>input_sequence_58415
--------------------------------------------------------------------------------
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--------------------------------------------ATGGAAATGTCTTTGGCTGACTGCTGGGGCCCTGCC
CCCGCTTCCCCTATTGGGTTTGAGGGCTACGAGAAGCGCCTCGAGATAACTTTCTCTGACGCGCCTGTCTTTGCGGACCC
GTGCGGCCGCGGCCTTCGCGCCCTCTCCCGCCACCAGATCGACTCCTTCCTCGATCTTGCACGGTGCACCATTGTGTCCC
AGCTCTCGAACAAGCAGTTCGACTCTTACGTGCTGTCGGAGTCGAGCCTCTTTGTCTACTCCCACAAGGTTGTCATCAAA
ACCTGTGGGACAACAAAGCTCCTGCTGTCGATTCCCCGCATCCTGGAGCTTGCTGCGGAGCTGTCGCTGCCACTTCTTTC
AGCGAAGTACTCCCGCGGGGCGTTCATCTTCCCCGGCGCGCAGCCGGCGCCGCACCGCAGCTTCTCGGAGGAGGTGTCCG
TGCTGAACGGCTTCTTTGGTGGCCTCAAGTCAGGTGGCAATGCATATGTGATGGGTGATGCGTTCAGGCCCAAGAAGATG
TGGCACGTCTACTACGCCACTGAGGAGCCTGAGCAACCCATGGTGACGCTCGAGATGTGCATGACTGGGCTGGACGCCGG
GAAGGCCGCGGTGTTCTTCAAGAACTCTGCCGACGGCGGCTGCTCCTCGGCCAAGGAGATGACCAAGGTCTCGGGGATCT
CTGCTATCATCCCCGAGATGGAGATCTGCGACTTCGACTTCGACCCGTGCGGCTACTCGATGAACGGCGTCTGCGGCCCT
GCAGCCTCCACAATCCACGTTACTCCCGAGGAGGGCTTCAGCTACGCGAGCTACGAAGCGATGAACTTCAACCCTGGCTC
CCTGGTTTACAGTGACCTGATCAAGAGGGTGCTGTCATGCTTCCGCCCGTCAGACTTCTCCCTCGCCGTCACCATCTTCG
GTGGCCAAGGCTTCGCCAAATCATGGGCGGCCGATGCGGAGGT---CTGCTCGTACCTGCTCGAGGATGTCGTCGAGCAG
GAGCTTCCCGGCGGTGGCCTGCTCATGTACCAGAGCTTCAGTGCGGTTGCCCCTGGCGCCGTGTCACCGAGGTCGACCTT
GGATGATGGCTGGAGCAGCGATGGGATGGAGACGGCCGTGCAGGGCGAGGAGACGTGCGTCTGGGGAGTGGAGAAGAAGG
TGGCCGAGAAAGGTGTCGCTGCCTG----A--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr5D_1_TraesCS5D01G228900
ATTATGTTCACCGAGCCGGCTCTGGTTTGCATTTATTTTTTATTTAATGTCTTTTAATTGCGCATTTAGTG---GCAATT
ATAACACATTTTGTCCTGGAGGAAAACCTGGAGATAAAAAATGCAACAAAAAAAATGTGTGCTTGCTATCTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GAGTAAGTATGGTTG
ACATATCGCATGCTACTGCTTTT---------------------------------------------------------
-----CTGTGCCCACATTACACTCCAAATTGTTAATTCATTTTGTAC--TAGTTAATTGATAGGTTCCATCTTCTAAAAA
TATTACGGAATTGATTCTAGGCCAATCCTAAGGAGTATGCAGTGTCTCTAGTTCAAGTGGTTCATGATGTTCATGATTGT
CTAAACATATT--GCTTTAACCATCTAAAAGTATGCTCATCAGCTCATGTGTTTGCTACTTCAGATCTACT----G--TA
TTAACCGTATGAATTATGCTCATCAGCTCAATATGCGTTTGCTTCTTCAGATCTTAATAATGCC--ATATTACTGCCATA
TTACTTGAGTCACTAACCTTTTTTCTTCTCTCATCACCAGCACAAAGGAACGAGTGTGAATGTTCTAATGATGTCAAAAG
CCGGCAAAAAGTCTAGTAGTAGTAATTCCATGTACGAAGCTCCCCTTGGCTACAAGATTGAGGACGTTCGCCCTGCCGGA
