>input_sequence_58317
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--------ACACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT---CTCTCGTCAT-------------------------
-CCCC-----ATTCACCAGCTAGCTTAAGCTAGCTTGCTCTTCTCTGCTGCAAGCTGCTGATCGGTTCTTTGATCTTTCC
GGGAGGGAAGCGCCGGGAGTTGGCTGTTCTGTCAGGCTGGCTCTTGACATGTTCAGATCGAAGGTCCAGGAGATGATCCT
CAGGAGGAGGTCCAGGTCCATGAACGGCGCCG------------C------GCAGCACGCC---GGCAGCTCGCCCACGG
CTTCGTGCGACGGTGGAGGC---GGCAAGGGTGC---------------TGCTGCTCGTGCGCCGTCGTTCGCGGCGCCG
AGGCTGCTGCACTCGTCGTCGCTGCCGGCCGGCGGCCGCGCCGCGGTCGTCAT---CGGGAGCCCCGCGCGGGACCCCGA
GGCGATGTTCGCCTACGCCATGAGCCCCACCTCCGTGCTGGACGCGTCGGCGGCCTTCGGGTCGCCCGGCCCGGCCGTGG
ACGCCGGAGGGGCCAAGCGCCGTCCGTGGTGCGACGGTTGCGCGGGGCCGCACGGGCTCGCCGACGTGCTGGACTGCGCC
CACGAGGCCCAGCGGAGGAAGAACGTCCTCCGGGGCGCTGTGAGGGCGCAGGCGCCGGCCCTGGTGCGGTCGTCCTCCCT
GGACCGGCGCGTGGAGTTCGGCGTCAAGAACAAGAGCTCGTGGCTTCCGCTGCGCGCCGCCCGCGCG---GCGACGGAGG
CGGAGGAGGACGGGCCGTCGTCCGAGGACTACACCTGCGTCATCTCCCGCGGGCCCAACCCGAGGACGGTGCACATCTTC
GGCGACCGCGTCGTGGAGGGCGACCGCGCGCTGGAGAGCCCGCCGCCGGCGCCG------GCGCGCCAGGGCAGAGGCTT
CCTCAGCCTGTGACGCCATGCCCAT--------GCCACCGATAGTAGCAA----TCCTTCCATGA--------TGCGTGC
GTGCGTGCTCCGGTAAAGTAGTAAGTCCTGTTGATGCTGTCAGTATTTTGTTCTTGGATCGATCGATCTCGATGAGATGA
TCAGGCAGATGCCTCTTGGATCAGATGATCAAACAGATTGGGTTTTGTCTGTACTGTAATATATAGGAATTCTATATCTC
TTTGCTGCAACAACATGTTTGTACAAGAGCAAGATCACATCCGAACATGTAAAATTAGTA---GCTTATGAATGAATTGA
TCGTTGAAAATGCACTGG--------------------------------------------------------------
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-----
>chr5A_1_TraesCS5A01G384600
GCTTGCCAGCAGCCACAGACCAAGCCATGCTGGGCAGATCAAGTTCAGGAGCGGATAGACCCCAAACCCCAATGTCGTCA
TTGCCGCCAATGCAGCACCACCAGATGGTGCCCACACCACCTTCGCCGCCAACAAGCAGAGGAGTCACCGTAACTTCGCC
GCCTCACCGCCAATCAAGGTTGTCAGAATCGCGATTCTGTTATACGATTCTACGACTTTACGATCCAAACTAACCCCTCT
GATTCTACGATTTTAGTTCATAGAATCTACGTTTTTACGATCCTGATAGTGAAGATTCTACGATTTGTGATCCTACCATC
AGAGCTCCGATCCGATTCAAAATCGCGATTCTGACAGCCTTGCCGCCAATAGCTTCATCGAAAGAGAACAACTCCGATGC
GATGGAGAAGGCGAGTGGCAGCCATGAGAGGCCCCGCCGCCACCGGCACTGACCAGGCTTCACCCAACAGTGACCCTCGA
CGATGAGGGACGCGGGGTCAGGAGGGGAGGAGGGATAACGCCTCGATTGGTGGTGAGATAGGATCCTGTTTTTCTTTTTA
ATCTTGGGACGCTGAATCTTTCTATTGGAAC------GGGAACAATGATTG-CATCTTGTGTGACCCAGCACCGGCGAAT
TGGCGCATTCTGCTGCACCTCCCGTTGGTCGACAGCAGATCCACCTGCCATTCAT----------CATGGAATCCGTCCT
