>input_sequence_58228
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----AACTTCCGCAGACGACCCCCACGGAGGCGGCTCCTCCTGGCCCTCCTACTCTCTCGCACACTCCGT---------T
TCCTTTCCTTCCCCCGAAAGCTCGTATTTTTAGCCATCTCTCGACCCAGCGGAGCTCTCTCTCTCGCTCGCTCTCCCTCT
CTCGCCATGGCCAAGAACACATGCAAGCTCTGCTGCCGCCGCTTCGCCAGCCCCCGCGCCCTCGCCGGCCACATGCGCTC
CCACTCCATCAAGGTCGCCCGGTC---GCAGCAGATCTCATCGGCCTCCTCCGCCTCCACCTCCCTCGCGGCCGGGGACG
GCGACGACGCCAG---------------GATGGCCATCCAGGCCCACGTGCTCCGCGGCAAGCCCAAGCGGAGGGCGCGC
CTCGCCGAGTCCGACTTCTCGGATCGCGAGAGCGAGGCGGAGTACCCGTCGCAGTCGCCGGGCGCCAAGCGCGTGCATGG
CGGATCGC------GCGACGCCGAGCCGGTGAGCTCCGTGTCCGACGCCGCCACGCCGGAGGAGGACGTCGCGCTGTCCC
TCATGATGCTCTCCCGCGACTCCTGGCC----------CGCGGTGGCGGCGTGGACGCCGTCCTCCTACCGCGTCGCCGA
CTCCGACGACGGAAGCGACGGCGGCGGAGAGGCCGCGCCCGCGCCACCGGCTGCGGCCGAGCAGAAGCGGACGCGGTTCC
AGTGCCCGGCGTGCAAGAAGGTGTTCCGATCGTACCAGGCGCTGGGCGGGCACCGCGCCAGCCACGTCCGCGGCGGCAGG
GGCGGCTGCTGCGCGCCCCCGCTGAACCCG---CCGCCGCCGCCGCCTCCCGCTTCCACCCACCTGCAGCCATTGCCGGA
ATGCGAGGAGGGCACGAAGCC------TCATCCGCAC------GAGTGCCCCTGCTGCTCCCGCGTGTTCGCGTCAGGGC
AGGCCCTCGGCGGCCACAAGCGGTCCCAGCTCTGCCCAGGCGCCGCCGCCGTG------------GCCGATCA---TCCC
GCCGCCGCGATGAAAAGCCTGGGCCTCATTGATCTGAACCTCCCGGCGCCCTTCGAGGACCTGGAGGTCTCCGCCGTGTC
AGATCCCTTCCTCGCGGCAAGGCCAGGCCACTGAAAGCAAGCAG-------------AGCAAGCAAGCAATCCGGCGTGC
TTTTCCTTTCGGTCGGTCAGTTGGTTGATTCCAGTGGAGACAGATGATCCGGGCTTGTAATTGCTAGCAAGAAA------
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------------------------------
>chr2D_1_TraesCS2D01G410300
TGTCATGGGTTTCGAGCGAGTTTGATACGGCGACAGCGTAGGCGCCGTAGTACTAGGACGTGTTGCTTGCTGATCGTCGC
CTGAACCGTACGCCGAGATCTCTGGCTCCAACCACCTCCCGCTCCGGTGTAATCATAG-TAATAATTTAATTAATGGGAA
AGTTGTGAAAGCTGTGGTGCACTGTAAGTGACCCTTGCGTGCCATTACCACCTGATTTAGATCCCCACCGCCGATTAATT
TGCCACTTATCACCAATGCCCCGAGCCGCACTCCACCTTGCAATGCCAATGCATGCACTTTGCTGTTCGCTCTCCTTCTT
GTCAACTACTCATTGTCCCCATCACCCCATTCCCAGCTCTTTATCTACCCTACTCAACTCACTGATCGCCTGCACCACCA
GAGCAAGTCTACAAGGTGGAGGACGGAAGCAAAGGGAGCAGCGTCACCCTTGATTTGGATGGGG----ATATGGGGTG--
--GCGGCCTCACAAGGAAAGCATTGGTCATATTGCGCAAGTCCCAT-AAAAGGGAGAATTGACAGCCATGTGGTGATGCT
AATAG------ACATCTTCCAAAGTGTATAGAGAGAGTAATAATATCCGTCCGGTATTCTTGCGTTGACAGTAGGAGGTA
GGCACATACCATCTCACATGG------------------------------AAAGTTATCAAGCACAACTTATGCAAAAT
CGTTCAAGTATGGTAACAAATAATGGCTTGATTCTTGCG---ACCAAAAGTGTAATTCCG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TG---CAATGCAACCATGCTAAACAATGCGCCATGGACCACAACGCGTTGTGCCAGCAGGGC
ATTAGATTCAGTACATTTCTTTCGTACTG------CTAATATACTTACG-ATCTACCATTAATTCAGAACAATAACTCGG
