>input_sequence_58526
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-----------------------------------------AAATTAAACTGCCTGTCAAAAATAAGGGAAGACATTAAA
CTGAGTCGGGCCCACCCACCAAAGACCGTTG-------------------------------------------------
--------------------------------------------------------------------------------
----------AAAAAAAAAAAACCAGCTAGGTGCCTCTTGGCTGTGACGAGAGAGACTGAGAGCGACCGAGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATTTACCCTCCTCCCACGC--ACGACCATACGACGATACGACGACACGGTCCAGTCTTCGGACGCAT
GCCGATGCCGACGCAGACGTCCATGGATGCCGCCAGGACGGTCGTGGTGACCGCCTACCAGGAGCTGCCGCGCCGCCGTT
CCGGCAGCCACGGCGCGTCCTCGT------------CCAGGACGCGCTCGGCCTCGGGGGGCTACAACAACCGCCGGGCG
ATGCTGCTCGCGTACGCGCAGCACCTGCGGCGGCGCGGCGGGCAGAGGTCGTCGTGTTC------------GGGGCCGCC
GCGCGTGCTGGAGTGGGGCGAGTGGAAGCGGGCGGACGATCCCGGCGCCGGCGCCGGCAACGACGACAAGGTA-------
CGGATCGGCAAAACATTTCTTATTTCGTTGGATCATGCA----CGGCGTGCATCTAAT---TAACGCGTGC---------
---TCGATCAGCAGGTGGTGGCGGGGCGGAGGAGGGGTTGCTGCGCCAGGCTCCGGCTGTGGGCACGGATTTGGATCAGG
ACGTTTTTCCGGCGCGTCAGGAGGATCAGGGAGAACGCCTCGTGCAGGAAAGCGGACTGAACGGGTTGGTCATGTACGGC
AATTCGACGATACGAGGAGGATGAGTTGGTTGTTCATCGGCGAATTAGCGCCTGC--ATGCATCTGCATGTGTCCCGGAA
TA-------------------GAACTCGTACGTGCATCTCCACGTGAACAACATGTGCACTTGACATA------------
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--------------------------------------
>chr4B_1_TraesCS4B01G041700
TTTTCACCTGGAAATTAGCACAATCCAATCACCATTATCGTATCTCTTTCTTCCTCCACAAGAAAAGCTTAGACCGTCCG
ATCTATATCTGACGGATAGAAAACATTGCAATTTTGTAAAAAGATATCCGCACTTCTCTCCACATTTGTAGATAAGGACT
TTCCTCGTTCACCCTTATTTCCCACAACCTCATTGTTGAGCAATTAAAAAGGAAGTCTCTGGAACAATCTGGCATGGTGG
CCGCTGTCGACGTCGTCCATCCCCATGCCTCCGCTCAGTCCGACCACCAATCATCACCACACCACACTCCTCCTCACCTT
ATCTCTCCTCTTTCTCGAGATATCATTAATTTCTACGCATGGGATTACTCCCGCATGGGTCAATCACAACAGGTGTTTTA
TAACAAAATGTGTCCTGATGTTCTGTGCAATGCACGGGCATCTTGCTAGTTGGGTTCAATGTCTTAATAGAAATAATATC
TCTCACGTTCTATCCTCGTCCCGATGGTGCGTCTAGCATCGTCGGAGGGCGTGTGGAGGTGTGTTCTATCGAATCTCGCG
GGATTCGATCGGTGCTGGTCTCCGGTGGATTTGTTTGCATCCGGTCTTCGTTCGTCTTCGTTTGGGTGTTTACACGTTTG
ATCCTTCTGATTTACGGCTTTCTTCATCGGCGGTGGTTGTTACTCTGGTGCGCTGGTCCTATGGGACCTTAGCATGACGA
CTTCCCGACTGTCTACTACTAAGGGTTGCTCGGCTTCGGTAAGGGAGGGGCGATAACGGCCGCACGCCTTTGGCTCACTT
CAGTGATTGCAGTTGTCACTAGGTGGTGCACGGACATAGTTGTAATTTTTATTATCTCTGTTGTTATTTGTACTGCCATG
AGAGTCTAGAGAGGCAAGATTTGATGAGCAAGTCTAGCAGGCAGCAGCCGGTATTTTGTGATGGCTGACTTTGGGTAGTA
GTTATGGCTGTCCTTTCTGCTTA-GATGTTAGACAAGGAAGAAATTAAACTGCCTGTCAAAAATAAGGGAAGACATTAAA