TGTGTGCATAGCGCT----AATTGGGTACGGTTCGTCGCCACAC--ACATATACACAAACTCACACAACAAGACACAAA-
------------CATGCCAGTGAAAACTGAAAACGATCGCAAACTCTCTTCAATCAGGAAAATAAAAGAAAAGA-AAATA
CTATTGGCAGTAGTAAAACTGAAGATAAGGACATGCAGTTTTGGAAGCAAGCAGAGCACACACAAACCAAACC-----AA
CGATGACATCAGTGGAGTGTGAGGGGGGGAGCCCG------GCCCGGCCCTTCTTTAAGATCACCACCCGCCCCCATTGC
CCTCTCCCACACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT---CTCTCGTCAT-------------------------
-CCCC-----ATTCACCAGCTAGCTTAAGCTAGCTTGCTCTTCTCTGCTGCAAGCTGCTGATCGGTTCTTTGATCTTTCC
GGGAGGGAAGCGCCGGGAGTTGGCTGTTCTGTCAGGCTGGCTCTTGACATGTTCAGATCGAAGGTCCAGGAGATGATCCT
CAGGAGGAGGTCCAGGTCCATGAACGGCGCCG------------C------GCAGCACGCC---GGCAGCTCGCCCACGG
CTTCGTGCGACGGTGGAGGC---GGCAAGGGTGC---------------TGCTGCTCGTGCGCCGTCGTTCGCGGCGCCG
AGGCTGCTGCACTCGTCGTCGCTGCCGGCCGGCGGCCGCGCCGCGGTCGTCAT---CGGGAGCCCCGCGCGGGACCCCGA
GGCGATGTTCGCCTACGCCATGAGCCCCACCTCCGTGCTGGACGCGTCGGCGGCCTTCGGGTCGCCCGGCCCGGCCGTGG
ACGCCGGAGGGGCCAAGCGCCGTCCGTGGTGCGACGGTTGCGCGGGGCCGCACGGGCTCGCCGACGTGCTGGACTGCGCC
CACGAGGCCCAGCGGAGGAAGAACGTCCTCCGGGGCGCTGTGAGGGCGCAGGCGCCGGCCCTGGTGCGGTCGTCCTCCCT
GGACCGGCGCGTGGAGTTCGGCGTCAAGAACAAGAGCTCGTGGCTTCCGCTGCGCGCCGCCCGCGCG---GCGACGGAGG
CGGAGGAGGACGGGCCGTCGTCCGAGGACTACACCTGCGTCATCTCCCGCGGGCCCAACCCGAGGACGGTGCACATCTTC
GGCGACCGCGTCGTGGAGGGCGACCGCGCGCTGGAGAGCCCGCCGCCGGCGCCG------GCGCGCCAGGGCAGAGGCTT
CCTCAGCCTGTGACGCCATGCCCAT--------GCCACCGATAGTAGCAA----TCCTTCCATGA--------TGCGTGC
GTGCGTGCTCCGGTAAAGTAGTAAGTCCTGTTGATGCTGTCAGTATTTTGTTCTTGGATCGATCGATCTCGATGAGATGA
TCAGGCAGATGCCTCTTGGATCAGATGATCAAACAGATTGGGTTTTGTCTGTACTGTAATATATAGGAATTCTATATCTC
TTTGCTGCAACAACATGTTTGTACAAGAGCAAGATCACATCCGAACATGTAAAATTAGTA---GCTTATGAATGAATTGA
TCGTTGAAAATGCACTGGATTTCTTGGTTGCCACTTGCCAGCGCTTGTGATCAGGTAGTAC---------CTTCTGAATG
ACATGAACGTTAAAAATGCACTGAATTTCTCGAGCCCTGGGCAGAGCCAGTGATCAGAATCTTGGAACCATTTCCCATGA
AGCTACTCCTACTAGTTGCAATCAATCAATCA--AGCCAGGCCACTCCCCTACTCTACTCTACCTCAGCTAGCCTTGCTG
CAAGATGCTCACTGCATCTCCAATAATTGGCGGTTTCTT--GCAGCAGCAGTAGCAGA-AAACAGGGCCAGGGCCATGGG
CCGTGGGCCATGGCAATGATTGATGTCCCCCGCGCCGGGCCCTGGC-----CACTCGAGAGACTTGAGAGCACGGTGGTG
CCTTGTCCTAGTCAGGGGCCCGGATTTGGCATACGGTTGCAGCGAACCACTGCGGCGGCGGGCCCCGCCCCCTCTCGTCT
CATCTGATCCGATCCGATCGCCTCCCGC-TCCCATCTCGACTTGTGCTTCAGTTTCTTTTTCGTGACGCCGATGGAATTG
ATGCCCACTCCGCCTCCCCATCACCGA-TTTCTCTTTCTTGATTTTTTTTCTTTCTGGTGATCAATGCATTCTTTTTAAA