GGAATCAAGAAGTTCCAGTCTGCTGCCTACTCCAACGTAAGCACCACAAAGACTTGACCAATGTAGTTACATAGATGTAA
ATTTGAATATGCTCGTTGATGCATTTCATATTCTTGTTTCTAACAATTATTTCTGTCTGATATTTGTTTTGCAGTGCGCC
CGCAAGCCCTCCTGATATTCCCTTCGCATGCCTCTCGACGTAGCTTAGGATTTTTTTTACTGCAATTTCCCTTTCC----
-----------CTTTTGTCCAATAAATCTCCCTTGGCTGGCTGATTCCTCTGCTACTTGGCTTGTCCTCTCCGATCTCCT
CTGTCCTCTGTCATCCTCTCTTCTTCCTCGCGGCACCCGATCAGATGGAAATGTCTTTGGCTGACTGCTGGGGCCCTGCC
CCCGCTTCCCCTATTGGGTTTGAGGGCTACGAGAAGCGCCTCGAGATAACTTTCTCTGACGCGCCTGTCTTTGCGGACCC
GTGCGGCCGCGGCCTTCGCGCCCTCTCCCGCCACCAGATCGACTCCTTCCTCGATCTTGCACGGTGCACCATTGTGTCCC
AGCTCTCGAACAAGCAGTTCGACTCTTACGTGCTGTCGGAGTCGAGCCTCTTTGTCTACTCCCACAAGGTTGTCATCAAA
ACCTGTGGGACAACAAAGCTCCTGCTGTCGATTCCCCGCATCCTGGAGCTTGCTGCGGAGCTGTCGCTGCCACTTCTTTC
AGCGAAGTACTCCCGCGGGGCGTTCATCTTCCCCGGCGCGCAGCCGGCGCCGCACCGCAGCTTCTCGGAGGAGGTGTCCG
TGCTGAACGGCTTCTTTGGTGGCCTCAAGTCAGGTGGCAATGCATATGTGATGGGTGATGCGTTCAGGCCCAAGAAGATG
TGGCACGTCTACTACGCCACTGAGGAGCCTGAGCAACCCATGGTGACGCTCGAGATGTGCATGACTGGGCTGGACGCCGG
GAAGGCCGCGGTGTTCTTCAAGAACTCTGCCGACGGCGGCTGCTCCTCGGCCAAGGAGATGACCAAGGTCTCGGGGATCT
CTGCTATCATCCCCGAGATGGAGATCTGCGACTTCGACTTCGACCCGTGCGGCTACTCGATGAACGGCGTCTGCGGCCCT
GCAGCCTCCACAATCCACGTTACTCCCGAGGAGGGCTTCAGCTACGCGAGCTACGAAGCGATGAACTTCAACCCTGGCTC
CCTGGTTTACAGTGACCTGATCAAGAGGGTGCTGTCATGCTTCCGCCCGTCAGACTTCTCCCTCGCCGTCACCATCTTCG
GTGGCCAAGGCTTCGCCAAATCATGGGCGGCCGATGCGGAGGT---CTGCTCGTACCTGCTCGAGGATGTCGTCGAGCAG
GAGCTTCCCGGCGGTGGCCTGCTCATGTACCAGAGCTTCAGTGCGGTTGCCCCTGGCGCCGTGTCACCGAGGTCGACCTT
GGATGATGGCTGGAGCAGCGATGGGATGGAGACGGCCGTGCAGGGCGAGGAGACGTGCGTCTGGGGAGTGGAGAAGAAGG
TGGCCGAGAAAGGTGTCGCTGCCTG----AGA------------TCCAGAGACGTCTGAAGTCTCTGAGATGGTGTCCTG
CTATGGTAGTTTCGGTTAAGCAGCTGGCCGGGTGACCGGCAAAGCCTACTGTATCCCGTGTTACTGCTTTT-ATT---TT
TATGTCATCGTTCCTGCCAAATAAG-TGCTCTAGATGGTCTGCTGCGTCTGCCATA--GTGAGCAAAAGAGTCTATCTAG
GTTGGTAG----TAAGTATTTATGTCTGTCGCCAATGCTCTTGTGGGGAGGATGATATTGCAACTT--------------
-------------------------CTATGTTCAATCAAATGTTGGAGTTCCATGTTAATCATGTCC-------------
------------------------------ATCTATT----TGTCAGTCTTCTGCATACATTGTAATACTGAATATTGTC
CAGAAGAGAAGCCAAAGAAAGTTGTACTGTGGTCAATTTTCGC-TGAATTAGTTGGTTCCTGCTGGTTTATGTGCCATGT
CAGAGTAGCTCTGCTGAATTGAGTTTACCACTTTCTGTCTTTCTTTATGACACGCTGGCGTCTTCCCTTCGTCTTCTACA
