>input_sequence_58488
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------ATGAGCGAGCC
CGAGCGCGCCCATGTGATCCGCGGCCGCCGCTGCAGCTCCGTGCTGGACGATGACGATCTCCTCTGGGAGATCCTTCTCC
GCCTTTCGCCGCAGCCGTCCTCCCTCCCACGTGCCTCCGCAGTCTGCAAGCAGTGGCGGCGCCTCACAACGGATCCAGTG
TTCCTCCGCCGGTTCTGCGAGCATCACCGGGAGCCGCCCCTCCTTGGCGTCTTCGGGTGCGACAAAGAAAACATCGTGTT
CGCTCCTTCCCTGGGCCCTCCTGACCGTATCCCTTCCGTGCACTTTGACCTTGGACCACGGCGTAGCGGCAGGATCGCCA
AGCTTGTGAACCCT------------GTGCTCGGGTGCCACCACGGTCGCGTCCTCATTGGGGACTATATACGGAAACAA
GTCATTGTGTGTGACCCCATCACTGGCGAGCAATGTCGTGTGGCCGTCCCTTTGGAGTTCCGGAGGGACCACTTCTGCGG
GGCAGTGCTCTGCGCCGCTAGCGATCAAGGCCACGTGCACGGCGCATGCCATTCAAGCCCCTTTAAGGTGATATTGGTTT
CCACGTGGTGTTACGATGATGGACGAACCCGTGCATGTGTTTACTCCTCGGAGACCGGTGCATGGGGCAATATCATCTCA
ACGGCATTTCCACGTTTCATTTGGGATGCTGGTTGGTCTGGGTTGCTTGTTGGTAATGCACTTTACTGGTTGTGCGGAAA
TGCAGATTGCATACTTGAGTTTGATTTGAAAAAGCTGAGTCTTGCTATCATCACCGCTCCACCCATTCCAATGGAATCCT
GGTCTTGTCACATCATCCAGGCTGAGGATGACGCTATTGGCTTTGCTGCATTGTCCTACCCACGCTTCCAAATGTGGCAG
AGGAACTCCAATGGTCATGATGTTCCCACATGGGTGTTGTGGAAAAACATTGAAATACATAACATTCTTGAGCTACCTCA
TCATATTGATAGAAGGTCAACAGGTATATATGGATACTCTCAGGATACTGATGAAATATTTATACTTGTGGAACCCAACA
ATGTATACTTGGTTCAACTTAGGTCGATGCAATCAAAGAGACTTCATGGAATAGATTGTATCATGAAATACCATGCTTTC
ACGAGTTTCTGTACACCAGGTAATTTCTCATCCATAGTCCTTATATTGTCGGAGTAA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>chr3D_1_TraesCS3D01G013100
CGTCAAACAAAGCAAGAGAGACCACTGTTGGAATAAACTCTTGGAAATCATCAGGCCCGCCGTGGGAGCCAAACGCTCGG
CTTACGAAGGGTTCGGCAGGAGCAGCTTCCTTCAAATCTGAGAGGCCAAACTGTTGTTCAAATTCTTCTGACTTCTCTGC
CCAAATCTTGCGAACTAATCAAAAAACATGATGATGCAACTCAACTGTGAGCGCTCTGTTGGAGAGGAGAAACAATGTAT
GCACAGTATTATGTAGATGTAGATAGAAAGAAAAGGAGAAGGAACGGGCGAAGTG-----GACTCACTTTTCGTTGCGGT
TTCAAAAGCACACATGCCCCGTTTGTTTCTTCCTTTGTCGCTCCCAAAGATACAAGGGTTAATGCAAGTTATTTTCTCCA
TTTGCAGGCCTGAAGCAGAAAGTAAGTAAATAAATATAGATGCCTTAGGGCAACCAAGGTGGCAGCCGCCATGACATTCT
TGGAGCTCAAAGCTCTGATAGGTAATAAAAGTTCACGTAAAAACTCAAAAGTTGCTAGGTTTAGAGAGAATAGGCCATGC
ATGACAGATTCGTGAGCTTAACTCGAACCATCAAACTAAACTACGTACCCA--------CAACTCGAATCAAATCGGTCA
AAGCGCAGCTACTCCTGACTCAAACCAATCCAAAAGTCAGTTGGATCTGCCAATGGATGGATTTAAGAAAACGAGATTGT
TACCGAGGGGTGTTGAGTACGCTGCGGAATCGGGGTTTTGATCCGCGATTTTTTTGGGTTTTATATTGTGGAGGGATCGG
GGGGAAGAGA-GAGTCCTTCACGGGTAGGCCTTAAAATATCCAGACCGGGCCCTAATTTCCGACTGCAACTATATATAGA
GATCAGATCATATACGACACACAGATAAATAAAAGAAGGAAAAAAGCCAGGGATCAGCCCCCCCCCCCCAAAGAAATCCA
ACCTAGCTTGCGT---------------GGCAGTGTCTTTGATCGCCGTTCCACGTACGTCCCGCCGCCATGAGCGAGCC
