>input_sequence_58398
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-------------------------------------------------GAATAAAAAAGTGCAGTTAACTTGGCGTGAG
GTTTGCAGCACCTAACGAGGCCTACCGGCCACTCCGCTCTACCCGGCCTTGAGGCAGAGGCACTACAACCAACTTGAACT
CATACGTGCAACTACCCCACCTTTACATCCACATAAACCACCATAACCACCTCCATTCTTTGACTGCCTTCCCTTGCACT
CCACACTTCCTCTCTCTCCTCCTCATCATCCATCTCTCTATATACTCACCGCACCGAGCGACCAAACCGAGCCACTCACC
GCACTCTTTCCCGCCTCGCCTCCCGAGACCACTCCAGAATGACATCGATGATCAGCACGGACGACGCTGCTGCGACGAGC
CATGTCGACGCTCCAGTTCAAGGTAAGAGCGTGGATTTTCTGCACCTTCTC----GCACCCTTCTCT----TGTGCACCC
AACGGATCGACGTAATTCTGTCTGGTGCGCGCGTGCGTGCATGCAGTTGCGACGAGAGATCACGGGGAGGCGGCGGATGT
CGACGGCAAGGGCGCCGCGTCCGCGGAAGAACAGGAGCAGGCGGCGGCGAGGCGCGACGTCTTCCTGCTGGCCGGGATCA
GGAAGCTCATCAAGAGCTTCAGGAGCCTGTCCCACATCTTCGAGCTGTACAAGGACGAGGAGGACGAGGACGACGACATC
CAGATCGGGTTCCCTACGGACGTGGAGCACGTGGCCCACATCGGGCTGGACGGCTCCAGCAGCGTCGCCAGCCTCAGGGG
GATGGACGGCGCCAGGGAGCTGCTCTCCCTCTCCACCAACATCTCCCTCCAGCAGTTCGAGTTCGCCATGGCCTCCATCG
CCGCGCATGACGACCGCAGCGCCGCCATAGCAGCTAGCCCGTAAT---TATTTACAGTGCTTAATTAATAACTGGGCCAC
AACTCGCGCCGTGGACGTACG----ACTAGTTCTTCTGC-----CCCTGTACTTGGCGCTGTCTAGCCTACATGCTATTC
CCA-TTCCTGGCCAATGCTGGCAGCCTCTACGCCAAAACAGGGATTGGCAGA------------------------TGGT
GTATATAATGTCACCTATGGATATTTTTGTAATTTGAGACACCAACTGCTTTGGTATGGAACGTGAATGTACGTGGTATG
TCACGTACGGAGATCTCAACTATTTGTGTGTGTGTGCGCGCGCGCCAAAAACAGCTTCCTTAGGCTGGTCATA-------
--------------------------------------------------------------------------------
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----------------------
>chr3B_1_TraesCS3B01G461500
TTCAGCGGCTTCATTACTCCCTTATATGCTTCCAAGGGCCTATTCTCTACCAAATCCGATGTGCTCATCTTAGTATTTTA
ATTCTTAAGATCCTTAGCAGGATAAGAAAGTATGGTAGCCTAGAGCGGACGCTGACCTCTCACTGGCACCAACATTGAAG
CGTCACGGGTCTTGAACTCCACCGCCGTTCATGCAGACGCCAGATGGAGCACGTGGTCGCCGAGGCGGAATACAAAGAAA
GTGGACGACGGCCGCCCATAGGATAGGTTTAGGGTCGGGCCGCTTTTTGTCCTAAATATTCAAAATGTAATGAAAAATGT
TCGAAATGTAATGAACTTCGTCTAGTTTATATGAAAATTTATTGTATTTGTATGAATTCCGTCCGGTTAGTTGAAACCCG
GCTTGAAATGTATGCAGGCAGCAGCGTTGGATGGCTGCCTCTCGCACCCATGTCCGCGGACGGATGCCGGAGCAAATTTA
CGGATTGGCGTTGGAAATGCCCTTAGATCATTAAAATAGCGATCTAAAAGATTTTATATTTCTTTAGGGAGAGAGTATAA
TGCATAACATGGCATTTTTGCGTGCTTCCATTCAGCTTGTCCCATAGTTTTGAGCCACAGATGGAGAGAGGCCAAAACTG
ATGCAATCTACCGAGCGTCTCCTGTCTACTGTACTGAATGGACGTGGATCCTCTGACTTTACAATCCCTGCCATACCCTG
CCTTTGTGTCACTGACAGGTGGGCCCCATGCTCCGTAGGACCCATGTGTCAGTGACTCAAAGGTAGGCTTGGCCACGGCA
GGGGATCCTCGTCCGTACTGAATACATGGGCAGAGTGACAA-CCCCAGCAGTGCAGCAGACTTGTAC-TA-------GCA