CGTGCCTAGAACTATCACTGAACTGAACATACATGGAACACTAGATAACTGGACTAGAACCCACCGAACTGAG-TATATC
ACTTCTGTACGTATTAAAAACTTTAGT--------TGGTCAACACCTGAACTGAAATATA------GTACATCGATACAT
AGCACTGCTTGGTTTCCAGTGAAATGATTACAGGGATGGATAGGCTGT-----TCAAAGAAATACGGCATCAAATGCACC
AGTGGTCTAGTGGTAGATTAGTACCCTGCCACCGTACAGACCCGGGTTCGATTCCCGGCTGGTGCATCTTACAA-TTTTT
TATATTCATTTCCCTTTGGACATATATACAGTATACTTAATCAAATTTCGTTCTCTCACTGTAGAAGTTCTAAAAGGCTC
GTCATTTGGGACTTTGTTCTCTGGGACTGGGTCTCTGTAGACAACTTGACCATTCATACTTGTGCACGGAATTACCAATC
CTTAAGTGCAATTCTGTCCGGACACGACTCATTTTCATTCA
>chr5B_1
ATTATGTTCACCGGGCGGGCTCTGGTTTGCATTGATTTTTTATTTGATGTCTTTTAATTACGCATTTAGTG---CCAATT
ATAACACATTTTGTCCTGGAGGAAAACCTGGAGATAAAAATGCAACACATTTTTTTGTGCTTTAGGTATCTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TAGTAA-TATGGTTG
ACATATCGGATGCTACTGCTTTT---------------------------------------------------------
-----CTGTGCCCACATTACACTCCAAATTGTTAATTCCTTTTGTTCTATAGTTAATTGATAGGCTCGATCTTCTAAAAA
GATTACGGAATTGATTCTAGGCCAATCCTAAGGAATATGCAGTGTGTCTAATTCAAGTGGTTCATGATTGTCT-------
---AAACATATTTGCTTTAACCATCTAAAAGTATGCTCATGAGCTCATGTGTTTGCTACTACTCCCAATCGACTGTACTA
TTAACCATATGAATTATGCTCATCAGCTAAATAGGCGTTTGCTTCTTCAGGTCTTAATAATGCCGCATGTTACTGCCATA
TTACTCGAGTCACTAACTTTTTTTCTTCTCTCATCATCAGCACGAAGGAACGAGTGTGAATGTTCTAATGATGTCAAAAG
CCGGCAAGAAGTCTAGTAGTAGTAATTCCATGTACGAAGCTCCCCTCGGTTACAAGATTGAGGACGTTCGCCCTGCCGGA
GGAATCAAGAAGTTCCAATCTGCTGCCTACTCCAACGTAAGCACCACAA-GACTTAACCAATGTAGTTACATAGATGCAA
ATTTGAATATGCTCATTGATGCATTTGATACTCTTGTTTCTAACAATTACAC---TCTGATCTTTGTTTTGCAGTGCGCC
CGCAAGCCCTCCTGATATTCCCTTCGCATGCCTTTCAACGTAGCATAGGATT-C-TTTACTGCAATTTCCCTTTCCTTTT
GTCCAATAAACCTTTTGTCCAATAAATCTCCCTTGGCTGGCTGCTTCCTCCGCTACTTGGCTTGTCCTCTCCGATCTCCT
CTGTCCTCTATCATCCTCCCTTCTTCCTCGCGACACTTGATCAGATGGAAATGTCTTTGGCTGACTGCTGGGCCCCTGCC
CCCGCCTCCCCTATTGGGTTTGAGGGCTACGAGAAGCGCCTCGAGATAACTTTCTCCCACGCGCCTGTCTTTGTGGACCC
GTGCGGCCGTGGCCTTCGCGCCCTCTCTCGACACCAGATCGACTCCTTCCTCGATCTTGCACGGTGCACCATTGTGTCCC
AGCTCTCGAACAAGCAGTTTGATTCTTATGTGCTCTCGGAGTCGAGCCTCTTTGTGTACTCCCACAAGGTTGTCATCAAA
ACCTGTGGAACAACAAAGCTCCTGCTGTCGATTCCCCGCATCCTTGAGCTTGCTGCGGAGCTGTCGCTGCCACTTCTTTC
AGCCAAGTATTCCCGCGGGACGTTCATCTTCCCCGGCGCGCAGCCGGCGCCGCACCGCAGCTTCTCGGAGGAGGTGTCCG
TGCTGAACGGCTTCTTTGGTGGCCTCAAGTCAGGTGGCAATGCATATGTGATGGGTGATGCGTTCAGGCCCAAGAAGATG
