>input_sequence_58665
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----GCTCCTTCCCCCGCCGCCGCCGCCGC--------CCCCCTAGGATCTGCGCAGCCGACCTCCGCCGTCCACCATGG
TGTGTTGAGCCCCTCTCCGACGATTTGTAT-GTCTCTCTTTCTTCCGTGGCGCATGG-TGATGTGGTAACGAGCGA----
----ATTCTTGGGG-TGCAGCCGAAGCAGATCCACGAGATCAAGGACTTCCTCCTGACGGCGCGGCGGAAGGACGCGCGG
TCGGTGCGGATCAAGAGGACCAAGGACGCCGTCAAGTTCAAGGTGCGCTGCTCCAGGTACCTCTACACCCTCTGCGTCCA
CGACACCGACAAGGCCAACAAGCTCAAGCAGTCCCTCCCCCCAGGTCCGCTCCCTTCTCTCCCCCACCCTCCCACCCCCT
CTGTCC-----CTTCCATGATCAAGTGTTCTGATGAGTCGTTACGCGCATCCAAACACGTACGAGCAGTA---AGTAAAT
CTTGAATGATAATCATAGTGAATTAGTGATGCAAACAATTGTAT---TTTATTTTGCAACATACCCATGCCCAATTGCAT
CAGCTAGAAGCATGTTGGCAGGCCTGGTTGCACGTATCGCTG--------------------------------------
------------------------------------------------------------CTGCGCTGGCCACTCTCTCA
GCAGTGGCCGTCTCACCACCAGTTACCTGTTCATGCTACTACTTCGTAGC-------------------AGTACTGCACA
TATCAGTTAGCACTTGGTCAG----------ATCCTTGTTTGTTCTAATTTG----CATTTCCAGCG-----------AC
CGCATAGTGCAAACTTAGCCTCGTTAATCTCATGTAT--CTGCAATGTATGTGGTCAGACACTATTCAGTTTTGTACATG
---ACTGTATTGGGTCGGTGTGCTCAAATTGTGTTAGTA-TAGGTCCTCAGTTTACGCATTCATTTCTT-GCATCTTATA
TAGTCATTATGACATGTATCTCTTGTGCCGTGCTTCGCTGACCCA----CTGTTGCTCAAATCCCACAGCCAGGCATTTG
TTGTTAACACATACTAACTGTGATCATCGCTTTGCTGCAGGTTTGAACGTCCAGGAGGTTTAAGAAGCATCAAGCCAGAT
CATGCCTTTACC--AGTAGTGCGAATGTTGGATTTAGCAGCGTCTGT----GTTCAGTAAACGAGTTTATTCTGAGTATG
TACTAGACTGAGATGTAATG-TTGGGACCTGTGAGGATTTTGTGTTATTTCACTTGCTGAAGAATGGAGATATGTTACTC
CCTT----------------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G578700
TCACTGCCAGTCGGACCGCTCACACAGATTATGGCCCATTTTCTAGCAATGAAGAGAACATGAGAGCTCCCTAACCAGTT
CCTTCAGCGCTGATGTGTTGCATATCGCACAGGGAGAACATGGGTCGAGGCCCAGTAAGCTTTTACGGTCTATGCTTGCT
TGTTTCACACTTCTCTGTTTT-----TTTTCTGCTTGTTGTTCTTTGCTTTGTTTGCGGATCTTTGTCTCCGGATAAAAC
AACCATG--TTCTTTTTGTTCACTC-AAAAAGTTGGTGAATGTGAAAAAATATTGTAAAATTTTAGAAAGTTGACAAATT
TGAATAAAATTTTTGGATTTGGAAAAAGTCAACTAATTTGAAAAACTTCATGAATTTAG----GAAACTTTAAGAATTTG
AAAAATATGCATGAATATTGAAAATAGTTCAAAATTAGAAAATTTCATGATTTGTTTTGAAAAAAAGGTCTATCTAGAGC
ACATCTAGATTGACCTAGTGGTTGCACATCTAAGTGATTCAATCAAAAGCAAAAAAAGAAAAAGAAAAGAGAATATCCAC
ATGAATCTCCGTGTAGGATCAGTGACATATAACTT---------------------------------------------
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-------------------------------------------AGATGTGCTTGATGTGCAATACTTAGGCCTTGTACAA
TGGGAGATGCTTAGAGAAATGAACCAGACTTTCCTTAAGCACGGGTGCTTATTTACACAGGATGGACGCTTAACTAAGCG
TCTCTCATATAGAAATAGGCACCAGTGCTTCAGAAAAACTCGGTTTATTTTTTAAAGTACCTCCCTAAGCATCTTCCATT
GTATAAGGCCTTAGGGCATATCTAGATATCCCTTAGCAAAAACCGTTTAC------------------------------
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-------------------AAAAAGAAAAGTAAAAAAA----AAACAGA-------------------------------
----------------------------------AAACCGAAAGAACC-ACACTGCTGCATTCCCGCTACATGGG-----
--------------------------------------------------------CCGTCGCGGGTCTGGCCCAT-CCA
TACCACGGCCTGTTGGCCCGAGGTTTTTCTAGGTATAA---ATTCGCTCGCCAGGCATCAGCCGTGTGTTCTCCTCCCCC
CTCTGCTCCTTCCCCCGCCGCCGCCGCCGC--------CCCCCTAGGATCTGCGCAGCCGACCTCCGCCGTCCACCATGG
TGTGTTGAGCCCCTCTCCGACGATTTGTAT-GTCTCTCTTTCTTCCGTGGCGCATGG-TGATGTGGTAACGAGCGA----
----ATTCTTGGGG-TGCAGCCGAAGCAGATCCACGAGATCAAGGACTTCCTCCTGACGGCGCGGCGGAAGGACGCGCGG
TCGGTGCGGATCAAGAGGACCAAGGACGCCGTCAAGTTCAAGGTGCGCTGCTCCAGGTACCTCTACACCCTCTGCGTCCA
