>input_sequence_58266
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-----------------------------------------------------------------ATGCAGCAGC---CT
GCTACCAACATCGCTCCCCACACCCAACA---CCCACCACCTTCTTTGGCCCATGCTGCAGGGGCTAGATCCAGAGCTAC
ATATTCTCTCCCCGGACACCCCGTGTTGCTCTCTCGCCATTCGTATCGGTC---CCGCCATGTGGAGGCTCTAGCCGTTC
ATGCCACTTGCTCCCAAGGAATCTCCAACGGCAACGTCGGCCAAGATATACAACTAAGGTTCTTCTG----AATTAAACT
AGTTTTACATTCATTGTAGAACATTTGGATCTGGTCCAA-------TATATTTGCGGTTTGTTCTGCAACTCACTTATTA
GGACGGACAAGTTCTTCGAGCTGGAGATGACCGTCCATGACAGCGAGCTTGACCAGTATGGAGTCGTTCACAATGCCATG
TATGTTGTTTACATCCACAAAGGTTGGCACCAAAATGATAT--CTATCTACCGCAGAGCTCGGGTCATTTACCTTTTA--
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--------------------------T-TATGGACATGCACAGTGTTGGTTCTTACTTTTGTTTTGGACAGGAGGTTAAA
CCCTCCATCGTCTCCGTATCAATTATTGATGCACACA---ACTACTATATCTTAATTTCCACTTTAAAATTACATGAAGC
TCGAGAGGAGATGGCTGCGAGCATTGGCTTCAGCATGACCTCCATAGCACGCAGCGGCAACGCGATGGCGGTCTTGGAAC
TGAACATCAAGTACTTCAAGCCTCTACTGGTATGTCACGTCCGAAACCTTTAATAAGGCTTGGAATCTCAAGGTTTTTAG
TATTTTCAAACCCGGAAACCTCAAGCTTTATAGAGCATTAATC--ATTCTCTCTTCCTATACTGATTGATGCCCAGCGAG
GTGCGAAGTTTGTTGTCAAGGTGAGGCTTGTCCAGATAAAGGGCACAAGGATACTCGTCGATCACATCATCGAGACGCTG
CCAAACCGTGAGGTACGCGCACAAACGATCACGATTACCACCCCTTGTACTGATCAATCATCCCACAAGCACGCGCCCGT
TGATCTCCTCTGATGCAT------GGCATGGCAGCTTGTTTTGGAAGCGACGGCGACCGTCGTCTGCCTCAACAAGGACT
ACCGTCCCACCCGCGTCTTCCCGGAGATGTCGTTCAAGCTGCAGCGCTTCTTCTCGTCCCAGGATGACGAGGATGCAGAC
CAGCTTACCAGTTATAAAGTGTTGTCGTAA--------------------------------------------------
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>chr7D_1_TraesCS7D01G115200
CTCGAGGTCAAGACCCAGCCAA-TGCATTTTTACAAATAATATGAATGGCCTACATCGATCCCTCATCTAAGGTCAGGAG
GAGTCTAGACGTGATGGGGGTGATGAAATATAATGTTTGTCG-----------------------GAGTAACCAATTAGA
GCGTGAATTCAAGAATGTTCG------------------------AGGACCGTGTCAGCAATGCAGATGAGAGGCTATAA
GGTGAGAATATGCACGAAG---TATTTTCTTCAAAATCTCCACATAAAAGGAACAAAAAACCACCACGTGGCAGAGGCAC
CATCATTACTTGGCCCTTTTA-AGCCTCCGTGTCACTGTGAGTCGATAATGGCACATTCCAAACTGCCATTAATTTCTAC
AGTACTTTGTCCCATAAGGGCATGGGCTATGGAGGCAGGAGGAATCTACTGCTCATGCTGGTCACGTAGACAACATATTC
GTGCGCAGCTACTATCTTTTGTGGGTCTGTTCTATCTCTTTCTTCTTCTTCTGTGTTCACGTTCCGTCTCTCCCATGAAG
CTACCCGCGTGGGATACAATAACTAGAACTATCATCTATGCTAACTAGACAATTTTGATCAGATGACATAAAA-------
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-----------------TTAAATGAAAAAAAAGAGTGTTCAGTGTCATATTGTGACACCGTATCATAACAAACACTAGCA
TACTATCATGTATCAGGCACTATGGATGTGCGTAGTATCATATGCTCCCTTCGTATCATAATATAAGAGCGTCTTTGAAG
GG------------------------------------------------------------------------------