CGAGCGCGCCCATGTGATCCGCGGCCGCCGCTGCAGCTCCGTGCTGGACGATGACGATCTCCTCTGGGAGATCCTTCTCC
GCCTTTCGCCGCAGCCGTCCTCCCTCCCACGTGCCTCCGCAGTCTGCAAGCAGTGGCGGCGCCTCACAACGGATCCAGTG
TTCCTCCGCCGGTTCTGCGAGCATCACCGGGAGCCGCCCCTCCTTGGCGTCTTCGGGTGCGACAAAGAAAACATCGTGTT
CGCTCCTTCCCTGGGCCCTCCTGACCGTATCCCTTCCGTGCACTTTGACCTTGGACCACGGCGTAGCGGCAGGATCGCCA
AGCTTGTGAACCCT------------GTGCTCGGGTGCCACCACGGTCGCGTCCTCATTGGGGACTATATACGGAAACAA
GTCATTGTGTGTGACCCCATCACTGGCGAGCAATGTCGTGTGGCCGTCCCTTTGGAGTTCCGGAGGGACCACTTCTGCGG
GGCAGTGCTCTGCGCCGCTAGCGATCAAGGCCACGTGCACGGCGCATGCCATTCAAGCCCCTTTAAGGTGATATTGGTTT
CCACGTGGTGTTACGATGATGGACGAACCCGTGCATGTGTTTACTCCTCGGAGACCGGTGCATGGGGCAATATCATCTCA
ACGGCATTTCCACGTTTCATTTGGGATGCTGGTTGGTCTGGGTTGCTTGTTGGTAATGCACTTTACTGGTTGTGCGGAAA
TGCAGATTGCATACTTGAGTTTGATTTGAAAAAGCTGAGTCTTGCTATCATCACCGCTCCACCCATTCCAATGGAATCCT
GGTCTTGTCACATCATCCAGGCTGAGGATGACGCTATTGGCTTTGCTGCATTGTCCTACCCACGCTTCCAAATGTGGCAG
AGGAACTCCAATGGTCATGATGTTCCCACATGGGTGTTGTGGAAAAACATTGAAATACATAACATTCTTGAGCTACCTCA
TCATATTGATAGAAGGTCAACAGGTATATATGGATACTCTCAGGATACTGATGAAATATTTATACTTGTGGAACCCAACA
ATGTATACTTGGTTCAACTTAGGTCGATGCAATCAAAGAGACTTCATGGAATAGATTGTATCATGAAATACCATGCTTTC
ACGAGTTTCTGTACACCAGGTAATTTCTCATCCATAGTCCTTATATTGTCGGAGTAATCAAATCCATTTATGTTCCATAC
ATCATTGTTCGATCATCTATATTGTGGTTTCTGCAAGTCACTAACAACCTATACCTAATCAACAAT------TCTGCTAC
AAAGACAACTTAAGTTATGGCCATAGTTTCTTTATGTTATTATTAGTTGTCTTCACTCTTGTGGGATCCAAATCAAATGT
CAAATGAATAAAAATTGTGAAATCAAATTACAGTATGCATGCAATGACTAGCTCATGTGTTTGAAGCAGCTAATGGCTAG
CTAGCAATTTTTATGTCGCTCGGCGCATCGCTAGCCAAATATGCCCTCTGTGTTATTGATACTTCAAAACACCTTGATAT
ATAGAAACCACGGTATGCTTCATCCACAAGCAAAAATAATGCATTTTTTTAGTACTATGGTTTTTATAATACTTTGCTGC
CAAACCCAACCTTAATCTTTTATCAGCATGTGATCTACTACTAA-TTTGAATCGTATGACCCCACATTTACTCTGAATCA
TGTAAGGCGTCCGAGCGGGGAAGAGGACTACTCCAAAATGATTCTTGAGAGGAACAAGTCGACACCACTGACAACAACTC
TATCGTCACTCTGCACCCGACCACCCGTACACCATGGACAAGACGCAACTCTTTCTTGGCGCCAACCAGTTGATGGTCAA
TGATGACAACTCCATCATTTCTCTACACCCGGACACCATGGACATGTTGCGGCTGCATGTGAAAACACTATCCTGCTGAA
GGGGTGTGTGCTA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CCTAATCTATTCTTCCTAGATGCAAGGCTCAAGACATTATGACA
TGACGGACTAATAGATCAGTAATATGATCCTTAATAATCCCTA---TTTTTTCCTGTTGCAACGCACAGACGCATTTCCT
AGGAAGTAGAATAATACTCCCTCTGTTCCTAAATATAAGACATTTTAGAGATTCCACTATGGACTACATACGGATGCATA
TAGACATATTGCAAAGTGTGCATTTATCCAATTTGCTTCGTATGTAGTCC
>chr3A_263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------ATAGAAAGAAAAGGAGAAGGAACGGGCAAATTAAAATCGACTCACTTTGCGTTGCGGT