TCGTGCCATCCCTGGACCTCATGTCGCGGACTCACACCAAGCCCTGCAATAAATTATTCAGACTAAGAACTGAACAAACT
GAAGGTAACTGAAACTAAATAAAGACAAAAGTGCAGTTAACTTTTTTTTGAATAAAAAAGTGCAGTTAACTTGGCGTGAG
GTTTGCAGCACCTAACGAGGCCTACCGGCCACTCCGCTCTACCCGGCCTTGAGGCAGAGGCACTACAACCAACTTGAACT
CATACGTGCAACTACCCCACCTTTACATCCACATAAACCACCATAACCACCTCCATTCTTTGACTGCCTTCCCTTGCACT
CCACACTTCCTCTCTCTCCTCCTCATCATCCATCTCTCTATATACTCACCGCACCGAGCGACCAAACCGAGCCACTCACC
GCACTCTTTCCCGCCTCGCCTCCCGAGACCACTCCAGAATGACATCGATGATCAGCACGGACGACGCTGCTGCGACGAGC
CATGTCGACGCTCCAGTTCAAGGTAAGAGCGTGGATTTTCTGCACCTTCTC----GCACCCTTCTCT----TGTGCACCC
AACGGATCGACGTAATTCTGTCTGGTGCGCGCGTGCGTGCATGCAGTTGCGACGAGAGATCACGGGGAGGCGGCGGATGT
CGACGGCAAGGGCGCCGCGTCCGCGGAAGAACAGGAGCAGGCGGCGGCGAGGCGCGACGTCTTCCTGCTGGCCGGGATCA
GGAAGCTCATCAAGAGCTTCAGGAGCCTGTCCCACATCTTCGAGCTGTACAAGGACGAGGAGGACGAGGACGACGACATC
CAGATCGGGTTCCCTACGGACGTGGAGCACGTGGCCCACATCGGGCTGGACGGCTCCAGCAGCGTCGCCAGCCTCAGGGG
GATGGACGGCGCCAGGGAGCTGCTCTCCCTCTCCACCAACATCTCCCTCCAGCAGTTCGAGTTCGCCATGGCCTCCATCG
CCGCGCATGACGACCGCAGCGCCGCCATAGCAGCTAGCCCGTAAT---TATTTACAGTGCTTAATTAATAACTGGGCCAC
AACTCGCGCCGTGGACGTACG----ACTAGTTCTTCTGC-----CCCTGTACTTGGCGCTGTCTAGCCTACATGCTATTC
CCA-TTCCTGGCCAATGCTGGCAGCCTCTACGCCAAAACAGGGATTGGCAGA------------------------TGGT
GTATATAATGTCACCTATGGATATTTTTGTAATTTGAGACACCAACTGCTTTGGTATGGAACGTGAATGTACGTGGTATG
TCACGTACGGAGATCTCAACTATTTGTGTGTGTGTGCGCGCGCGCCAAAAACAGCTTCCTTAGGCTGGTCATAATAAAAG
TATCATAGGCATGCAGTATCATAAATTTAACTAGGCATTTTTGCTGAGGTGGCACAATTTGATGTGCAAAGAGAGGATTA
AGTGTCATGATATGATATCGTATCATATTGAATGATGCAGTAGTACGTGTCATACATAACAATAAATGGGGTCACTATGA
TACCAAGTTATGATACTATGCACTATATGATACTTCCTCCGTTCCTAAATATATGACGTTTTGGTAGTTCAAGTACCGCC
TTAGCTCAACCTTGCTTTTTTAGGAACAGTTTTACTTAACAACATTTTTGGGACAAAACGTGGGATTCCCAAAACGTGAT
ATGTTTCTTACAAAACCGGATTCTCCCTAGCACAGATTACTGCGAACTAGCAAAAGGGCCAGTGCTTTGCAATGGCAGGG
AAAAAA-ATCATAATCTTCAATAACCATGATCACATTTTGCTGCATCACTGAGATACACTGTCACTCTCAATTTCGTGAA
ACTATGAAC--TTTTTTTAAA-----------------ACTCATGAATATTTTTCAAATTCATGAACAC-GTTTACAAAT
TTTCAAACATTTTCTAAAATAAAGAATA-TTTTCTGAATTCATGAACATTTTACACTATTTGCAACATTTT----T---A
AAATATTATGAACATTTTTT-AACAACTTTCTTGAATCGGCGAACATTCCTAGAATGGACGAACG--TTGTTTTGGAAAT
TGGTGGAACATTTTTTGT---------------------TTTAAAAAACAT-TTTTGAAATGGATGATCAT--TTTTTAG
ATCAGCGAACATTTTATGAATGAAAAAACTATTTTGTAATGCACGA--ACAGTTTTTGAATTTTTAGGATATTTTTCCAT
TCATGAACATTCTTTGAATTGGCGAAA-TTTTATTCAATTT-AATTAAAAAA-----A-TTAATAAAC-GATTTTTTTAA
TCATGAACATTTTTTGATTTCCGGAA-CATTTGTTTTCAAATTTTTGAACATTTTTTGAATAAGCAAGCATTCTCTTAT-
