>input_sequence_58644
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----------------------------------------ATGAAGCCTATGGTGAGGTCCAACAGTGGCGGCGGCAGCG
ACCGAAGGTTAGTTTCGCGATCATATCTCAAAATTGGTGATCGATTTTTTTGGCTTATTTCTCAGGTTACAAATGAGCCA
ATCTATCTATTGCGAGGACATTGCTTTAAATAAATGTAGGTGCACACCTAGAAAAACAGATGAAAAAAACCCTGCCCTAA
CTTCATTCTTCTATCTGTCCTTTACGGTGATTTGATGTGATGAAGGGGTTGGCTAGCGTGGAGGAAGACAAAGTGTGGCA
AGAACTCCAACATGCCCAAGCAGCCTCCCAGTGCCTTCTTTTTGTTTCTGTGAGTTAGATTATTTTGTTTCCTCTCGATT
GTATTTGCATTGTTTGTTGCTCTAAATTAATCTGAATCCAAATATGTGTGTGTCGTTGATGAAGAGAGGATTTTAGTCTG
GAGTACAAGTTGGAACACCCGAACGTCAAGGTGTCCTCAGTGGTAAGCATCAAATCTTCTTCCCACCTATTAGATTGATT
AGTTTTCTTATGTTCCTGCCTTTAGTTGGTTTGCACTAATTGGTTTTGTTGTGGTTTCGAACTATGCTCAGCTTTGCCTC
CGGACAAAACTGAGCATAGTTCGAAACTCGGGGTAAAACCGAATAGTGGGAACCAACTAAGCGGACGAATGTAAGAACCC
ATGATTATGGTTATTGCTTGGTCTTGAAATTTACACTTGTTCACAGATCAACAAAGCAGGTGGTGATCGATGGCGAGCTA
TGTCTGATGCAGTGAGTTGATGAAATCTTATTTTGTTCCAGTAATATCTATTCTTACTGACCGTGTAGCGGGGCGAATCT
ACCAGGATGTGCCAATATTACTAACATCCGTGCCATATTTGATTTTCTGATCGAAATGCAGGATAAGGCGTCGTATTGCG
TCATGGCTGAGCACCGTAGAGCAGAGTACGCCAAGGCGATGGAAGCGTACAATAACCCAGGGGAACCCGGCCAGCATGAG
GTGGCCCACAAGGTGGAGCCGGCTGATGTGATGTACAACCAAGGGGAAGTCGGCCAGCGTGAGGTGGTGGAGCATGACGC
GCTGGCGCCATCGACGACCACGAGGTCGAGCCTGCGGATGAGATGTCGAATGGTGCCAACCTCAAGCCATGGAACACTGG
CGATGACCTAG---------------------------------------------------------------------
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------------
>chr3D_1_TraesCS3D01G497500
AAATAGGCACATGCGAACCAAAATTGATAACACTAATAGTTATCAGGAAGCTCACCCTTTGTGCTGATCCCACCTGTACT
ACTCGGCAAGTGCATGAAAACGATGGCCACAGTAGGTTCAGCTGGATATTCTCTTGACTGTACTCGAGCAGTGGCCATGG
TCTTGGTCGGAGCAATGTAGCTTAGTTGAAGCAGACACCCTATGGGTACAACAAGACTGGTGATCTTGAGCCTGAAATTC
GCAAGATACTAAGATGGACTGCACAAAAGACATAGCTGACCGCCATTATGCAGCACCCAAGTTCACACCGCCCATTAGTT
GCATTATCTGCTGACTCAAAACATAAAGAGCTCTTTGCACTGTAGGGATCCAGTAAACAACCTTCTCAGAAGGACATGGT
TTCTGCTGCACACTTTGCAGATGCCTCAAGGATTCTCTCAGGGAAGTCAGATCACGACAAAAATGCTTCATCACTTAGTA
ACTTGCAGCGTCTGACCTGCATACTTCAGATGCATGCCTCCATAAAAGCAGTCAAACGACGGACATGGTCTCAGGCTGAA
CATGTGCCCCTTGTGTCTGATCCACGCTCGCAAAAAGTGGAGGGCATGGTTGCCGTCTTCAGGATGATATAGTCACAGGT
TTTCACTTTTTAGTGAGTGAAAGATTTGTATCTGGCCCTTCTCTATTTCTTAGCTAGCGTAGTTTTTCACCTTCAAAAGA
AGGCGAGGACTTTATACCAGTAGATCGGCTCAATTTAGGTTGTCCTGTTGCTACTTTTGTGTCGCTCATGCTGGCTTGCT
TGATGCTAATTAATGTGGTTGTTTGCACCGGTAAGCATTTACCTATTTGTGATGTATAAATCAAATCTATGTTGATGCAG
TGCTGTGATGTCTGAAATATTTTTTTTATCATATTTTGGGCAGCGATGTAATTATTGTATCAAAAGCCGATAACACTGGT
GAATGTTACAGATCCTTTGTTCGCCAAGCGATTTGAAAAGATGAAGCCTATGGTGAGGTCCAACAGTGGCGGCGGCAGCG