CGACACCGACAAGGCCAACAAGCTCAAGCAGTCCCTCCCCCCAGGTCCGCTCCCTTCTCTCCCCCACCCTCCCACCCCCT
CTGTCC-----CTTCCATGATCAAGTGTTCTGATGAGTCGTTACGCGCATCCAAACACGTACGAGCAGTA---AGTAAAT
CTTGAATGATAATCATAGTGAATTAGTGATGCAAACAATTGTAT---TTTATTTTGCAACATACCCATGCCCAATTGCAT
CAGCTAGAAGCATGTTGGCAGGCCTGGTTGCACGTATCGCTG--------------------------------------
------------------------------------------------------------CTGCGCTGGCCACTCTCTCA
GCAGTGGCCGTCTCACCACCAGTTACCTGTTCATGCTACTACTTCGTAGC-------------------AGTACTGCACA
TATCAGTTAGCACTTGGTCAG----------ATCCTTGTTTGTTCTAATTTG----CATTTCCAGCG-----------AC
CGCATAGTGCAAACTTAGCCTCGTTAATCTCATGTAT--CTGCAATGTATGTGGTCAGACACTATTCAGTTTTGTACATG
---ACTGTATTGGGTCGGTGTGCTCAAATTGTGTTAGTA-TAGGTCCTCAGTTTACGCATTCATTTCTT-GCATCTTATA
TAGTCATTATGACATGTATCTCTTGTGCCGTGCTTCGCTGACCCA----CTGTTGCTCAAATCCCACAGCCAGGCATTTG
TTGTTAACACATACTAACTGTGATCATCGCTTTGCTGCAGGTTTGAACGTCCAGGAGGTTTAAGAAGCATCAAGCCAGAT
CATGCCTTTACC--AGTAGTGCGAATGTTGGATTTAGCAGCGTCTGT----GTTCAGTAAACGAGTTTATTCTGAGTATG
TACTAGACTGAGATGTAATG-TTGGGACCTGTGAGGATTTTGTGTTATTTCACTTGCTGAAGAATGGAGATATGTTACTC
CCTTAT---ATCC----TATATAAATTGATTGGATTGCACACCATTTTTCCTCCTTGTTTGTTTTGCATTTCTTTGAAGC
CATGCATTGTTTGTTCTGAGATGCCATATGTC--TGGTTTTGGTGGTTGTGATGGTGAAACCAGTTGTTTTTCT-GGGTC
GGAGGATCCAAGGAAGTTC--TTTTACTTGTGTTATTAGCATTTTGTGTTGTTCTTCTGCAGGATTTAAGCCACGCTATA
TATGTTAGTTATGGTCCCAAATG----------CAGATCCAGTATAATTGTTACAGAGAAAGATACCGGTTTTGTTGCTT
GACATGTCCATATGAATGATATA-AGTTTGTGGGTAGGCAATGTAGATAATTGTGATCACGAAGGGTTGCTA--------
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-----------TTTTACCAGTATATACTGTTGTGCACTATTGCAGTTACCAAGGGACAACAACAAACTGGCTCAGTCCAG
CAATGCAAATGATACTT--GCTCCGCGAAAGGCATTGCTATTGGTATATTCAGGTACACCTAGTTAACACTTTTATATGT
TGAACAACTACACAAATCTGCCATGTA--GTTATACTATGATGCTCGCCGTCGCTGGAATCTGCCATCCCAGTTATTCGC
CGACGATTGGAGTCTTATGTGAGGGTCTGAACAATGCTCTCCTGAAGCTACTAGAGCCTCCTAGTCCTGACTGAGTCCTG
GTATAGTTCATACATTTGCTGAAAACATAGTATTCTGCTCTCCTGCTTGCACTGAATGGAACGAGCGTCTTTCGCCACAA
GATTTCCCCTCCGATGGTTCTCCAAAATATCAAAACTGAGGCGGCAATATGGGTTACCGCCGGTGCCAAGAAATTAGGAA
CAATCATGTCACGAGAGTTATGGACCTTGTGTAATGTCGGTGTGTTCTACAACAAAAAACTCTATTCCTTCTTAATTAGT
AGATGAGGCAGCAAATTTGCCTCAGTCCCTCATGCGCTACATTACACTTCAGTATGCTGCACCTGCAT--GGCTGCTTA-
GTTTGAGTACTTC
>chr3B_1
TCACTGCCAGGCCGACCGCAGACACAAATCATGGCCCATTTTCTACCAATGAAGAGAACACGAGAGCTCC-TAATCAATG
CCTTCAGCGCTGATGTGTTGCATATCGCACATGGAGTATATGGGGCGAGCCCAAGTAAGTTTATAAGCTCTGTGCTTGCT
TGTTTCACACTTCTCTGCTTTGTTTTCTTTCTGCTTGTTGTTCTTTTCTTTGTTTGCGGATCTTTGTCTCTGGATAAAAC
AACTAGG--TTTTTTTTGTTCACTCGGAAAAGTTGGTGAATGTGAAAAAAGATTGTAAAATTTTTAAAAGTTGACAGTTT
TGAATAATTTTTTGGGAATTGGAAAAAGTCAAGTAATTTGAAAAACTTCATGAATTTGGAAAAGAAACTTTAAGAATTTT
AAAA--ATGCATGAATTTTAAAAATAGTTCAAAATTAGAAAATTTGACGATTTGTCTTG--AAAAAAGTCTGTCTAGAGC
ACATCTAGATTGACCTACTGATTGCACATCTAAGTGATTCAGTGAAAAAG-AAAAAAGAAAAAGAAAAGAGAATATCCAC
ATGAATCTCCATGTAAAATCAATGACATATAACTT---------------------------------------------
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-------------------------------------------AGATGTGCCCGATGTGCAATA----------------
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---------CTTAGGACATATCTAGATATCCCTTAGCAAAACCTTTTTGATGCAAAAGTAACATAGAGCATAAATGAGTC
TCTCTGCCGGGATTTTACTGACCTGGAGATCAGTGACGCGTTGTTCCAAATAGGTCCTCTAAAGGCCCCGGGCAGTGACG