AAATCCTGAATATTTTTTGAAT
>chr3A_568
--------------------------------------------------------------------------------
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-------CATGACTTTTTTGCGGGCATCCACTCAGCTTATCCCAG----TTGAGCCACGAATGGAGAGAGGCCAAAAACG
ATGCAATCTACCGAGCGTCTCCTGTC------------------------------------------------------
--------------------------------------------------------------------------------
---------------TACTGAATACATGGGCAGAGTGACAA-CCCCAGCAGTGCAGCAAACCTGTACTTA-------GCA
TGGTGGCATCCCAGGACCTTATGTCGCTGACTCACGCCAAGCCCTGCACTAAATTATTCAGACTAAGAACTGAACAAACT
GAATCTAACTGAAACTAAATAAAGAC-----------------------------AAAAGTGCAGTTAACTTGGCGTGAG
GTTTGCAGCACCTAACGAGGCCTACCAGCCACTCCGCTCTACCCGGTCTCGAGGCAGAGGCACTACAACCAACTTGAACT
CATACGTGCAACTACCCCACCTTTACATCCACATAAACCACCATAACCACCTCCATTCTTTGACTGCCTTCCCTTGCACT
CCACACATCCTCTCTCTATATAACAAAGACCAGAC-------------------------ACCAAACTGAGGCACCCACG
GCACACTTTCCCGCCTCGCCTCCTGAGAGCACTCCAGAATGACATCGATGATCAGCACGGACCATGGTGCTGCGACGAGC
CATGTCGACGCTCCACTCCCAGGTA-GAGTGTGGATCTTTTGTACCTTCTCTCTCGCACAATTCTCTCGATCGTGCGCCC
AAAGGATCGACATGATTCTGTCTGGTGCGCGCGTGCGTGCATGCAGTTACGACGAGGGATCACGGGGAGGCGGCGGATGT
CGCCGGCAAGGGCGCCGCGTCCGCGGAAGAACAGGAGCAGGCGGCGGCGAGGCGCGACGTCTTCCTGCTGGCCGGGATCA
GGAAGCTCATCAAGAGCTTCAGGAGCCTGTCCCACATCTTCGAGATGTACAAGGACGAAGAGGAGGAGGACGACGACATC
CAGATCGGGTTCCCGACGGACGTGGAGCACGTGGCCCACATCGGGCTGGACGGCTCCAGCAGCGTCGCCAGCCTCAGGGG
GATGGACGGGGCCAGGGAGCTGCTCTCCCTCTCCACCAACATCTCCCTTCAGCAGTTCGAGTTCGCCATGGCATCCATCG
CCGCGCATGACGACCGCAGCGCCGCCATAGCAGCTAGCCCGTAATAATTATTTACAGTGCTTAATTAATAACTGGGCCAC
AACTCGCGCCGCGCACGTACGTTCTACTAGTTCTTCTAT-----CCCAC----TGGCGCTGTGTAGCCTACATGCTCTTC
CCCGTTCCAGGCCAATGCTGGCAGCCACTACGCCAAAACAGCGATTGGCAGA------------------------TGGT
GTATATAATGTCACCTATGGAAATTTTTGTAATTTGAGACGCCAACTGCTTTGGTGTGGGACGTGAATGTACATGGTGTG
TCACGCACGGAGATCTCGACCATTT-------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>chr3D_816
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---------------TACTGAATACATGGGCAGAGTGACAAACCCCAGCAGTGCAGCAGACTTGTACTAGCATCGTGGCA
TGGTGCCATCCCAGGACCTCATGTCGCTGACTCACACCAAGCCGTGCACTAAATTATTGAGACTAAGAACTGAACAAACT
GAATCTAACTGAAACTAAATAAAGAC-----------------------------AAAAGTGCAGTTAACTTGGCGTGAG
GTTTGCAGCACCTAACGAGGCCTACCAGCCACTCCGCTCTACCCGGCCTTGAGGCAGAGGCACTACAACCAACTTGAACT
CATACGTGCAACTATCCCACCTTTACATCCACATAAACCACCATAACCACCTCCATTCTTTGACTGCCTTCCCTTGCACT
CCACACTTCCTCTCTCTATATAACA-AGACCAGAC-------------------------ACCAAACTGAGGCACCCACG