TTCAAAAGCACACATGCCCCGTTTGTTTCTTCCTTTCTCTCTCCCAAAGATATAAGGGTTAATGCAAGTTATTTTCTCCA
TTTGCAGGCCTGAAGCAGAAAGTAAGTAAATAAATATAGATGCCTTAGGGAAACCAAGGTGGCAGCCGCCATGACATTCT
TGGAGCTCAAAGCTCTGATAGGTAATAAAAGTTCACGTAAAAACTCAAAAGTTGCTAGGTTTAGAGAGAATAGGCCATGC
ATGACAGATTCGTGAGCTTAACTCGAACCATCAAACTAAACTACGTACCCACAAGGCCACAACTCGAATCAAATCGGTCA
AAGCGCAGCTACTCCTGACTCAAACCAATCCAAAAGTCAGTTGGATCTGCCAATGGATGGATTTAAGAAAACGAGATTGT
TACCGAGGGGTGTTGAGTACGCTGCGGAATCGGGGTTTTGATC---GACAATTTTGGGTTTTATATT----AGGGATCGG
GG----GAGA-GAGTCCTTCACGGGTAGGCCTTAAACTATCCAGACCGGGCCCTAATTTCCGACTGCAACTATATATAGA
GATCAGATCATGTACGACACACAGATAAATAAAGGAAGGAAAAAAGCCAGGGATCAGCCCCCCC-----AAAGAAATCCA
ACCTAGCTTGCGT---------------GGCAGTGTCTTTGATCGCCGTTCCACGTACGTCCCGCCGCCATGAGCGAGCC
CGAGCGCGCCCATGTGATCCGCGGCCGCCGCTGCAGCTCCGTGCTGGATGATGACGATCTCCTCTGGGAGATCCTTCTCC
GCCTTTCGCCGCAGCCGTCCTCCCTCCCGCGTGCCTCCGCAGTCTGCAAGCAGTGGCGGCGCCTCACAACGGATCCAGTG
TTCCTCCGCCGGTTCTGCGAGCATCACCGGGAGCCGCCCCTCCTTGGCGTCTTCGGGTGCGACAAAGAAAACATCGTGTT
CGCTCCTTCACTGGGCCCTCCTGACCGTATCCCTTCCGTGCACTTTGACCTTGGACT---GCGTAGCGGCTGCGTCAACC
TTT---TGAACCGT------------GTGCTCGGGTGCCGCCACGGCCGCGTCCTCGTTGGGGACTATGTACGGAAACAA
GTCATTGTGTGCGACCCCATCACAGGCGAGCAGTGCCGTGTGGCCGTCCCTTTGGAGTTCCGGAGGGTCCGCTTCTGCGG
GGCGGTGCTCTGCACCGCCGGCGATCAAGGCCACGTGCACGGCGCATGCCATTCAAGCCCCTTCAAGGTTATATTGGTTT
CCATGTGCTGTTTCCATGATGAACGAACCCTGGCATGTGTTTACTCCTCGGAGACTGGTGCATGGGGCAATCTCATCTCG
ACGACATTTCCACGTTTCACTTGGGATGCTGGTTCGTCTGGGCTGCTTGTTCGTAATGCACTTTACTGGTTGTGCACAAA
TGAAGATCGCATACTTGAGTTTGACTTGGAAAAGCAGAGTCTTGCTATCATCACCGTTCCACCGATTACAATGGAATCCT
GGTCTTGTCACATCATCCAGGCTGAGGATGACACTATTGGCTTTGCTAAATTGTCCGGCTCACACTTCCAAATGTGGCAG
AGGAACTCTAATGTTCATGATGTTCCCACATGGGTGTTGTGGAAGAACATTGAAATATGTAACATTCTTGAGCCACCTCC
TCATATTGATAGAAGCTCAACAAGTATATTGGGATACTCTGAGGATACTGATGAAATTTTTATATGGATGGAACCCAATA
A---ATACTTGGTTCAACTTAAGTCGATGCAATCCAAGAGACCTAAAACAAATTATACCTC---GAATTACCATGCTTTC
ACGAGTTTCTATACACCAGGTATTTTCTCATCCATAGTATTTATATTGTGAGAGGAGCCTATTCCATTTATGTTCCGTAC
ATAATTGTTCGATCATCTATATTGTGGTTCTTGCTAGTCATTGACAACCTAAACCTAATCAACAATTGCCCCTCTGCTAC
AAAGACAACTTAAGTTATGGTCCTAGTTTCTTTATGTTATTATTAGTTGTCCTCACTCTTGCGAGATCCAAATCAAATGT
CAAATGAATGAAAATTGTGAAATCAAATTACACTTTGCATGCAACGACTAGCTCATGTGTTTGAAGCAGCTAATGGCTAG
CTAGCAATTTTTACGTCGCTGTGTGCATCACTAGCCAAATATGCCCTCTGTGTTATTGATACTTCAAAATACCTTGATAC
ATAGAAACCACTGTATGTTCTATCCACAAGCAAAAATAATGCA--TTTTTAGTACTATGGTTTTTATAATACTTTGCTGC