GTTTTTCGGCTAGATTCTTCCAAAGAAACTAGGGCGAGCTGAAGAAAGATTTTATTGATGCGGTTAAAAGTTTCTTTGCA
AATGGCATTATGCCGGAGGGCATAAATGATACAGTGGTTGTCCTCATTCCAAAAGGTAATTCCCCAGAGAAGCTTCAGGA
TTTCCGTCCAATAAGTCTCTGCAACGTAATCTGCAAAATCATATCCAAGTGCTTGGTAAATCGGCTTAGACCTTTCCTCC
ATGAACTTATCTCTAAAACACAAAGTGCATTTATCCCTGGAAGATTGATTTCAGACAATGCATCAATAGCTTTTGAATGT
TTTTATAAGATCCAGCAGAACAAGAAGGTGCAAGACAATCATTGTGCATACAAACTGGACCTCACTAAGGCTTATGACCG
TGTTGAGTGGAATTACCTTGAGGGTGTCTTGGTGAAATATGGATTTTGTCAGAAATGGATCTCTTGGGTCATGACTTGCG
TCTGTTCGGTCAGATATGCAGTTAAACTGAATGGGGAAGTGTCGGACTCCTTTTATCCTTCGAGGGGGCTTCGTCACGGA
GACCCCTTAAGCCCGTACCTTTTTTATGTTTGTTGCTGAAGGTTTACCCCACGCACTTGAAGAAGAATGCGATGTGTCGA
ACATTACTCCCCTGAAGGTTGCAAAAGAAGCTCTAGGAATTTCACATTTGTTGTTTGCTGATGATAGCTTGCTTTTCTTT
AAAGCGGAAGGTGGAGAAGCAAAGAGTGTCAAGTATGCCCTAAATGTTTTTAGAGAGGTACGGGCCAACTTTTGAGTCCT
AGTAAGTGCTCTATATTTTTCGGTAGCACCTGCCCAGAGGAAATCCAGGAAGAGGTCTTGAATACCCTGGATCTCACATC
ATCTACTTTTGAGGAAAAGTACCTTGGCCTTTCCACTCCGGAAGGAAGGATGAAAGAATCCCATTTCCAACCAATCTTTG
AGAGGTTTACGAAGAGGCTTATTGATTGGTTTGAAAGATTCATGTCATATGGTGCAAAAGATATCTTGGTAAAGTCTGTT
GCTCAAGCTTTACCCACATACACCATGAGTATTTTCAAAATGAGTGCAGGTTTTTGCGAAAAATATGAAAAGCTGGTGAG
AGACTTCTGGTGGGGAGACGAGAAGAACAAAAGAAAGGTACATTGGATGTCCTGGAAAAAAATGACAAAGCCAAAATGTG
AGGGTGGTCTGGGCTTTCGTGATATGTGTATCTCCAATCAAGCTCTTCTTGCTAAGCAAGCATGGAGACTCATTCAAAGA
ATGAATAGCTTATGTGCCAGAGTGTTGAAGGCTAAATAGTACCCAAAAGGAAAATTGTTAGATATGGTTTTCAACGTCTG
ATGCTTCACCTGTATGGAGAGGAATTGAATATGGGCTTGAACTCCTAAAACAGGGCATGGTTTGGAGGCTAGGCGATGGA
AAGCGTATCCAAATAATGCGGGATAACTGGATTCCTCGTCAGCCGGGCCTCTCGATACAGACCATGAAGAGTAGGAGCAG
ACTCAGATGGGTCCATCAACTAATTGATCCTCGGTCTAAGGAGTGGAACACGCAAATCATTGACAATTTGTTCTACAGCT
TTGATGCTGAGGAGATCTACAAGATCAGAATCCCCTCTATCCCTATGGAAGATACTCTCGCATGGAACTATGAAAAAAAT
GGTATTTTCTCGGTAAGGAGTGCCTACAAGCTGGGTAAGTCTTTGCAGGATGGACCGGGTGTAAGTTCCTCGGCAAACTG
TGGTAATGGCAGGGAAAGCTTATGGAATTTAGTGTGGAAAGCTAAAGTTTCTCATAAAATTCGTATTTTCGCTTGGAGAA
CTGCCACTGACTCTCTGCCCACAAAGGAGAATAAGCACAAGAGGATACTTGAATTGGATGGAGTCTGCAAAGTCTGTAGA
AACGGAACTGAAAATGCATTCCATGCTATAGTGGCCTGCACAAAGCAAAGAGCACTCAGAGAGGAAATGAGGAAATACTG
GAATCTACTGGATGAAAAAACTATTATGGCCTTTTCCCCCGACTGGATGTTACAAAACTTAAGTTTGTGTTCAGGAGATA
TGAGAGAAAAATTCCTACTAGTTCTATGGAGATCTTGGCATATAAGGGATGACGCCATTCACAGCAAAGGAGAAGCTTCT
ATCAGAGATTCGGTGTTGTTCCTAAAGTCCTACTGGGAGTGCTTGAACTCTGAAATCCCTGTTGTAAATGATAGTAAAGG
TAAACAGAAATTGCATGAAGTGTCAGTGCCAGCTCCTAGCATCCCTCGACCTGACATTGGCTGGACAAAACCTCCTGAGA
AGTACATTAAAATCAAAGTTGATGCGTCCTTCATACACTCCTTGGTTTTATCTGCTGTGAGTGCCATTGGTAGAGACAGT
TTGGGTGTTGTGTTATTCTCGGTAGGCTGTCGTATTCAGGGTTGCACGGATGCGGAGGAATCTGAAGTTTGGGCGTTGTC
CTTTGGACTAAGACAAGCTAGCAATTTGTCACTAAACTGTTTCTGGTGGAATCTGACTGCACTACCGTGGTGTCTCCAGT
ATCTGACTGCAACATTAGCAGAATCATGTGGTGGGCAAGCTATGAGGAGTCAAAGAGGTTGATGACAGCTTTTGAGTCTT
GTACTATGACCAAAACTGAGTGCAATGTGGCCGCACATGAGTTAGCTACGTATGCTAGAATCCATGGTGATTTCCTCTTC
TTAGTTGATGTGCCACATAGTGTGAAACATGTAATCATGTCCGACTGTATTCCTGGATAAATGCAATGCAAGGCTCCCTT
TATCCTCAAAAAAGAAAAGAAAAAGAAAAGTAAAAAAAC--AAAACAGA-------------------------------
----------------------------------AAACCGAAAGAACC-ACACTGCTGCATTGCCGCGTTCTCCTCG---
-------------------------------------------TTGCCACTTCGGCCCGGCGTGGGTCTGGTCTATCCCA
TACCACGGCCTGGTGGCCCGAGGTTTCTCTAGGTATAATAAATTCGCTCGGCAGGCATCAGCCGTGTCTTCTCCTCCCCC
CTCTGCCCCTTCCCCGCCGCTGCCG--------------CCCCTAGGATTTGCGCAGCCGACCTCCGTCGTCCACCATGG