CATCAGTACAGACACAGGCGCACGCGCATACACTCGTTCCTATGAATGCATACACGCACACCCTATCCTATAAGCACCTT
CGAAAGACTAAGACGGCATATCATCTTAAGATTTACAAAGTCACCGTAGGCGCCTCGTTGTCGACGGGAACGTCTCCTCC
CACTGAATGCACATCGCCGAAAATTCTAAAATAAATTCAGGAATAAATGCGAGCACCAGAATGAATTTGAACCCTGGTGG
GCTGGGGATACCACACTCCCTCTAACCATCCAACCACAAGTTGGTTCGTTGATCAATGCACTCTTGCTATGAATCGGCTG
ATGTGGA------CCGTGGTGGGCATCTAATGAGTTCTTCTTAGCCCACTTTCTCGCAGGGCAGATAGATGGATGGATAG
ATCAA
>chr5D_363
--------------------------------------------------------------------------------
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------------------------------------------CCGCCAACAGCTTCTTCGGA--AGAACAACTCCGTTGT
TAGGGAGAAGAA-AGTGGCACCGAGGAGAGGCCCTGGCGCTACCGGCACTGGCCAGGCTTCGCCCGACAGTGACCCTCGA
CGAGGAGGGACGCATGTGTCG--GGAGGGGAGGGGTAACGGGTCGTTTGGTGGTGAGACAGAACCGTGTTTTTTTTTCTA
ATCTTGGGACGCTGAATCTTTCCATTGGAAC------GGGAACAATGATTG-AATCTTGTGTGACCCAGCACCG-CGAAT
TGGCGGATTCTGGTGCACCTCCCGTTGGTCGACAGCAAATCCACCTGCCATTCATCAGTGACACCCATGGAATCCGCCCT
TGTGTGCATAGCGCT----AATTGGGTACGGTTCGTCGCCACAC--ACAATGACACAAACTCACACAACAAGACACAAA-
------------CATGCCAGTGAAAACTGAAAACGATCGCAAGCTCTCTTCAATCAGGAAAATAAAAGAAAATA-AAATA
TTATTGGCAGTAGTAAAACTGAAGATAAGGACCTGCAGTTTTGGAAGCAAGCAGAGCACACACAAACCAAACCAAACCAA
CGATGACATCAGTGGAGTGCGAGAGGGGGAGCCCAGCCCT-GCCCGGCCCTTCTTTAAGATCACCACCCGCCCCCATTGC
CCTCTCCCACACCCCCCTCTCTCTCACTCCT---CTCGTCATC----CTCGTCTTCTTCTCGCCCGGTGACACCCGCTCC
CTCTC-----ATTCACCAGCTAGCTTGAGCTTGCTTGCTCTTCTCTGCTGCAAGCCGCTGATCGGTTCT-------CTCC
GGGAGGGAAGCGTCGGGATTTGGCTGTTCTGTCAGGCTGGCTCTTGAAATGTTCAGATCGAAGGTCCAGGAGATGATCCT
TAGGAGGAGGTCCAGGTCCATGAACGGCGCCGGC------TGCGG------GCAGCACGCCGGAGGCAACCTGTCCACGG
CCCCCTGCGACGGTGGAGGC---GGCAAGGGTGC---------------TGCTGTTCGTGCGCCGTCGTTCGCGGCGCCG
AGGCTGCTGCACTCGTCGTCGCTCCCGGCCGGCGGCCGCGCCGCGGTCGTCAT---CGGGAGCCCCGCGCGGGATCCGGA
GACGATGTCCGCCTACGCCATGAGCCCGACCTCCGTGCTTGACGCGTCGGTGACCTTCGGTTCGCCCGGCCCGGCGGTGG
ACGCCGGGGGGAGCAAGCGCCGGCCGTGGTGCGACGGGTGCGCGGGGCCGCACGGGCTCGCCGACGTGCTGGACTGCGCC
CACGAGGCGCAGCGGAGGAAGAACGTTCTCCGGGGCGCCGTGAGGGCGCAGGCGCCGGCCCTGGTGCGGTCGTCCTCCCT
GGACCGGCGCGTGGAGTTCGGCGTCAAGAACAAGAGCTCGTGGCTGCCGCTGCGCTCCGCCCGCGCGGGGGCGGCTGAGG
CCGAGGAGGACGGGCCGTCGTCCGAGGACTACACCTGCGTCATCTCCCGCGGGCCCAACCCGAGGACCGTGCACATCTTC
GGCGACCGCGTCGTGGAGGGCGCCCGCGTGGCAGAGAGCCCGCCGCCGGCGCCG------GCGCGCCAGGGCAGAGGCTT