CTGAGTCGGGCCCACCCACCAAAGACCGTTG-------------------------------------------------
--------------------------------------------------------------------------------
----------AAAAAAAAAAAACCAGCTAGGTGCCTCTTGGCTGTGACGAGAGAGACTGAGAGCGACCGAGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATTTACCCTCCTCCCACGC--ACGACCATACGACGATACGACGACACGGTCCAGTCTTCGGACGCAT
GCCGATGCCGACGCAGACGTCCATGGATGCCGCCAGGACGGTCGTGGTGACCGCCTACCAGGAGCTGCCGCGCCGCCGTT
CCGGCAGCCACGGCGCGTCCTCGT------------CCAGGACGCGCTCGGCCTCGGGGGGCTACAACAACCGCCGGGCG
ATGCTGCTCGCGTACGCGCAGCACCTGCGGCGGCGCGGCGGGCAGAGGTCGTCGTGTTC------------GGGGCCGCC
GCGCGTGCTGGAGTGGGGCGAGTGGAAGCGGGCGGACGATCCCGGCGCCGGCGCCGGCAACGACGACAAGGTA-------
CGGATCGGCAAAACATTTCTTATTTCGTTGGATCATGCA----CGGCGTGCATCTAAT---TAACGCGTGC---------
---TCGATCAGCAGGTGGTGGCGGGGCGGAGGAGGGGTTGCTGCGCCAGGCTCCGGCTGTGGGCACGGATTTGGATCAGG
ACGTTTTTCCGGCGCGTCAGGAGGATCAGGGAGAACGCCTCGTGCAGGAAAGCGGACTGAACGGGTTGGTCATGTACGGC
AATTCGACGATACGAGGAGGATGAGTTGGTTGTTCATCGGCGAATTAGCGCCTGC--ATGCATCTGCATGTGTCCCGGAA
TA-------------------GAACTCGTACGTGCATCTCCACGTGAACAACATGTGCACTTGACATAACAAAAAGGCAG
ATTGGTAGGGTAGGCCAGTGTTTGCGTAACA----TTCTAAAATTTAGACATGAGTTTTTTTTTACGAGGAAACTTCCAA
TCTATTCATCTTCAATCATGGCAGTACAACGAACATCAGAAATAATAAAAATTACACCCAGATCCGTAGACCACCTATCG
ACGACTACAAGCACTGAAGCGAGCCGAAGGCGCGCCGCCATCATCGCCCCTTCCTCATCGGAGTCGGACACAACTTGTTG
TAGTAGACAGTCGGAAAGTCGTCGTGCTAAGGCCCCATAGAACCATCGCACCAGAACAGCAACCGTCGCTGATGAAGAAT
AACGTAGATCGAAAAAATCCAACCTGAAGACACACGAACATAGACGAACAATAACCGGATCCGAGTAAATCCACCGAGGA
TAGATCCGCCGGAGACACACCTCCACACGCCCACCAACGATGCTAAACGCACCACCGGAACGGGGGCTAGGCGGGGAGAC
ATTTATTCCATATTCAGGGAGACGCCGCCGTCTCGTCTTCCTGAGCAGGACACAAACCCTAACAA--CTCGAAGGAACGA
CTAACAACGAAGCCCTACCGCCGGCCCTTGCCCAGATCCACCGCGCCCCCATGGCCCTAAGGCCACGGGAGACGAGACGG
ACCTGCGGCGGCGCCGGCGAGAGGCACCAACCCTAGCTTTGTTTTGGATGAG--GAGGAGGCGGCGGCTGACGTAACACG
CGTTAAAATTTAGACATGAGTTGAAGGTGCTTGCTCATGAATTTCTATGGTACTTCTGTCTCTCTTGAAAGAGCCGTACA
C--GGATCTGGAAGACTCCTGAGCTAGGACCTTCCAAATTAAGAAGGATAGAGACGTCTCATCTCCAGTGCTCCGCCGGC
AAGGTCAGTGGATCTCCATTGTCTCTGGTGGCTGCGGAGTGACCACGGGGACCATTGATCTTGATGTTGGATGCGAGGTT
GGTTTTGGTGGTGTAGCAACCGTCGCGGACAATAGGCT
>chr4A_877
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----------------------------------------------------------------------------CATG
GGAGACTAGAGAGACAAGATTTGATGAGCAAGTCTAGCAGGCAGCAGCCGGTATTTTGTGATGTCTGACTTTGGCTAGTA
GTTATGGCTGTCCTTTTTGATTAAGATGTTAGACAAGGAAGGAATTAAACTGCCTGTCAAAAATAAGGGAAGAAATTAAA
CTGAGTAGGGCCCACATACCAAAGACCGTTGACGAGATACTATATAGACCACGTTTTCTTGTACAGTACTAGTCCATGCA
