>input_sequence_58692
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-----------------------------------------------ATGTTCCAACTCCGACCGCGTGTTCTCTCTTTC
CTCGTCCACTCACCACCCCGTCTCCCCGCCTCCCGCGTCAATCCCCTCTCCGCCCTTCG---------CCGCAACCTCTC
CGCCACCACATCCGCTTCACCAAGCCCTTTCGCCGCCGAGGACTACCTCGTCGCCACCTGCGGCGTCTCCCGCGCCCAAG
CCGTCAAGGCAGCGAAGAAGATCTCCCACCTCAAGTCCTCCTCCAAGCCCGACGCGGTCGTCGCCTTCCTCTCCGGCCTC
GGCGTCCCCCGCTCCGACATCGCCGCCATCGTCGCCGTCGACCCGTGGTTCCTCTGCGCCAGCGTGGAGAGGACCCTGGC
GCCCCGCGTCACCGAGCTGAGGGAGCTCGGCCTCTCGCGCTCCGAGGTCGCGCGCCTCGTCCCGCTCGCCCTCTGCTCCT
TCCGCAGCAGCTCCCTCAGGGGCAACCTCGACTTCTGGCTCTCGGTCTTCGGCTCCTACGAGAAGCTCCTCAAGGCCCTC
AAGATGAACTCCGGCCTCCTCGCCGCCGACCTCGAGAAGGTGGCCAAGCCGAATCTGGCCCTCCTCCGGCAATGCGGGCT
AAGTCCCTCCGTCTTCTCGGAGCCCTTCATTTCCCGGGTGCTCATCAGGACCCCCAAGAAAGTCCAGGACGCTTTGGTGC
ACATTGACAAGTTTGGGGTGTCGCAGAACTCGCGGATGTTCCTCTACGCGCTTGTGGCCTTCACCGTCCAGAGCCCGGAG
AAGCTCACCGACAAAATCAGAGTCCTCGAGACGCTTGGTTGGTCGCAGGGCGATGTGCTGTTAGCTGTGAAGACGATGCC
GGGTATCCTGACCATATCCGAGGAGAGGCTGCAGAAAAATGTGCATTTCCTCACAAAGGTTGCTGGGCTGGAGATATCAT
ACATTGCTCAAAGGCCGGTGCTGCTCAAGTATAGCCTTGAGCGCCGTTTGTTTCCTAGGTACTGCTTGCTTAAGCTACTC
AACACGAAGGGGTTGCTGGATCTTCGATTTGATTACAATGCCGCCTCGCTGTCCGAGAAGAAGTTTCTTGGCAGGTTCGT
GCATCCTTACAAGGAGAGTCTTCCAGGCCTTGCTGATGTTTATGCTTCTAGCTGTGCTGGGAAACTACAGATGGAGTTGC
TATCAGAGAACACAAAACAAAACTAG------------------------------------------------------
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--
>chr7D_1_TraesCS7D01G184300
CACGGCATCCACGTGACGAGGCGACATCCACCCTCCCATCCTACGATTTGCTGCGATCCCTGCCCGTCCTAGCCCCGACG
TCGACACCCTGGCCCGCATACAAGCAGGTGCATGCGCCCCTTCCCGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGTTGTGCTCGCAGCAGCAGACGGTCAGCGCC
GTCGGTGACAACGAGCTCATCGTGTGGTGGTGGGCACGAGGGATTTTGATGGAGCAGCAACATGGCGAGAGAAAAAAGAT
GCGGTGCGAGCGAGTGACTCGGACGTCGCCGTGCGTGCTTAGAGAAGGGGCGTCTCACTTGGGCCCCATCAAGGCACGTG
GCCAACTTCCTCGCGTGGAATGTAGGCGTGCGAAGGCGACCGACGGAGCGCACAACCGGTCAGCCGAATTTGCAACACTT
TCCAAAGAAAAGAACCTGAGTATTTTTCCATTCTCAAAAGAAAAAAAGAACGTGACGAAAGAAAAGGCCTCCTGGGCCGT
AGATAAGGAGATATTTT-----CCCTCCAAAAATCGGAAAAGAAGAGAAGATTTTAAACGCCCTGCATTAT--CCCCCCA
GCCGCCGTGAAACCTTCCGCCGGCCGGCCGGCCGCCGCCGCAACGCCATGTTCCAACTCCGACCGCGTGTTCTCTCTTTC
CTCGTCCACTCACCACCCCGTCTCCCCGCCTCCCGCGTCAATCCCCTCTCCGCCCTTCG---------CCGCAACCTCTC
CGCCACCACATCCGCTTCACCAAGCCCTTTCGCCGCCGAGGACTACCTCGTCGCCACCTGCGGCGTCTCCCGCGCCCAAG
CCGTCAAGGCAGCGAAGAAGATCTCCCACCTCAAGTCCTCCTCCAAGCCCGACGCGGTCGTCGCCTTCCTCTCCGGCCTC