CCTCAGCCTGTGACGCCATGACATGCCATGCCCGCCACCGATAGTAGTACTACCTCCGTCCATGA--------TGCGTGC
GTGCGTGCTCCGGTAAAGTAGCAAGTCTTGTTGATGCTGTCAGTATTTTGTTCTTGGATCGATCGATCTCGATGAGATGA
TCAGGCAGATGCCTCCTCGATCAGATGATCAAACGGATTGGGTTTTGTCTGTACTGTA--ATATAGGAATTC--TATCTC
TTTGCTGCTGCAACATGTTTGTACCAGAGCAAGATCACATCCGAACATGTAAAATCAGTA---GCTTATGAATGAATTGA
TCGTTGAAAACGCACTGAATTTCTTGGTTGCCACTTGCCAGCGCTTGTGATCAGGAGGATAGTATAGTAGCTTCTGAATG
ACATGAACGTTAAAAATGCACTGAATTTCTCGAGCCCTGGCCAGAGTCTGCGATGAGAATCTTGGAACCATTTCCCATGA
AGCTACTCCTACTAGTTGCGATCAATCAAGCCAGAGCCAGGCCACTCCTCTACTCTACTCTACCTCACCTAGCCTTGCTG
CA--------------TCTCCAATAATTGGTGGTTTCTTGAGCAGCAGTAGCAGAAAATAAGTAGGGCCAGGGCCATGGG
CC-------ATGGCAATGATTGATGTCCCCTGCGCCGGGCCCTGGCATGGCCACTCGAGAGGCTTGAGAGCACGGTGGTG
CCTTGTCCTAGTCAGGGGCCCGGATTTGGCATACGGTTGCAGCGAACCACTGCGGCGGTGGGCCCCGCCTCCTCTCGTCT
CATCTGATCCGATCCGATCGCCTCCCCC-TCTCCTCTGGACTTGTGTTTCAGTTTCTTTTTCGTGACGCCGATGGAATTG
ATGCCCACTCCGCCTCCCCATCACATCTTTTTTCTTTCTTGG-----TTTCTTTCTGCTGATGAATGCACTCT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGCTATGAATCGGCTG
ATGGGGA------CCGTGGTGGGCATCTAATGAGTTCTTCTTAGCCCACTTTCTCGCAGGGTAGATAGATAGAT------
-----
>chr5D_555
TTTTTAAGTCTGTC------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------GACGCTGAATCTTTCAATTCGAACAATGGGGGAATCAATGATTG-AATCTTGTGTGACCTAGCACCG-CGAAT
TGGCAGATTCTGTTGCACCTCCCGGTGGTCGACAGCAAATCCACCTGCCATTCAT----------CATGGAATCCGTCCT
TGTGTGCATAGCGCT----AATTGGGTACGGTTCGTCACCATAC--ACGATGACACAAACTCACACAACAAGACGCCGAG
GC--------------CCAGTGGAAACTGAAAACGATCGCAAACCCTCTCTAC-----------AAAAAGAAGAGAAATA
TTTGCAGTGGTGATAAAACTGAAGATAAGGACCTGCAGTTTTGGAAGCAAGCAGAGCACACACAAACCAAACCAAACCAA
CGATGACATCAGTGGAGTGTGAGAGGGGGAGCCCAGCCCCAGCCCGGCCCTTCTTTAAGATCACCACCCGCCCCCATTGC
CCTCTCCCACACC-------------------------TCATC----TTCGTCTTCTTCTCGCCCGGTGACACTCGAGAG
CAAAGGAATAC-TCACCAGCTAGCTTGAGCTTGCTTGCTG---------------------TCGGTTCT-------TTCC
GGGAGGGAAGCGTCGGGTCCTG--TGTTCTGTCAGGCTGGCTCTTGACATGTTCAGATCCAAGATCCAGGAGATGATCCT
CAGGAGGAAGTCCAGGTCCATGAACGGCGCCGGCGCCGGCTGCGC------GCAGCACGTC---GGCAACTCGTCCACGG
CTCCATGCGACGGT---GGC------AAGGGTGCTGCTGCTG------TTGCTGCTCGTGCGCCGTCGTTCGCCGCGCCG
AGACTGCTGCACTCGTCGTCCCTCCCCGCCGGCGGCCGCGCTGCGGTCACCGGGTCCGGGAGCCCCGTGCGGGACGCCGA
GACGATGTCCGCCTACGCCATGAGCCCGACCTCCGTGCTTGACGCGTCGGTGGCCTTCGGTTCGCCCGGCCCGGCGGTGG
