>input_sequence_58200
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----------------------------------------------TCCCAT-------TTCTTCCTCTTTC--------
----CTCTCCCTCTCTCTCTCTTACACAAGTTGCTGCTGAGTTGGTGCTGTCCTTGTTCCTGGACGGACACATCCGACAT
GTCGACGGCGGTGGCGCGGCCCTACGGCGGCGGCTTCCCCGGATCGGGGAGGGCCAAGGGGGACGAGCTGCTCGGCAAGA
AGATGAGCGACGGGTTCTTCATCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGAGGTGCTCACGGAGAGCTCC
TCCATCGGCGCGCCGTCGCCGTCGAGCTCCTCCATCGGCGAGGACTCCTCGTCGGAGGTTGGCGGCGACGGGGAGGACGA
GGAGGTGGAGAGCAAGCTCAAGGAGGAGCCCGGGCTCGGGTGCCTGGACGCCCTGGAGGACTCCTTGCCCATCAAGTGAG
TCAGACGCTTCTCTGAATATGCTTCC-TTTTGCTTGCCCAAAATGAGGAAAAAAAGAAGATCTTTTTTGGGGATTCTTCG
ATCCATTTGCAAAAGCGCGAGTAGTAGGAAATTCGTATGAGGTTT-------TTTAGAGATCACGAGTTGTCATCGGTTC
CTCAGTTGCAATTGATTTTGATCTAGAGAGGAAGA--GGAGCATGGAAA-TTGATCCTTCGTTTTCGTGT-GATTTTGCA
GGAACGGGCTGTCGAGCTTCTACGCCGGAAAGTCGAAGTCATTCACCAGCCTCGCGGAGGCGGCGGCGCGGGACGCCGTG
AAGGAGCTCGCCAAGCCGGAGAACCCCTTCAACAAGCGCCGCCGCATCCTGGCCACCTGGTCCCGCCGCGCCTCCTGCAG
CTCGCTGGCCACCGCCACCTACCTGCCCCCGCTCCTCGCCCCCGACCACGCCCTCCCCGAGGGGGAGGAAGGCGAGGAGG
ACGACGACTCCGACTCCGGCTCCGACGAGCAGCACCGCGGCAAGAACGGGTGGGAGGCACCGGCATTGCCGCCCCCGAGG
CTGAGCGTGAACACCCAGATGGGCGCGGCGGCGGCGAGGAAGGGCGGCAGCTTCAGATCGCCGAGGTCCTACTCGCTCTC
AGATCTTCGAAATGGCGGCGATGCGAGATACAACCAGTAGCTGCGAATTCGCAGCCATTGATCTGTCTTGTGTCCCGTAG
ATCTGTTACTACTACTTACTCCTTAATTATATATAAGCAAGTAATCGCAAGAGCATGTGTAA------------------
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>chr5A_1_TraesCS5A01G277500
CCATATAAAAGTTCACGATGTCATAGTTTTCTAGATGTACACGTAACCCTAAACTCTATCGACGCACAATATAGCATGGG
CAGATTAGTAGAAGTCATTATTAACTCACGGAACCATCCGTTGATCTAGGTTACTGACATGTTCTCACACTCCAGCGAAT
GTTTGTTGGCACGAAAGTTTGAATCATTCGAGA-GTTTCTTGAGAGATAATACCAAATTAAAGTTGACGATACCATAGGT
TTTCGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGTGCAAGTAACCCTAAA
CCCTACCGACATGCGATATAACATGGACATAGTAGTAAAAGGTCATTATTAATTAACTAACGGAACATCCCTCGCTCTAG
GTTATA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GACATGTTCTCACACTCTAGCGGATGTTTGTCGGCATGGGGATTCGAATCGTTCAAGAGGTTTCTTGAGAGAGATAAT
ACGAAATTAAAGTTGATGACGCCAAAGTTTCCTCAACGTACACATATGCCTAAACCCTATCGACAAACGATATAACATGG