CCCCATGAAACAGTGGTCAATGCATCCCATAAAACCTCGCCTTGCATGTCCCTGTCAATATTACCCATCCAGCCTACGTT
AATTTTTTTAAAAAAAAAAAACCCAGCTAGCTGCCTCTTGGCTGTGACGAGAGGAACTGAGAGCGACCGAGCCGAACTGC
TCCGGCAAGTGTGGCCTCGCCGCGCCGGCCACCAATCTCAGCCACAAACTGCGTGCCTGCGGCCTCTCGCGTGATCGCCC
CCCTAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ATTTACCCTCCTCGCGCGCGCACGACCGTACG---------CGACACGGCCCAGTCTTCGGACGTAC
GCCGATGCCGACGCAGACGTCCATGGATGCCGCCAGGACGGTCGTCGTGACCGCCTACGAGGAGCTGCCGCGCCGCCGTT
CCGGCAGCTACAGCGCGTCCTGGTCGACCGCTCGAGCCGGGGCGCGCGCGGCCGCAGGCGGCT---CCAACCGCCGGGCG
ATGCTGCTCGCGTACGCGCAGCACCTGCGGCGGCGCGGCGGGCAGAGGTCGTCGTCGTCGTT---GTCCTTGGGGCCGCC
GCGCGTGCTGGAGTGGGGCGAATGGAAGCGGGCGGACGATCGCGGCGCCGGCGCCCGCGACGACGACAAGGTGAGCGCGG
CGGATCGGCAAGACATTTCTTATTTCGTTGGATCATGCATGCACGACGTGCATCTAAGATCTAACGCGTGCTGGTGTCTT
CGATCGGTCAGCAGGTGGTGGCGGGGCGGAGGAGGGGTTGCTGCTCCAGGCTCCGGCTGCGGGCGCGGCTTTGGATCAGG
ACGTTTTTCCGTCGCGTCAGGAGGATCAGGGAGAACGCGTCGTGCAAGAAAGCAGATTGAACGGGTTGCCCATGCACGAC
AGTTCGACGATACGAGGAGGATGAGTTGGTTCGTCATCGGCGAATTAGC----GC--CTGCATCTGCATGTGTCCCGGAA
TTTTCTGTCTGCTGCTGTGCTGAATTCGTACGTGCATCTCCACATGAACGACATGTATACTAC-CATAGCAAAAATGCAG
ATGGATAGGGTAGGCCAGTGCTTGGGTAGTAACATT--------------------------------------------
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--TTAAAATTTAGGCATGAGTTGAAGGTTCTTGCTCACAAATTGCTATGGTACTTCTGTCTCTCTTGAAAGAGGCGTACG
ATGGGATCTGGAAGACTCTCGGGTTAAGACCTTCCCGATTAAGAAGGTTAGGGACGTCTCATCTCCGGTGCTCCGCCGGC
AAGGCCAGTGGATCTCCATTGTCTCTGGTGGCTGCGGAGTGACGACGGGGACCATTGATCTTGGTGTTGGATGCAAGGTT
GGTTTTGGTAGT--------------------------
>chr4D_1474
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-------------ATTTACCCTCCCCCCACGC--ACGACCATACGCGACAGC---GACACGGTCCAGTCTTCGGACGCAT
GCCGATGCCGACGCGGACGTCCATGGATGCCGCCAGGACGGTCGTCGTGACCGCCTACCAGGAGCTGCCGCGCCGCCGTT
CCGGCAGCCACGGCTCGTCGTCGT------------CCAGGACGCGCTCGGTCGCGGGAGGCT---ACAACCGCCGGGCG
ATGCTGCTCGCGTACGCGCAGCACCTGCGGCGGCGCGGCGGGCAGAGGTCGTCGTCGTCGTCGTCGTCCTTGGGACCGCC
GCGCGCGCTGGAGTGGGGCGAATGGAAGCGGGCGGACGATC------CCGGCGCCGGCAACGACGACAAGGTA-------
CGGATCGGCACAACATTTCTTATTTCGTTGGATCATGCATGCACGACGTGCATCTAA-------CG----------TCCT
CGATCGACCAGCAGGTGGTGGCGGGGCGGAGGAGGGGCTGCTGCTCCAGGCTCCGGCTGTGGGCGCGGCTCTGGATCAGG
ACGTTTTTCCGTCGCGTCAGGAGGATCAGGGAGAACGCGTCGTGCAGGAAAGCAGATTGAACGGGTTGGTCATGCACGAC
AGTTCGACGATACGAGGAAGAATCA---GTTGGTCATCGGCGAATCAG-----GC--CTGCATCTGCATGTGTTCCGGAA
TTTTTCTGTGTG---TGTGCTGAACTCGTGCGTGCATCTCCACATGTACGACATGTA-----C-CATAACAAAAATGCAG