ACGCCGGGGGGAGCAAGCGCCGGCCGTGGTGCGACGGGTGCGCGGGGCCGCACGGGCTCGCCGACGTGCTGGACTGCGCC
CACGAGGCCCAGCGGAGGAAGAACGTCCTCCGGGGCGCCGTGAGGGCGCAGGCGCCGGCGCTGGTGCGGTCGTGCTCCCT
GGACCGGCGCGTGGAGTTCGGCGTCAAGAACAAGAGCTCCTGGCTGCCGCTACGCGCCGCCCGCGCAGGGGCGGCGGAGC
AGGAGGACGACGGGCCGTCGTCGGAGGACTACACCTGCGTCATCTCCCGCGGGCCCAACCCGAGGACGGTCCACATCTTC
GGCGACCGCGTGGTAGA---------------------------------------------------------------
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>chr5A_591
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------------------------------C------GGGATCAATGATTG-AAGATCGTGTGACCCAGCACCGGCGAAT
TGGGGGATTCTGCCGCACCTCCCGTTGGTCGACAGCAAATCCACCTGCCATTCAT----------CATGGAATCCGTCCT
TGTGTGCATAGCGCTCGCTAATTGGGCACGGTTCGTCGCCACAC------------------ACACAACAAGACGCCCAG
CCCAGCCCAGCCCAGGCCAGTGAAAACTGAAAACGATCGCAAACTCTCTCTAC-----------AAAAAGAAGAGAAATA
TTTGCAGTGGTGATAAAACTGACGATAGGGACATGCAGTTTTGGAAGCAAGCAGAGCACACACAAACCAAACC-----TA
CGATGACATCAGTGGAGTCCGAGAGGGGGAGCCCG------GCCCGGCCCTTCTTTAAGATCACCACCCGCCCCCATTGC
CATCTCCCACACCTCTCTCTCTCTCTCTCTCTCCCTCGTCATC----TTCGTCTTCTTCTCGCCCGGTGACACTCGAGAG
GGAAGGAACAATTCACCAGCTAGCTTGCGCTTGCTTGATCTTCTCTGCTGCAAGCCGCTGATCGGTTCT-------TTCC
GGGAGGGAAGCGTCGGGGTTTGGCTCTTCTGTCAGGCTGGCTCTTGACATGTTCAGATCCAAGGTCCAGGAGATGATCCT
CAGGAGGAGGTCCAGGTCCATGAACGGCGCCG------------CATGCGCGCAGCACGCC---GGCAACTCTTCCACGG
CCCCGTGCGACGCCGGCGGC------AAGGCTGCTGCTACTGTTGCTTTTGCTGCTCGCGCGCCGTTGTTCGCCGCGCCG
AGGCTGCTTCACTCGTCGTCGCTCCCTGCCGGCGACCGCGCCGCGGTCATCAC---TGGGAGCCCCGCGCGGGACTCCGA
GACGACGGCCGCCTACGCCATGAGCCCGACCTCCGTGCTGGACGCATCAGCGGCCTTCGGCT---------CGACCGTGG
ACGCCGGCGGGGGCAAGCGCCGGCCGTGGTGCGACGGGTGCGCGGGCCCGCACGGGCTCGCCGACGTGCTCGACTGCGCC
CACGAGGCCCAGCGGAGGAAGAGCGTCCTCCGGAGCACCGTCAGAGCGCAGGCGCCGGCTCTTGTCAGGTCGTGCTCCCT
GGACCGGCGCGTGGAGTTCGGCGTCAAGAACAAGAGCTCATGGCTGCCGCTGCGCGCCGCCCGCGCGGGGGCGGCCGAGG
AGTCGGAGGACGGACCGTCGTCCGAGGACTACACCTGCGTCATCTCCCGCGGGCCCAACCCGCGGACGGTGCACATCTTC
GGCGACCGCGTCGTGGA---------------------------------------------------------------
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>chr5B_597
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------------------------------------------CAATGATTGAAATCTTGTGTGACCCAGCACCG-CGAAT
TTGCG------------CCTCCCATAGGTCGACAGCAAATCCACCTGCCATTCATCAACTACACCCATGGAATCCGTCCT
