTGGTCGTAGTAATTTAGAACCGTGGGTTA
ATTTCTACTGCGGGGATTATATTTATACGAATATGCGTCCGGGAATGGCAGGAGGCTGTGTCAGAAGAGGAAGAGTAGGT
CATGCAAAGATTGTGCTAGCTCTTCCCTCCATGGTCTCTCGGCACTCCCCTAGTGATGCGTGTCGTCGATTTGTCTGTAT
TTTACTTCTCTTCCTCTGTTTTGTTGATGAGTAGAAGAGCTTGTAGTGCAGTGCAA-CTAAAGTTGCATGCCGATGTATC
AAGTTGTGTGAGTGTTTTT--TTTTGCAGTGCAATCCTTGAGAGGAATGAACTTTTACCATCAGATAATTTATGTACTGA
AATCTGCAATTCCAGGCACTTTATTCAGTTTAATTACCAAGCGTAAAGTCACTCTCTCAACTCTC---------AGTGTG
TGTATTACTGCTTGCAAACTGCACCTGAGCCGCTCCTCGCTGGGGGTGCACTACATTTGCGGAACCTGCCCAAAATGTGC
AGAGCTCTTCCTATGAGCACTGATGTTTTTCACACTCTGTCCTTCATTCTTCATGGACCGTGTAATTGTGAAGTACTTTT
TTACTATTCTGACCCTTTCAACAAACTTTGTCACAAAATGAACTCGACGTGAAAGTATTTCACGATCTGATCCTTTTAGC
AACGCCACAGCCCGCGGCGTTTCTGTCCAACATAGAAACGCCGAGGTAGCTAGCGTTTCTGACCAAGAAGAAACGCCGAG
GTAGCTAGCATTGCGGACCAGGTAAGAAACGCCAAAGGCGCTGGCGTTGCTGCCCATCATTGAAACGCCAATGACCATGG
CGTTGCTGCCCTTTTCCATGCACATGTGAAATGTGGATGAACAGCCTAACTAATAAGGCTAATTAATTATGACCAAAGAG
GTCAGCAACGCCATGGTCCCTTGGCGTTTCAATGATGGCAGCAACGCCAGCGCCTTTGGCGTTTCTTACCTGGTCCGCAA
CGCTAGCTACCTCGGCGTTTCTTCTTGGTCAGAAATGCTAGCTACCTCGGCGTTTCTATGTTGGACAGAAACGCCGCGGG
CTGTGGCGTTGCTAAAAGGGTCAGATCGTGAAATACTTTCACGTCGAGTTCATTTTATGACAAAGTTCGTTGAAAGGGTC
AGAATAGTGATTCCGGCCCTCCTCTGTTACTCTGGTTGTTCTT-CGACGATGAGACATGCAGTTCTCCAAAAAGAAAGTA
GTACACGAAGAGGCAGAGGCAGAGACTGTACTGCTCATCA---ATTATC-ACACAAGAACTGTTCTCAGAAGGTACTACT
G---TTATTGAAAGAT-CGTCGGTTGTACGAGCACCACTCTACAAGCCTACACACCAGAGCTTCAGTTGTAC---TATTC
GACTTTACATACTAGAAGGTGATTTGATTATAGGTTCGGCATGTGGGTCTGATAAATTAAAACCATCAAGCGCGAGCATA
T
>chr6D_981
CAAGCAGC-AGC--------------------------------------------------------------------
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------------------AGCAGCAATGGCGAAAAGTTGCACCTTA---GCGCTACTTGGCGCACTCCTGGTGCTCTCGC
TTCTTGTGAGCCCCATTGCTTGCTCCCGCAAGCTCGCCAAGGCGGCGGGGCACCACAAGCCTGCTCCAGTCAAGGGCCAC
AAAAACCAGACCACCACTAACCCCTCCTCGTCCGCCGCATACGG---CGGCGGCTGGTTGCCCGCCGGCGCCACGTATTA
CGGCAACCCCAACGGCGACGGGAGCGACGGTTAGTGCCT---TGCTTACTTTACTGTGGGCCTTATGTCCATAATCCATG
-----GGACCTACGTCGCACCCACATTCATCGAGCTGAAAGATA---CTGACGACAAGAAAACAAATTTGCAGGCGGAGC
GTGCGGCTACCAGACCGCTGTAGGGCACCGGCCGTTCTCGTCGATGATCGCCGCCGGGAGCTCCCCTCTGTTCATGGCGG
GCAAGGGCTGCGGCGCGTGCTATGATGTAAGCA--ACTCACCAAG-----------------------------------
-----------------------CCCCTCCATTAATG-----------GTGCA--------AAGTGGTCGGTTCGGCTGG
TCCTGACAAAAT-------GTGTTGATGTG----ACGTACGCAGGTTAAATGCACGAGCAACTCGGCCTGCTCCGGGAAG
CCTGTGACCGTGGTCATCACCGACCTGAGCCCCGGCAACCT---CTACCCCGGCGAGCCGTGCCACTTCGACATGAGCGG
CACCGCCCTGGGCGCCATGGCGAAGCCCGGCATGGCCGACAAGCTCCGCGCCGGCGGTGTCATCAGGATGCAGTACAAGA
GGTACGCAGCAGCACCACATAGGATCCTCTTCAGTCTTCAGCCTACAGTT-ACACGGAAAACAATGGA-G----------