CAATCCCAACCTTAATCTTTTATCAGCATGTGATCTACTATTAATTTTGAATCTTATGACCCCACATTTACTCCGAATCA
TGTAAGGCGTACGAGCGGGGAGGAGGACTACTCCAAAATGATTCTCGAGAGGAACAAGTCGACACCACTGACAACAACTC
TATCATCACTCTGCACCCGACCACCCGTACACCATGGACAAGATGCAACTCTTTCTTGGCGCTAACCGGTTGATGGTCAA
TGACCACAACTCCATCATTGCTCTACACCTGGACACCATGGACATGTTGCAGCTTCCCGTGGAAACACTATCCCGCTGAA
GGGGTGTGCTACCTAAGGCTGGTCATAGTGGGGAGTAACTTAGACTAGTATCATGCATATGACACTAGTCTAAGTTACTA
CCTTCATATTGCAAAGTAACATAACAGTAGTATCATAGATGGCTTCATTTATTAGCTCAAAGACTCATCTTGTCTTGGAA
AGCGCTATGTTACAGTAACATATTATGTTACCACCTCTCATTAATTACTTGCCACATAAGCAGAATTTTCTCGTAGTGTG
CTATGTTACTAGCTAAGTTACTCTCACTATGACTAGCCTAATCTATTCTTCCTAGATGCAAGGCTCATGACATTATGACA
TGATGGACAAATAGATCAGTAATCTGATCCTTAATGATCCATATATTTTTTTCCTCTTGCAACGCACAGACACATTTCCT
AGTAACTAGAATAATACTCCCTATGTTCCTAAATATAAGACATTTTAGAGATTCCACTATGGAC----------------
--------------------------------------------------
>chrUn_680
ATGGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGGATTTAAGAAAACGAGATTGT
TACCGAGGGGTGTTGTGTACGCCGCGGAATCGGGGTTTTGATCCGCGACTTTTTGGGGTTTTATATCGTGGAGGGATGGG
GGGGAAAGAGGGAGTCCTTCACGGGTAGGCCTTCAAATATCCAGACCGGG------------------------------
-ATCAAATCGTATACGACACACAGATAAATAAAGGAAGGAAAAAAGCCAGGGATCAGCCCCCGAAAGAAGAAGAAATCCA
ACCTAGCTTGCGTTTGGCCCCCGAGCGTGGCAGTGTCTTTGATCGCCGTTCCACGTACGTCCCGCCGCCATGGGCGAGCG
CGAGCGCGCCCACGTGATCCGCGGCCGCCGCGGCAGCTCCATGCTGGATGATGACGATCTCCTCTGGGAGATCCTTCTCC
GCCTTCCGCCGCAGCCGTCCTCCCTCCCACGTGCCTCCGCAGTCTGCAAGCAGTGGCGGCGCCTCACAACAGATCCAGTG
TTCCTCCGCCGGTTCTGCGAGCATCACCGGGAGCCGCCCCTCCTTGGCGTCTTCGGGTACCACGAAGAACACTTCGTGTT
CGCTCCTTCCCTGGACCTCCCCAACCCT-----ACCCGTGCGCTTTGACCTTG---------------------------
------TGAGCCAT------------GTGCTCGGGTGCCGCCACGGCGGCGTCCTCATTAGGGACCATATACGGAAACAA
GTCATTGTGTGTGACCC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>chrUn_680
ATGGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGGATTTAAGAAAACGAGATTGT
TACCGAGGGGTGTTGTGTACGCCGCGGAATCGGGGTTTTGATCCGCGACTTTTTGGGGTTTTATATCGTGGAGGGATGGG
GGGGAAAGAGGGAGTCCTTCACGGGTAGGCCTTCAAATATCCAGACCGGG------------------------------
-ATCAAATCGTATACGACACACAGATAAATAAAGGAAGGAAAAAAGCCAGGGATCAGCCCCCGAAAGAAGAAGAAATCCA
ACCTAGCTTGCGTTTGGCCCCCGAGCGTGGCAGTGTCTTTGATCGCCGTTCCACGTACGTCCCGCCGCCATGGGCGAGCG
CGAGCGCGCCCACGTGATCCGCGGCCGCCGCGGCAGCTCCATGCTGGATGATGACGATCTCCTCTGGGAGATCCTTCTCC
GCCTTCCGCCGCAGCCGTCCTCCCTCCCACGTGCCTCCGCAGTCTGCAAGCAGTGGCGGCGCCTCACAACAGATCCAGTG
TTCCTCCGCCGGTTCTGCGAGCATCACCGGGAGCCGCCCCTCCTTGGCGTCTTCGGGTACCACGAAGAACACTTCGTGTT