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------------------------GATACGAGTCAATGTGCGAGCGCAGGTGGCCAGCGG-GCAGTAGTACAGGGCTATG
CGTTGGCCATGCACTGAGAATACTATTCATGATTGATCGACACGGAAAATACGGAAAAGACAGCAGGTAGGTGATGGAAT
CTATTTAAAGTGGCAAGAGTGAAGCGCCGCCACAAGCATGCGAGCGCCGGCTCTATATAGACGGGCATGTGCATACCGCA
TAC---ACCCCCAGGCC---TCAGAAGAGAGAGCGAAGAGTGCAATTCCCTCCTGCTCCAGCACCATGCAGCAGC---CT
GCTACCAACATCGCTCCCCACACCCAACA---CCCACCACCTTCTTTGGCCCATGCTGCAGGGGCTAGATCCAGAGCTAC
ATATTCTCTCCCCGGACACCCCGTGTTGCTCTCTCGCCATTCGTATCGGTC---CCGCCATGTGGAGGCTCTAGCCGTTC
ATGCCACTTGCTCCCAAGGAATCTCCAACGGCAACGTCGGCCAAGATATACAACTAAGGTTCTTCTG----AATTAAACT
AGTTTTACATTCATTGTAGAACATTTGGATCTGGTCCAA-------TATATTTGCGGTTTGTTCTGCAACTCACTTATTA
GGACGGACAAGTTCTTCGAGCTGGAGATGACCGTCCATGACAGCGAGCTTGACCAGTATGGAGTCGTTCACAATGCCATG
TATGTTGTTTACATCCACAAAGGTTGGCACCAAAATGATAT--CTATCTACCGCAGAGCTCGGGTCATTTACCTTTTA--
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--------------------------T-TATGGACATGCACAGTGTTGGTTCTTACTTTTGTTTTGGACAGGAGGTTAAA
CCCTCCATCGTCTCCGTATCAATTATTGATGCACACA---ACTACTATATCTTAATTTCCACTTTAAAATTACATGAAGC
TCGAGAGGAGATGGCTGCGAGCATTGGCTTCAGCATGACCTCCATAGCACGCAGCGGCAACGCGATGGCGGTCTTGGAAC
TGAACATCAAGTACTTCAAGCCTCTACTGGTATGTCACGTCCGAAACCTTTAATAAGGCTTGGAATCTCAAGGTTTTTAG
TATTTTCAAACCCGGAAACCTCAAGCTTTATAGAGCATTAATC--ATTCTCTCTTCCTATACTGATTGATGCCCAGCGAG
GTGCGAAGTTTGTTGTCAAGGTGAGGCTTGTCCAGATAAAGGGCACAAGGATACTCGTCGATCACATCATCGAGACGCTG
CCAAACCGTGAGGTACGCGCACAAACGATCACGATTACCACCCCTTGTACTGATCAATCATCCCACAAGCACGCGCCCGT
TGATCTCCTCTGATGCAT------GGCATGGCAGCTTGTTTTGGAAGCGACGGCGACCGTCGTCTGCCTCAACAAGGACT
ACCGTCCCACCCGCGTCTTCCCGGAGATGTCGTTCAAGCTGCAGCGCTTCTTCTCGTCCCAGGATGACGAGGATGCAGAC
CAGCTTACCAGTTATAAAGTGTTGTCGTAAATTTCCTGTGCATGGTATTGTAGACACAAGATGTTCATCCTTGAACCTGT
TAAAAATTTGTGAACGATGCTTTATAGCCTGTATAAATTACTCTACCTGATGTTGCTAAGATAGTGGCTTCAGACTATCT
GATGTACTACTTTATAAAGTTTTTGTGAATAATTAATAAAATGGCTGCATGCATTGTCCAGATGAATAGGCCGGAGGTAA
TCCTCCTTTTGTAAAAAG---TAAAAAATACTCTACCATAATATTCTTAATAAAAGTTTGGACGA---CTGGGCATGACC
AGTAAATAAAAAATACAA---AACGAAATATGTAT-TTGGCAATCATGTGCCCGATTGCAAAAGTGCCAACCGACCTGAT
CTCCGTCCGATCCGGCCTCACACGCTTCGGTCGCTCGATATGCCTCCTGCGCGATCCCGTCGTTAATTCC--TTTTTT-C
CACTTTTCTCTCCAGGTGCGGTCTTGCTCGCTCCGCCTTTGCGCCTATGGCTTTTTCCTCCTTCCTCCTGTCGGCGTCGT
GAGCTGCGCCAGGCCATCGGCCGGTATCCCCCGGCGTGACCTCCCCGATTGATGCTCCGCGGTGGCGCGATGGGAGACGT
TGCGGGGTCGGCACCCCAGCGCCTGCTGCAGCCGCATGCCGCCGCCTTCCGCACCTCCCAGGCAATCGTCG------TCG
TCGCCGTCGGCACCCACTTCGTCGGTACACCCGCATCC-CCCCTCTCTCGCGTCTCTTTCTGGGTGCCACGACGGAGCTA
ACTCGGAGGGCGGGTTCAGTGATCCGGTCCCTGCTGTTGATCTGGGTATGACGGCGCCTGAATCGGATTACTGAATGTGG