--TAAATGTGT---GCTGATCTTGGCGCTCCTGTTAATCATGTCAGGGTGCCATGCAAGTACCCCGGCGTCAACATTGCC
TTCAGGGTGGACCAGGGCGCCAACCCCTTCTACTTCAAGACCCTGATCGAGTTCGAGGACGACGACGGCGACCTCAAGGC
CGTGGCCCTCAAGGAGGCCGGCAGCGGCGCCTGGACGCCCATGGCTCAGGACTGGGGCGCTCTGTGGCGCCTCAAC----
--AATGGCAGGCGGCTGCGCGCCCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAGGAAGCTCGTCGTCAACAACGTC
ATCCCCGCCAACTGGAAGGCCGGGGCCACGTACCGCTCCCTGGTGAACTACCCCTGAGT---------------------
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>chr3D_981
CAAGCTACAAGC--------------------------------------------------------------------
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------------------AGCAGCAATGGCGAAAACTTGCACCTTA---GTGCTGCTTGGCGCACTGGTGGTGCTCTCAC
TCCTTGTGAGCCCCATTGCTTGCTCCGGCAAGCTCGCCAAGGTGGCCGGGCCACACAAGCCTGCTGCAGTCAAGGGCCAC
AAAAACCAGACG---ACTAACCCCTCTTCGTCCGCCGCATACGG---CGGCGGCTGGTTGCCCGCCGGCGCCACGTATTA
CGGAAACCCTAACGGCGCCGGAAGCGACGGTTAGTGCTT---TGCTTACTTTACTGTCGGTCTTGCACG-------CATG
-----GGACCTGTATCGCACCCACATTCGTCGAGCTGAAAGATA---CTGAT---AAGGAAAGAAATTTGCAGGTGGCGC
GTGTGGCTACCAGACCGCTGTTGGGCACCGGCCGTTCTCGTCGATGATCGCCGCCGGGAGCTCGCCTCTATTCATGGCGG
GCATGGGCTGCGGCGCGTGCTATGATGTAAGCATAAGTCACCAAGC----------------------------------
-----------------------TCCTTCCATTAATG-----------GCGCAAATTGGACAAGTGGTCGGCTCGGCTTG
TCCTGACAAATTACAAAACGTGTTCATGTG----GCGTACGCAGGTTAAATGCACGAGCAACTCAGCCTGCTCCGGGAAG
CCTGTGACCGTCGTCATCACCGACCTGAGCCCCGGCAACCT---CTACCCCGGCGAGCCGTGCCATTTCGACATGAGCGG
CACCGCCCTGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAGCTCCGCGCCGGCGGTGTCATCAGGATGCAGTACAAGA
GGTACGTAGCACTACGACATAGGATAGGATCC--TCTTCAGTCTACAGTT-AGACGGAAAACAATGGAAG----------
--TAAATGTCT---GCTGATCTTGGTGTTCCTGTTAATCATCCTAGGGTGCCATGCAAGTACCCTGGCGTGAACATTGCA
TTCAGGGTGGACCAGGGCTCCAACCCCTTCTACTTCAAGACCCTGATCGAGTTCGTGGGCGACGACGGCGACCTCAAGGC
CGTGGCCCTCAAGGAGGCTGGAAGCGGCGCCTGGACGCCAATGGCGCAGGACTGGGGCGCACTGTGGCGCCTCAAC----
--AACGGCAGGCGGCTGCGCGCCCCATTCTGCCTCAAGCTCACCTCCGACTCCGGCAGGGTCCTCGTCGTCAACAACGTC
ATCCCCGCCAACTGGAAGGCCGGGGCCACGTATCGCTCCCTGGTGAACTACCGCTAAGTTACA-----------------
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>chr3A_981
CAAGCTACAAGC--------------------------------------------------------------------
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------------------AGCAGCAATGGGGAAAACTTGCTCCTTT---GTGCTGCTTGGCGCACTGGTGGTGCTCTCAC
AAGTTGTGAGCCCCATTGCTTGCTCCGGCAAGCTCGCCAAGGCGGCCGGGCACCACAAGCCTGCTGCAGTCAAGGGCCAC
AAAGACCAGACCACCACTAACCCCTCTTCGTCCGCCGCATACGG---CGGCGGCTGGTTACCCGCCGGCGCCACGTATTA
CGGTAACCCCAACGGCGCCGGAAGCGACGGTTAGTGCTT---TGCTTACTTTACTGTTGGTGTTGCACG-------CATG