ACAAATTAGTACAAAGTCATGATTAACTCCCAAAACCACCCCCTCGCTCTAGGTTATCGACATGTTCAAACACTCCAACG
GTTGTTTGTTGGTGTGCAAGTTTGAATCG-TTCGAGAGGTTTCTTGAGAGAGATACTACCAAATGAAAGTTGATGACACC
AAAGTTTCCCCGACGTACACGTACCCCTAAACCCCACTGACACACCATATAGCAAGGGCAAATTAGCACAAGGTCATGGT
TAACCCACAGAACCATCCCTGATTCTAGG---------------------------------------------------
--------------------------------------------------------------TTATCGACCGGTTCTTAC
ACTCGAGCGGATGTTTGTTCGACACAAAAGTCCGAATAGTTCTAGAGGCATCTAGAAGGGGCTTGTGTACAACACACTTC
CGGCAGTAGAGTGGTGCATTGGGTTGTGCTAGGCCGCAGAGGATCCTGGCGGTGGTGGGCGCCCATGCCGTGAGCCTACA
AAGACCCCGCCTACCCAACTCCTCTCCTGTCGTTGCTCTTATCTTATCCCAT-------TTCTTCCTCTTTC--------
----CTCTCCCTCTCTCTCTCTTACACAAGTTGCTGCTGAGTTGGTGCTGTCCTTGTTCCTGGACGGACACATCCGACAT
GTCGACGGCGGTGGCGCGGCCCTACGGCGGCGGCTTCCCCGGATCGGGGAGGGCCAAGGGGGACGAGCTGCTCGGCAAGA
AGATGAGCGACGGGTTCTTCATCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGAGGTGCTCACGGAGAGCTCC
TCCATCGGCGCGCCGTCGCCGTCGAGCTCCTCCATCGGCGAGGACTCCTCGTCGGAGGTTGGCGGCGACGGGGAGGACGA
GGAGGTGGAGAGCAAGCTCAAGGAGGAGCCCGGGCTCGGGTGCCTGGACGCCCTGGAGGACTCCTTGCCCATCAAGTGAG
TCAGACGCTTCTCTGAATATGCTTCC-TTTTGCTTGCCCAAAATGAGGAAAAAAAGAAGATCTTTTTTGGGGATTCTTCG
ATCCATTTGCAAAAGCGCGAGTAGTAGGAAATTCGTATGAGGTTT-------TTTAGAGATCACGAGTTGTCATCGGTTC
CTCAGTTGCAATTGATTTTGATCTAGAGAGGAAGA--GGAGCATGGAAA-TTGATCCTTCGTTTTCGTGT-GATTTTGCA
GGAACGGGCTGTCGAGCTTCTACGCCGGAAAGTCGAAGTCATTCACCAGCCTCGCGGAGGCGGCGGCGCGGGACGCCGTG
AAGGAGCTCGCCAAGCCGGAGAACCCCTTCAACAAGCGCCGCCGCATCCTGGCCACCTGGTCCCGCCGCGCCTCCTGCAG
CTCGCTGGCCACCGCCACCTACCTGCCCCCGCTCCTCGCCCCCGACCACGCCCTCCCCGAGGGGGAGGAAGGCGAGGAGG
ACGACGACTCCGACTCCGGCTCCGACGAGCAGCACCGCGGCAAGAACGGGTGGGAGGCACCGGCATTGCCGCCCCCGAGG
CTGAGCGTGAACACCCAGATGGGCGCGGCGGCGGCGAGGAAGGGCGGCAGCTTCAGATCGCCGAGGTCCTACTCGCTCTC
AGATCTTCGAAATGGCGGCGATGCGAGATACAACCAGTAGCTGCGAATTCGCAGCCATTGATCTGTCTTGTGTCCCGTAG
ATCTGTTACTACTACTTACTCCTTAATTATATATAAGCAAGTAATCGCAAGAGCATGTGTAAGTGTCTA-AGCTAAATTC
GTCGTGTTCTTGTATCCGTCAGTTGGATCCCGTTGACCTCGCTCACCCGACCCGATGTACGCAGACATGTATGAACTGCT
CCGGCGAACTGAGTTCACCGAACTGATCCAACACCCCGGCCATCATTAACTAATGATGAACCGTCCTCAAGATAAGATTA
GTTAGTT---TAATGGCATTGCTCCCGATCCCTTTGTGTACAAAC-----ATATATACAATTTGTTGATCCAA-TTTGAT