ATGGGTTGGGTAGGCC---GCTTGCGTAACA----TTCTAAAATTTAGACGTGAGTT-----------------------
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>chr4B_1508
TAC-----------------------------------------------------------------------------
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--------------------------------------------------GC---GACACGGTCCAGTCTTCGGACGTAT
GCCGATGCCGTCGCGGACGTCCATGGATGCCGCCAGGACGGTCGTGGTGACCGCCTACGAGGAGCTGCCACGCCGCCGTT
CCGGCAGCTATAGCGCGTCCTGGTCGACCGCTCGAGCCGGGACGCGCGCGGCCGCGGGCGGCC---ACAACCGCCGGGCG
ATGCTGCTCGCGTACGCGCAGCACCTGCGGCGGCGCGGCGGGCAGAGATCGTA---TTC------------GGGGCCGCC
GCGCGTGCTGGAGTGGGGCGAATGGAAGCGGGCAGACGATCCCGGCGCCGGCGCCGGCAACGACGATAAGGTGAGCGCGG
CGGATCAGCAAAACATTTCTTATTTCGTCGGATCATGCATGCACGACGTGCATCTAA-------CGCGTGCTCATGTCCT
CGGTCGACCAGCAGGCGGTGGCGGGGCGGAGGAGGGGCTGCTGCTCCAGGCTCCGGCTGTGGGTGCGGCTTTGGATCAGG
ACGTTCTTCCGTCGCGTCAGGAGGATCAGGGAGAACGCGTCGTGCAGGAAAGCAGATTGAACGTGTTGGTCATGCAGGAC
--------GATACGAGGAAGATCATTTGGTTGGTCATCGGCGAATTAGCGCCTGCATCTGCATCTGCATGTGTCCTGGAA
TTTTTCTGTGTG---TGT--TGAACTCGTAAGTGCATCTCCACATGAACGACATGTATACTAC-CATAACAAAAATGTAG
ATTGGTAGGGTAGGCCAGTGCTTGCGTAACA----T--------------------------------------------
--------------------------------------------------------------------------------
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--TTAAAATTTAGGCATGAGTTGAAGGTGCTTGCTCACGAATTTTTATGGCACTTCTGTCTCTCTTGAAAGAGCCGTACA
C--GGATCTGGAAGACTCCTGAGTTAGGACCTTCCAAATTAAGAAGGATAGAGACGTCTCATCTCCCGTGCTCCACCGTC
AAGGTCAGTGGATCTTCATTGTCTCTGCTGGCTGTGGAGTGACGATGGGGA-------------------ATGCGAGGTT
GGTTTTGGTGGTGTAGCAATGGCCGCGGGCAATAGGCT
>chr2B_2238
G-------------------------------------------------------------------------------
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-------------------------------------------------------TTGTTTTTTTCGAGAAAACTTTCAA
TCCATTCATCTTCCATCACGGCAGTACAACGAACACTAGAAATAATAAAAATTACATCCAGATCCGTAGACCACCTAGCG
ACGACTACAATCACTGAAACGAGCCGAAGGCGCGCCGCCGTCATCACCCCTCCCTCGCCGGAGTCGGGCACAACTTGTTG
TAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCCCGTAGGACCAGCGCACCAGAACAGCAACCGCCGCTGATGAAGAAT
AACGTAGATCGAAAGGATCCAACCTGAAGACACACGAACATAGACGAGCCACAACCAGATCCGAGCAAATCCACCGAGGA
TAGATCCGCCGGAGACACACCTCCACACGCCCACCAACGATGCTAGACGCACCACCGGAACGGGGACTAGGCGGGGAGAC
CTTTATTCCATCTTCAGGGAGCCGCCACCGTCTCGTCTTCCTGAGTAGGACACAAACCCTAACAAATTTTGAAGGAACAA
CTAACAACGGAGCCCTCCCGCCGGCCCTTGCCAGGATCCACCACGCCCCCATGGCCCTAGGGCCACCGGAGACGAGGCGG