ACCGAAGGTTAGTTTCGCGATCATATCTCAAAATTGGTGATCGATTTTTTTGGCTTATTTCTCAGGTTACAAATGAGCCA
ATCTATCTATTGCGAGGACATTGCTTTAAATAAATGTAGGTGCACACCTAGAAAAACAGATGAAAAAAACCCTGCCCTAA
CTTCATTCTTCTATCTGTCCTTTACGGTGATTTGATGTGATGAAGGGGTTGGCTAGCGTGGAGGAAGACAAAGTGTGGCA
AGAACTCCAACATGCCCAAGCAGCCTCCCAGTGCCTTCTTTTTGTTTCTGTGAGTTAGATTATTTTGTTTCCTCTCGATT
GTATTTGCATTGTTTGTTGCTCTAAATTAATCTGAATCCAAATATGTGTGTGTCGTTGATGAAGAGAGGATTTTAGTCTG
GAGTACAAGTTGGAACACCCGAACGTCAAGGTGTCCTCAGTGGTAAGCATCAAATCTTCTTCCCACCTATTAGATTGATT
AGTTTTCTTATGTTCCTGCCTTTAGTTGGTTTGCACTAATTGGTTTTGTTGTGGTTTCGAACTATGCTCAGCTTTGCCTC
CGGACAAAACTGAGCATAGTTCGAAACTCGGGGTAAAACCGAATAGTGGGAACCAACTAAGCGGACGAATGTAAGAACCC
ATGATTATGGTTATTGCTTGGTCTTGAAATTTACACTTGTTCACAGATCAACAAAGCAGGTGGTGATCGATGGCGAGCTA
TGTCTGATGCAGTGAGTTGATGAAATCTTATTTTGTTCCAGTAATATCTATTCTTACTGACCGTGTAGCGGGGCGAATCT
ACCAGGATGTGCCAATATTACTAACATCCGTGCCATATTTGATTTTCTGATCGAAATGCAGGATAAGGCGTCGTATTGCG
TCATGGCTGAGCACCGTAGAGCAGAGTACGCCAAGGCGATGGAAGCGTACAATAACCCAGGGGAACCCGGCCAGCATGAG
GTGGCCCACAAGGTGGAGCCGGCTGATGTGATGTACAACCAAGGGGAAGTCGGCCAGCGTGAGGTGGTGGAGCATGACGC
GCTGGCGCCATCGACGACCACGAGGTCGAGCCTGCGGATGAGATGTCGAATGGTGCCAACCTCAAGCCATGGAACACTGG
CGATGACCTAGCACAAGTTGAGTCGTTGGTCATCTCCATCACCGTCAGTGGCCAAAAGATGTCGTCAAGTCGCCTTCGCT
CTCTCGGTTTCCCTGCTTGCCTGCAGCCCAGCAAGCATGCCCAGCAAGCATGGGGGCATGGGGCAATGTTGAGCAGTCTC
ATGATCTTAGGCTTTGCTTTATGTGCTGGTTTGTATCTCTCCTGGCGCTAGATATTTTCTCATAGTGGATCCTTATGCTA
AGGTTCTTTTGCTCGTTGATGTTTACAGTAGAAATAGATTTAGTACGTAGGAACATTTTTTGTGTTGCTCTAGCCAGTGA
AACTGAGGGACTGGTGTTCCTTTAGACGAGGAACATTTTTTGTGTTGCTCTAGCCAGTGAAACTGAGGGACTGGTGTTCC
TTTAGACGATGATCACTACCAGAAAAACTTGTGATGCCGACGGCCGAACCTATGCCGACGACCCCCGTCGGCATAGATGG
GCATATCCCGACGGCCCAGCTAAAGCCGTCGGCGTA-----------------TATCAATCTATGCCGACGGCGCCAGTC
GGCATAGATCAGCCGTCGGCGTCGCAAGAAATATGCCTACGGCGGCCATCGGCATAGGGCATGCCGTCGTCATATCACGT
GGGCCCGCCTACCCGGGCGA-CGACGACCGTTTGATGACGTCAGGCTACGCCGACGGGCTAACGGT--------------
---------------GGCCGTCGGCATAGCTATGCCGACGTCATCGATCCGCGGCGCCCGCCACATCATCGATCCGCGTC
GCTCGCCGGTCCTGTGGAGTGGTAT-----------------GGCCGTTGGCATAGGCCTGGCCCATGGATCTTGCCACG
TCATCGATCCCTGCCCTACGCCACGTCATCGATCC-------------------------AGGGCTCTACCGTTTCATGG
CCGTAGCTA---------------CGTCGGCATAGATTT-TACTAATATTTTAATA-TTTTATTTATTTTCTCTTTTTA-
TTTTT----------TA--TTTT-TTTCCAAAAC-AATTTCATTAACTTAAATGTGCCTTAAATGTACAGAAAACATATA
TCGATTGCCCCC
>chr3A_2572
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-----------ATCACTACCAGAAAAACTTGTTTTGCCGACGGCCATATCTATGCCGACGGCCCCCGTCGGCATATATGG
GCATACACCGACGGCCCAATAAAAGCCGTCGGCGTAGAAAGGCCGTCGGTGTATAACCATCTATGCCGACGGGGGCCGTC
GGCATAGATAAGCCGTCGGCGTTTCTCCGAATATACCAACGGGGGCCGTCGGCATAGAGCAGGCCGTCGGCATATCGCGT