TGAGTTGAGCCCCTCTCCGACGATTTGTAT-GTCTCTCTTTCTTCCGTGGCGCATGG-TGATGTGGTAACGAGCGAGCGA
ACGAATTCTTGGGG-TGCAGCCGAAGCAGATCCACGAGATCAAGGACTTCCTGCTGACGGCGCGGCGGAAGGACGCGCGG
TCGGTGCGGATCAAGAGGACCAAGGACGCCGTCAAGTTCAAGGTGCGCTGCTCCAGGTACCTCTACACCCTCTGCGTCCA
CGACACCGACAAGGCCAACAAGCTCAAGCAGTCCCTCCCCCCAGGTCCGCTCCACCCTCTTTGTCCCTC-----------
-CCTCCGGTTTGTTCCATGATTAAGTGTTCTGATGAATCATTACGCACGACAAAACACATACGAGCAGTA---AGTAAGT
ATGGAATGGTAATCATTGT--------GATGCAAACAATTGT-T---TCTGTTTTGCGACAAACCCATACCAAATTTTAT
CAGCAAGAAGCAT-------------GTTGCACATATCACTG--------------------------------------
------------------------------------------------------------CTTCGCTGGCCACTCTCTCA
ACAGTGGCCATCTCACCACCAGTTACCTGTTCCTTG------------GT-------------ACTACTAGTACTGCGCA
GATCAGTTAACACTTGGTA--------------CCTTGTTTGTTCTAATTTG----CATTTCCAGCGGTGATGTTGTGAC
CGCATAATGCAAACATGGCCTCGTTAATCTCATA-ATATCTGCCATT---------------TATTCAGTTTTGTGCATG
---ACATGCCT-----------CTTAAATCGTGTT--TAGTAGGTCCTCAGTTTACTCACTCATGTTTTTGCATCTTATA
TAGTCATTATGAGATGTATCTCTTGTGCCGTGCTTGCCTGACCCA----CTGTTGCTCAAATCCCACAGCCAGCCATTGT
T-GTTCATACTTGCTAAATGTGATGATCTTTTCGCTGCAGGTTTGAACGTCCAGGAGGTTTAAGAAGCATCAAGCCAGAT
CATGCCTTTACTCTAGTAGCGGGAATGTTGGATTTAGCAGCGTCTGTCTGTGTCCAGTAAACGAGTTTACCATGAGTATG
TTCTAGACTGAAACGTAATGTTTGGGACCTGCGAGGATTCTGTGTTATTTCACTTGCTGGAGAATGGAGATATGTTACTC
CCTTAT---ATCATACGTATATAAATT-----GATTGCACACTATTTTTCCTCCTGGATTGTTTTGCATTTCCTTGAAGC
CATTCATTGTTTGTTCTGAGATGCCATATGTC--TGGTTTTTGTGGTTGTGATGGTGAAACCAGTTGTTTTTCT-GGGTT
GGGGGATCCAAGCAAGTTC--TTTTACTTGTGTTATTGGCATTTTGTGTTGTTCTTCTGCA-GATTTAAGCCACGCTATA
TATGTAAGTTATGGTCCCAAATGCAG-------CAGATCCAGTATAATAGTTACAGAGAAAGATACTAGTTTTGTTGCTT
GACATGTCCATATGAATGATATTTAGTTTGTGGGTAGGCAATGTAGATAATTGTGATCACGAAGGGTTGCTA--------
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-----------TTTTACCCGTATATACTGTTGTGCACTATTGCTCCGCC-------------------------------
---------------------------AAAGGCATTGCTATTGGTATATTCAGGTACACCTAGTTAACACTTATATATGT
TAAACAACTACACAAATCTGCCATGTATAGTTATACTATGATGCTCCCCATCGCTGGAATCTGCCAACCTAGTTGTTCGG
CGACGATTTGAATCTTATGTGAGGGAATGAACAATGCTCTCCTGAAGCTACCAGAGCCTCCTAGTC--------------
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-----------------------------------CTGAGGCGGCAATATGGGTTACCGCCGGTGCCAAGAAATTAGGAA
CAATCATGTCGGGAGAGTTATGGACCTTGTGTAATGTCGGTGTGTTCTACAACAAAATACTCTATTCCTTCTTAATTGAT
AGATGAGGCATCAAATTTGCCTTAGCCCCTCATGCGCTACATTACACATCAGTATGCTGCACCTGCATATGGCTGCTTA-
GTCTGAGTACTTC
>chr3D_1
TCATTGGCAGTCCGGTCCCACACAAAGATTATGG-CCATTTTCTAGCAATGAAGAGAACACGAGAGCTCC-TAATCAGTG
CCTTCAGCTCCGATGTGCTGCATATCGCACAGGGAGCACATGGGTCGAGGCCCAGTAAGCTTTTACGCTCTGTGCTTGCT
TGTTTCACACGCTTATGCTTGTTTTTTTTTCTGCTTGTTGTTCTTTGCTTTGTTTGTGGATCTTTTTCTCTGGATAAAAC
AAATAAG--TTTTTTT-GTTAACTCAAAAAAGTTGGTGAATTTCAAAAAATATTGTAAAATTTTAAAATTTTGA------
-----ATATTTTTTTAATTTCGAAGAACTCAATAAATTTAAAATACTTCATAAATTTGGGGAAAAACTTT----------
-AAATTATGCATGAATTTTAAAAATAGTTAAAAGTTTGAAAATTTCATGATTTGTTTTGA-AAAAAGGTCTGTCTAGAGC
ACAGCTAGATTG--CTAGTGATTGCACATCTAAGTGATTCTATCAAACAT-AAAGAAGAAAAAGAAAA-AAAATATCCGC
ACGAATCTCCGTGTAAAATCAATGACATAAGAGTTTTTTTTGCGGGGTGAAAGAGAGTTTTATTCCATAGAAACAGAGTT
ACAATCTGTAAGTGCATCTAGTGCCACCCCTAGTTGGTTTTGGAGTATTGACGACAAACCTGGTTGAGGGACTAATGTGT
TTGTGAGAATTGCAGGATAACACAGGTAGTATTCCCTCATTGATTCGGTTTACCTACCGGAGATGACCCCTAAAAATGCA
TGAAGACATTGAAGACAATGGTGGTATGTGAAGATATTCACATTGAAGACTATGACAAGAGAAGACATCGCGTGAAGACT