TGGCACGTCTACTACGCCACGGAGGAGCCTGAGCAGCCCATGGTGACGCTCGAGATGTGCATGACTCGGCTGGACGCCAG
GAAGGCCGCGGTGTTCTTCAAGAACTCTGCCGACGGCGGCTGCTCCTCGGCCAAGGAGATGACCAAGGTCTCTGGCATCT
CTGCTATCATCCCCGAGATGGAGATCTGTGACTTCGACTTCGACCCGTGCGGGTACTCGATGAACGGCGTCTCCGGCCCT
GCAGCCTCCACCATCCACGTCACTCCTGAGGAGGGCTTCAGCTACGCGAGCTATGAAGCGATGAACTTCAACCCTGGCTC
CCTGGTTTACAGTGACCTGATCAAGAGGGTGCTGTCATGCTTCCGCCCGTCAGACTTCTCCGTCGCCGTCACCATCTTCG
GTGGCCAAGGCTTCGCCAAATCATGGGCGGCCGGTGCGGAGGT---CTGCTCCTACCTGTGCGACGATCTCGTCGAGCAG
GAGCTTCCGGGCGGTGGCCTGCTCATGTACCAGAGCTTCAGTGCAGTTGCCCCTGGCGCCGTGTCCCCGAGGTCGACCCT
GGATGATGGCTGGAGCAGCGACGGGATGGAGATGGCCGCGCAGGGCGAGGAGGCGTGCGTCTGGGGAGTGGAGAAGAAGG
TGACCGAGAAAGGTGTCGCTGCCTG----AGAGAAATCTGCGGTTCCAGAGACGTCTGAAGTCTCTGAGATGGTGTCCTG
CTATAGTAGTTTCGGTTAAGCAGCTGGCCGGGTGATCGGCAAAGCGTACTGTATCCCGTGTTACTGCTTTT-ATTATTTT
TCGGTTGTTATTCCTGCCGAATAAG-TGCTCTAGATGGTCTGCTGCGTCTGCCATATAGTGAGCAAAAGAGTCTATTCTG
GGGAGAATGTACTAAATATTTATGTCTGTCGCCAATGCTCTTGTGGGGAGGACGATATTGTAACTTACTGCTACCTCGTT
-CATAATATGAGAGTGTTTTTGACACTATGTTCAATCAAATGTTGGAGTTCTCCGTTAATCTTGTCCGACATGCGAGTTG
TGTTTGCCTGATATTGTAACCAGGCTTCTTATTTG-TCTTGTGTCAGTCTTCGGCATACATTGTACTG-AATATTGTCT-
-AGAAGAGAAGCCAAAGGAAATTGTACTGTGGTCAATTTTCTTTTGAGTTAGTTGGTTTCTGCTGGTTTATGTGCCATGT
CAGAGTAGCTCTGCTGAATTGAGTTTT--------TGTCTTTCTTTATGACACGCTGGCGTCCTCCCTTCTTCTCCT-CA
CGTGCCTAAAACTATCACTCAACTGA----ACATGGAACACTAGATAACTGGACTAGAACCCACCGAACTGAG-TTTATC
ACTTCCGTACGTAGTTAAAAGCTTAGT--------TGGTCAACACTTGAACTGAAATATACTCTCAGTGATCTTA-----
--------------TCTAGTGAAAAGAATACTGTCGCTTAAATAATTAAGGCTTTTACAAATTGCA-CATC-AAAGCACC
AGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCATCTCTCACCTTTTT
TATATTCATTTCCTTTTGGGAC---ATACGCTATACTTAATCAAATTT--------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr5A_1
ATTATGTTCACCCAGCGGGCTCTGGTTTGCATTGATTTTTTATTTAATGTCTTTTAATTACGCATTTAGTAGTAGCAATT
ATAACACATTTTGCCCTGGAGGAAAACCTGGAGATAAAAAATGCAACAAAAATTATC--TGCTTGGTATCTACTGCTTGA
TAAAAAAATTGTGCTTGATAAAAACGCATTTAGGCTGGTCACAGTGGGGAGGAACTTAGGAGTAACATCACACACTCCAA
TACAACTTTGCTTATGTGGCATGTATTTAATGAAGAGAGAGGTGCTTGTGGTAACTAGCTAAGTTATCGGAACATCACAC
ACTCCAAGAAACAATGAGTCTATAACCTAATAAATACATCATTGCATGACACTACATAGATGTTCCTACCCACTATGGAG
GTAGTAACATAGTCTAGGGAAGTGTGAAGTTACTAGCTTATGTTCTTGCCCATTGTGACCAGCCTTAGTAG-CATGGTTC
ACATACCGCATACTACTGCTCTTCTGTGCCTACATTATACTAATTCATTTTGTACTACTAGTTAATTGATGCTAGTACTG