-----GGACCTGTATCGCACCCACATTCGTTGAGCTGAGAGATA---CTGAT---AAGGAAAGAAATTTGCAGGTGGCGC
GTGTGGCTACCAGACCGCTGTTGGGTACCGGCCGTTCTCGTCGATGATCGCCGCAGGGAGCTCGCCTCTATTCATGGCGG
GCATGGGCTGCGGCGCGTGCTATGATGTAAGCATAACTCACCAAGC----------------------------------
-----------------------TCCTTCCATTAATG-----------GTGCAAAGTGGACAAGTGGTCGGCTCGGCTTG
TCCTGACAAATTATAAAACGTGTTCATGTG----GCGTACGCAGGTTAAATGCACGAGCAACTCAGCCTGCTCCGGGAAG
CCTGTGACCGTCGTCATCACCGACCTGAGCCCCGGCAACCT---CTACCCCGGCGAGCCGTGCCATTTCGACATGAGCGG
CACCGCCCTGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAGCTCCGCGCCGGCGGTGTCATCAGGATGCAGTACAAGA
GGTACGCAGCAGTACGACATAGGATAGGATCC--TCTTCAGTCTACAGTT-ACACGGGAAACAACGGAAG----------
--TAAATGTCT---CCTGATCTTGGTGTTCCTGTTAATCATCCTAGGGTGCCATGCAAGTACCCTGGCGTCAACATTGCA
TTCAGGGTGGACCAGGGCTCCAACCCCTTCTACTTCAAGACCTTGATCGAGTTCGTGGGCGACGACGGTGACCTCAAGGC
CGTGGCCCTCAAGGAGGCTGGCAGCGGCGCCTGGACGCCAATGGCGCAGGACTGGGGCGCACTGTGGCGCCTCAAC----
--AACGGCAGGCGGCTGCGCGCCCCATTCTGCCTCAAGCTCACATCCGACTCCGGCAGGGTCCTCGTCGTCAACAACGTC
ATTCCCGCCAACTGGAAGGCCGGGGCCACGTATCGCTCCCTGGTGAACTACCGCTAAGTTACAGCC--------------
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>chr6A_994
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------------------AGCAGCAATGGCGAAAACTTGCACCCTA---GCGCTGCTTGGCGCGCTGGTAGTGCTCTCGC
TTCTTGTGAGCCCCATTGCTTGCTCCCGCAAGCTCGCCAAGGTGGGCGGGCACCACAAACCTGCTCCAGTCAAGGGCCAC
AAAAACCAGACCACCACTAACCCCTCCTCGTCCGCCGCATACGG---CGGCGGCTGGTTGCCCGCCGGCGCCACGTATTA
CGGCAACCCCAACGGCGACGGGAGCGACGGTTAGTGCCT---TGCTTACTTTACTGTCAGCCTTATGTCCATAATCC---
-------------ATGGGACCTACATTCATCGAGCTGAAAGATAGTACTGATGACAAGAAAACAAATTTGCAGGCGGAGC
GTGTGGCTACCAGACCGCTGTCGGGCACCGGCCGTTCTCGTCGATGATCGCCGCCGGGAGCTCGCCTCTGTTCATGGCGG
GCAAGGGCTGCGGCGCGTGCTATGATGTAAGCATAACTCACCAAGC----------------------------------
-----------------------CCCTTCCATTAATG-----------GTGCAA--------AGTGGTCGGCTCAGCTGG
TCCTGACAAAAT-------GTGTTCATGTC----GCGTACGCAGGTTAAATGCACGAGCAACTCGGCCTGCTCCGGGAAG
CCTGTGACCGTGGTGATCACCGACCTGAGCCCCGGCAACCT---CTACCCCGGCGAGCCGTGCCATTTCGACATGAGCGG
CACCGCCCTGGGCGCCATGGCGAAGCCCGGCATGGCCGACAAGCTCCGCGCCGGCGGGGTCATCAGGATGCAGTACAAGA
GGTACGCAGCACGACCACATAGGATCCTCTTCAGTCTTCAGCCTACAGTTTACACGGAAAACAATGGA-G----------
--TAAATGTGTAGAGCTGATCTTGGCGTTCCTGTTAACCATGGCAGGGTGCCATGCAAGTACCCCGGCGTCAACATTGCC
TTCAGGGTGGACCAGGGCGCCAACCCCTTCTACTTCAAGACCCTGATCGAGTTCGAGGACGACGACGGCGACCTCAAGGC
AGTGGCCCTCAAGGAGGCCGGCAGCGGCGCCTGGACGCCCATGGCGCAGGACTGGGGCGCGCTGTGGCGCCTCAAC----
--AATGGCAGGCGGCTGCGCGCCCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAGGAAGCTGGTCGTCAACAACGTC
ATCCCCGCCAACTGGAAGGCCGGGGCCACGTACCGCTCCCTGGTGAACTACCCCTGAGTCACGGCC--------------