CAAAAAAAAATTGATTTCTACAGAAC----AATACCAATGGCA-----------TAATAAGTGGAGAATACGGGGAGCCA
TCCAGAAAAGA----GAGGGGGCAAAAGGAAAAGAATGGAATAAAAGGCGGAAG--------CTTGGCAGTTCCGCGATA
TTCCAACTTCCGCAGACGACCCCCACGGAGGCGGCTCCTCCTGGCCCTCCTACTCTCTCGCACACTCCGT---------T
TCCTTTCCTTCCCCCGAAAGCTCGTATTTTTAGCCATCTCTCGACCCAGCGGAGCTCTCTCTCTCGCTCGCTCTCCCTCT
CTCGCCATGGCCAAGAACACATGCAAGCTCTGCTGCCGCCGCTTCGCCAGCCCCCGCGCCCTCGCCGGCCACATGCGCTC
CCACTCCATCAAGGTCGCCCGGTC---GCAGCAGATCTCATCGGCCTCCTCCGCCTCCACCTCCCTCGCGGCCGGGGACG
GCGACGACGCCAG---------------GATGGCCATCCAGGCCCACGTGCTCCGCGGCAAGCCCAAGCGGAGGGCGCGC
CTCGCCGAGTCCGACTTCTCGGATCGCGAGAGCGAGGCGGAGTACCCGTCGCAGTCGCCGGGCGCCAAGCGCGTGCATGG
CGGATCGC------GCGACGCCGAGCCGGTGAGCTCCGTGTCCGACGCCGCCACGCCGGAGGAGGACGTCGCGCTGTCCC
TCATGATGCTCTCCCGCGACTCCTGGCC----------CGCGGTGGCGGCGTGGACGCCGTCCTCCTACCGCGTCGCCGA
CTCCGACGACGGAAGCGACGGCGGCGGAGAGGCCGCGCCCGCGCCACCGGCTGCGGCCGAGCAGAAGCGGACGCGGTTCC
AGTGCCCGGCGTGCAAGAAGGTGTTCCGATCGTACCAGGCGCTGGGCGGGCACCGCGCCAGCCACGTCCGCGGCGGCAGG
GGCGGCTGCTGCGCGCCCCCGCTGAACCCG---CCGCCGCCGCCGCCTCCCGCTTCCACCCACCTGCAGCCATTGCCGGA
ATGCGAGGAGGGCACGAAGCC------TCATCCGCAC------GAGTGCCCCTGCTGCTCCCGCGTGTTCGCGTCAGGGC
AGGCCCTCGGCGGCCACAAGCGGTCCCAGCTCTGCCCAGGCGCCGCCGCCGTG------------GCCGATCA---TCCC
GCCGCCGCGATGAAAAGCCTGGGCCTCATTGATCTGAACCTCCCGGCGCCCTTCGAGGACCTGGAGGTCTCCGCCGTGTC
AGATCCCTTCCTCGCGGCAAGGCCAGGCCACTGAAAGCAAGCAG-------------AGCAAGCAAGCAATCCGGCGTGC
TTTTCCTTTCGGTCGGTCAGTTGGTTGATTCCAGTGGAGACAGATGATCCGGGCTTGTAATTGCTAGCAAGAAAGATGGT
GCTCAGGCAGTAAGCCAAAAAGGTA---AAGAAAAGGGTTAAGAAAAAGAGAGAC-------------------------
---GGGTAGTTGTTTTTCCTCCTCCTTTTATTTTGCCTTCCTCGTGGAGCTAGCAGAAAATTGGATGCTGTAGTTCTCCC
TCAGCTCTGGTGTGTCTTTTTGTTTGTTTCAAGCTATGGAACAGAGGGAGTAGATTGGGCCAGCAAACAGAGCCAGCTAC
TAGTTATTGTTCTG---------TT----GCTTGATCTTGGTAGCATAGCAAGAAAATACTATCCTCAGAGAATGGAAAG
GGCAAAATTTAGCTGAACTGTTGCTGTCTGTTGCAGTCTCCAGCTGTTCTTGTTCCAAGTGTCGAT--------------
-------------------------------GCATCCTCGCACTCATTACTGACTAGT---------------AAAGCCA
TAAGCAACAGAATAGCAACAACACAAATGCATTGCAATGCAGGATCGGCCAAAAGCGTTGGTTGGTGGTTACATGACTTA
CGTCCACCATGCTTGCCCCGCCCTCGCCTGATCGGCGATCGCCTCCTTTCTCCCCTCTGCAGTTGTGCTCCTGCCCAC--
----CACCACCGCCTGCCTGCATTTCTCCCGCTGCTGCCTGGAGCAGCAGAAAGGGCCGCTGTACTTTCCTCCCCCTGTA
GCCCAGCCCACGTCTTGCTCGCTTCCCACCACATTCCCGTCCCCCCATACTGTGCTG-----------------------
----------------TGCATTGCATTGAATCCTGCACACAAAATGACCGTATATATATAATCAACAAATAAAGTGGCTC