CTTTTCTGTGCCCACATCACACTCCAAATTGTTAATTCATTTTGTAC--TAGTTAATT------------------AAAA
TATTACGGAACTGATTCTAGGCTAATCCTAAGGAATATGCAGCGTGTCTAATTCAAGTGGTTCATGATTGTCT-------
---AACATATT--GCTTCAACCATCTAAAAGTATGCTCATCAGCTCATGTGTTTGCTACTTCATATCTACTTACTG--TA
TTAACCGTATGAATTATGCTCATCAGCTCAATATGCGTTTGCTTCTTCAGGTCTTAATAATGCC--ATGTTACTGCCATA
TTACTTGAGTCACTAACCTTTTTTCTTCTCTCATCACCAGCACAACGGAACGAGTGTGAATGTTCTAATGATGTCAAAAG
CCGGCAAGAAGTCTAGTAGTAGTAATTCCATGTACGAAGCTCCCCTTGGCTACAAGATTGAGGACGTTCGCCCCGCCGGA
GGAATCAAGAAGTTCCAGTCTGCTGCCTACTCCAACGTAAGCACCACAAAGAC---ACCAATGTAGTTACATAGATGCAA
ATTTGAATATGCTCATTGATGCATTTGATACTCTTGTTTCTAACAATTATTTCTGTCTGATCTTTGTTTTGCAGTGCGCC
CGCAAGCCCTCCTGATATTCCCTTCGCATGCCTCTCGACGTAGCTTAGGATTTC-TTTACTGCAATTTCCCTTTCC----
-----------CTTTTGTCCAATAATTCTCCCTTGGCTGGCTGCTTCCTCTGCTACTTGGCTTGTCCTCTCCGATCTCCT
CTGTCCTCTGTCATCCTCTCTTCTTCCTCGCGACACCCGATCAGATGGAAATGTCTTTGGCTGACTGCTGGGGCTCTGCC
CCCGCCTCCCCTATTGGGTTTGAGGGCTACGAGAAGCGCCTGGAGATAACTTTCTCCGACGCGCCTGTCTTTGCGGACCC
GTGCGGCCGCGGCCTTCGTGCCCTCTCTCGCCAGCAGATCGACTCCTTCCTCGACCTTGCACGGTGCACCATTGTGTCCC
AGCTCTTGAACAAGCAGTTCGACTCTTACGTGCTCTCGGAGTCGAGCCTCTTTGTGTACTCCCACAAGGTTGTCATCAAA
ACCTGTGGAACAACAAAGCTCCTGCTGTCGATTCCCCGCATCCTCGAGCTTGCTGCGGAGCTGTCGCTGCCACTTCTTTC
AGCGAAGTACTCCCGCGGGACGTTCATCTTCCCTGGCGCGCAGCCGGCGCCGCACCGCAGCTTCTCGGAGGAGGTGTCCG
TGCTGAACGGCTTCTTTGGTGGCCTCAAGTCAGGTGGCAATGCATATGTGATGGGTGACGCGTTCAGGCCCAAGAAGATG
TGGCACGTCTACTATGCCACGGAGGAGCCTGAGCAGCCCATGGTCACACTCGAGATGTGCATGACTGGGCTGGACGCCGG
GAAGGCCGCGGTGTTCTTCAAGAACTCTGCCAACGGCGGCTGCTCCTCGGCCAAGGAGATGACCAAGGTCTCGGGGATCT
CTGCTATCATCCCCGAGATGGAGATCTGCGACTTCGACTTCGACCCGTGCGGCTACTCGATGAACGGCGTCTGCGGCCCC
GCAGCCTCCACGATCCACGTCACTCCTGAGGAGGGCTTCAGCTACGCGAGCTATGAAGCGATGAACTTCAACCCTGGCTC
CCTGGTCTACAGTGACCTGATCGAGAGGGTGCTGTCGTGCTTCCGCCCGTCAGACTTCTCCGTCGCCGTCACCATCTTCG
GTGGCCACGGCTTCGCCAAATCATGGGCGGGCGGTGCGGAGGCTGGCTCCTCCTACGTGCTCGAGGATGTCGTCGAGCAG
GAGCTTCCGGGAGGTGGCCTGCTCATGTACCAGAGCTTCAGTGCGGTTGCCCCTGGCGCCGTGTCGCCGAGGTCGACCTT
GGATGATGGCTGGAGCAGCGACGGGATGGAGGCGGCCGCGCAGGGCGAGGACACGTGCATCTGGGGAGTGGAGAAGAAGG
TGGCCGTGAAAGGTGTCGCTGCTGCCTGAAGAGAAGTCTGCGGTTCCAGAGACGTCTGAAGTCTCTGAGATGGTGTCCTG
CTATGGTAGTTTCGGTTAAGCAGCTGGCCGGGTGACCGGCAAAGCCTACTGTATCCCGTCTTACTGCTTTT-ATTATTTT