GGGCCCGTCTACCCGGGCGG-CGACGGCAGTTTGACGGCGTCAGGCTACGCCGACGGGCTAACGGT--------------
---------------GGCCGTCGGCATAGCTACGCCGACGTCATCGATCCGCCGCGCC-GCCACGTCATCGATCCACGTC
GTTCGCCGGTCCCGTGGGGTGGCATTTCTATAGGCC------------------------GGCCCATGGTTTTTGCCACG
TCATTGATCCCCGCCCTACGCCACGTCATCGATCC-------------------------AGGGCTCTACCGTTCCGTGG
CCGTAGCTATGCCGACGGATTTGCCGTAGGCATAGATTTCTAATAATTTTTTTATA-TTTTTTGTATTTTCTCTTATTA-
TTTTT----------TA--TTTT-TTTCCAATACTAATTTCATTAACTTAAATGT-------------------------
------------
>chr2D_2573
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------------TCACTACCAGAAAAACTTGGGTTGCCGACGGCCAAATCTATGCCGACGGCCCCCGTCGGCATAGATGG
GCTTACCCCGACGGCCCAGCCAAAGCCGTCGGCGTA-----------------TGTCCATCTATGCCGACGGGGGCCGTC
GGCATAGATCATCCGTCGACATTGCTTCAAATATACCTACGGTGGCCGTCGGCATAGAATAGGCCGTCGGCATATCACGT
GGGCCCGTCTACCCAGGCGG-CGACGGTAGTTTGACGGCGTCAGGCTACGCCGACGGGCTAACGGT--------------
---------------GGCCGTCGGCATAGCTATGCCGACGTCATCGATCCGCGGCGCC-GCCAGGTCATCGATCCGTGTC
GCTCGCCTGTCCCGTGGGGTGGCATTTCTATGCCGACGGCCTTACCGTCGGCATAGGCCTGACCCATGGATTTTGCCATG
TCATCGATCCCCACCCTACGCCACGTCATCGATCC-------------------------A-----------------GG
CCGTAGCTATGCCGACGGCTTTGCCGTAGGCATAGATTTCTAATAATATTTTAATATTTTTATTTATTTTCTCTTTTTA-
TTTTT----------TA--TTTT-TTTCCAAAACTAATTTCATTAACTTAAATGT-------------------------
------------
>chr3B_2573
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------------TCACTACCAGAAAAACTTGCGTTGCCGACGACCACATCTATGTCGACGGCTCCCGTCGGCATAGATGG
GCATACCCCGACGGCCCAGCTAAAGCCGCCGGCGTA-----------------TGTCCATCTATGCCGACGGGGGCCGTC
AGCGTAGATCAGGCGTCGACGTTGCTTCAAATATGCCTACGGCGACCGTCGGCACAGGGTAGGCCGTCGGCATATCACGT
GCGCCCGTCTACCCGGGCGG-CAACGGCCGTTTGACGGCGTCAGGCTACGCCGACGGGCTAACGGT--------------
---------------GGTCGTCGGCATAGCTATGTCAACGTCATCGATCCTCGGCGCC-GCCACATCATCGATCCGTGTC
GCTCGCTGGTCCCGTGGGGTGGCATATCTATGCTGACAGCCTTACCGTAGGCATAGGCCTGACCCATGGATTTTGACACG
TCATTGATCCCCGCCCTACGCCACGTCATCGATCC-------------------------AAGGCTCTACTGTTC-ATGG
CTGTAGCTATGCCGACGGCTTTGCCGTAGGCATAGACTTCTAATAATATTTTAATA-TTTTGTTTATTTTCTCTTTTTA-
TTTTTAT-T-----TTT--ATTT-TTTCCAAAACTAATTTCATTAACTTAAATGT-------------------------
------------
>chr3D_2574
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-------------CACTAGCAGAAAAACTTGCGATGCCGACGGCCAAACCTATACCGACGGCCCCCGTCGGCATAGATGG
ACATATCCTGATGGCCCAGCTAAAGCCGTCGGCGTAGAAAGGCCGTCGGCGTATATCCATCTATGCCGACAGCACCCGTC
GGCATAGATCAGCCGTCGGCGTCGCCATCAATATGCCTACGGTGGCCGTCGGCATAGGGTAGGCCGTCGGCATATCACGT
GGGACCGTCTACCCGGGCGG-TGACGGCCGTTTGACGACATCAGGCTACGCCGACGGGCTAACGGT--------------