TTGCTGGATAGGGGATCGCTCTCCGCCATGATTGCGCTACCACCAGGCAGGTCGGTAGGTCGCCCATGACCGGTGGTTGA
GCTATGCCTCGCCTTG------TGGGAGTATGAAA--TGGCTTGAAATGGGCACCAACGAGGAAGAATCAGACCCCT--A
ATCAATCCCAAGAAGAGAGAA-AGAAAGATGGCGCTTTTGCAGGTGGTAGTACTGGTA----ACTTTGTGCCTGGAAAGG
CAGATCCGGGCATCCATTTGCACGCTTCTTTCCCCGGCAATCTGCGCGGTGCGTAGATCTGTCACCACGGCGACAGTTTC
TCTTCCGTTTTTTCTAAGGAAAGTTGCGCCCCATGTTCGCGCCGAACGGGCGGCAAGAACAGGAACGGGTTACCACGTAC
ATAAACAAAACAAA----------CCGCTTGCTTTACCCCTAACACGACGTGGATCCATTGATTAATCTGGGGCTTGCTC
CGCTTGTCTATTCTCTCTTGGCCTGGGAGAAG-----TTGGTGAAACGTAGTAGCAGTAGTAGTAATAAATCGAGTAAAT
CATGGATCGCAATCACGGCGACAATGTCCCGTTTGGCATCCGAAGCTTTTAACCTTGCTCTCGCATTGTTTTCATACAGC
AGCGTCGGTGCGTCGCACGAGCTGGGCTTGTCTTGTGATGGCTCGCCTC----AACCATTCTTTTCTCCGGGATTTTGAT
CTCTCCCGGCGACAAGTCTCGCATTGTTTGTGTCACTGTGTGTGATGTGGAGGCCTACGCTGGTAC
>chr5D_1
CATAT-AAAAGTTCACGACATCATAGTTTTCTAGATGTACACGTAACGCTAAACCCTATCGACGCACAATATAGCATGGA
CAAATTAGTAGAA------ATTAACTCACAGAACTATCCCTTGATCTAGGTTATTGACAAGTTCTCATACTCCTGCGAAT
GTTTGTTGGCGCAATAATTTGAATCGTTCGAGAAGTTTCTTGAGAGATAATACCAAATTAAAGTTGACGATACCATAGTT
TTCATGACATACACGTAACCCTAAACCATAGTGGCACGCGATAGAACATGGACATGTTAGTAGAAGGTCATGATTAACTC
ATGGAACCATCTCACACTCTAGGTTATCGACATGTTCTCACACTCTAGCAGATGTTTGTTGCTGTGGGAGTTCCAATCGT
TCTAAAGGTTTCTTTAGAGAGATAATGCCAAATTAAAGTTATCGATGTCATAATTTTCTAAATGTACGTGTAACCCTAAA
CCTTGCCGACAAATGATATAACATGGACATATTAGTAAAAGGTCATG----ATTAACTAATGGAACAACCCTCACTCTAG
GTTATCGACACTGATGTTTGTTGGTGTGGGAGTCCGAATCGTTCAGGAGGTTTCTTTGGAGAGATAATACCAAATTAAAG
TTGACGACGTCATAGGTTTTCGGACGTACACGTAACCCTAAACCCTACCGACAAACGATATAACATGGACATCTAGGTTA
TCGACATGTTCTCACACACTAGCGGATGTTTGTTGGAGTCAGAGTTTGAATCGTTCGAGA-GTTTCGTGGGAGAGATAAT
ACCAAATTAAAGTTGACGACACTATAGTTTTTCGGACGTACACATAACCCTAAACCCTACCGACAAACAATAAAACATGG
ACATATTAGTAAAAGGTCATGATTAACTCACGAAAACAACCCATCGCTGTAGGTTATCGACATGTTCT--CACACTAACA
GATGTTTGTTGGCATGGATGTTCTAAACGTTTCTAGAGGTTTCTTGAGAGAGATACCACCAAACTAAAGTTGACGACACC
AAAGTTTT-CCGGCGTGCACGTACCCCTAAACCCCACCGACACACCATACAACACGGTCAAATTAGTACAAGGCA-----
----------AAACATCCCTGATTCCAGGGGAGCGGGATTGTCTGACGTACTGCCCCCTAACACGGGGCCACTGACATGT
GGGCCCTGGTCCACATGCCAGTGTGTCAACGGCACATCAGGGGAGCCGCGTCAGTTTCCAGGTTATCGACCTGTTCTTAC