CAACAGAACCTTTACATGTGTATACATAGGTTGAATGAACTAACAGAAACTGAGAATTGTCACATTAGTATTGATCTGAT
TACTGGTCCTAGCATTATTAGCTCAACAGTCTCTTGCGCCTAAGATGACGGAGTGGGATTTTGATAGTAAGTTGTTAGCT
GGATGTAATT
>chr7B_1
CTTGAGGTCAAGACGCAGCCAAGTGCATTATTAAAAATAATATTTATGGCCTACATCGATCCCTCATCTAAGGTCGGGAG
GAGTCTAGACGGGATGGAGGTGTTGAAATATGATGTTTGTCCTTGTAGTCCTGTTCAGAATTTTAGAGTAATTGACTAGA
GCATGAATTCAATAATGTTCCCACCGAGTTCTTTGCAATTCAGCAAGGACTGTGTCAGCAATGCAGATGAGAGGCTAGAA
GGTGAGAATATGCACGAAG---TATTTTCTTCAAAATCTCCA-ATAAAAGGAAAAAAAATACTGCA--TGGCAGAGGCAC
CATCATTACTTGGCCCCTTTAGAGCCTCCGTGTCACTGTGAGTCGATAATGGCACATTCCAAACTGCCATTAATTTCTAC
AGTACTTTGTCCCATAAGGGCATGGGCTATGGAGGCAGGAGGAATCTACTGCTCATGCTGGTCACGTAGACAACATATTC
GTGCGCAGCT-------TTTGTGGGTCTGTTTTCTCTCTTTC---TTCTTCTGTATTCACGTTCCGTCTCTCTCATGAAG
CTACCTGCGTGGGATACAATAACTAAAACTATCACTTATGCTAACTAGACAATTTTAATGAGGTGACATAAAA-------
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-----------------TTAAATGAAGAAAGAGAGTGTTCAGTATCATATCGTAACACCGTATCATAACAAACACTAGCA
TACTATCATGTATCAGGCACTATAAATGTGCGTAGTATCATATACTCCTTTCGTCCCATAATATAGGAGTGTTTTTGAAG
GG------------------------------------------------------------------------------
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------------------------AATACGAGTCAATGTGCGAGCGTAGGTGGCCAGCGG-GCAGCAGCACAGGGCTATG
CGTTGGCGATGCACTGAGAATACTATTCATGATTGATCGATACGGAAAATACGGAAAAGACAGCACGTAGGTGATGGAAT
CTATTTAAGGTGGCAAGAGTGAAGCGCCGCCACAAGCATGCGAGCGCCGGCCCTATATAGACGGGCACATGCATACGGCA
TACCATACCTCCAGGCCTCATCAGAAGAGAGAGCGAAGACTGCAATTCCCTCCTGCACCAGCACCATGCAGCAGC---CG
GCTACCAACATCGCTCCCCACACCCAACA---CCCACCACCTTCTTTGGCCCGTGCTGCAGGGGCTAGATCTAGAGCTAC
ATGTTCTCTCCCCGGACACCTCCTCTTGCAATCTAGCCATCCGTCTCGGCC---CCGCCATGTGGAGGCTCTCGCCGGCC
CTGCCACTTGCTCCCATGGAATCTCCAATGGCAACGTCGGCCAAGATATACAACTAAGGTTCTTCTG----AATTAAACT
AGTTTTACATTCATTGTAGAACAATTGGATCTGGTCCAA-------TATATTTGCGGTTTGTTGTGCAACTCGAC---TA
GGACGGACAAGTTCTTTGAACTGGAGATGACCGTCCATGACAGCGAACTGGACCAGTATGGAGTCGTTCACAATGCCATG
TATGTTGTTTACATCCACAAAGGTTGGCACCAAAATGT------TATCTACCGCAGAGCTCGGGTTGTTTACCTTTTA--
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--------------------------TATATGGACATGTACGGTGTTGGTTCTTAA-TTTGTTCTCGACTGGAGGTTAAA
CCCTCGATCGTCTCCATATCAATTATTGATGCACACAGACACAACTATATCATAATTTCTAC-TTAAAATTACATGAAGC
TCGAGAGGAGATGGCTGCGAGCATTGGCTTCAGCATGACCTCCATAGCAAGCAGCGGCAACGCGATGGCAGTCTTGGAAC
TGAACCTCAAGTACTTCAAGCCTCTACTAGTATGTCA-ATCCGAAATCTT---TCAGACTGGGAATCTCAAGGCTTT---
TATTTTCAAACCCGGAAACCTCAAGCTTCATA-----TTAACC--ATTCTCTCTTGGTATACTGATTGATGCCCAGCGAG
GTGCCAAGTTCGTTGTCAAGGTGAGGCTCGTCCAGATAAAGGGCACACGGATACTCGTCGATCACATCATCGAGACGCTG