---------------GGCCGTCGGCATATCTATGCCGACGTCGTCGATCCGCGGCTCCCGCTACGTCATCGATCCGCGTC
GCTCGCCGGTCCCGTGGGGTGGCATATCTATGCCGACGGCCTAGCCGTCGGCATATGCCTGGCCCATGGATCTTGCGACG
TCATCGATCCCTGACCTACGCCATGTCATCGATCC-------------------------AGGGCTGTACCGTTCCGTGG
CCGTAGCTATGCCGACGGCTTTGCCATAGGCATAGATTTCTAATAATATTTTAATA-TTTTATTTATTTTCTCTTTTTA-
T-----T-T-----TTT--ATTT-TTTCCAAAACTAATTTCATTAACTTAAATGTGCCTTAAATGTACAGAAAACATATA
TCGATTGCCCCC
>chr5D_2574
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-------------CACTACCAGAAAAACTTGCGTTGCCGACGGCCAAATCTATGCCGACGGCCCCCATCGGCATAGATGG
GCATACCCCGACGGCCCAGCTAAAGCCGTCGGTGTA-----------------TGTCCATCTATGCCGACGGGGTCCGTC
GGCATAGATCAGCCGCCGGCGTTGCTTCAAATATGCCTACGGCGGCCGTCGGCATAGGGTAGGCCGTCGGCATATCACGT
GGGCCCGTCTACCTGGGCGG-CGACGACCGTTTGACGGCGTCAGGCTACGCCGACGGCCTAACGGT--------------
---------------GGCCGTCGGCATAGCTATGCCGACGTCATCGATCCGCGCCGCC-GCCACGTCATCGATCCGCGTC
GCTCGCCGGTCCCGTGGGGTGGCATATCTATGCCGACGGCCA---------------CCTGGCCCATGGATTTTGCCACG
TCATCGATCCCCGCCCTACGCCACATCATCGATCC-------------------------AAGGCTCTACCGTTCCGTGG
CCCTAGCTGTGCCGACGGCTTTGCCGTAGGCATATATTTCCAATAATATTTTAATA-TTTTATTTATTTTCTCTTTTTG-
T-----T-T-----TTTATTTTT-TTTCCAAAACTAATTTCATTAACTTAAA----------------------------
------------
>chr2A_2574
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-------------CACTACCAGAAAAACTTGCGATGCCGACGGCCAAACCTATGCCGACAAGGGCCGTCGGCATAGATGG
GCATATCCCGACGACCCAGCTAAAGCCGTCGGCGTAGAAAGGCCGTCGGTATATATCAATCTATGCCGATGGCACCCGTC
GGCATAGATCAGCCGTCGGCGTCGCAAGAAATATGCCTACGACGGTCGTCGGCATAGGGCAGGCTGTCGGC---------
---CCCGTCTACCCGGGCGGACGACGGCCGTATGACGGTGTCAGGCTACGCCGACGGGCTAACGGT--------------
---------------GGCCGTCGGCATAGCTATGCCAACGTCATCAATCTGCGGCGCCCACCACGTCGTCGATCCGCGTC
GCTCGCCGGTCCCGTGGGGTGGCATATCTATGCCGACGGCCTAGCCGTTGGCATTGGCTTGGCCCATGGATCTTGCCACG
TCATCAATCCCCGCCCTACGCCACGTCATCGATCC-------------------------AGGGCTCTACCGTTCCATGG
CCGTAGCTA------------AGCCGTCGGCATAGATTTCTAATAATATTTTAATG-TTTTATTTATTTTCTCTTTTTA-
T-----T-T-----TTT--ATTT-TTTCCAAAACTAATTTCATTAACTTAAATGTGCCTTAAATGTACAGAAAAAATA--
------------
>chr6D_2574
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-------------CACTACCAGAAAAACTTGCGATGCCGACGGCCAAATCTATGCCGACGGCCCCCGTCAGCATAGATGG
ACATATCCCGACGGCCCAGCTAAAGCCGTCGGCGTAGAAAGGCCGTCGGCATATATCAATCTATGCCGACGGCACCCGTC
GGCATAGATCAGCCGTCGGCGTCGCAAGAAATATGCCTACGGCAGCCGGCGGTATAGCGCAGGCCGTCGGCATATCATGT
GGG-CCGTCTACCCGGGCGG-CGACGGCCGTTTGACGGCGTCAGGCTACGCCGACGGGCTAACAGT--------------
---------------GGCCGTCGGCATAGCTATGCCGAAAG-------------------------CATCGATCTGCGTC
GCTCGCCGGTCCCGTGGGGTGCCATATCTATGCCGACGGCCTTGCCGTCGGCATAGGCCTGGCCCATGGATCTTGCCACG