GGTGTGCATAG----CGCTAATTGGGCACGGTTCGTCGCCACACGCACATGTACACAAACTCACACAAGAAGACGCCGAG
GC--------------CCAGTGAAAACTGAAAACGATCGCAAACTCTCTCTAC-----------AAAAAGAAGAGAAATA
TTTGCAGTAGTGATAAAACTGAAGATAGGGACCTGCAGTTTTGGAAGCGC-----GCGCACACAAACCAAACC-----AT
CGATGACATCAGTGGAGTGTGAGAGGGGTAGCCCAGCCCCAGCCCGGCCCTTCTTTAAGATCACCACCAGCCCCCATTGC
CCTCTCT-------------------------------------------------------------------------
------------------------------------------------------CTGCTGATCGGTTCT-------TTCC
GGGAGGGAAGCGTCGGGTCCTG--TGTCCTGTCAGGCTGGCTCTTGACATGTTCAGATCCAAGGTCCAGGAGATGATTG-
-AGGAGGAAGTCCAGGTCCATGAACGGCGCCGGCGCCGGCTGCGC------GCAGCACGTC---GGCAACTCGTCCACGG
CTCCATGCGACGGC---GGC------AAGGGTGCTTCTGCTG------TTGCTGCTTGTGCTCCGTCGTTCGCCGCGCCG
AGACTGCTGCACTCGTCGTCCCTCCCCGCCGGCGGCCGCGCCGCGGTCGTCAC---CGGGAGTCCCGTGCGGGACGCCGA
GACGATGTTCGCCTACGCCATCAGCCCGACCTCCGTGCTGGACGCGTCGGCGGCCTTCGGCTCGCCAGGCCCGGCCGTGG
ACGCCGGAGGGGGCAAGCGCCGGCCGTGGTGCGACGGGTGCGCGGGGCCACACGGGCTCGCTGACGTGCTGGACTGCGCC
CACGAGGCCCAGCGGAGGAAGAGCGTCCTCCGGGGCGCCGTGAGGGCGCAGGCGCCGGCCCTGGTGCGGTCGTCCTCCCT
GGACCGGCGCGTGGAGTTCGGCGTCAAGAACAAGAGCTCGTGGCTGCCGCTGCGCGCCTCCCGCGCGG---CAGCGGAGG
ACAACGACGACGGGCCGTCGTCGGAGGACTACACCTGCGTCATCTCCCGCGGGCCCAACCCCAGGACGGTGCACATCTTC
GGCGACCGCGTCGTGGA---------------------------------------------------------------
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>chr5B_796
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-------------------------------AACAATCTCAAACTCTCTTCAATCAGGAAAATAAAAGAAAAGGGAAATA
TTATTGGCAGTGGTAAAACTGAAGATAAGGACCTGCAGTTTTGGAAGCAAGCAGAGCACACACAAACCAAACC-----AA
CGATGACATCAGTGGAGTGCGAGAGGGGGAGCCCG------GCCCGGCCCTTCTTTAAGATCACCACCCGCCCCCATTGC
CCTCTCCCACACCTCTCTCTCTCTCTCTCTCTCTCTCCCCACCTCCTCTCGTCTTCTTCTCGCCCGGTGACACCCGCTCG
CCCCC-----ATTCACCAGCGAGCTCGAGCTTGCTTGCTCTTCTCTGCTGCAAGCCGCTGATCGGCTCT-------CTCC
GGGAGGGAAGCGTCGGGATTTGGCTGCTCTGTCAGGCTGGCTCTTGACATGTTCAGATCGAAGGTCCAGGAGATGATCCT
CAGGAGGAGGTCCAGGTCCATGAACGGCGCCG------------C------GCAGCACGCC---GGCAGCTCGCCCACGG
CTTCGTGCGACGCCGGCGGAGGTGGCAAGGG------------------TGCTGCTCGCGCGCCGTCGTTCGCCGCGCCG
AGGCTGCTGCACTCGTCGTCGCTCCCCGCCGGCGGCCGCGCCGCGGTCGTCAT---CGGGAGCCCCGCGCGGGACCCAGA
GGCGTTGTCCGCCTACGCCATGAGCCCGACCTCCGTGCTGGACGCGTCGGCGGCCTTCGGGTCGCCCGGCCCGGCCGTGG
ACGCCGGAGGGGGCAAGCGCCGGCCCTGGTGCGACGGGTGCGCGGGCCCGCACGGGCTCGCCGACGTGCTGGACTGCGCC