CGCTCCTTCCCTGGACCTCCCCAACCCT-----ACCCGTGCGCTTTGACCTTG---------------------------
------TGAGCCAT------------GTGCTCGGGTGCCGCCACGGCGGCGTCCTCATTAGGGACCATATACGGAAACAA
GTCATTGTGTGTGACCC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>chr3A_1050
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CCGTGCTGGAAGACGCCGATCTCCTCTGGGAGATACTCCTCC
GCCTCCCGCCGCAGCCGTCCTCCCTCCCGCGTGCCTCCGCAGTCTGCAAGCAGTGGCGGCGCCTCGCCACCGATCCTAGG
TTCCTCTGCCAGTTCTACAAGCATCACCGGAAGCCCCCCCTCCTTGGCTATTTCGAGTACCACGAAGA---CATTGTGTT
CACTCCAGTTCTGGACCCTCCCGACCGTGTCCCACCCATTCGCTTTGACCTTGTACGATTTGGCAGACGCCGCGATGATG
ACATCCGCTTCCCTCCCGCAAACAAAGTGCTTGGGTGCCGCCACGGCCTTGTCCTTGTCGGCGACCATTTGTGGAGAGAG
GTCATTGTGTGTGACCCCATCACAGGCGAGCAGTGCCCCGTGACAGCCCCTTTGGAGTTCCAGAGGGGGTGGTTCAACGG
GGCGGTGCTCTGCGCTGCCCGCGATCAGGGCCACGTGCACGGCGCATGCTATTCAAGCCCCTTTAAGGTGGTCTTGGTGT
CCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>chr3A_1050
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CCGTGCTGGAAGACGCCGATCTCCTCTGGGAGATACTCCTCC
GCCTCCCGCCGCAGCCGTCCTCCCTCCCGCGTGCCTCCGCAGTCTGCAAGCAGTGGCGGCGCCTCGCCACCGATCCTAGG
TTCCTCTGCCAGTTCTACAAGCATCACCGGAAGCCCCCCCTCCTTGGCTATTTCGAGTACCACGAAGA---CATTGTGTT
CACTCCAGTTCTGGACCCTCCCGACCGTGTCCCACCCATTCGCTTTGACCTTGTACGATTTGGCAGACGCCGCGATGATG
ACATCCGCTTCCCTCCCGCAAACAAAGTGCTTGGGTGCCGCCACGGCCTTGTCCTTGTCGGCGACCATTTGTGGAGAGAG
GTCATTGTGTGTGACCCCATCACAGGCGAGCAGTGCCCCGTGACAGCCCCTTTGGAGTTCCAGAGGGGGTGGTTCAACGG
GGCGGTGCTCTGCGCTTCCCGCGATCAGGGCCACGTGCACGGCGCATGCTATTCAAGCCCCTTTAAGGTGGTCTTGGTGT
CCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS---------------------------S--S-S---------------S---------
------------------------------------S--S------------S---------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
---------------------------------S------------------------------SSSSS-----------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-SS----------S-SS---S-S
-SS-SS---------------------------------S------S---------------------------------
-----------------------S--------S--S-------------------------------S--S---------
---S--------------SS------------------------------------------------------------
---S---S----S-S------S--------SS-----------------------S---------------S-------S
---S---------------S--------------S-------S--------S-----------------------SS---
--S----S----------------S---S------S--------------------S------S---S------------
--------------------------------S--------------SS-------SS-S---S----------------