TCATTGATCCCCGCCCTACGCCACGTCATCGATCC-------------------------AGGGCTCTACTGTTCCGTGG
CCATAGCTATGCCGACGGCTTTGCCGTAGGCATAGATTTCTAATAATATTTTAATA-TTTTATTTATTTTCTCTTTTTA-
T-----T-T-----TTA--TTTT-TTTCCAAAACTAATTTCATTAACTTAAATGTGCCTTAAATGTACAGAAAACATATA
TCGATTGCCCCC
>chr2D_2574
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-------------CACTACCAAAAAAACTTGTGATGACGACGGCCAAACCTATGCCGACGACCCCCGTCGGCATAGATGG
GCATATCCCGACGGCCCACCTAAAGTCGTCGGCGTAGAAAGGCCGT-GGCGTATATCCATCTATGCCGACGGCACCCGTC
GGCATAGATCAGCCGTCGGCGTCACAATAAATATGTCTACGGTGGTCATCGGCATACGGGAGGTCGTCGGCATATCACGT
GGGCCCGGCTACCCGGGCAG-CGACGGCCGTTTGACTGCGTCAGGCTACGCCGACGGGCTAACGGT--------------
---------------TGCCGTCGGCATAGCAATGCCGACGTCATCGATCTGCGTCGCCCGCCACATCATCGATCCGCGTC
GCCCGCTGGTCCCGTGGGGTGGCATATCTATGCCGACGCCCT------------------GGCCCAGGGATCT-------
------------------TGCCACGCCATCGATCC-------------------------AGGGCTCTACCGTTCCGTGG
CCGTAGCTATGCCAACGGCTTTGCCGTAGGCATAGATTTCTAATAACATTTTAAT---TTTATTTATTTTCACTTTTTT-
C-----T-T-----TTT--ATTT-ATTTACAAAACTATTTCATTAACTTAAATCTGCCTTAAATGTACAGAAAACATATA
TCGATTGCCCCC
>chr2D_2574
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-------------CACTACCAGAAAAACTTGCAATGACGACGGCCAAACCTATGCCGACGACCCCCCTCGGCATAGATGG
GCGTATCCCGACGGCCCACCTAAAGTCGTCGGCGTAGAAAGGCCGTCGGCGTATATCCATCTATGCCGACGGCACCCGTC
GGCATAGATCAGCCGTCGGCGTCACAATAAATATGTCTACGGTGGCCATCAGCATAGGGGAGGTCGTCGGCATATCACGT
GGGCCCGGCGACCCGGGCGG-CGACGGCCGTTTGACTGCGTCAGGCTACGCCGACGGGCTAACAGT--------------
---------------TGCCATCGGCATAGCAATGCCGACGTCATCGATCTGCGCCGCCCGCCACGTCATCGAT-------
--CCGCTGGTCCCGTGGGGTGGCATATCTATGCCGACGCCCT------------------GGCCCAGGGATCT-------
------------------TGCCACGCCATCGATCC-------------------------AGGGCTCTACCGTTCCGTGG
CCGTAGCTATGCCGACGGCTTTGCCATAGGCATAGATTTCTAATAACATTTTAATA-TTTTATTCATTTTCACTTTTTT-
ATTTTTTAT-------------TTATTTACAAAACTATTTCATTAACTT-AATGTGCCTTAAATGTACAGAAAACATATA
TCGATTGCCCCC
>chr6A_2574
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-------------CACTACCAGAAAAACTTGTTTTGCCGACAGCCATATATATGCCGACGGCCCCCGTCGGCATATATGG
GCATACCCCGACGGCCCAACTAAAGCCGTCGGCGTATAA-----------------CCATCTATGCCGACGGGGGCCGTC
GGCATAGATAAGCCGTCGGCGTTTCTCCGAATATACCGACGGGGGCCGTCGGCATAGAGCAGGCCGTCGGCATATCGCGT
GGGCCCGTCTACCCGGGCGG-CGACGACTGTTTGACAGCGTCAGGCTACGCCGACGGGCTAACGAT--------------
---------------GGCCGTCGGCATAGCTATGCCGACGTCATCGATCCGCCGCGCC-GCCACGTCATCGATCCGCGTC
GTTCGCCGGTCCCGTGGGGTGGCATTTCTATGCCGACGGCTAGGCCGTCGGCACAGGCCTGGCCCATGGTTTTTGCCACG
TCATTGATCCCCGCCCTATGCCACGTCATCGATCC-------------------------AGGGCTCTACCGTTCCGTGG