GCACTCTTTCCCGCCGCGCCTCCTGAGAGCACTCCAGAATGACATCGATGATCAGCACGGACGATGCTGCTGCGACAAGC
CATGTCGACGCTCCAGTTCCAGGTAACAGTGTGGATCTTTTGTACCTTCTCTCTCGCACAATTCTCT----CGTGCGCCC
AAAGGATCGACATGATTCTGTCTGGTGCGTGCATGCATGCATGCAGTTACGACGAGGGATCACGGGGAGGCGGCGGGTGT
CGCCGGCAAGGGCGCCGCGTCCGCGGAAGAGCAGGAGCAGGCGGCGGCGAGGCGCGACGTCTTCCTGCTGGCCGGGATCA
GGAAGCTCATCAAGAGCTTCAGGAGCCTGTCCCACATCTTCGAGCTGTACAAGGACGAGGAGGAGGAGGACGACGACATC
CAGATCGGGTTCCCTACGGACGTGGAGCACGTGGCCCACATCGGGCTGGACGGCTCCAGCAGCGTCGCCAGCCTCAGGGG
GATGGACGGGGCCAGGGAGCTCCTCTCCCTCTCCACCAACATCTCCCTCCAGCAGTTCGAGTTCGCCATGGCCTCCATCG
CCGCGCATGACGACCGCAGCGCCGCCATAGCAGCTAGCCCGTAAT---TATTTACAGTACTTAATTAATAACTGGGCCAC
AACTCGCGCCGCGCACGTACGTTCTACCAGTTCTTCTACGGACCCCCAC----GGGCGCTGTCTAGCCTACATGCTCTTC
CCG-TTTCTGGCCAATGCTGGCAGTCGCTACCTCAAAACAGGGATTGGCAGATGGTGGTTTACAATGGTTGCCCCGTGGT
GTATATAATGTCACCAGTGGATATTTTTGTAATTTCAGACGCCAACTGCTTTGGTGTGGGACGTGAATGTACATGGTATG
TCACGCACGGAGATCTCAACCATTT-------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>chr7A_2551
--------------------------------------------------------------------------------
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--------------------------------------------AACTAGAAAAAGGGCCCGTGCATTGCAACGGAAGA-
AAAAAA-ATCATAATCTCCAATGGCCATGATCACATTTTGCTGCATCATCGAGATACACTAACACTCTCAATTTCGTGAA
ATCATGAAC--TTTTTTTAAATTCATGAACATATTTGAAATCGTGAACATTTTTAAAATTCATGAACAC-ATTTACAAAT
TTTCAAACATTTTCTAAAATCAAGAACA-TTTTTTGAATTCATGAACATCTAATACTATTTGCAAACATTTTCTAA---A
ATTTGTGG-ACATT-TTTTT-AACAATTTTCTTAAATCAACAAACATTTCTAAAATGGACAAACA--TATTTTTGGAAAT
TGGTGGAACAATTTTTGA---------------------TTTAATAAACATTTTTGAAAATGCATGATCAG--TTTTTGA
ATCGGCGAACATTTTATGAATGAATAAAATATTTTGTAAGTCACGAT-----TTTTTTAATTTATAGCATATTTTTCAAT
TCATGAACATTTTTTGAATTGGCGAAA-TCTTGTTCAATCT-CATGAACATTTTTTAA-TACGCAGAC-TTTTAAAAAAA
TCATGAACATTTTTCGATCTCTCAAA-CATTTGTTTTCAAAAAATTGAATTTTTTTCGAATAAGCAAACAGTCTTTAT--
----------------------
>chr1D_2551
--------------------------------------------------------------------------------
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--------------------------------------------AACTAGCAAAAGGGTCTGTGTGTTGCAACG----A-
AAAAAA-ATCATAAACTTCAATGGCCATGATCACATTTTGCTG----ACCGAGATACACTCTCACTCTCAATTTCGTGAA
ATCAT---------------------------------------AAACATTTTTCAAATTTGTGATCTC-TTTTACAAAT
TTTCGAACATTTTCT----TCAAGAATA-TATTTTGAATTCATGAATATTTTATACTATTTGGAAACATTG----TTTTA
AATTGTGA-ACATT-GTTTA-AACAATTTTCTTGGATCGGGGAACCTTTCTAGAATTGGCGACCATTTTTTTTTGGAAAT