ATGGAGCGCGAAGACATAGTTGTTTCCTTTTCTTCTTTGTTGAGTCGTAGGAACCACCGTACTATTAAGTGGGGTCCCAG
TGAACAAAGTCAGAGTGACTGAAGTGATGCTCAACCAAATCATATGTCTTCGAGCGAAGACAATAAGAGCAAATCTTATC
CAGAGCTGGATGAGTCAGCTTTACTTGTAGCCCAAGTCAAGTTGCCGCGTGTGTTTGAAATCCGACCGTTGGAACACGTG
TCAGTTCCTTAGTGACCTAGGGTCATTTCGGACAAATCAGGTCGGGTTGCCTAGTGGCTATAAATAGCCCACCCCCTACA
CCATAAATTGGTGGCTGCTCAGAGTTCGTGCACGGCTTTTGTTGTTTGAGAGCAACCCACCTCCGAAGCTTTCGAGAGAG
AGAAATCCTTGCGAGGACAAAACCCAAACACCCAGAGCCAAAGAGTGTTAGGCATCACTAAAGTCTTTCTGTCCGCGTGA
CCTGAAGACTTGTTACACTTGACGACTGTGAATCCTCCAGCCGGTTAGGCGTCGCATTCTGAGCATCCAAGAGTCATTGT
GGATCGCCGGTGAACGAAGTCTGTGAAGGTTTGGAAGTCTACCTTGAAGACTTACCAGAGTGATTGGGCGAGGACTGGGT
GTGCTTAGCTCAAGGGGGATAAGGTGAAGACACGGTCTTCTGAGTTAAATCTCAGCCTCCCTAACCAGATGTACAGTTGT
CACAGCAACTGGAACTTGTCCAACAAATCCTTGTCTTCACCAAGCGACTGGTTCTATCGTCTCCCTCTCTTTACTTACAG
TTTGTCTTCGTGAAGTCATTGCCTGTTTGCATTACCTGTTTGACTTCACTGTGTGACTATTATTGTTGTTTGGCTTCATA
CTATCTTTCATCCTGATCCCTACTACCTAGCTGCTATTAGTCTTCGTGCTTTCACTTCATTGAATACTTGACTATGGCTT
GTCTAGTGTAGTCTACCTTCCGCTGCATATCAATAGGTTCATTCTATTGTTTGTCTTCAAAACTCTCATGTTTTGAAGAC
TTTCATAAAAATCGCCTATTCACCCCCCCTCTAGTCGATAACTAGCACTTTCACAATCAGTTGGCAAAAGCTTAGCGATA
CAAGGTGGGCAATTCTGCAGCCAACAGCCGTGCTACACTGTAACCTCCCATAGTTTGTGAGGCAATCTGCTACCTTGGTT
TGGCTTCTAGAAAATTTCAAAGGAAAAAACTCTCTACCGACTAAAAGAAACTTAATCTCTGAGATTAAATGACCTTATGC
TGACCAGTCCAAAATATCTGAGGCTAATGAAGAAAGAACCATAGAGGAATAAAACTGTATTACCACCGGTAGGTTTGATC
GTTCCATGGTGATCGCAAGACCTTCTCTCAACGCATCTGGTTCCGCTTGAAGCTCATCGTTACAGAAGAAAAGGTAACGA
TAGGCTGCAAAGATCAGTCCACCATCTGAATTTCTTAGGATCATCCCTGAACCCGCGGTTCCATCAGAGGAAAACGAGCC
ATCCATCGACAAGGCGACTTGCCCAGTAGCCGAAGCATGCCATGGATTAGACCGTGAAAGTGTTTTATTCCTCTGTTCAT
GTGCGAACTCATACTCCACCATCTTGCATCTTATCATCTCCTCTACGCTATACTTCTTTGCATGCCATATAGGGTGCAAG
TAGCTGTTAAGAAAATCAACAGAAATATGTACCGGGACGTGGTATTTACCATGTAGCACGTCCGTCCTCAAATTCCAAAT
TCTCCATATTAAAATAAGGACCATGTCTCGCACTCGTTCATTACTGTTTGCAAGCACATTAAGCAACCATTCCTGTCCCG
AATCAATAAGATTTTCGTTACTTGGGAGCGGCCAGATCGTCCGCATGCCTTCCCGTAGTTGCACTGCTGCTATACACGAC
ACCAAGGCGTGGAAAGAGCTCTCATCTTCGACACCGCACAACGGGCAAGTTCTGCGAGTATGAAGGTGTCTATATTGCAT
GCATTTAAAAGTAGCGAGAGCACCCGTCGCTGCCTACCAAGCCATAACTTTCATTTTTTTTGTGGGACGTTTGCTTGCCA
AATAAGACTCCAAATTGGTCTTGTACCACCATGTTGAGCACTAGAAGCGCTTGAAGAAAAGGTCTCCTCATGATTTTGCA
TAGCCAAATGGTAGGCACTTTTCACCGTGAATTGCCCACTTTTCTCTGGCTGCCAGGCAAGGAAATCATCACGCTGCCTC
GACGAGGTGCGAATCTTACGAATTTGCAAAATATCCATAGGCCAGAAGTACCCGATGTGCAATA----------------
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---------CTTAGGGCATATCTAGATATCTCTTAGAAAAACCATTT---------------------------------
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-------------------AAAAAGTAAAGTAAAAAAATTAAAACAGAAAACCGAATAAACCAAAAATAAACAGGAAAAT
AATCCAAGCGAAGG-AAGCTTATGCAATGCTCCCAAACCGAAAGAACATTCACTGCTGCATTCCCTTATATGGGCCGTCC
CCGTCCCGTTTAAGAATAC-------------------------------------CCGGCCCGGGTTTGGCCCAT-CCA
TACCACGGCCTGATGGCCCGAGGTTTCTCTAGGTATAA---ATTCGCTCGCCAGGCATCAGCCGTGCCTTCTCCTCCCCC
CTCTGCTCCTTTCCCCGCCGCCGCCGCCGCCGCCGCCGCCCCCTAGGATTTGCGCAGCCGACCTCCGCCGTCCACCATGG
TGAGTTGAGCCCCTCTCCTCCGACGATCTGCGTGTCTCTTTCGTCCGTAGCTGCTGGATGATGTGGTAACGAACGAGCGA
ACGAAATCATTGTGATGCAGCCGAAGCAGATCCACGAGATCAAGGACTTCCTGCTGACGGCGCGGCGGAAGGACGCGCGG
TCGGTGCGGATCAAGAGGACCAAGGACGCCGTCAAGTTCAAGGTGCGCTGCTCCAGGTACCTCTACACCCTCTGCGTCCA
CGACACCGACAAGGCCAACAAGCTCAAGCAGTCCCTCCCCCCAGGTCCCTTCCGT--TCTCCCCCACCCTCTTGTCCAGC