GGAATAGTCG-TTTCAATCGCGGTACAG------CCATGAAGATTACCTACTCCATTGTTGTTGTACACTGTACAGTATC
TGTGTAGCTTTTCACCTTCAGGTCAGATTATTTTGGGACCTGGGTTTGTTGGATTGGAGCCTGGATCTCTCTGAAGAGGT
TTTTTTTTTAAGAAGATCTCTCTCAACAGGTGGGAGGCCTCTGCAACTGCAGCCGATTCTGCAGGAGCTGCTCTCCACGC
TTGGAGGTGGGTGGTTACGGCATGGGCCGT
>chr2B_1
TGTCATGGGTTTCGAGCGAGTCTGATACGGCGACAGCTTA---------GTACTACGACGTGCTGCTTGCTGATCGTCGC
CTGAACCGTACACCGAGATCTCTGGCTCCCACCACCTCCGGCTCCGGGGTAATCACAAATAATAATTTAATTAATGGGAA
AGTTGTGAAAGCTGTGGTGCACTGTAAGTGATCCTTGCGTGCCATTAGCAACGGATTTAGATCCCCACCGCTGATTAATT
TGCCACTTATCACCAATGCCCCGAGCCGCACTCCACCTTGCAATGCCAATGCATGCATTTTGCTGTTTGCTCTCCTTCTT
GTCACCAACTCTTTGTCCCCATCGCCCCATTCCCAGCCCTTTATCTACCCTACTCAACTCCCCGAGCGCCTGCACCACCG
GAGCAAGTCTACAAGGTGGAGGACGGAAGC-AAGGGAGCATCGTCACCCTTGATTTGGATGGATGGGAATATGGCCCGGG
TTGCGGCCTCACAAGGAAAGCATTGGTCATATTGCGCAAGTCCCATAAAAAGGAAGAATTGACAGCCATGTGCTGATGCT
AATAGTAATAGACATCTTCCATAGTATATATAGAGTAATAATGC------CCGGTATTCTCGCGCTGACAGTAGG-----
--CACATACTGTCTCACATGG------------------------------AAAGTTATCAAGCACAACTTATGCAAAAT
CGTTCAAGTATGGTAACAAATAATGGCTTGATTCCTCTTGCTACAAAAGAGTAAGGGCATGTACAATGGTTGATAGGACA
GTCTTATCTTAAGTCTTGCATGTAATTTAGAGATGACAAAAAAATATGTCTACAATGGGTTATATCTTAGCCTTATCTTC
AATAACTAGTTATTCCTTAAAATATGGTGAGACAAATTGTGCTAAGAGATCATCTCTTGTCTTATCTTAAATAAGAGAAG
ACAAGCCTTTTCTTATGAGTTCTCTCTCCTCCACCTCACCATTTATCCTACGTGGCACTTCTAAGATAGCACCATTGTAC
ATGCCCTAAGTAATTCTTTG---CAGTGCAACTATGCTAAACAATGAGCCATGGACCACA-CGCGGTGTGCCAGCAGGAC
ATTAGATTCAGTACATTTCTTTCGTACTG------CTAATATACAGTACAATCTACCATTAATTCAGAACAATAACTCGG
CAAAAAAAAA-TGATTTCTACTACAGAGCAGATACCGATGGCA-----------TAATAAGTCGAGAATGCGGGGAGCCG
TCCAGAAAAGA----GAGGGGGCAAAAGGAAAAGAATGGAATAAAAGGCGGAAG--------CTTGGCAGTTCCGCCATA
TTCCAACTTCCCCAGACGACCCCCACGGAGGCGGCTCCTCCTGGCCCTCCTACTCTCTCGCACACTCCGT---------T
TCCTTCCTCCA-----AAAGCTTGTATTTTTAGCTATCTCTCCACCCAGCGGAGCTCTCTCGGTCTCT--CTCTCCCTCT
CTCGCCATGGCCAAGAACACATGCAAGCTCTGCTGCCGCCGCTTCGCCAGCCCCCGCGCCCTCGCCGGCCATATGCGCTC
CCACTCCATCAAGGTCGCCAGGTC------GCAGATCTCATCGGCCTCCTCCGCCTCCACCTCCGTCGCGGCCGGGGACG
---ACGACGCCGCCGCCGACGCCAGGATGATGCCCATCCAGGCCTACGTGCTCCGCGGCAAGCCCAAGCGGAGGGTGCGC
CTCGCCGAGTCCGACTTCTCAGATCGCGAGAGCGAGGCGGACTACCCCTCGCAGTCGCCGGACGCCAAGCGCGTGCATGG
CGGATCGC------GCGACGCGGAGCCGGTGAGCTCCGTGTCCGACGCCGCCACGCCGGAGGAGGACGTCGCGCTGTCCC
TCATGATGCTCTCCCGCGACTCCTGGCC----------CGCG---GCGGCGTGGCAGCCGTCCTCCTACCGCGCCGCCGA
CTCCGACGACGGAAGCGACGGCGGCGGAGAGGTCGA------GCCCCGG---GCGGCCGAGCAGAAGCGGACGCGGTTCC
AGTGCCCCGCGTGCAAGAAGGTGTTCCGATCGTACCAGGCGCTGGGCGGGCACCGCGCCAGCCACGTCCGCGGCGGCAGG