ACCTGCGGCGAAGCCGGCGAGAGGCACGAACCCTAGCTTTTC-TTGGAGGAG--GAGGCGGCGGC---------------
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>chr3D_2239
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-------------------------------------------------------TTTTTTTTTGCGAGAATATTTCCAA
TCTATTCATCTTCAATCATGGCAGTACAACGAACACCAGAAATAATAAAAATTACACCCAGATCCGTAGACCACCTAGCG
ACGACTACAAGCACTGAAGCGAGCCGAAGGCGCGCCGCCGTCATCGCCCCTCCCTCGCCGGAGTTGGGCACAACTTGTTG
TAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCCCATAGGACCAGCGCACCAGAACAACAACCGCCGCCGATGAAGAAT
AACGTATATCGAAAGGATCCAACCTGAAGACAGACGAATATAGACGAACAATAACCGGATCCGAGCAAATCCACCTAGGA
TAGATCCGCCGGAGACACACCTCCACACGCCCACCAATGATGCTAGACGCACCACCGGAACGGGGGTTAGGCGGTGAGAC
CTTTATTCCATCTTCAGAGAGATGCTGCCGTCTCGTCTTCTTGAGCAGGACACAAACCCTAACAAAACTCGAAGGAACGA
CTAACAACGAAGCCCTCCCGCCAGCCCTTGCCCAGATCCACCGCGCCCCCATGGCCCTAAGGCCACGGGAGACGAGACGG
ACCTGCGGCGGCGCCAGCGAGAGGCACAAACCCTAGCTTTGTTTTGGATGAGAGGAGGAGGCGGCGGCTGAGGTAACAC-
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>chr4A_2239
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-------------------------------------------------------TTTTTTTTTGCGAGAAAACTTTCAA
TCTATTCATCTTCCATCACGGCAGTACAACGAACACTAGAAATAAT-AAAATTACATCCAGATCCGTAGACCACCTAGCG
ACGACTACAATCACTGAAACGAGCCGAAGGCGCGCCGCCGTCATCACCCCTCCCTCGCCGGAGTCGGGCACAACTTGTTG
TAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCCAGTAGGACCAACGCACCAGAACAGCAACCGCCGCTGATGAAGAAT
AACGTAGATCGAAAGGATCCAACCTGAAGACACACGAACATAGACGAACCACAACCAGATCCGAGCAAATCCACCGAGGA
TAGATCCGCCGGAGACACACCTCCACACGCCCACCAACGATGCTAGACGCACCGCCGGAACGGGGACTAGGCGGGGAGAC
CTTTATTCCATCTTCAGGGAGCCGCCACCGTCTCGTCTTCCTGAGTAGGACACAAACCCTAACAAATTTTGAAGGAACGA
CTAACAACGGAGCCCTCCCGCCGGCCCTTGCCAGGATCCACCACGCCCCCATGGCCCTAGGGCCACCGGAGACGAGGCGG
ACCTGCGGCGGAGCCGGCGAGAGGCACGAACCCTAGCTTTTC-TTGGAGGAG--GAGGTGGCGGC---------------
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>chr1B_2239
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-------------------------------------------------------TTTTTTTTTGCGAGAAAACTTTCAA
TCTATTCATCTTCCATCACGGCAGTACAACGAACACTAGAAATAATAAAAATTACATCCAGATCCGTAGACCACCTAGCG
ACGACTACAATCACTGAAACGAGCCGAAGGCGCGCCGCCGTCATCACCCCTCCCTCGCCGGAGTCGGGCACAACTTGTTG
TAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCCCGTAGGACCAGCGCACCAGAACAGCAACCGCCGCTGATGAAGAAT
AACGTAGATCGAAAGGATCCAACCTGAAGACACACGAACATAGACGAACCACAACCAGATCCGAGCAAATCCACCGAGGA
TAGATCCGCCGGAGACACACCTCCACACGCCCACCAACGATGCTAGACGCACCACCGAAACGGGGACTAGGCAGGGAGAC