TCTATC--TTTGTTCATTGATTAAGTGTTCTGATGAGTTCTTACTAATTACGCACAGAAAATCACCCGCGAGCAGTAAAT
CTTGAGCGATAATCATAGT--------TATGCAAATAATTGT-T---TTTATTTTGCAACAAACCCATGCCCA-----AT
CAGCTAGAAGCATGTTGGCAGGCCTGGTTGCACACATCACTG--------------------------------------
------------------------------------------------------------CTGCGCTGGCT---------
--------------ACCACCAGTTACCTGTTCCTTGTACTACTTCGTAGT-------------AGTAGTAGGACTGCACA
GATCAGTTAACACTTGGTCAGGTGT-ATGTTGTTCTTGTTTGTCCTAATTTGTTTGCATTTCCAGCG---ATGTTTTGAC
CGCATAATGCAAACATAGCCTTGTTAATCTCGTATAT--CTGCAATGTGTGTGGTCAAACGCCATTCAGTTTTGTACATG
ACTACTGTATTGGGTAGGTATGCTCAAATTGTGGTAGTACTACGTCCTCAGTTTACGCATTCATTTCTT-GCATCTTATA
TAGTCATTGTCACATGTATCTCTTGTGCCGTTCTTCGCTGACCCA----CTGTTGCTCAAATCTTACAGCCAGCCATTTT
TTGTTAACACTTACTAACTGCGCTGATCTTTTCGCTGCAGGTTTGAATGTCCAGGAGGTTTAAGAAGCATCAAGCCAGAT
CATGCCTTTACC--AGTAGCGGGAATGTTGGATTTAGCAACGTCTGT----GTTCAGTAAACGAGTTCGCCATGAGTATG
TTCTAGACTGAAATGTAATGTTTGGGACCTGTGAGGATTCTATGTTATTTCACTTGCTGGAGAATGGAGATATGTTACTC
CCTTAT---ATCC----TATATAAATTGATTGGATTGCACACTATTTTTCCTCCTTGTTTGTTTTGCATTTCCTTGAAGC
CATTCATTGTTTGTTCTGAGATGCCATTTGTCTATGGTTTTTGTGGTTGTGATGGTGAAACCAGTTGTTCTTCT-G-GTT
GGAGGATCCAAGGAAGTTGTTTTACTTATCTATGG-----------------------------TTTAAGCCGTGCTATA
TATGTTAGTTTTGGTCCTAAATGTTTTAATCTACAGGTCCAGTATAATAGTTAAGGAAAAATATACTTGTTTCGTTGCTT
GACATACCCATATGAATGGTATA-AGTTTGTGGATAGGCCATGTAGATAATTTTGATCAC--------------------
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>chr3A_1
TCACTGCCAATCCAGCCCCACACACAGATTATGGCCCATTTTCTAGCAATGAAGAGAACACGGGAGCTCC-TAATCAACG
CCTTTAGCGCCGATGTACTGCATATCACATAGGGAGCAAATGGGTCGAGACCCAGTAATCTTTTACGCTATGTGCTCGCT
TGTTTCACACGCCTTTTCTTGTTGTTCTTTT----------------CTTCATTTGCGGATCTTTGTCTCCGGATAAAAC
AACTAAGTTTTTTTTT-GTTAACTCGAAAAAGTTGGTGAATATGAAAAAAGATTGTAAAATTTTAAAAAGTTGACAAATT
TGAATAAATTTTTTGGATTTGGAAAATATCAATGAATTTTAAAAA--------------------AACTTTATAAGTTTT
AAAAATACGCCTGAACTTTAAAAATAGTTCAAAATTAGAAAATTTCATGCTTGGTTTTGA-AAAATGGTCTGTCTAGAGC
ACATCTAGACTGACCTAGTGATTGCACATCTACGTGATTCAATCAAATCAAACATAAATT-----AAA-AAAATATCCGC
ACGAATCTTCATGTAACATCAATGACATATGACTT---------------------------------------------
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-------------------------------------------AGATGTGCCGGACGTGCAATA----------------
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---------CTTAAGGCATATCTAGATTATATTAGC--AAAACCGTTTGA------------------------------
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-------------------AAAAAGAAAAGCGAAAAACC--AAACAGAAAACCGAATAAACCAAAGATAAACAGGAAAAG
AAACCAAGCGAAGGAAAGCTTATGCAATGCTCCCAAACCGAAAGAACC-TCACTTCTGCATTCCCTCTATATGGG-----
CCGTCCCGTTTAAGAAATGGTCATCCTTGTTGCGCGTTCTCCATTGCCACTTTGGGCCGGCCCGGGTCTGGCCCAT-CCA
TACCATGGCCTGATGGCCCGAGGTTTCTCTAGGTATAA---ATTCGCTCGCCAGGCATCA-CCGTGTCTTCTTCTCCTCC
CCCTGCT-CTTTCCCCCCCGCCGCCGCCGCCTCC-----CCCCTAGGATCTGCGCAGCCGACCTCCGCCGTCCACCATGG
TGAGCCCCTCTC--CTCCGACGATTTGCAT-GTCTCACTTTCTTCCGTGGCGCATGG-CGATGTGCTAACTAGCGAACGT
----ATTCTTGGGG-TGCAGCCGAAGCAGATCCACGAGATCAAGGACTTCCTGCTGACGGCGCGGCGGAAGGACGCGCGG
TCGGTGCGGATCAAGAGGACCAAGGACGCCGTCAAGTTCAAGGTCCGCTGCTCCAGGTACCTCTACACCCTCTGCGTCCA
CGACACCGACAAGGCCAACAAGCTCAAGCAGTCCCTCCCCCCAGGTCCGCTCCCTTCTCTCCCCTACACACCCTCTTTTT
TCCTCGGATTTCTTCTATGATCAAGTGCTCTCGATT---GTTACGCACATCAAAGAACATACGAGCTGCA---AGTAAAT