GGCGGCTGCTGCGCGCCCCCGCTCAACCCG---CCGCCGCCT---CCTCCTGCTTCCACCCACCTGCAGCCATTGCTGGA
ATGCGAGGAGGGCACGAAGCC------GCATCCGCAC------GAGTGCCCCTGTTGCTTCCGCGTGTTCGCGTCAGGCC
AGGCCCTCGGGGGCCACAAGCGGTCCCAGCTCTGCCCAGGCGCCGCCGCCGTGGCCGCGCCTGGCGCCGATCA---TCCC
GCCGCCGCGATGAAAAGCCTGGGCCTCATTGATCTCAACCTCCCGGCGCCCTTCGAGGACCTGGAGGTCTCCGCCGTGTC
AGATCCCTTCCTCTCCGCAAGGCCAGGCCACTGAAAGCAAGCAGAGCAGAGCGACGAAGCAAGCAAGCAATCCGGCGTGC
TTTTCCTTTCGGTCGGTTGGTTGGTTGGTTCCAGTGGAGATAGATGATTCGGGCTTGTGATTGCTGGCAAGAAAGATGGT
GCTTAGGCAGTAAGCCAAAAAGGTA---AAGAAAAGGGTTAAGAAAAAGAGAGACATCTGTCTGTCTATGCTCTTGCTCG
GGTGGGTAGTTATTTTTCCTGCTGTAGTTCTC-----------------------------------------TTCTCCC
TCAGCTCCGGTGTGTCTTTTTGTTTGTTTCAAGCTATGGAACAGAG----TAGATCGGGCCAACAAACTGAGCCAGCTAC
TACTAGTTATTGTTTTCTTTGGCTT----GCTTGATCTTGGTAGCCTAGCAAGAAAATA--------------------G
GGCAAAATTTAGCTAAACTGTTGCTGTCTGTTGCAGTCTCCAGCTGTTCTTGTTCCAACTGTCCATCGCATAGCATGGCA
TGGGACTTGGCTTCGCCAAGCAACCGATGATGCATCGTCGCACTCATTACTCGCTAGCAGGCAGGCAGTAGTAAAAGCCA
TAAGCAACAAAATAGCAACAA-------------CAATGCAGGATCGGCCAGAGCGTTGTTGGGTCGATCGGT-------
------------------------------------GATCGCCTCCTTTCTCTGCTCTGCTCTTGTGCTCCTGCCCACCA
CCAACACCACCACCTGCCTGCATTTCTCCTGCTGC---CTGGAGCAGCAAAAAGGGCCGCTGTACTTTCCTCCCCCTGTA
GCCCAGCCCACGTCTTGCTCGCTTCCCACCACATTCCCAT-CCCCCCTACTGTGCCGTGCGGTCGGCCCCCCACCGCCGT
CCGGCACAAAACAAATTGCATTGCATTGAATCCTGCTCACCAAATGACCGTCTCGG------CAACAAATAAAGTGTCTC
CGAATGTTTGCTTTCAATCGCGATACAGAGCTAGCCATGAAGATTACCTACTGCGTTGTTGTTGTACACTGTACAGGATC
TGTGTAGCTTTTCACTTTCAAGTCAGATTTTTTTGGGAGCTGAATTTGTTGCATTGGAGCTCGGATCTCTCTCAACAGT-
------------------------------TGGGAGGCCTCTGCAACTGCAGCCGATTCTGCAGGAGCTGCTCTCCACGC
TTGGCGGTGGGTGGTTACGGCATGGGCCG-
>chr2A_152
--------------------------------------------------------------------------------
------------------------------------------------------------------------AATGGGAA
AGTGGTGAAAACAGTGGTGCAGTGTACGTGACCCTTGCGTGCCATTACCACCGGATTTAGATCCCCACAGCTGATTAATT
TGCCACCTATCACCAATGCCCCAAGTCACACTCCACCTTGCAGTGCCAATGCATGCACTTTGCTGTTCGCTCTCCTTCTT
GTCACCCACTCCTTGTCCCCATCACCCCATTGTGAGCTCTTTATCTACCCTACTCAACTCACTGATCGTCTGCACCACCG
GAG--------CAAGGTGGAGGATGGAAGC-AAGGAAGCATCGTCGCCCTTGATTTGGATGGATGGGAATATGGGGTG--
--GCGGCCTCACAAGGAAAGCATTGGTCATATTGCGCAAGTCCCAT-AAAGGGAAGAATTGACAGCCATGTGCCAAATAT
--------------------------------------------------------------------------------
--CACATACCATCTCACATGGCAAGTTATCAAGCACAAATCTCGCAAAAAAAAAGTTATCAAGCACAACTTATGCAAAAT