GGCGTCCCCCGCTCCGACATCGCCGCCATCGTCGCCGTCGACCCGTGGTTCCTCTGCGCCAGCGTGGAGAGGACCCTGGC
GCCCCGCGTCACCGAGCTGAGGGAGCTCGGCCTCTCGCGCTCCGAGGTCGCGCGCCTCGTCCCGCTCGCCCTCTGCTCCT
TCCGCAGCAGCTCCCTCAGGGGCAACCTCGACTTCTGGCTCTCGGTCTTCGGCTCCTACGAGAAGCTCCTCAAGGCCCTC
AAGATGAACTCCGGCCTCCTCGCCGCCGACCTCGAGAAGGTGGCCAAGCCGAATCTGGCCCTCCTCCGGCAATGCGGGCT
AAGTCCCTCCGTCTTCTCGGAGCCCTTCATTTCCCGGGTGCTCATCAGGACCCCCAAGAAAGTCCAGGACGCTTTGGTGC
ACATTGACAAGTTTGGGGTGTCGCAGAACTCGCGGATGTTCCTCTACGCGCTTGTGGCCTTCACCGTCCAGAGCCCGGAG
AAGCTCACCGACAAAATCAGAGTCCTCGAGACGCTTGGTTGGTCGCAGGGCGATGTGCTGTTAGCTGTGAAGACGATGCC
GGGTATCCTGACCATATCCGAGGAGAGGCTGCAGAAAAATGTGCATTTCCTCACAAAGGTTGCTGGGCTGGAGATATCAT
ACATTGCTCAAAGGCCGGTGCTGCTCAAGTATAGCCTTGAGCGCCGTTTGTTTCCTAGGTACTGCTTGCTTAAGCTACTC
AACACGAAGGGGTTGCTGGATCTTCGATTTGATTACAATGCCGCCTCGCTGTCCGAGAAGAAGTTTCTTGGCAGGTTCGT
GCATCCTTACAAGGAGAGTCTTCCAGGCCTTGCTGATGTTTATGCTTCTAGCTGTGCTGGGAAACTACAGATGGAGTTGC
TATCAGAGAACACAAAACAAAACTAGACAATCTACCTTGCCTGTCCTGGGTGAGCACCATA-------------GGATTG
CCATGTTGGATGGAAAAAGTTAAGGTTTGTCATCCCCCTTGGTCCATTGGTCAAGTTCTGTGCAGTTTTTCTGTAAGTGA
TCCTTTGTAGTGTTATTAACTGATTAAAAAGCATGGTTACAGATTATCATCTTGCCAGAAATAGAGCTTGTAATGAAATT
TCTGGGAATGATCATGCTTGATTTCATCTGCAGTCGGTTTTATTGTTTCTTGGGCTTTCACTGGGAAATTATTGTGTATT
GAGATGCAACTTTACATCTGTATATCTGATTCTAAATGGGGAACTGCTAGGAATCAGTTCATGCGTGGGATGAAACATGT
ATGGACGGTGCATGAGTAGTCTGACGATTTCTTTCTATCAGACGTATGATAGAAAGTG--TTTCCCTTCTAAATGGTTGC
ATTTGGATTTTGATTTTCTCAGAGACATGCATATGAACATTTAGAAAAGTTATTGAGGTGTTGGCTTCAGCTGTTCAATA
TTAATTTTTAGGAACTGGCAAAATTATGTGCTTTCCACAAACCAAGTTGAAATCATTTAGAGCCTACTTCACAAAGTATA
ACTACAAAAAATCAGAGATTC-TACATTATACAAGACGATGGAATGATTTTTGAAAATGGTGATGTGCAATCTTGTTTTG
AAGAGATATTAATTTTGTCTTGATGGGGAAATAATAGAATGAGAGAACTTGCTATATTTGGATAGTGTTCAAGCCAATAA
GCCCAACATAACCTGGTGTGTGATACCTTACATGAATTATGCAGTAGTGACAACCGAGTTCTCGTTTCTGTTATGTTTTT
CTTCTTTCTTGAAACAAACAATTGGCCGTAAAGATACTGATATTTTCAACATTTGTGGATGTTATTTTTGGCTGAAATAT
CCTTTTTGTACTATCAAGATGTTATATATCAGCTCCTCAAATGGAAGAAGGTGTGCAGACCTCGTGATAATAAAACTGAT
GG
>chr7B_819
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------------------AGTAATTTTCGATTCTCAAAAGAGGAAAGAACGTAAC---AAAAAAAGGGCTCCTGGGCCGT
AGATAAGGAGATACGTATTTTCCCCTCTAAAAATCGGAAAAGAAAAGAAGATTTTATACGCCCTCTATTATC-CCCCCCA
GCCGCCGTGAAAGCTACCGCCGGCC----GGCCGCCGCCGCAACGCCATGTTCCAACTCCGAGCGCGTGACCTCTCTTTC
CTCGTCCACTCACCACCCTGTCTCCCCGCTCCCCGCGTCTCTCCCCTCTTCGCCCTTCG---------CCGCAACCTCTC
CGCCACCACATCCGCTTCACCAGGCCCTTTCGCCGCCGAGGACTACCTGGTCGCCACCTGCGGCGTTCCCCGCGCGCAAG
CCGTCAAGGCAGCGAAGAAGATATCCCACCTGAAGTCCTCCTCGAAGCCCGACGCGGTCGTCGCCTTCCTCTCCGGCCTC