CTGGAATGTTAATCATTGT--------GATACAAACAATTGT-TATTTTTATTTTGCAATAGACCATCATCCAACTGTAT
CAGCTAGAAGCATGCTGGCAGGCCTGGTTGCTCATACATGGTGCTATCAGCATAGCAAAACACACCTACGAGCATAGTGA
CGCAAGAAATTGTTTTTATTTTGCCACAGACCAATACCCAGTTGTATCAGTTGTAATTGTCTGTGCTGGCCACATGGCCA
GCTTTGGCAA---------CAGTTACTTGTTCTCTGCAATGCCATGGCACTATTTAGTTGTAGACTTGTAGTCCTGCACA
GATCAGTTAACATTTGGTCAGCTCTAATGTTATCCTTGTTTGTTAGAATTTG----CATTTCCAGCGATGTTGTC---AC
CGCATAATGCAAACATAGCCTCGTTAATCTCATATATATCTGCCATGTTTGTGGTTAAACACTATTCAGTTTTGTACCTG
---ACTGTATTGGGTAGGTTTGCTCAAATTGTGTT--TAGTAGG------------------------------CTTATA
TAGTCGTTATGACATGTATCTCTTGTTCCATGCTTCCCTGACCTACTGTCTGTTGCTCAAATCCCACAGCCAGCCAGTTT
T-GTTAACACTTACTAACTGTGATGATCTTTTCGCTGCAGGTTTGAACGTCCAGGAGGTTTAAGAATCATCAAGCCAGAT
CATGCCTTTACTCTTGTAGCCGGAATGTTGGATTTAGCAGCGTCTGT----GTCCAGTAAACGAGTTTACCATGAGTATG
TTCTAGACTGAAATGTAATCTTTGGGACCTGTGAGGATTCTGTGTTATTTCACTTGCTGGAGAATGGAGATATGTTACTC
CCTTATTATATCC----TATATAAATT-----GATTGCACACTATTTTTCCTCCTGGATTGTTCTGCATTTCCTTGAAGC
CATTAATTGTTTGTTCTGAGATGCCATATGTC--TGGTTTTTGTGGTTGTGATGGTGAAACCAGTTGTTTTTCTGG-GTT
GGAGGATCCAAGGAAGTTTTTTTTTACTTGTGTTATTGGCATTTTGTGTTGTTCTTCTGCAGGATTTAAGCCACGCTATA
TATGTTAGTTATGGTCCCAAATG----------CAGATCCAGTATAATAGTTACAGAAAAAGATACTGGTTTTGTTGCTT
GACAAGTCCATATGAATGATATA-AGTTTGTGGGTAGGCAATGTAGATAATTGTGTTCACGACTTGTACGGCTTCTGTTT
TCATGTTGCGTGGGTATTTGGATTTCAGGTATCTTATGTATGGATCAGTCATTTGGTCGATTGTTTTCAAGCTTGATTGT
TGGTTAAGAATTTGTACCCGTATATACTGTTGTGCACGATTGCAGTTACCAAGGGACAACAACAAACTGGCCCTGTCCAG
CAATGCAAATGATACTTTTGCTCCGCGAAAGGCATTGCTATTGGTATATTCAGGTACACCTAGTTAACACTTTTATATGT
TGAACAACTACACAAATCTGCCATGTA--GTTATACTATGATGCTCGCCGTCGCTAGAATCTGCCATCATAGTTATTCGG
GGACGATTGGAGTCTTATGTGAG---------------------------------CCTCCTAGTCCTGACTGAGTCCTG
GTATAGTTGATACATTTGCTGAAAGCATAGTACTCTGCTCTCCTGCTTGCACTGAATGGAATGAGCGTCTTTTGCCACAA
GATTT-----CCGATGGTTCTCCAAAATATCAAAACTGAGGCGGCAATATGGGTTACCGCCGGTGCCAGGAAATTAGGAA
CAATCATGTCGGCAGAGTTATGGACCTTGTGTAATGTCGGTGTGTTCTACAACAAAAAACTCTATTCCTTCTTAATTAAT
AGACGAGGCAGCAAATCTGCCTTAGCCCCTCATGCGCTACATTACACTTCAGTATGCTGCACCTGCAT--GGCTGCTTGT
GTTTGAGTACTTC
>SNPs
------------S------S----------------------------------------S---------S---S----S
------------------------------------S------------------------------S---S--------
-----------------S--------------------------------------------------------------
---S-S-----S-----------------------------------------------------S--------------
--------S-----------------------S------------------------S---------------------S
----------------S--S----------------------------------------S----------S--------
--------------------S---------------------------SS------------------------------
---------------SS----S----------------------------------------------------------
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---------------------------------------------------SS-----------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS---------------------------------------SS------------------------------
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---------------------------------------------------------------------S----------
-----------------------------------------------------------S--------------------
------------S-------------S----------------------------------------S------------