CGTTCAGGTATGGTAGCAAATAATGGCTTGATTCCTGCTACTACCAAAAGTGTAATCCCG--------------------
--------------------------------------------------------------------------------
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------------------TGCAACAATGCAACCGTGCTAAACAATGCGGCATGGACCACAACGCGGTGCGCCAGCAGGGC
ATTGGATTCAGTACATTTCTTTCGTGCTGCTGCTGCTAATATACTTACG-ATCTACCATTAATCCAGAACAATAACTCGG
CAAAAAAATTGATTT-----CTACAGAGCAAATACCAATGGCATGGCATAGTAGTAATAAGTGGAGAATACGGGGGGCCG
TCCGGGAAAGAGAGGGAGGGGGCGAAAGGAAAAGAATGGAATAAAAGGCGGAAGGAAGGGAGCTTGGCAGTTCCGCGATA
TTCCAACTTCCGCAGACGAGCCCCGCGGAGGCGGCTCCTCCTGGCCCTCCTACTCTCTCGCACACTCCGTTTCCTTCCCT
TCCTTCCTCCC-----AAAGCTCGTATTTTTAGCCATCTCTCGGCCCGGCGGAG----------------------CTCT
CTCGCCATGGCCAAGAACACATGCAAGCTCTGCTCCCGCCGCTTCGCCAGCCCGCGCGCGCTCGCCGGCCACATGCGCTC
CCACTCCGTCAAGGTCGCCCGGCC---GCAGCAGATCTCGTCGGCCTCCTCCGCGTCCACCTCCGTCGCGGCCGCGGACG
---ACGACGCCAG---------------GATGGCCATCCAGGCCCACGTGCTCCGCGGCAAGCCCAAGCGGCGGGCGCGC
CTCGCCGAGTCCGACTTCTCGGATCGCGAGAGCGAGGCGGAGTACCCGTCGCAGTCGCCTGGCGCCAAGCGCGTGCATGC
CGGATCGC------GCGACGCCGAGCCGGTGAGCTCCGTGTCCGACGCCGCCACGCCGGAGGAGGACGTCGCGCGGTCCC
TCATGATGCTCTCCCGCGACTCCTGGCC----------CGCGC------------CGCCGCCGTCCTACCGCGCCGCCGA
CTCCGACGACGC---------------AGAGGCCGCACCCGCGCCCCCG---GCGGCCGAGCAGAAGCGGACGCGGTTCC
AGTGCCCGGCGTGCAAGAAGGTGTTCCGATCGTACCAGGCGCTGGGCGGGCACCGCGCGAGCCACGTCCGCGGCGGCAGG
GGCGGCTGCTGCGCGCCCCCGCTCAGCCCG---CCTCCCGCG------------TCCACCCACCTGCAGCCATTGCCGGA
ATGCGAGGAGGGCACGAAGCCGCCGCCGCATCCGCAC------GAGTGCCCCTGCTGCTCCCGCGTGTTCGCGTCGGGCC
AGGCCCTCGGCGGCCACAAGCGGCCCCAGCTCCGCCCAGCCGCCGCCGCCGTGGCCGC------------TCA---TCCG
GCGGCCGCGATGAAAAGCCTGGGCCTCATTGATCTGAACCTCCCGGCGCCGTTCGAGGACGTGGAGCTCTCCGCCGTGTC
AGATCCCTTCCTCGCGGCAAGGCCAGGCCACTGAAGCAAGCAG------------------AGCAAGCAATCCGGCGTGC
TTTTCCTTTCGGTCGGTCGGTGGGTTGGTTCCAGTGGAGATGGATGATCCGGGCCTGTGATCGCTGGCGAGAAAGATGGT
GCTCAGGCAGTAAGCCAAAAAGGTAAAGAAGAAAAGGGTTAAGAAAAAGAGAGGCATCCGTCTA----------------
--TGGGTAGTTATTTTTCGTGCTGTAGTTCTC-----------------------------------------CTCTCCC
TCGGCTCTGGTGTGTCTTTTTGTTTGTTTCAAGCTACGGAACAGAG----TAGATCGGGCCAGCAAACAGAGCCAGCTGC
TGCTGCTAGTTAGTATTGTTTCTCTTTTGGCTCGATCTTGGTAGCCTA-CAAGAAAATA--------------------G
GGCAAAATTTAGCTAAACTGTTGCTGTCTGTCGCAGTCTCCAGCTGTTCTTGTTCCAACTGTCTATCGCAT---------
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>chr6A_1146
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------------------------------------------------------------------------------CT