CCAAACCGTGAGGTACGCGCACAAACC------ATTACCACCCCTTGTACTGATCAATCATCCCACACGCACGCCCCCGT
TGATCTCCTCTGATGCATATGCATGGCATGGCAGCTTGTTTTGGAAGCGACGGCGACCGTCGTCTGCCTCAACAAGGACT
ACCGTCCCACCCGCGTCTTCCCGGAGATGTCGTTCAAGCTGCGGCGCTTCTTCTCGTCCCAGGACGACGAGGGTGGAGAC
CAGCTTACAAGTTATAAAGTGTTGTCGTAAATTTCCTGTGCATGGTGTTGTAGACACAAGATGTTCATCCTTGAACCTGT
TAAGAATTTCTGAACGATGCTTTATAGCCTGTATAAATTACTCTACC---------------------------------
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>chr7A_158
AGGACCA-------------------------------------------------------------------------
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----------------------------------------------------TGTCAGCAATGCAGATGAGAGGCTAGAA
GTTGAGAATATGCGCCGAAGTATATTTTCTTCAAACTCTCCACATAAAAGGAAAAAAAACT-ACCACGTGGCAGAGGCAC
CATCATTACTTGGCCCTTTTAGAGCCTCCGTGTCACTGTGAGTTGATAATGGCACATTCCAAACTGACATTAATTTCTAC
AGTACTTTGTCCCATAAGGGCATGGGCTATGGAGGCAGGAGGAATCTACTGCTCATGCTGATCACGCAGACAAAATATTC
ATGCGCAGTTACCATCTTTTGCGGTCATGTTCTCTATATTTC---GTCTTCTTTATTCCCGTTCTCTCTCTCTCTCTCTC
TGGCAAGAGCATGATTAAGTATAGCCAACAACCGGGTAAAAGAGTTGTCACCTCATTATAGTCTACGGAAAAAAGTTCAT
TTTACTATCCTGAATAAACTTGGTGGTTCACATAACTCCCTGATCATTTTTTCTGCTCTTTTAACCCGATCTATCCAATA
CAGTTCAGAAATGGTCTTAAGTGGGTTTCCTTAGGTGGTTTGCTGATGTGGACAAGGTCAAAGTGGTATTTGACCAGTGG
ACCCCTTGTCAAGCAAACCATCACCAGGGCGTTGCTCCCGCCGACGGACCCTCGCCGGGCTCCCCTGCCCAAGCTCGGCC
CCGCCGCCACTCAACCTCACCAGCGCGCTGCTGCCGTCGTGCCACCTGCTGGAGCAGGCCTGAATCTTCTCGCCACCTCG
CTCCTGATAACAAAGGAGGCAGAGGCGTTGCAGCGGCGACACATGCCAGCGAACGGCGGCCTCCCCGTCGCTGTTGGCCA
CGCGGGGCTCATCCGGAGTTCCGCAGCGCCACACGCCGCAGTAGGGCTCAGTTGGCAGGGGATGGCTACGAGAGCCAAAT
CTCAAGCGTGGACGCGACAGAAGGGATGGGAAGCACAGTAGCGCGCCGCACCGGCGATGGTAGGCTCCTCCTACGGCTGC
GACCACGCCGGGCTACGCCTGCACCCTGCCACACCACGCACACGAGCGTGCGGTCGGCAAGTAACAGCAGCAGCGCCGCA
CCTTTCATGGACGGAGGACAACCTTGGGATCGTGAGGTCGATGGCGACGCCACGGCTCGCAAAGCCTTGCTCCGAGGACG
GCTGCGGTCTCGCGCTCTTCAGGGGAGCACCATGGTGCTTGGTAAGCAGGGAAGGAGAAGGGGGTTTCGCCTGAGTAAGA
GATCAAGGGGGCGGCGGTCGATGCCGGAGTTGGGGAAGAAGACATGGGCAACGGCAATTCACAGCAGCCCAGACAAATTC
CTTTAGCACGAATGTATAGCAGAGCAAGGCGAGGCTCTAGGACAAGGCTTCACGGCGAGGAACAGGTGTTGGCCACCCTG
ACGAAGAACTACAGCGGGCACCAGAGTTCGGCCACGCCGGGAAAGGTCCTCGGGACGCGCGGCTCCAGATGGACGAGACT
ATCAGCTTCAGGGGAGCACCATGGTGCTCGGGAAGCAAATGAGGGGAAGCGGGGGTCGCCGGAGGAAGAGATCGAGGTTG
TAGAGGTCAATACCGGAGGCAGGGAAGAAGACATGTTGACGGCCATTCACGGCGACCCGGACAAGTTCCTTTGCTAGGAG
TGTATAGCGAAGCGAGGTGAAGCTCTCGGACAATGTAGCAAGCGGAGGAGGAGGCGTTGGCCGCGCGAGCGATGAACGAC
AGTGCCGTCGGCGTGAACTGAGCCCCGGCTACACTCTTCACCTAATCAGGGCATGAAGTTGAGGAGGGGGGCCCATCTGC
TTGTCAAATACCGCTTTTGACTTTGTCCACATCAGCACTTAATAAGGGCAAAACCACCCGGGGACGCTTTTTGGCCGGTA