CTTTATTCCATCTTCAGGGAGCCGCCACCGTCTCGTCTTCCTGAGTAGGACACAAACCCTAACAAATTTTGAAGGAACGA
CTAACAACGGAGCCCTCCCGCCGGCCCTTGCCAGGATCCACCACGCCCCCATGGCCCTAGGGCCACCGGAGGCGAGGCGG
ACCTGCGGCGGAGCCGGCGAGAGGCACGAACCCTAGCTTTTC-TTAGAGGAG--GAGGCGGCGGCT--------------
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>chr2D_2239
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-------------------------------------------------------TTTTTTTTTGCGAGAAAACCTTCAA
TCTATTCATCTTCTATCATAGCAGTACAACGAACACTAGAAATAATAAAAATTACATCCAGATCCGTAGACCACCTAGCG
ACGATTACAATCACTGAAGCGAGCCGAAGGCGCGCCGCCGTCATCGCCCCTCCCTCGCCGGAGTCGGGCACAACTTGTTG
TAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCCCGTAGGACCAGCGCACCAGAACAGCAACCGCCGCTGATGAAGAAT
AATGTAGATCGAAAGGATCCAACCTGAAGACACACGAACATAGACAAACCACAACCAGATCCGAGCAAATCCACCGAGGA
TAGATTCGCCGGAGACACACCTCCACACGCCCACCACCAATGCTAGACGCACCACCGGAACGGGGACTAGGCGGGGAGAC
CTTTATTCCATCTTCAGGGAGCCGCCGCCGTCTCGTCTTCCTAAGTAGGACACAAACCCTAACAAATCTCGAAGGAACGA
TTAACAACGGAGCCCTCCCGCCGGTCCTTGCCAGGATCCACCGCGCTCCCATGGCCCTAGGGCCACCGGAGACGAGGCGG
ACCTGCGGCGGAGCCGGCGAGAGGCACGAATCCTAGCTTTTC-TTGGAGGAG--GAGGCGGCGGCTG-------------
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>chr4A_2240
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--------------------------------------------------------TTTTTTTTGCGAGAAAACTTTCAA
TCTATTCATCTTCCATCACGGCAGTACAACGAACACTACAAATAATAAAAATTACATCCAGATCCGTAGACCACCTAGCG
ACGACTACAATCACTGAAACGAGCCGAAGGCGCGCCGCCGTCATCACCCCTCCCTCGCCGGAGTCGGGCACAACTTGTTG
TAGTAGACAGTCGAGAAGTCGTCGTGCTAAGGCCCCGTAGGACCAGCGCACCAGAACAGCAACCGCCGCTGATGAAGAAT
AACGTAGATCGAAAGGATCCAACCTGAAGACACACGAACATAGACGAACCACAACCAGATCCGAGCAAATCCACCGAGGA
TAGATCCGCCGGAGACACACCTCCACACGCCTACCAACGATGCTAGACGCACCACCGGAACGGGGACTAGGCGGGGAGAC
CTTTATTCCATCTTCAGGGAGCCGCCACCGTCTCGTCTTCCTGAGTAGGACACAAACCCTAACAAATTTTGAAGGAACGA
CTAACAACGGAGCCCTCCCGCCGGCCCTTGCCAGGATCGACCACGCCCCCATGGCCCTAGGGCCACCGGAGACGAGGTGG
ACCTGCGGCGGAGCCGGCGAGAGGCACGAACCCTAGCTTTTC-TTGGAGGAG--GAGGCGGCGGC---------------
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>chr6B_2240
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--------------------------------------------------------TTTTTTTTGCAAGAAAACTTCCGA
TCTATTCTTCTTCAATTATGGCAGTACAACGAACACCAGAAATAATAAAAATTACATCCAGATCCGTAGATCACCTAGCG
ACGACTACAAGCACTGAAGCGAGCCGAAGGCGCGCCGCCGTCATCGCCGCTCCCTCGTCGGAGTCGGGCACAACTTGTTG
TAGTAGACAGTCGGAAAGTCGTCGTGCTAAGGCCCCATAGGACCAGCGCACCAGAACAGCAACCGTCACCGATGAAGAAT
AACGTAGATCGAAAGGATTCAACCCGAAGGCACGCGAACATAGACGAACAACAACCAGATCCGAGCAAATCCATCGAGGA