GGCGTCCCCCGCTCCGACATCGCCGCCATCGTCGCCGTCGACCCGTGGTTCCTCTGCGCCAGCGTGGAGAGGACCCTGGC
GCCCCGAGTCACCGAGCTGAGGGAGCTCGGCCTCTCGCGCTCCGAGGTCGCGCGCCTCATCCCGCTCGCCCTGTGCTCCT
TCCGCAGCAGCTCCCTCAGGGGCAACCTCGACTTCTGGCTCTCGGTCTTCGGCTCCTACGAGAAGCTCCTCAAGGCCCTC
AAGATGAACTCCGGCCTCCTCGCCGCCGACCTCGAGAAGGTGGCCAAGCCGAATCTGGCCCTCCTCCAGCAATGCGGGCT
AAGTCCCTCTGTCTTCTCGGAGCCCTTCATTTCCCGGGTGCTCATCAGGACCCCCAAGAAAGTCCAGGACGCTTTGGTGC
ACATTGACAAGTTTGGGGTGTCGCAGAACTCGCGGATGTTCCTCTACGCGCTTGTGGCGTTCACTGTGCAGAGTCCGGAG
AAGCTCACCGACAAAATCGGAGTCCTGGAGACGCTTGGTTGGTCGCAGGGTGATGTGCTGCTAGCTGTGAAGACGATGCC
GGGTATCCTGACCATATCCGAGGAGAGGCTGCAGAAAAATGTGCATTTCCTCACAAAGGTTGCTGGGCTGGAGATATCTT
ACATTGCTCAAAGACCGGTGCTGCTCAAGTATAGCCTTGAGCGCCGTTTGTTTCCTAGGTACTGCTTGCTTAAGCTACTC
AACACGAAGGGATTGCTGGATCTCCGATTTGATTACAATGCCGCCTCACTGTCCGAGAAGAAGTTTCTTGGCAGGTTCGT
GCATCCTTACAAGGAGAGGCTTCCAGGCCTTGCTGATGTTTATGCTTCAAGCTGTGCTGGGAAACTACACATGGAGTTGC
TATCAGAGAACACAAAACAAAACTAGAGAATCTACCTTACCTGTCCTGGGTGAGTACCATA-------------GG----
---------ATGGAAAATGTTAAGGTTTGTCATCCCCCTTGGTCCATTGCTCAAGTTCTGTGCAGTTTTTCTGGAAGTGA
TCCTCTATAGTGTTATTAACTGATGAAAAAGCATGGTTACAGGTTATCATCTTGCCAGAAATAGAACGTGTAATGAAATT
TCTGGGAATGATCATGCTTAACTTCATCTGCACTTGGTTTTATTGTTTCTTGGGCTTTCACTGGCAAATGATTGTGTATT
TAGATGCAACTTTACATCTGTATATCTGATTCTAAATGG-----------------------------------------
----------------------------------------------------------------------------TTGC
ATATGGATTTCGATTTTCTCAAAGACATGCATGTGAACATTTAGAAAAGTTATTGAGGTGTTGGCTTCAGCTGTAAAAGA
TTAATTTTTAGGAACTGGCAAAATTATGTGCTTTCCACGAACCAAGTTGAAATAATTTAGAGCCTACATCACAAAGTATA
ACTACAAAAAATCAGAGATTC-AACATTATACAAGAC-ATGGAATGATTTTTGAAAATGGTGAAGTGCAATATTGTTTTG
AAGAGATAGTATTTTTTTCTAGATGTGGCAATAGTAGAATGAGAGAACTTGTTATATTTGGATAGTGTTTAAGCCATTAA
GCCC----------------------------------------------------------------------------
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--
>chr7A_890
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---------GATATTTT-----CCCTCTAAAAATCGGAAAAGAAGAGAAGATTTTAAACGCCCTGTATTATCTCCCCCCA
GCCGCCGCGAAAGCTTCCGCCGGCC----GGCCGCCGCCGCAACGCCATGTTCCAACTCCGAGCGCGTGTCCTCTCTTTC
CTTGTCCACTCACCACCCCGTCTCCGCGCCTCCCGCGTCTCTCCCCTCTTTGCCCTCCGCCGCAAGGCCCGCAACCTCTC
CGCCACCACATCCGCCTCACCAAGCCCCTTCGCCGCCGAGGACTACCTCGTCGCCACCTGCGGCGTCCCCCGCGCCCAAG
CCGTCAAGGCAGCGAAGAAGATCTCCCACCTCAAGTCCTCCTCCAAGCCCGATGCGGTCGTCGCCTTCCTCTCCGGCCTC
GGCGTCCCCCGCTCCGACATCGCCGCCATCGTCGCCGTCGACCCGTGGTTCCTCTGCGCCAGCGTGGAGAGGACCCTGGC