CACGAGGCCCAGCGGAGGAAGAACGTCCTCCGGGGCGCCGTGAGGGCGCAGGCGCCGGCCCTGGTGCGCTCGTCCTCCCT
GGACCGGCGCGTGGAGTTCGGCGTCAAGAACAAGAGCTCGTGGCTGCCGCTGCGCTCCGCCCGCGCGGGGGCGGCGGCGG
AGGAGGACGACGGGCCGGCGTCCGAGGACTACACCTGCGTCATCTCCCGCGGGCCCAACCCGAGGACGGTGCACATCTTC
GGCGACCGCGTCGTGGAGGGCGACGGCGTGGCGGAGAGCCCGCCGCCGGCGCCGGTGCCGGCGCGCCAGGGCAGAGGCTT
CCTCAGCCTGTGACGCCATGCCCATGC-------CACCCCATAGTAGCAA----TTCCCCCATGATGCGTGCGTGCGTGC
GTGCGTGCTCCGGTAAAGTAGTAAGTCTTGTCGATGCTGTCAGTATTTTGTTCTTGGATCGATCGATCTTGATGAGATGA
TCAGGCAGATGCCTCCTCGATCAGATGATCAAACGGATTGGGTTTTGTCTGTA-------ATATAGGAATTC--CATGCC
TTTGCTCCAACAACATGTTTGTACCAGAGTAAGATCACATCCGAGCATGTAAAATTAGTACTAGCTTATGAATGAATTGA
TCATTGAAAATGCACCGAATTTCTCAAT---CCCTGGCCAGAGCCTGCGATCAGAATAGTTGCTTCCG-------GAATG
AATTGAACGTTGAAAATGCACTGAATTTCTCGGTTGT----CAGAGCCTGTGATGAGAATCTTGGAACCATTTCCGATGA
AG---------CTAGTTGCAATCAATCAACTCCTCTA----------CTCTACTCTACTCTACCTCACCTAGCCTTGCTG
CAAGATGCTCACTGCATCTCCAATAATTGGCGGTTTCTTCAGCAGCAGTAGCAGCAGA-AAATAGGGCCAGGGCCATGGG
CC-------ATGGCAATGATTGATGTCCCCTGCGCCGGGCCCTGGC-----CACTC-----------GAGCACGGTGGTG
CCTTGTCCTAGTCAGGGGCCCGGATTTGGCATACGGTTGCAGCTAACCACTGCGGCGGTGGGCCCCGTCCCCTCTCGTCT
CATCTGATCCGATCCGATCGCCTCCCCCCTCCCGTCTCGACTTGTGTTTCAGTTTCTTTTTCGTGACGCCGATGGAATTG
ATGCCCACTCCGCCTCCCCATCACCAA-TTTTTCTTTCTCGG-----TTTCTTTCTGGTGATCAATGCACTC--------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GGCTG
ATGTGGACCGTGTCCGTGGTGGGAATCTAATGAGTTCTTCTCAGCCCACTTTCTCGCAGGGCAGATAGATGGAT------
-----
>SNPs
SS--SSSSS-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S------S---S-SS------------S--S
S-S-------SSS-------S-S-S---------S-S---S----------S---------S---S--------------
---S---------SS-SSSS-SS--S-S------S-----SS---S------------S--S-S-S-------S---S--
----------------------S-----------------------------S---------------------------
-----S-------------------------------S------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-------------------------------------S-SS------------S--------------------------
--------------------------S----S-------------------------------------SSSSSSS----
------------S-----S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
---------------------------S----------------------------------------------------
------------S---------S--------------S------------------------------------------
--------------------------------------S-----------------------------------------
---------------------------------------------S---------------------------S------
--------------------------------------------------------------------------------
----------------------------S-SS------------------------------------------------
---------------------------------------------------------S----------------------
---------------------------S----------------------------------------------------
---------------S-S----------------S-----------------------SS------------SS------
------------------------S-------------------------------------------------------
-----------------S-------------------------------------SS-SSS-------------------
----------------------------------------S-------S-----S-------------------------
-----------------------------S-S----------------S------------------S------------
------------------------------------------------S--S----------S-----------------
--SSSSSSS---------------------S------------------------------S------------------
----------------------------------------------------------S---------------------
--------------------------S------S------------S---------------------------------
-------------------------S-----S---------SSSSSS----------------------S---SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
--------------------------------------------------------------------------SSSSSS
SSSSS
>forward_150
--------------------------------------------------------------------------------
--------------------------------------------------AACAAGCAGAGGAGTCACCG----------
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>reverse_1094
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-----------------------------------------------------ATCCCCATTCACCAGCTAGC-------
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>forward_360
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--------------------AATCGCGATTCTGACAGCCT----------------------------------------
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>reverse_2441
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----------------------------------------GCAGAGCCAGTGATCAGAATCT------------------
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