TAGATCCGCCGGAGACACACCTCCACACACCTACCAACGATGCTAGACGCACCATCGGAACGGGGGCTAGGCGGGGAGAC
CTTTATTCCATCTTCAGGGAGCCGCCGTCGTCTCGTTTTCCTGAGCAGGACACAAACCC-AACAAAACTTGAAGAAAGAA
CTAACAACGAAGCCCTCCCGCCGGTCCTTTCCAAGATCCATCGTGCCCCCATGGCCCTAAGGCCACTGGAGACGAGGCGG
ACCTGCGGCGGCGCCGGCGAGAGGCACAAACCCTAGATTTGTTTTGGAGGAG--GAGGAGGAGGCGGTTG----------
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>chr7D_2241
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---------------------------------------------------------TTTTTTTGCGAGAAAACTTTCAA
TCTATTCATCTTCTATCATGGCAGTACAACGAACACTAGAAATAATAAAAATTACATCCAGATCCGTAGACCACCTAGCG
ACGGCTACAATCACTGAAGCGAGCCGAAGGCGCGCCGCTGTCATCACCCCTCCCTCGCCAGAGTCGGGCACAACTTGTTG
TAGTAGACAGTCGGAAAGTCGTCGTGCTAAGGCCCCGTAGGACCAGCGCACCAGAACAGCAACCGTCGCTGATGGAGAAT
AACGTAGATCGAAAGGATCCAACCTGAAGACACACAAACATAGACGAACCATAACCAGATCCGAGCAAATCCACCGAGGA
TAGATCCGCCGGAGACACACCTCCACACGCCCACCAACGATGCTAGACGCACCACCGGAACGAGGACTAGGCGGGGAGAC
CTTTATTCCATCTTCAGGGAGCCGCCGCTGTCTCGTCTTCCTGAGTAGGACACAAACCCTAATAAATCTTGAAGAAACGA
CTAACAACGGAGCCCTCCCGCTGGCCCTTGCCAGGATCCACCGTGCCCCCATGGCCCTAGGGCCACCGGAGACGAGGCGG
ACCTGCGACGGAGCCGGCGAGAGGCACGAACACTAGCTTTTC-TTGGAGGAG--GAGGAGGCGGC---------------
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>chr1D_2254
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----------------------------------------------------------------------AAACTTCAAA
TCTATTCATCTTCAATCATGACAGTATAACGAATATCAGAAATAATAAAAATTACACCCAGATCCGTAGACCACCTAGCG
ACGACTACAAGCACTGAAGCGAGCCGAAGGCGCGTCGCCATCATCGCCCCTCCCTCGCCGGAGTCGGGCACAACTTGTTG
TAGTAGACAGTCGGGAAGTCGTCATGCTAAGGCCCCATAGGACCAGCGCACCAGAACAGCAACCGCCGCCCATGAAGAAT
AATGTAGATTGAAAGAATCCAACCTGAAGACACACGAACATAGACGAACAATAACCGGATCCGAGCAAATCCACCGAGGA
TAGATCCGCCGGAGACACACCTCCACACGCCCACCAATGATGCTAGACGCACCACCGGAACGGGGGCTAGGCGGGGAGAC
TTTTATTCCATTTTCAGAGAGACGCCGCAGTCTCGTTTTCCTGAGCAGGACACAAACTCTAACACAACTCGAAAAAACGA
CTAACAACGAAACCCTCCCGCCGTCCCTTGCCTAGATCCACCGCGCCCCCATGGCCCTAAGGTCACCGGAGACGAGACGG
ACCTGTGGCGGCGCCGGCGAGAGGCACAAACCCTAGCTTTGTTTTGGATGAG--GAGGAGGCGGCGGCTGAGGTAACACG
C-------------------------------------------------------------------------------
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--------------------------------------
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
S---S--------S-------------------------------------------------S----------S-----
----------------S--S---------------------S-------------------------------S------