TCGTAGCTATGCCGACGGCTTTGCCGTAGGCATAGATTTCTAATAATATTTTTATA-TTTTTTGTATTTTCTCTTATTAT
T-----T-T-----TTA--TTTT-TTTCCAATACTAATTTCATTAACTTAAATGT-------------------------
------------
>chr5A_2574
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-------------CACTACCAGAAAAACTTGTTTTGCCGATGGTCGTATCTATGCCGACGGCCCCCGTCGGCATATATGG
GCATACCCCGACGACCCAACTAAAGCCGTCGGCGTATAG-----------------CCATCTATGCCGACGGGGGCCGTC
GGCATAGATAAGCCGTCGGCGTTTCTCCGAATATACCGACGGGGGCCGTCGGCATAGAGCAGGCCGTCGGCATATCGCGT
GGGCCCGTCTACCCAGGCGG-CGACGGCAGTTTGACGGCGTCAGGCTACGCCGACGGGCTAACGGT--------------
---------------GGTCGTCGGCATAGCTATGCCGACGTCATCGATCCGCCGCGCC-GCCACGTCATCGATTCGCGTC
ATTCGTCGGTCCCGTGGGGTGGCATTTCTATGCCGACGGCTAGGCCGTCGGCATAGGCCTGGCCCATGGTTTT-------
------------------TGCCACGTCATCGATCC-------------------------AGGGCTCTACCGTTCCGTGG
CCGTAGCTATGCCGACGGCTTTGCCGTAGGCATAGATTTCTAATAATATTTT---------TTGTATTTTCTCTTATTAT
T-----T-T-----TTA--TTTT-TTTCCAATACTAATTTCATTAACTTAAATA-----------TACAGAAAACATATA
TCGATTGCCCCC
>chr2B_2574
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-------------CACTACCAGAAAAACTTGCGTTGCCGACGGCCAAATCTATACCGACGGCCCCCGTCGGCATACACGG
GCATACCACGACGGCCCAGCTAAAGCCGTCGGCGTATGT-----------------CCATCTATACCGACGGGGGCCGTC
GGCATAGATCAGCCGTCGGCGTTGGTTCGAATATGCCTACGGTGGCCGTCGGCACATGGTAGGCCGTCGGCATATCATGT
GGGCCCGTCTACCCGGGCGG-CG-------TTTGACGGTGTCAGCCTACGCCGAGGGGCTAACGTT--------------
---------------GGCCATCGGCATAGCTATGCCGACGTCATCGATCCTCGGCGCC-GCCACGTCATCGATCCGCGTC
GCTCGCCGGTCCCGTGGAGTGGCATATCTATGCCTACGGCCTTACCATCCGCATAGGCCGGGCCCATGGATTT-------
------------------TGCCACGTCATCGATCCCCACTCTACACCACGTCATCGATCCAAGGCTCTACCATTCCGTGG
CCGTAGCTATGCCGACGGCTTTGCCATAGGTATAGATTTCTAATAATATTTTAATA-TTTTATTTATTTTATTTTTTTA-
T-----T-TTTATTTTT--ATTT-TTTCCAAAACTAATTTAATTAA-----------CTTAAATGTACAGAAAACATATA
TCGATTGCCCCC
>chr7D_2595
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----------------------------------TGCCGACGGCCAAATCTATGCCGACGGCCCCCGTCGGCATAGATGG
ATGTATCCCGACGGCCCAGGTCAGGCCGTTGGCGTAGAAAAGCCGTCAGCATACACAAACCTATGCCGACGGGGGCCGTC
GGCAT-----------------CCAAGTCAATATGCCTACGGCGGCCGTCGGCATAGAGGCGGCCGTCGGCGTACCTA-T
GGGCCCGGCTACCCGGGCGG-CGACATCCTTT----GACGGCACGAAGCG----GGGCCTAACGGTGGCCGTCTGCATAG
CTATGCCGACAGCAAGGCCGTCGGCATAGCTATGCCGGCGTCATCGATCCGCGTGATCCGCCACATCAACGATCCGAAAC
GATCACCGGT-CCGTGGGGTGGCATATCTATGCCGACGGCC--------GGCATAGGTCTGGCCCATGGACGG-------
------------------TGCCACGTCATCGATCCGCGCCATACGCCACGTCATCGATCCAGGGCTCTACCCTTCCGTGG
CTGTGGCTATGCCGACGG------------CATAGATTTCTAATATTTTTTTCATA-TTTTATTTATTTTCTCTTTTTT-
CCTTTTTAT-------------T-TTTTCCAAAATAATTAGATTAACTTAAATGTGCCTT--ATGTACAGAAAACATATC