CTCGCCATGGCAAAGAACACATGCAAGCTCTGCTTCCGCCGCTTCGCCAGCCCCCGCGCCCTCGCAGGCCACATGCGCTC
CCACTCCGTCCGCAACCCGGCCGCGAAGCAGCAGATCTCATCGGCGTCCTCCGCGTCCACCTCCTTCACCGCCGCCGCCG
ACGGCGACGTCAGCTTCAAGAAGCCCCTTCCAAT---------CTACGCGCTCCGGGAGAATCCCAAGCGCAGCCTGCGC
GTCACCGATGTCGCCTTCTCGGATCGCGAGAGTGAGGCCGAGTCCACCC------CGCCGCACCCCAAGCGCGCGCACGC
CGCCGCTGCCGGGGGCGAGACCGAGCCGCTGAGCTCGGTGTCGGACGCAGCCACGCCGGAGGAGGACGTGGCGCTGTCCC
TCATGATGCTCTCCCGCGACTCCTGGCCTTCGACGGGGCGCGGCTACGGCGA-------------------CGGCGACTA
CTCGGACGACGGGAGCGACGGCGGTTACACGCTCCCCGCTCCCGATCCG---GCGCCGGTGGAGAAGCGCACACGGTTCC
AGTGCGGCGCGTGCAAGAAGGTATTCCGTTCCTACCAGGCTCTCGGCGGCCACCGCGCCAGCCACGTGCGCGGCGGCAGG
GGCGGCTGCTGCGCGCCTCCCATCGCTCCC---CCTCCTCCT---CCTCCGCAGCCGCTGGCACCGGCGCCATTGATGGA
ACGCGAGGGGGACGAGGACATGGACGGGAAGGGGTCGCCACGGGAGTGCCCCTACTGCTACCGCGTGTTCGCCTCCGGGC
AAGCTCTTGGTGGGCACAAGAGGTCCCATGTTTGCTCCGCCGCCGCCGCCGCAGCACAGGCGCATGCAGCCGCCGCTCCT
CCGGCGCCGATCAAAGCCTTTGGCATGATCGATCTGAACATCGCGCTGCCGTTCGAGGATGTGGAGCTCTCTGCCGTGTC
AGATCCC-------------------------------------------------------------------------
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>chr6D_1146
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------------------------------------------------------------------------------CT
CTCGCCATGGCAAAGAACACATGCAAGCTCTGCTTCCGCCGCTTCGCTAGCCCCCGCGCCCTCGCAGGCCACATGCGCTC
CCACTCCGTCCGCAACCTGGCCGCGAAGCAGCAGATCTCATCGGCGTCCTCCGCGTCCACCTCCTTCACCGCCGCCGCCG
ACGACGACGTCAGCTTCAAGAAGCCCCTTCCAAT---------CTACGCGCTCCGGGAGAATCCCAAGCGCAGCCTGCGT
GTCACCGATGTCGCCTTCTCGGATCGCGAGAGTGAGGCCGAGTCCACCC------CGCCGCACCCCAAGCGCGCGCACGC
CGCCGCTGCGGGGGGCGAGACCGAGCCGCTGAGCTCGGTGTCCGACGCAGCCACGCCGGAGGAGGACGTGGCGCTGTCCC
TCATGATGCTCTCCCGCGACTCCTGGCCGTCGATGGGGCACGGCTACGGCGA-------------------CGGCGACTA
CTCGGACGACGGGAGCGACGGCGGTTACACGCTCCCCGCCCCCGATCCG---GCGCCGGTGGAGAAGCGTACACGGTTCC
AGTGCGGCGCGTGCAAGAAGGTATTCCGTTCCTACCAGGCTCTCGGCGGTCACCGCGCCAGCCACGTGCGCGGCGGCAGG
GGCGGCTGCTGCGCGCCTCCCGTCGCTCCTCCTCCTCCTCCT---CCCCCGCAGCCGCTGGCACCGGTGACATTGATGGA
ACGCGAGGGGGACGAGGACATGGACGGGAAGGGGTCGCCACGGGAGTGCCCCTACTGCTACCGCGTGTTCGCCTCCGGGC
AAGCTCTTGGTGGGCACAAGAGGTCCCACGTTTGCTCCGCGGCCGCCGCCGCAGCACAGGCACATGCAGCCGCCGCTCCG
CCGGACCCGATCAAAGCCTTTGGCATGATCGATCTGAACATCGCGCTGCCGTTCGAGGAAGTGGAGCTCTCTGCCGTGTC
AGATCCC-------------------------------------------------------------------------
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>chr6B_1146
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------------------------------------------------------------------------------CT