TGGTGGAACAATTTTTTTAATTC--------------------ACGAACATTTTTTGAAATGCATGATCAT--TTTTTAC
ATCAGCAAACATTTTATGAATGAATAAACTATTTTGTAAGTCACAA--ACTGTTTTTGAATTTTTAGGATATTTTTCCAT
TCATGAACATATTTTGAATTGGCGAAT-TTTTTTTCAATTT-CATTAACATTT--TTAATACACAAAC---TTTTAAAAA
TCATGAACATTTTTTGATTTTTCTGAGCATTTGTTTTCAAAATTTCGAATATATTTTAAATAAGCAACA--TTTTTTACA
AAATCGCGAACATTTTTTGAAT
>chr1D_2551
--------------------------------------------------------------------------------
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--------------------------------------------AACTAGCAAAAGGGCCCGTGCGTTGCAACGGGAGA-
AAAAAA-ATTATAATCTCCAATGGCCATGACCACATTTTGCTGCATCAGCGAGATACAGTATCACTCTCAATTTCGAGAA
ATCATGACA--TCTTTTTAAACTCGTGCACATATTTGAAATCGTAAACATTTTTCAAATTTGTGAACAC-TTTTACAAAT
TTTCAAACATTTTCTAAAATCAAGAACA-TTATTTG-ATTCATGAACATTTTATACTATTTTAAACTTCTT----TTTAA
AAGTGTCA-ACATTTTTTTA-AACAATTTTCTTGATTCGGTGAACATTCCTAGAATCGATGAACA--TTATTTTGTAAAT
TGGTGGAACAATTTTTGAAATCC--------------------ATGAACATTTTCTGGAATGCAGCATGGCCATTTTTGA
ACCAACGAACATTTAATGAACGAATAAACTATTTTGTAAGTCACGA--ACAGTTTTTAAGTTTTAAGGATATTTTTCCAT
TCATAAACATTTTTTGAATTGGCAAAG-TTCTATTCAATTT-CATTACAATTTTTTAA-TAAACGAAC-TTTTTTAAAAA
TCATGAACATTTGTTT----------------------------------------------------------------
----------------------
>chr1B_2552
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---------------------------------------------ACTACCAAAAGGGTCCGTGCATTGCAACAGGAGAA
AAAA-ATATCATAATCTGCAATGGCCATGACTACATTTTACTGGATCACCGAGATACGCCATCACCCACAATTTCGTGAC
ATCATGAACATTTGTTTTGAGCACATGCACATATTTGAAATCATGAAC-TTTATCAAATTCATGAACACTTTTTACAAAT
TTTCGAACATTTTCTAAAATCAAGAACA-TTTTTTGAAATCATAAACATTTTATACTATTTGCAAATATTTTCTTA--GA
AATTGTGA-ACATTTTTTCA-AACAATTCTCTTGAATAGGCGAACATTTCTAGAATCGAAGAACA--TTTTTTTGGAAAT
GGGTGGAACAATTTTTGAAATTC--------------------ATGAACATTTTTTGAAATGCAAGATCAT--TTTTTGA
ATCAGCAAACATTTTTTGAATGAATAAACTATTTTGTAAGTCACGA--ACAATTTTTTAATTTTTAGGATATTTTTCCAT
TCATGAACACTTTTTGAATTGGTGAAA-TTTTGTGAAATTG-CATTAATATTTTTTTAATACCCTAAC---TTTTAAGAA
TCATGAACATTTTTTTATTTCCTGAAT-A-TTTTTTTCAAAATTTCGAACATTTTTTGAATAATCAAACATTT--TTATA
AGATCTTATACATTTATTGAAT
>chr1A_2552
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---------------------------------------------ACTAGCAAAAGGGCCCGTGCGTTGCAACGGAAGAA
AAAA-A-ATCATAACCTCCAATGGCCATGATCACATTTTGTTGCATCACCGAGATACACTATCACTCTCAATTTTGTGAA
CTTGTGAATA-ATTTTTTTAACTAGCGAACATATTTGAAATCATGAACATTTTTTAAATTCATGAACAC-TTTAACAAAT
ATTCAAATATTTTCTAAAATCAAGAACA-TTTTCTGAATTCATGAACATTTTATACTACTCACAAACATTT----A---A