TGAAATTGTTGAGGGGGTTAAGGGAACTAAAATAAAGATCAGGGTGTTATGTGAACCACGAGGTTTGTTCAGGGTAGTAA
AATGGATTTTTTTTCTAGTCTACCTAATAGCCAATGTTTATAATGGTTACTAAGAAATATACTTTATTAATATATGATCC
ATCTTACACTTTTATAATATTTTTTAGAGCTCGTGCTGCGGCTGGCTGTTACTAATCTACAGTTGTCTTTCCTTCTCTCC
TTTTCTCTTTTGTCCAACTTAATAGAAATATAACACTTTAATTCTTACAGCCTACTGATAGTACTTTATTAGACTTGCTG
CTAAGCAGATGTACTGCCTCTCTCTTCTCCTTCTCCTTTCCTCTCTCTTCTCTGTTTCTCTTCCTTCTATCGATCGACTC
GATGGAGCAGCCGCTACAACTGACAATCCGAGCCAATGTCCGAGCCTAGGTGGCATGCGGAGCAGTAGTACAGGGCTATG
CGTTGGCCACGACCTCAGAATATTATTCATGAATCATGATTGATC--AATACGGAAAAGACAGCACGTAGGTGATGGCAT
CTATTTAAGGTGGCAACAACGAAGCCCCA-CACAAGCATGTGAGCGCCGGCCCTATATAAACGGGCATGTGCATAC--CA
TACCATACCCCCAGGCC---TCAGAAGAGAGAACAAAGAGTGCAATTCCCTCCTGCACCA------TGCAGCAGCCTGCT
GCTACCAACATCGCTCCCCACACCCAACAACACCCACCAGCTTCCTTATCCCATGCTGCATGGGCTAGATCTAGAGCTAC
ATGTTCTCTCCCCGGACACCTCGTGTTGCTCTCTCACTGTTCGTCTCGGCCCCGCCGCCATGTGGAGGCTCTCGCCGTTC
CTGCCACTTGCTCCCAAGGAATCTCCAACGGCAACATCGGCCAAGATGTACAACTAAGGTTCTTATAAATTAATTAAGCT
AGTTTTACATTCATTGGAGAACATTTTGTCGAATGTAATAGCTCCGTAAATTTGTGGTTTGTTGTGCGACTCGATTATTA
GGACAGACAAGTTCTTCGAACTGGAGATGACCGTCCATGACAGCGAGCTTGACCAGTATGGAGTCGTTCACAATGCCATG
TATGTCGTTTACATCCACAAAGGTTAGCACCAAAATGATACTACTATCCACCACAGAGCTCGGGTTATTTACCTTTTACT
CCCTCCGTTCGGAATTACTTGTCTCGGAAATGGACGTATCTAAAGCTAAAATACGTCTAGATACATCCATTTCTGCGACA
AGTAATTCCGATCGAAGGGAGTAGTATATATGGACATGTACTATCTA---------------------------------
----CCACAGTCTCTGTATTAATTGATGC---------ACACGACTATATCTTAATTTCTAC-TTAAAATTACATGAAGC
TCGAGAGGAGATGGCTGCGAGCATTGGCTTCAGCATGACCTCCATAGCACGCACCGGCAACGCGATGGCGGTCTTGGAAT
TGAACCTCAAGTACTTCAAGCCTCTACTAGTATGTCACATCCGAAATCTT---TAAGGCCGGGAACCTCAAGGTTTT---
TATTTTCAAACCCGGAAACCTCAAACTTCATA-----TTAACCATATTCTCTCTTGGTATACTGATTGATGCCCAGCGAG
GTGCCAAGTTCGTTGTCAAGGTGAGGCTCGTCCAGATAAAGGGCACACGGATACTCGTCGATCACATCATCGAGACGCTG
CCAAACCGTGAGGTACGCGCACAAACG------ATCACCACCCCTTGTACAGATCAATCATCCCACACGCACGCGCCCGT
TGATCTCCTCTAATGCATG-GCATGGCATGGCAGCTTGTTTTGGAAGCGACGGCGACCGTCGTCTGCCTCAACAAGGACT
ACCGTCCCACCCGCGTCTTCCCGGAGATGTCGTTCAAGCTGCAGCGCTTCTTCTCGTCCCAGGACGACGAGGGTGGAGAC
CAGCTTACAAGTTATAAAGTGTTGTCGTAAACTTCCTGTGCATGGTGTTGTAGACACAAGATGTTCATCCTTGAACCTGT
TAAGAATTTGTGAACGATGCTTTATAGCCTGTATAAATTACTCTATCTGATATTGCTAAGACGATGGTTTCAGACTACCT
GATGTACTACTTTATAATGTCTTTGTGAATAATTAATAAAATGGTTGCATGCATCGCCCAGATGCAGAGACCGGGGGTAA
TCCTCCTTTTCTAAAAAAAAATAAAAAATATTATACCATAATATTCTTAATAAAAGTTTCGACAACATCTGGGCATGAAC
AGTAAATTTAAAAATACAAAA-----------------------------------------------------------
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>chr3D_2473
ATAAATAAT-----------------------------------------------------------------------