GCCCCGCGTCACCGAGCTGAGGGAGCTCGGCCTCTCGCGCTCCGAGGTCGCGCGCCTCGTCCCGCTCGCCCTCTGCTCCT
TCCGCAGCAGCTCCCTCAGGGGCAACCTCGACTTCTGGCTCTCGGTCTTCGGCTCCTACGAGAAGCTCCTCAAGGCCCTC
AAGATGAACTCCGGCCTCCTCGCCGCCGACCTCGAGAAGGTGGCCAAGCCGAATCTGGCCCTCCTCCGGCAATGCGGGCT
AAGTCCCTCCGTCTTCTCGGAGCCCTTCATTTCCCGGGTGCTCGTCAGGACCCCCAAGAAAGTTCAGGACGCTTTGGTGC
ACATTGACAAGTTTGGGGTGTCGCAGAACTCGCGGATGTTCCTCTACGCGCTTGTGGCCTTCACCGTCCAGAGCCCGGAG
AAGCTCACCGACAAGATCGGAGTCCTCGAGACGCTTGGTTGGTCGCAGGGCGATGTGCTGCTAGCTGTGAAGACGATGCC
GGGCATCCTGACCATATCCGAGGAGAGGCTGCAGAAAAATGTGCATTTCCTCACAAAGGTTGCTGGACTGGAGATATCTT
ACATTGCTCAAAGGCCGGTGCTGCTCAAGTATAGCCTTGAGCGCCGCTTGTTTCCCCGGTACTGCTTGCTTAAGCTACTC
AACACGAAGGGATTGCTGGATCTCCGATTTGATTACAATGCCGCCTCGCTGTCCGAGAAGAAGTTTCTTGGCAGGTTCGT
GCATCCTTACAAGGAGAGTCTTCCAGGCCTTGCTGATGTTTATGCTTCTAGCTGTGCTGGGAAACTACAGATGGAGTTGC
TATCAGAGAACACAAAAGAAAACTAGAGAATCTACCTTGCCTGTCCTGGGTGAGCACCATGGGATTGCCATGTTGG----
---------ATGGAAAAAGTTAAGGTTTGTCATCCCCCTTGGTTCATTGGTGAAGTTCTGTGCAGTTTTTCTGTAAGTGA
TCCTTTGTAGTGTTATTAACTGATTAAAAAGCATGGCTACAGATTATCATCTTGCCAGAAATAGAGCGTGTAATGAAATT
TCTGGGAATGATCATGCTTGACTTCATCTGCAGTCGGTTTTATTGTTTCTTGGGCTTTCACTGGGAAATTATTGTGTATT
GAGATGCAACTTTACATCTGTATATCTGATTCTAAATGGGGAACTGCTAGGAATCAGCTCATGCGTGGGACGGAACATGT
ATGGACGGTGCATGAGTATTCTGTCGATTTCTTTCTATCAGACGTGTGATAGAAAGTTTTTTTCCCTTCTAAATGGTTGC
ATTTGGATTTTGATTTTCTCAGAGACATGCATATGAACATTTAGAAAAGTTATCGAGGTATTGGCTTCAGCTGTTCAAGA
TTAATTTTTAGGAACTGGCAAAATTATGTGCTTTCCACAAACCAAGTTGAAATCATTTAGAGCCTACATCACACAGTATA
ACTACAAACAATCAGAGATTCTAACATTATACAAGACGATGGAATGATTTTTGAAAATGGTGAGGTGCAATCTTGTTTTG
AAGAGATATTAATTTTGTCTTGATGGGGCAATAATAGAATGAGAGAACTTGCTATATTTGGATAGTGTTCAAGCCAATAA
GCCCAACATAACCTGGTGTGTGATACCTTACATGAATTATGCAGTAGTGACAACCGAGTTCTCGTTTCTGGTATGTTTTT
CTCCTTTCTTGAAACAAACAATTGGCTGTAAAGATACTGATATTTTCAACATTTGTGGTTGTTATTTTTGGCTGAAATAT
CCTTTTTGTACTATCAAGATGTTATATATCAGCTCCTCAAATGGCAGAAGGTTTGCAGACCTCATGATAACAAAACAGAT
GG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS----S-----S------------SS---SS-SSSSSSSSS--S------S------------
---------------------------S-------------------------------------S--------------
------------S------------SSSS---------------------------------S-------S---------
---------------------------------------SS--------S------------------------------
-------------------------------------------------------------------S------------
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------------------S-----------------------------------------S-------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
-----------S-----------S--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S------------------------------------------------SSSS
SSSSSSSSS-----------------------------------------------------------------------
-------------------------------------------------------------------S------------
---------------------S----------------------------------------------------------
---------------------------------------------------------S------------S-S-------
------------------S----S---------------------S-----------S----------------------
------------------------------------------------------------------------------S-
-------------------------------------------------------------------S------------
----------------------S----------------------------------------S----------------
----------------------------S---------------------------------------------------
----------------------------------------------------------------------S---------
--S-----------------------S-------------------------------S---------------------
--------------------------------------------S-------S----------S------S-----S---
--
>forward_743
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---AACTTCCTCGCGTGGAATGT---------------------------------------------------------
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--
>reverse_1779
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------------------AGAGTCCTCGAGACGCTTGG------------------------------------------
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--
>forward_746
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------TTCCTCGCGTGGAATGTAGG------------------------------------------------------
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--
>reverse_1919
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------------------------------------------------------------------------------AT
ACATTGCTCAAAGGCCGGT-------------------------------------------------------------
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--
>forward_797
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---------------------------------------------------------GGTCAGCCGAATTTGCAACA---
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--
>reverse_2538
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---------------------------------------------------------TTCATGCGTGGGATGAAACA---
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--