ACTCGAGCGGATGTTTGTTCGACACGAAAGTTCGAATAGTTCTAGAGGCATCTAGAAGGGGCTTGTGTACAACACACTTC
CGGCAATAGAGTGGTGCATTGGGTCATACTTGGCCGCAGAGGATCCTGGCGGTGGTGGGCGCCCATGCCATGAGCCTACA
AAGACCCCGCCTACCCAACTCCTCTCCTGTCGTTGTTCTTATCTTATCCCATCACCCATTTCTTC-----------CTCT
CTCTCTCTCTCTCTCTCTCTCTTACACAAGTTGCTGCTGAGTTGGTGTTGTCCTTGTTCCTGGACGGACACATCCGACAT
GTCGACGGCGGTGGCGCGGCCCTT---CGGCGGGTTCCCCGGATCGGGGAGGACCAAGGGGGATGAGCTGCTCGGCAAGA
AGATGAGCGACGGGTTCTTCATCG---------AGGAGGAGGAGGAAGAGGAGGCGGAGGAGGTGCTGACGGAGAGCTCC
TCCATCGGCGCCCCGTCGCCGTCGAGCTCCTCCATCGGGGAGGACTCCTCGTCGGAGGTTGGCGGGGAAGGGGAGGACGA
GGAGGTGGAGAGCAAGCTCAAGGAGGAGCCCGGGCTCGGCTGCCTGGACGCCTTGGAGGACTCCTTGCCCATCAAGTGAG
TCAAATGCTTCTCTGAATATGCTTCTTTTTTGCTTGCCCAAAATGAGGAAAAAAAGATCTT-TTTTGGGGGGATTCTTTG
ATCCATTTGCGAAAGTGCGAGTAG---GAAATTCGTATGAGGTTTCATCTTGTCTAGAGATCACAGCTTATCATCGGTTC
CCCAATCGCAATTGA-TTTGATCGAGAGAGGAAGA--GGAGTATGGAAAATTGATCCTTCTTTTTCTTGGCGATTTTGCA
GGAACGGGCTGTCGAGCTTCTACGCCGGAAAGTCAAAGTCCTTCACCAGCCTCGCGGAGGCGGCGGCGCGGGACGCCGTG
AAGGAGCTCGCCAAGCCGGAGAACCCCTTCAACAAGCGCCGCCGCATCCTGGCCACCTGGTCCCGGCGCGCCTCCTGCAG
CTCGCTGGCGACGGCCACCTACCTGCCCCCGCTCCTCGCCCCGGACCACGCCCTCCCCGAGGGCGACGAAGGCGAGGAGG
ACGACGACTCCGACTCCGGCTCCGACGAGCAGCACCGCGGCAAGAACGGGTGGGAGGCGCCGGCATTGCCGCCCCCGAGG
CTCAGCGTGAACACCCAGATGGGCGCATCGGCGGCGAGGAGGGGCGGCAGCTTCAGGTCGCCGAGATCGTATTCACTGTC
AGACCTTCGAAACGGCGGTGATGCTAGTTATAATCAGTAGCTGCGAATTCGCAGCCATTGATCTGTCTTGTGTCCCGTAG
ATCTGTTACTACTACTTACTCCTTAATTATATATAAGTAAGTAATCGCAAGAGCATGTGTAAGTGTCTTGAGCTAAATTC
GTTGTGTTCTTGTATCCATCAGTTGGATCCCGTTGACCTCGTTCACCT-----GATGTACGCAGACATGTATGAACTGCT
CCGGTGAACTGA----ACCGAACTGATCCAACACCCTGGCCATCATTAACTAATGATGAACGATCCTCGAGATAAGATTA
GTTAGTTAATTAATGGCATCGCTCCTGATCCTTTCGCCCTGTACAAACATATATATACAATTTGTTGATGCAAATTTGAT
TTGCTGGATAGGGGATCCCCCTCCGCCATGATTGTG--CTACCAC--CAAGTGGGTAGGTCGCCCTA-----ATGCTTTT
GCCCTGTGGGAAGGGATGATAATGGTAGTATGAAATGTGCCTTGAGATGGCCACCAACGAGGAAGAATCAGACAGCCTAA
ATCAATCCCAAGAAGAAATAAGAGAAAGATGGCGCTTTTGCAGGT------ACCGGTA----ACTTTGTGCCTAGAAAGG
CAGATCCATGGGT--------ACGCTTCTTTCCCCGGCAATCTGCGTGGTGCGTCGATCTGTCACCACGGCGACTGTTTC
TGTTCCGTTTT--CTAAGAAAAGTTACGCCCCATGTTTGCGCCGAACGGGCGGCAAGAACAGAAACGGGTTGCCACGT--