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----------------AA---TACGAAATATGTAT-ATGGCAATCGTGTGGCAGATTGCAAAAGTGCCAAACGACCTGAT
CTCCGTCCGATCCGGCCTCACACGCTTTGGTCGCTCGATATGCCTCGTGCGTGATCCCGTCGTTAGTTCC--TTTTTCTC
CACTTTTCTCTCCAGGTGCGGTCTCACTCGCTCTGCCTGTGCGCCTATAGCTTTTTCCTCCTTCCTCCTGTCGGCGTCGT
GAGCTGCGCCAGGCCACCGGCCGGGATCCCCAGGCGTGACCTCCCCGATTGATGCTCCGCGGTGGCGCGATGGGAGACGT
TGCGGGGTT-------------------------------GCCGCCTTCCGCACCTCCCAGGCAATCGCCA------CCG
TCGCCGTCGGCAACCACTTCGTCGGTACACCTGCACCC-CCCCTCTCTCGCGTCTCTTTCTGGGTGCCATGACGGAGCTA
ACTCGGAGGGCGGGTTCAGTGATCCGGTCTCTGCTGTTGATTTGGGTATGACGGCGCCTGAATCGGATTACTGAATGTGG
CAACAGAACCTTTACATGTGTATACATAGGTTGAATGAACTAACAGAAATCGAGAATTGTCACATTATTATTGATCTGAT
TACTGGTCCTAGCATTATTAGCTCAACAATCTCTTGCGCCTAAGATGACGGAGTGGTTTTTTGATAGTAAGTTGTTAGCT
GGATGTAATT
>chr6B_2476
---AATAAT-----------------------------------------------------------------------
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----------------AAATAAATGAAATATGTAT-TTGGCAACCCTGTGCCCGATTGCAAAATCGCCACACGACCTGAT
CTCCGTCCAATCCGGCCTCACACGCTTCGGTCGCTAGATATGCCTCG--CGCGATCCCGTCATTAGTTCT--TTTTTCCC
CACTTCTCTCTCCAGGTCCGGTCTCGCTCGCTCCGCCTGTGCGCCTATGCCTTTTTCCTCCTTCCTCCTGTCGGCATCGT
GAGCTGCGCCAGGCCATCGGCCGGGATCCCCCGGCGTAACCTCCCCAATTGATGCTCCGCGGTGGCGCGATGGGAGACAT
TGCGGG-TCGGTGCCCCAGCGCTTGTTGCAGCCGCATGCCGCCGCCTTCCGCACCTGCCAGGCAATCATCG------CCG
TCGCCGTCGGCACCCACTTTGTCGGTACACCCGCATCCCCCCCTCTCTTGCATCTCTTTCTGGGTGCCACGACGGAGCTA
ACTCGGAGGGAGGGTTCAGTGATCCGGTCTCTGCTGTTGATCTGGGTATGACAGCGCCTGAATCGT-TTACTGAATGTGG
CAACAGAACCTTTACACATGTGTACATAGGTTGAATGAACTAACAGAAACCGATGATTGTCACATTATTATTGATCTGAT
TACTGGTCCTAGCATTATTAGCTCAACAGCCTCTTGCGCCTAAGATGACGGGGTGGTTTTTTGATAGTAAGTTGTTAGCT
GGATGTAATT
>chr4A_2486
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---------------------AACGAAATATGTAT-TTGGCAACTCTGCGCCCGATTGCAAAATCGCCACACGACATGAT
CTCCGTCCGATCCGGCCTCACACACTTCGGTCGCTGGATATGCCTCGTGCACGATCCCGTCGTTAGTTCC--TTTTTTTC
CACTTTTCTCTCTAGGTCTGGTCTCGGTCACTCCGCCTGTGCGCCTATGCCTTTTTCCTCGTTCCTCCTGTCGGCATCGT
GAGCTGCGCCAGGCCATCGGCCGGGATCCCCCGGCGTAACCTCCCCAATTGATGTTCCGTGGTGGCGTGATGGGAGGCGT
TGCGGGGTCGATGCCCCAGCGCCTGCTGCAGCCGCATGCCGCCGCCTTCCGCACCTGCCAGGCAATCGTCA------CCG
TCGCCGTCGGCACCCACTTCGTCGGTACACCCGCATC-CCCCCTCTCTCGCATCTCTTTTTGGGTGCCACGACAAAGCTA
ACTCGGAGGGCGGGTTCAGTGATCCGGTCTCTGCTGTTGATCTGGGTATGACGGCGCCTGAATCAT-TTACTGAATGTGG
CAACAGAACCTTTACACATTTGTACATAGGTTGAATGAACTAACAGAAACTGAGAATTGTCACATTATTATTGATCTGAT
TACTGGTCCTAGCATTATTAGCTCAACAGTCTCTTGCGCCTAAGACGGCGGAGTGGTTTTTTTATAGTAAGTTGTTCGCT
GGATGTAATT
>chr2D_2489