TCTGTCATCGTTCCTGCCGAATAAGTTGCTCTAGATGGTCTGCTGCGTCTGCCATA--GTGAGCAAAAGAGTCTGTTGTG
GGGAGAATGTAATAAATATTTATGTCTGTCGCCAATACTCTTATGGGGAGAATGATATTGTAACTCATACTACCTCCGTC
CCATAATATAAGATTGTATTTGACACTATGTTCAATCAAATATTGGAGTTCTCCGTTAATCTTGTCCAACATTCGAGTTG
TGTTTGAATGATATTGTAACCAGGCTTCTTATTTG-T----TGTCAGTCTTCTGCAT-------------------TGTC
CAAAAGAGAAGCCAAAGAAAATTGTACTGTGGTCAATTTTCTA-TGAATTAGTTGGTTCCTGCTGGTTTATATGCCATGT
CAGAGTAGCTCTGCTGAATTGAGTTTACCACTTTCTGTCTTTCTTTATGACATGCTGGCGTCTTCCCTTCGTCTCCTACA
CGTGCCTAAAACTATCACTGAACTGAA-ATACATGGAACACTAG-TAACTGGACTAGAACCCACCGAACTGATTTTTGTC
ACTTCCATACGTATTTAAAAGATTACCAGTGTAGCTGGTCAACACTTGAACTGAAATACTCCCTCCGTACATGGATACAT
AGCACTGTCTGATTTCCAGTGAAAAGATTACCGGACACAAACTCTAAAGATTCTCAAAGAAATTGTGCATC-AAGGCACC
AGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCATCT-----------
--------------------------------------------------------------------------------
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-----------------------------------------
>chr2A_1052
--------------------------------------------------------------------------------
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---------------GGGTTTGAGGGCTACGAGAAGCGCCTCGAGATCACCTTCTCCGAGGCATCAATCTTTGCCGACCC
TCATGGTCGTGGCCTGCGCGCCCTCTCCAGGGCCCAGATTGACTCTGTTCTTGATCTTGCACGGTGCACCATTGTGTCCG
AGCTCTCCAACAAGGACTTCGACTCCTATGTGCTATCTGAGTCGAGCCTGTTCATCTACTCTCAGAAGATTGTGATCAAG
ACCTGTGGGACTACCATGCTCCTGCTCACCATTCCTAGGATTCTTGAGCTTGCTGAAGAGCTGTGCATGCCGCTTGCTGC
CGTGAAGTACTCTCGTGGGATGTTCATCTTCCCCGGCGCACAGCCTGCTCCCCACAGGAGCTTCTCTGAGGAGGTTGATG
TCCTGAACCGCTACTTCGGCCACCTGAAGTCTGGCGGCAATGCTTATGTGATCGGAGACCCAGCGAAGCCTGGCCAGAAG
TGGCACATCTACTATGCCACCGAGCAACCTGAGCAGCCCATGGTCACCCTGGAGATGTGCATGACTGGGCTGGACAAGAA
GAAGGCCTCTGTCTTCTTCAAGACTCAAGCTGATAGCCACGTTTCCTGCGCCAAGGAGATGACCAAGCTCTCTGGTATCT
CCGACATCATTCCCGAGATGGAGGTCTGTGACTTCGACTTCGAGCCCTGCGGCTACTCCATGAACGCCATCAACGGATCT
GCCGTCTCCACCATCCATGTGACCCCCGAGGACGGCTTCAGCTATGCGAGCTACGAGGTCATGGGCATGGACGCCTCCGC
CCTGGCCTACGGCGACATCGTCAAGAGGGTCCTCCGGTGCTTTGGCCCTTCAGAGTTCTCTGCGGCGGTCACCATCTTTG
GTGGCC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr5A_2135
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TGGGGAGTGG---AGAAGG
TGGCCGAGAAAGGTGTCGCTGCCTG----AGAGAAATCTGCGGTTCCAAAGACATCTGAAGTCTCTGAGATGGTGTCCGG