------S--------SS---------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S--------S----------------------SS----------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS--------------------------------SSSSSS-SS--------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S----S----SSS--------------
-------------------------------------------------------S------------------------
---------------------S----------------------------------------------------------
---------------------------------------------S-----------S----------------------
--------------------------------------------S-------------------S---S-----------
-----------S--------------------------S--------------S--S-----------------S---S-
-S------------------------------S------------------------S----------------------
-S-----------------------------------------S-----S------SS---SSS-----------S----
--------------------S-----------------------------S-------------S----S----------
-----------------------------------------------------------------------------S--
---------------------------------------------------S----S----------S------------
----------------------------------------S----S----------------------------------
--------------S--------------------------------------------------S--------------
---------------------------------------------S----------------------------------
S----------S--------------------------------------------------------------------
----------------S---------------------------------------------------------------
---------------------------S-------------------------------------------S--------
-S-----------S-----------------------S------------------------------------------
-----------------------S------------------------------------------S-------------
-------------------------------------------S-------------------S----------------
-------------------SS-S-----S---------
>forward_503
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CACGTTCTATCCTCGTCCCG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2214
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GGACTGAACGGGTTGGTCAT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_548
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GCGTGTGGAGGTGTGTTCTA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2396
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GGCAG
ATTGGTAGGGTAGGC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