--------S----S------------------------------S------------SS--------------S-----S
---------------S------S------SS---------S----------------S------SSSS----------S-
-SSS-----------------S------------S-------S-S-SSS--SSS--SSSSSSSS---S------------
----------S-----------S---------------SS---------SS---S-SS-S-S--------------S---
--S--------------------------SS---S-----S-S--------S----------------------------
--------------------S-S----------------------------S---------S-S----------------
---------S----------------------S-S---------S-----------------------------------
-------------S------SS-S-----S---------------------------------------S---------S
-----------S-----S-SS----------------------SS-----------------------------------
---S------------------------------------S------------S-------------------S------
----------S----------S-----------------------S----------------------------------
----S--------------------------------------S------------------S----S------------
---SS--------------S---------S--------------------S---S-SS---S-----------S------
--------SSSSS-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
---S----S--------------S-----------S----S--------------S---------------S--------
--S--S----------------S-----------------------------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_220
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TCAACTGTGAGCGCTCTGTT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_1351
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AGGATCGCCA
AGCTTGTGAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>forward_221
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CAACTGTGAGCGCTCTGTTG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_1360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
AGCTTGTGAACCCTGTGCT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>forward_290
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AAAAGGAGAAGGAACGGGCG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_1700
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TTTGGGATGCTGGTTGGTCT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>forward_1631
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TACGATGATGGACGAACCCG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_2900
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TCTCTACACCCGGACACCAT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