AAAAATGA-GCATTGTTTTT-AACAATTTTCTTGAATCGGCGAACATTTCTAGAATAGACGAACA--TTGTTTTGAAAAT
TGATAGAACCATTTTTAAAATTC--------------------ACGAACATTTTTTGAAATGCATGATCAT--TTTTTGA
ATCATCAAACATTTTGTGAATGAATAAACTATTTTGTAAGTCATGA--AAA---TTTGAATTTTTAGGATATTTTTCCAT
TCATGAT--TTTTTTGAATTGGTGAAT-TTTT--TCAATTT-CATTAA--------------------------------
--------------------------------------------------------------------------------
----------------------
>chr6D_2552
--------------------------------------------------------------------------------
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---------------------------------------------ACTAGCAAAAGGGCCCGTGCATTCCAACGGGAATA
CAAA-AAA----AATCTTCAATAGCCATGATCACATTTTGCTTCATCACGGAGATACACTATCACTCCCAATTTCATGAA
ATAATGAATG-TTGTTCTAAACTTGTGATCCTATTTGAAATCGTGAACATTTTTTAAATTGCTGAACAC-TTTGAAAAAA
AT---------------------GAACATTTTTTGA-ATTCATGCACATTTTATTCTATTTGCAAATATTTTTTGA--AA
AAATGTGT-ACATTTGTTTTTACATTTTTG---GAATCGGTGAACATTTCTAGAATGGACGACCA--TTGTTCTGGAAAT
TGGTGGAACAAATTTTGTAATTC--------------------ACGAACATTTTTTGATTTAACAGA-CAT--TTTTTGA
ATCAACGAACATTTTATGAATGAATAAACTACTTTGTAAGTCACGA--ATAGTTTTAAAAG-TTTAGGATATTTTTCCAT
TCATGAACATTTTTTGAATTGGCGAAACTTTG--TTAATTT-CATTAAAAAA---TAA-TACGCAATCATTTTGAAAAAA
ATATGAACATTTTTTTATTTCCCGAG-CA-TTGTTTTTAAAATTTTGAACATTTTTAATAAG------------------
----------------------
>chr2D_2587
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AA
AATA-A-ATCATAATCTCCAAGGACCATGATCACATTTTACTGCATCACCGAGATACATTATCACTCTCAATTCCATGAA
ATCACGAACATTT--------------------TTTAAACTCGTGAACATTTTTC-AATTCATGTACAC-TTTTACAAAT
TTTCGACCATTTTCTAAAATCAAGAACA-TTTTTGA-ATTTGTGAACATTTTATACTATTTGCAAACATTTTCTTA---A
AATTGTGA-ACATTTTTTTA-ACATTTTTTCTTGAATCGGCGAACATTTTTAGAATCGACAAACA--TTGTTTTGGAAAT
TGGTGGAACAAAATTTGAAATTC--------------------ATGAACATTTTTGTAAATGCATGATCAT--TTTTTGA
ATCAGCTGACATTTTATGAATGAAGAGACTATTTTGTAAGTCATGA--A--GTTTTAGAATTTTTAGGATATTTTTCCAT
TCATGAACATATTTTGAATTGGTAAAA-TTTTGTTCAATTT-CATTAAAATTTTCTAA-TACATGAAC-TTTTTAAAAAA
TAATGAATATTTTTTATTCCCCAG-A-CATTTGTTTTCAAAATTTTGAATATTTTTTGAATAAGCAAACATTTTTTTATA
AAATCGTGAATATTATTTGAAT
>chr4D_2664
AAACT---------------------------------------------------------------------------
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-----------------------CATGAACATATTTGAAATCATGATCATTTTTCAAATTCGTGAACGC-TTTTACAAAT
TTTTGAATATTTTCTATAATCAAGAACATTTTTTGA-ATTCATGAACATTTTATACTATTTTCAAAATAAA----A--AT
AAAAATGT-GAATGTTTTTA-AACATTTTTCTTGGTCGGCAAAC------------------------ATTTTTTGGAAA