TCGATT------
>chr3D_2612
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---------------------------------------------------ATGCCGACGGCCCCCGTTGGCATAGATGG
GCATATCCCGACGGCCCAGCTAAAGCCGTCAGCATAGCAAGGCCGTCGGCGTATGTCAATCTATACCGACGGCACCCGTC
GGCATAGATCAGCCGTCGGCCTTGCAAGAAATATGCCTACGGCA------------------GCCGTCGGCATATCACGT
GGGCCCGTCTACCCGGGCGG-CGATGGCCGTTTGACGGCGTCAGGCTACGCCGACGGGCTAACTGT--------------
---------------GGCCGTAGGCATAGCTATGCCGACGTCATCGATCCACGGCGCCTGCCACGTCATCGATCCGCGTC
GCTCGTCGGTCCCGTGGGGTGGCATATCTATGCCG------------TCGGCATAGGCCTGGCCCATGGATCT-------
------------------TCCCACGTCATCGATCCCCGCCCTACGCCACGTCATCGATTCAGGGCTCTACCGTTCCGTGG
CCGAAGCTATGCCCACGGCTTTGCCGTAGGCATAGTTTTCCAATAATATTTTAATA-TTTTATTTATTTTCTCTTTTTA-
T-----T-T-----TAT--ATTT-TTTCCAAAACTAATTTCATTAACTTAAATGTGCCTTAAATGTACAGAAAACATATA
TCGATTGCCCCC
>chr7D_2612
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---------------------------------------------------ATGCCGACGGCCCCCGTCGGCATAGATGG
ACATATCCCGATGGCCCAGCTAAAGCCGTCGGCGTAGAAAGGCCGTCGGCGTATTTCCATCTATGCCGATGGCACCCGTC
GGCATAGATCAGCCGTCGGCGTCTCCATCAATATGCCTACGGTGGCCGTCGGCATAGCGTAGGCCGTCGGCATATCACGT
GGGCCCGTCTACCCGGGCGG-TGACGGCCGTTTGACGACGTCAGGCTACGCCGACGGGCTAACGGT--------------
---------------GGCCGTCGGCATATCTATGCCGACGTCATCGATCCGCGTCGC-----------------------
--TCGCCGGTCCCGTGGGGTGGCATATCTATGCCGACGGCCTAGCCGTCGGCATAGGCCTGGCCCATGGATCT-------
------------------TGCCACGTCATCGATCCCCGACCTACGCCACGTCATCGATCCAGGGTTGTACCGTTCCGTGA
CCGTAGCTATGCCGACGGCTTTGCCGTAGGCATAGATTTCTAATAATATTTTAATA-TTTTATTTATTTTCTCTTTTTA-
T-----T-T-----TTT--ATTT-TTTCCAAAACTAATTTCATTAACTTAAATGTGCCTTAAATGTACAGAAAACATATA
TCGATTGCCCCC
>chr5A_2662
AAAGGCT-------------------------------------------------------------------------
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--------------------------------------------GTCGACGTATATCCATCTATGCCGACGGCCCCTGTC
GGCATAGATCAGTTGTTGGCGTCGCGAGAAATATTCCTACGGCGGCTGGCGGCATAGGTTAGGCCGTCGGCATATCACGT
GGGCCCGGCTACCCGGGCAG-CGACGACCGTTTGACGGCGTCAGGCTACGCCGATAGGCTAACGAT--------------
---------------GGCCGTCGGCATAGCTATGCCGACGTCATCGACCCGCAGCGCCCGCCACATCATCGATCTGCGTC
GCTCACCGGTCCCGTGGGGTGGCATATCTATGTCGACGGCCTCGCCGTCGGCATAGGCCTGGCCCATGGAACT-------
------------------TGCCACATCATCGATCCCCGCCCTATGCCATGTCATCGATCCAGGGCTCTACCGTTCCGTGG
CCGTACCTATGCCGAC----------------TAGATTTCTAATAATATTTTAATA-TTTTATTTATTTTCTCTTTTTA-
T-----T-T-------------T-TTTCCAAAACTAATTCCATTAACTTAAATGTGCCTTAAATGTACAGAAAACATATA
TCGATTGCCC--
>chr1B_2662