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>chr6B_994
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------------------AGCAGCAATGGCGAAAACTTGCACCCTA---GCGCTACTTGGCGCACTGCTGGTGCTCTCGC
TTCTTGTGAGCCCAATTGCTTGCTCCCGCAAGCTCGCCAAGGTGGGCGGGCACGACAAGTCTGCTCCGGTCAAGGGCCAC
AAAAACCAGACCACCACTAACCCCTCCTCGTCCGCCGCATACGG---CGGCGGCTGGTTGCCCGCCGGCGCCACGTATTA
CGGCAACCCCAACGGCGACGGGAGCGACGGTTAGTGCCT---TGCTTACTTTACTGTCGGCCTTATGTCCATAATCCATG
-----GGACTTACGTCGCACCCACATTCATCGAGCTGAAAGATA---CTGACGACAAGAAAACAAATTTGCAGGCGGAGC
GTGTGGCTACCAAACCGCTGTTGGGCACCGGCCGTTCTCGTCGATGATCGCCGCCGGGAGCTCGCCTCTGTTCATGGCGG
GCAAGGGCTGCGGCGCGTGCTATGATGTAAGCATAACTCACCAAGC----------------------------------
-----------------------CCCTTCCATTAATG-----------GTGCAA--------AGTGGTCGGCTCGGCTGG
TCCTGACAAAAT-------GTGTTGATGTG----GCGTACGCAGGTTAAATGCACGAGCAACTCGGCCTGCTCCGGGAAG
CCTGTGACCATCGTCATCACCGACCTGAGCCCCGGCAACCT---CTACCCCGGCGAGCCGTGCCATTTCGACATGAGCGG
CACCGCCCTGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAGCTCCGCGCCGGCGGTGTCATCAGGATGCAGTACAAGA
GGTACGCA---CTACCACCTAGGATCCTCTTCAGTCTTCAGTCTACAGTT-GCACAGAAAATAATGG-AG----------
--TAAATATGT---GCTGATCTTGGCGTTCCTGTTAATCATGGCAGGGTGCCATGCAAGTACCCTGGCGTCAACATTGCC
TTCAGGGTGGACCAGGGCTCCAACCCCTTCTACTTCAAGACCCTGATCGAGTTTGAGGACGACGACGGCGACCTCAAGGC
CGTGGCCCTCAAGGAGGCCGGCAGCGGCGCCTGGACGCCCATGGCACAGGACTGGGGCGCATTGTGGCGCCTCAAC----
--GAGGGCAGGCAGCTGCGCGCCCCCTTCTCGCTCCGGCTCACGTCCGACTCCGGCAGGAAGCTCGTCGTCAGCAACGTC
ATCCCCGCCAACTGGAAGGCCGGGGCCACGTACCGCTCCCTGGTGAACTACCCCTGAGTCACAGCC--------------
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>SNPs
---S-------------S------------S-S--------------------S---S-----------S----------
----S---------S--S---------S---------------------------------SS----S------------
--------------------S----------S--S--------------------------------S--S-------S-
------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
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-----------------------------------------------------S-------S-----------------S
-----------------------------SS----------------S--------------------------------
------------S--------------------------------------------------------SS---------
S--S--S-----------------------------------S-----------------------S-SSSSSSSSSSSS
S-----------------S-------------S-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S------------------------S---
-------------------S--------------------------S------------S--------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
---------------S-------S--------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
------------------------S-------------------------------------------------------
------------------------------S------------------------------------------------S
--------SS----------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-----------------------------------------------------------------S------
--------S--------------------------------------------------------S---------S----
----------------S--------------------------S------------------------------S-----
------------------------S-------------------------------S-----------------------
--------------------------S---S-------------------------------------------------
---------------S-------------------------------------------------SSSSSSSSS------
-----------------------------------S-------------S------------------------S-----
-------------------------------------S---------------------------SSSSSS---------
--------------------------------------------------------------------------------
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---------------------------------------------------S----------------------------
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------------------------S-------S-----------------------------------S-----------
-------------------S-------------S------SSS--S---S-----------------------S------
-------S------------------------------S----------------S----------------SSS-----
-------------------------------------------------------------S--S-----S--S------
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>forward_108
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--------AACTGCGGCTGTCTAAACCT----------------------------------------------------
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>reverse_1536
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---------------GCTACCCCTTCGTCGTCTG----------------------------------------------
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>forward_893
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-------------------------------------------------------------------------ATCAACG
GCTCACATGCGTC-------------------------------------------------------------------
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>reverse_2897
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--------------------------------------------------------------------------------
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----------------CAGCTCTTCCCTCCATGGTC--------------------------------------------
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-