TTGTGGAACAATTTTTTAAATTCATGAATATTTTTTTGATTTAACGAACATTCTTTGAAATGCATGATCAT--TTTTTGA
ATCAGCGAACAATTTATGAATGAATAAAATATTTTCTAAGTCACGAAGA--GTTTTTGAATTTTTAGGATATTTTTCCAT
TCATGAACATTTTTTGAATTGGCGAAA-TTTTGTTCAATTTTCATTAACATTGTTCAA-TACACAAAC-TTTTTAAAAAA
TCATGA-----TTTTTATTTCCCAAA-ATTTTGTTTTCAAAATTTCGAACATTTGTTGAATAAGCAAATG-TTTTTTATA
AAATCACGAACATTTTTTGAAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS----S-S--------S--S----S-------S-----SSSSS---------SS-----------------SS-
--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----------------------------------------------------------------
-S----------S--------------S--------------------S-------------------------------
---SS---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------SSSSSS--SSSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S---S---S---S
-----------------------S----S-----------------------------------S---------------
-------------------S---------S------S--S--S----------------SS----------S----S---
--S--------S-S----------------------------------S-------S-----------------------
--S-----------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-S-----------------------S---------SSSSSS-----------------------S---
--S-----------------------S-----------------------------------------------------
----------------------------------------S--------------S---S------------S-------
-----S--------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S----S------S--S--SS
-------------------------------------------------S----------S-------------------
-S---------------------------------------------S----------------------S---------
--------------------S--------------------------------S--------------------------
------S-S---SS------------S-------------------------------------S---------------
----------S---------------------------------S-----------------S----------------S
------------------------S--------------SS---------------------------------------
-----------S------------------------------S-----------------S--------SS----SSS--
----------------------S------------------S-------------------------S------S-----
-----S----------------
>forward_586
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------ACATGGCATTTTTGCGTGCT------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_2275
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GCATTTTTGCTGAGGTGGCA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