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------------------------GAAATATGTAT-TTGGCAACCCTGTGCCCAATTGCAAAATCGCCACACGACCTGAT
CTCCGTCCGATCCGGCCTCACACGCTTCGGTCGCTGGATATGCCTCG--CGCGATCCCGTCGTTAGTTCC--TTTTTTTT
CACTTTTCTCTCCAGGTCTGGTCTCGCTCGCTCCGCCTGTGCGCCTATGCCTTTTTCCTCCTTCCTCCTGTCGGCATCGT
GAGTTGCGCCAGGCCATCGGCCGGGATCCCCCGGCGTAACCTCCCCAATTGATGCTCCGCGGTGGCGCGATGGGAGACGT
TGCGGGGTCGGTGCCCCAGCGCCTGCTGCAGCCGCATGCCGCCGCCTTCTGCACCTGCCAGGCAATCGTCGCCGTCGCCG
TCGCCGTCGGCACCCACTTCGTCGGTACACCCACATC-CCCCCTCTCTTGCGTCTCTTTCTGGGTGCCACGACGGAGCTA
ACTCGGAGGGCGGGTTCAGTGATCCGGTCTCTGCTGTTGATCTGGGTATGACGGCGCCTGAATCGT-TTACTGAATGTGG
CAACAGAACCTTTACACATGTGTACATAGGTTGAATGAACTAACAGAAACCGAGAATTGTCACATTATTATTGATCTGAT
TACTGGTCCTAGCATTATTAGCTCAAAAGTCTCTTGCGCCTAAGATGACGGAGTGGTTTTTTGATAGTAAGTTGTTAGTT
GGATGTAATT
>chr3B_2489
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------------------------GAAATATGTATATTGGCAACCGTGTGGCAGATTGTAAAAGTGCCAAACGACCTGAT
CACCGCCCGATCCGGTCTCACACGCTTCGGTCGCTCGATATGCCTTGTGCGTGATCCCGTCGTTAGTTCCCTTTTTTTTT
CACTTTTCTCTTCAGGTGTGGTCTCGCTCGTTCCGCCTGTGCGCCTATGGCTTTTTC-TCCTTCCTCCTATCGGCGTCGT
GAGCTGCGCCAAGCCATCGGCCGGGATCCCCCGGCGTGACCTCCCCGATTGATGCTCCGCGGTGGCGCGATGGGAGACGT
TGCGGGGTCGGCGCCCCGGCGCCTGCTGCAGCCGCATGCCGCCGCCTTCCGCACCTCCCAGGCAATCGTCA------ACG
TCGCCGTCGGCACCCA---------------------CCCCCCTCTCTCGCGTCTCTTTCTGGGTGCCACGACAGAGCTA
ACTCGGAGGGCGGGTTCAGTGATCCGGTCTCTGCTGTTGATCTGGGTATGACGGCGCCTGAATCGGATTACTGAATGTGG
CAACAAAACCTTTACATGTGTATACATAGGTTGAATGAACTAACAGAAACCGAGAATTGTCACATTATTATTGATCTGAT
TACTGGTCCTAGCATTATTAGCTCAACAGTTTCTTGCGCCTAAGATGACGGAGCGGTTTTGTGATAGT-AGTTGTTAGCT
GGGTGTAATT
>SNPs
--S-----------S--------------S---S---------SS------------------------------S----
-----------S-----S----S--------S---------S-----------------------------SSS-S----
--S---------S-------S-----------------------------S--------------------------S--
-----------------------------------------------------S-----SS-------------------
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------------S--------------------S--------SSS---------S-----------------S-------
-----S-------------------S--------SS--------------------S--S--S-----------------
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--------------------------S-----------------------S--S--------------------------
-----------------------SS------------------S----S------S-------------S--S-------
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------------------------S---------------------S---------------------------------
----------------------------------------S------------------------S--------------