CTCGCCATGGCAAAGAACACATGCAAGCTCTGCTTCCGCCGCTTCGCTAGCCCCCGCGCCCTGGCAGGCCACATGCGCTC
CCACTCCGTCCGCAACCTGGCCGCGAAGCAGCAGATCTCATCGGCGTCCTCCGCGTCCACCTCGTTCACCGCCGCCGCCG
ATGACGACGTCAGCTTCAAGAAGCCCCTTCCAAT---------CTACGCGCTCCGGGAGAATCCCAAGCGCAGCCTGCGT
GTCACCGATGTCGCCTTCTCGGATCGCGAGAGTGAGGCCGAGTCCACCC------CGCCGCACCCCAAGCGCGCGCACGC
CGCCGCTGCAGGGGCCGAGACCGAGCCGCTGAGCTCGGTGTCTGACGCTGCCACGCCGGAGGAGGACGTGGCGCTGTCCC
TCATGATGCTCTCCCGCGACTCCTGGCCATCGATGGGGCGCGGCGACGGCGA-------------------CGGCGACTA
CTCGGACGACGGGAGCGACGGCGGTTACACGCTCCCCGCTCCCGATCCG---GCGCCGGTGGAGAAGCGTACACGGTTCC
AGTGCAGCGCGTGCAAGAAGGTATTCCGTTCCTACCAGGCTCTTGGCGGCCACCGCGCCAGCCACGTGCGTGGCGGCAGG
GGCGGCTGTTGCGCGCCTCCCGTCGCTCCC---CCTCCTCCT---CCTCCGCAGCCGCTGGCACCGCTGCCATTGATGGA
ACGCGAGGGGGACGAGGACATAGACGGGAAGGGGTCGCCACGGGAGTGCCCCTACTGCTACCGCGTGTTCGCCTCCGGGC
AAGCTCTTGGTGGGCACAAGAGGTCCCATGTTTGCTCCGCCGCCGCCTCTGCAGCACAGGCGCATGCAGCCGCCGCTCCG
CCGGACCCGATCAAAGCCTTTGGCATGATCGATCTGAACATCGCGCTGCCGTTCGAGGATGTGGAGCTCTCTGCCGTGTC
AGATCCC-------------------------------------------------------------------------
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------------------------------
>SNPs
---------------------S---------------S--SSSSSSSSS------S------S-----------------
-----------S-----------------S---------S-------S-------S-S----------------------
----------------------------------------------------S------------------S--------
--------------------------------------------------------------------------------
----S-S----S-------------------------------------------------------------------S
------------------------------S---------S---------------------SS----------------
-----------------------------------------------------S------------------S-------
---------------------S---S----S----SSSS-SSSSSSSSSS----------S---S----------SSSSS
SS------------------------------------------------------------------------------
----------------------------------S---S-----------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
----------S----------SSS-S-----------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-SSS-SSSSS---------------------------------------------SS--S--SS----------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S----------S------------------S------
------------------------------------S--------S---SSS----------------------------
--------------------------------------------------------------------------------