C---------------------------------------AAAGCCTACTGTATCTGGTGTTACTGCTTTTTATT---TT
TCTGTCATCGTTCCTGCCGAATAAG-TGCTCTAGATGGTCTGCTGCGTCTGCCATA--GTGAGCAAAAGAGTCTATCTAG
GTTGGTAG----TAACTATTCATGTCTGTCGTCAATGCTCTTGTGGGGAGGATGATATTGCAATTT--------------
-------------------------CTATGTTCAATCAAATGTTCGAGTTCTCTGTTAATCTTGTCC-------------
------------------------------ATGTA-T----TGTCAGTCTTCTGCATACATTGTACTG-ATAATATTGTC
CAGAGGAGAAGCCAAAGAAAATTGTACTGTGGTCAATTTTCCC-TGAATTAGTTGGTTTATGCTGGTTTATGTGCCATGT
CAGAGTAGCTCTGCTGAATTGAGTTTACCACTTTCTGTCTTTCTTTCTGACACGCTGGCATCTTCCCTACGTCTTCTACA
CGTGCCTAGAACTATCACGGAATTGAACATACATGGAACACTAGATAACTGGACTAGAACCCAC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>chr4B_2182
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------TCCAGAGACGTCTGAAGTCTCTGAGATGGTGTCCTG
CTATGGTAGTTTCGATTAAGCAGCTGGCCGAGTGACCGTCAAAGCCTACTATATCTGGTGTTACTGCTTTTTATT---TT
TCTATCATCGTTCCTGCTGACTAAG-TGCTCTAGATGCTCTGCTGCATCTGCCATA--GTGAGCAAAAGAGTCT------
---------------------------GTTGCCAATGCTCTTGTGGGGAGGATGATATTGCAACTT--------------
-------------------------CTATGTTCAGTCAAATGTTCGAGTTCTCTGTTAATCTTGTCC-------------
------------------------------ATGTA-T----TGTCACTCTTCTGCATACATTGTACTAAATAATATTTTC
CAGAAGAGAAGCCAAAGAAAATTGTACTGTGGTCAATTTTCCC-TGAATTAGTTGGTTTCTGCTGGTTTATGTACCATGT
CAGAGTAGCTCCGCTGAATCGAGTTTACCACTTAATGTCTTTCTTTATGACACGCTGGCATCTTCCGTACGTCTTCTACA
CGTGCGTAGAACTATCACTGAACTGAACATACATGGAACACTAGATAACTGGACTAGAACCCAC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>SNPs
----------------S----------------S-------------------------S--------------------
----------------------------------------------------SS-----------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S-----S--------
--------------------------------------------------------------------------------
----------------------------------------------------------------S--S------------
----------------------------------S----------S----S-----------------SS--SSSSSSSS
SSS------------------------------------------------------------S----------------
--------------------------------------------------S-----------------S-----------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
-------------------------------------------------------S---------------------S--
--------------S-----------S---S------------------------------S------------------
-----------------------------------------------------SS-------------------------
-------------------------------------------S------------------------------------
--------------------------------S-----------------------------------------------
-----S--------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------S-----------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S--------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------S-----------------------------------------------------------
-------------------------------------------------------------S------------------
---------------------------------S------------------S---------------------------
--------S--------------------------------------------------------S--------------
---------------------S----------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S----------------S-------------------------------------------------------------
---------------S----------------------------------------------------------------
---------------------------------------------------SS--------S------------------
--------------------------------S--S-----------------------------S--SSS---------
--------------------S--------------------S--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-----S---------S----SS-----------------------S--------------------------S-------
-------SS--S------------S------S--SSSSS-S-SSS-SS---------------S-S-----S--S-----
-----------------S--------------S------------------------------------SS--S------
-------------S-----SSSSSS----SS-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1393
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TCCTCTCTTCTTCCTCGCGG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>reverse_2373
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------GTACCTGCTCGAGGATGTCG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>forward_2181
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CAGCCTCCACAATCCACGTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
>reverse_3618
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------TCTCTGGGACTGGGTCTCTG-------------------------------------------
-----------------------------------------