--------S------------------------------------------S------------------------S---
--------------------------------------------------------S-----------------------
-----------------------------------------------------------------------S--------
--S-----------------S-----------------------S----S----------------------S-------
S-------------------------------------------------------------------------------
---------------------------------------------------------------S--------SS------
-------------------S------------------------------------------------------------
----------------------------------------S------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------S--S-------------SS------S-S---S----------
------------------------------------------S----------------S--S-----------------
--------------------------------------------------------------------------------
-----S----------------------S---------S-------S---SSS-------S----------------SSS
----------------------------S---SSSSS----S-------------SS-----------------------
----S-----S-----------------S------------------S--------------------------------
---------------------------SSSSSS----------------------------------S------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S-------S--S----
--------S-------------------------------------S---------------------------------
---S-----------------------------------------------S---------SSS---S---------S--
-----------------S--S-----------------------S---------S-S-------S-S--S----S-----
----------S------S------------S-S--------------------------S---S--------------S-
-------SS----SSS-----------------------------S------------------------S---------
----------------------------------------------S------------------S--------------
------------------------S-------------S-----------------------------------------
------------------------S-------------------------------------------------------
------------S----------------------------------------------------------------S--
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------SS----------------------
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>forward_2777
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-------------------------------------GAGTGCAATTCCCTCCTGCT-----------------------
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>reverse_4295
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------------------------------------------------------TGTCCAGATGAATAGGCCGG------
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