-----------------------S------------------SSS-----S-----------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S--------S------------S-----------------S------S--------------
--------------------------------------------------------------------------------
-----------S--------S--SSSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
----------------------------------------------SSSS-----S------------------------
--S-SS-----S-S-------------------------------S-------------SSSSSSSSSSSSSSSSSSSS-
--------------S-------------------------------------------S----S----------------
------------------------------------S--------------SS----S----------------------
---------S-----------SSSSSSSSSSSSS-----------------S-SSSS-SSSSS-SS-S-SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------SS------SS------------------
-----------S-----------------S-----SSS-----------S------------------------------
--------------------------------------S-S-----S--------S------------------------
------------------------------------S---S----------S-SSSSSSSSS--------------S---
S----SS-S-------------S-----------------------------S-S---------------------S---
---------------S----S--------S--------S---SS-------S--------SS----------S--S--SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------
----S------------------------S
>forward_41
---------------------TTGATACGGCGACAGCGTAG---------------------------------------
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>reverse_1448
--------------------------------------------------------------------------------
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-------CTTCCCCCGAAAGCTCGTAT-----------------------------------------------------
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>forward_1446
--------------------------------------------------------------------------------
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------------------------------------------------------------------TCGCACACTCCGTT
TCCTTT--------------------------------------------------------------------------
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>reverse_2757
--------------------------------------------------------------------------------
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------------------------------------CTTCCTCGTGGAGCTAGCAG------------------------
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------------------------------