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--S-----------------------------------------------------------------------------
----------------------------------------------------S---------------------------
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-------------------------------------------------------------------------S---SS-
SSS-------------------------------------------S----S------S---------------------
-------------------SSSSSSSS---------------S------------------S---------------S--
---------------------------------S----S-----------------------------------------
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---------S----------------------S-SS--------------------------------------------
S--------S----------------------------------------------------------------------
------S-------S------------------S--------------S--------S----------------------
---------------S---S------------------------------------------------------------
-------------------------------------------------------------------------S-----S
----------S-------------S---SS--S-----------------------------------------------
-------------------S-S-----------------------------------------------SSS--------
-S---------S---------------------------S-------------------S--------------------
------------------------------------------S-----------------------------S-------
---S-------------------------------------S-------------------------------------S
-------------------------------------S------------------------------------------
------------------------------------------------S-----------------S-------------
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------------------S----------------------------------------------------S-S------
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---------------------------------------------------------------------S---------S
-------------------------SS------------------------S----------------------------
--------S---------------S-------S----------------------------S----------S-------
-----SSSSS----------------------------------------------------------------------
----------SS------------------------------------------------------------------S-
----------------------S--S------------------------------------------------------
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>forward_148
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------------------------------------------------GGCCCAGTAAGCTTTTACGG------------
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>reverse_7785
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------------------------CATCGCTTTGCTGCAGGTTT------------------------------------
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>forward_7527
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-------------------------------------------------------------------CATTTCCAGCGAC
CGCATAG-------------------------------------------------------------------------
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>reverse_9063
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----------------------CAGTCCCTCATGCGCTACAT--------------------------------------
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