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---------------------AAAGCCATCGGCATA-----------------CACAAATCTATGCCGACGGGGGCCGTC
GGCACAGATCAGCCGTCGGCATCCAAGTCAATATGCCTACGGCGGCCGGCGGCATAGAGGCGGTCGTCGGCGTATCTA-T
GGGCCCAGCTACCCGGGCGG-CGACATCCTTT----GACGTCACGAAGCG----GGGCCTAACAGTGGCCGTCTGCATAG
CTATGCTGACAGCAAGGCCGTCGGCATAGCTATGCCGACGTCATCGATCCGCGTGATCCACCACGTCAACGATCTGAAAC
GATCACCGGT-CCGTGGGGTGGCATATCTATGCCG------------TCGGCATAGGTCTGGCCCATGGACAG-------
------------------TGCCACGTCATCGATCCGCGCCATACGCCACGTCATTGATCCAGGGCTCTACCCTTCCGTGG
CTGCGGCTATGCCGACGGAATAGCCGTAGGCATATATTTCTAATT-TTTTTTTATA-TTTTATTTATTTTCTCTTTTTT-
CCTTTTTAT-------------T-TTTTCCAAAATAATTAGATTAACTTAAATGTGCCTT--ATGTACAGAAAACAT---
------------
>SNPs
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---------------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------------------------------------------------------S-------S----------
-------S-----------S---------------S--------------------------------------------
--------------------------------------------------------------------------------
------------S---------S---------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------------------------------S-------------------------------------
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------------
>forward_546
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----------------------------------------------AGCAGTCAAACGACGGACAT--------------
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>reverse_1460
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-------------------CGAACGTCAAGGTGTCCTCA-----------------------------------------
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>forward_582
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--TGTGCCCCTTGTGTCTGATC----------------------------------------------------------
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>reverse_1830
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---------------------------------------------------------------------GGGGCGAATCT
ACCAGGATG-----------------------------------------------------------------------
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>forward_1479
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-------------------CGAACGTCAAGGTGTCCTCA-----------------------------------------
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>reverse_2482
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-ACTGAGGGACTGGTGTTCCT-----------------------------------------------------------
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------------