-------------A----------CCGCTTGCTTTACCCC----------------------------------------
-GCTTG-----TCTCTCTTGGCCTTGGGGAAG-----TGGGTGAAACGTAGCAGTGAAG------ATAAATCAAGTAAAT
CATGGATCGCAATCACGGCGACAAGGTCCCATTTGGCATCTGAAGTTTTTAACCTTGCTCTCGCATTGTTTTCATACAGC
AGCGTCGGTGCGTCGCACGAGCTGGGCTTGTCTTCTGATGGCTCACCTTACTTAACCATTCTTTTCTCCGGGATTTTGAT
TTCTCTCGGCGACAAGTCT-----------------------------------------------
>chr5B_850
AAGGGGT-------------------------------------------------------------------------
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--------------------------------------------------------------TTGTGTACCACACACTTT
AGGCAGTAGTGTGGTGCATTGGGTTA---TAGGCCATAGAGGATCCTGGCCCTGGTGGGCGCCCATGCCGTGAGCCTACA
AAGACCCCGCCTACCCAACTCCTCTCCTGTCGTTGCTCTTATCTTATCCCATCACCCATTTCTTCCTCTTTCCTCCCTCT
CTCTCTCTCTCTCTCTCTCTCTTACACAAGTTGCTGCTGAGTTGGTGTTGTCCTTGTTCCTGGACGGACACATCCGACAT
GTCGACGGCGGTGGCGCGGCCCTT---CGGCGGGTTCCCTGGATCGGGGAGGGCCAAGGGGGATGAGCTGCTCGGCAAGA
AGATGAGCGACGGGTTCTTCATCG---------AGGAGGAGGAGGAAGAGGAGGCGGAGGAGGTGCTGACGGAGAGCTCC
TCCATCGGGGCGCCGTCGCCGTCGAGCTCTTCCATCGGGGAGGACTCCTCGTCGGAGGTTGGTGGCGAAGGGGAAGACGA
GGAGGTGGAGAGCAAGCTCAAGGAGGAGCCCGGGCTCGGGTGCCTGGACGCCCTGGAGGACTCCTTGCCCATCAAGTGAG
TCAAATGCTTCTCTGAATATGCTTCC-TTTTGCTTGCCCAAAATGAGGAAAAAAAGAAGATCTTTTTTGGGGATTCTTTG
ATCCATTTGCAAAAGCGCGAGTAG---GAAATTAGTATGATGTTTCATCGTATTTAGAGATCACAAGTTATCATCGGTTC
CTCAATTGCAATTGA-TTTGATCGAGCGAGGAAGAGAGGGGTATGGAAAATTGATCCTTCGTTTTCTTGGCGATTTTTCA
GGAACGGGCTGTCAAGCTTCTACGCCGGCAAGTCCAAGTCCTTCACCAGCCTCGCGGAGGCGGCGGCGCGGGACGCCGTG
AAGGAGCTCGCCAAGCCGGAGAACCCCTTCAACAAGCGCCGCCGCATTCTGGCCACCTGGTCGCGCCGCGCCTCCTGCAG
CTCGCTGGCCACGGCCACCTACCTGCCCCCGCTCCTCGCCCCCGACCACGCCCTCCCCGAGGGCGACGAAGGCGAGGAAG
ACGACGACTCCGACTCCGGCTCCGACGAGCAGCACCGCGGCAAGAACGGGTGGGAGGCGCCGGCATTGCCGCCCCCTCGG
CTCAGCGTGAACACCCAGACCGGCGCATCGGCGGCGAGGAGGGGCGGCAGCTTCAGGTCGCCGAGATCGTATTCACTGTC
AGATCTTCGAAACGGCGGTGATGCTAGTTATAATCAGTAGCTGCGAATTCGCAGCCATTGATCTCTCTTGTGTCCCATAG
ATCTGTCACTACTACTTACTCCTTAATTATATATAAGTAAGCAATCGCAAGAGCATGTGTAAGTGTCTA-AGCTAAATTC
GTTGTGTTCTTGTATCCATGTCCTGGATCCCGTTGACCTCGCTCACCTC-----ATGTACGCAGACATGTATGAACTGCT
CCGGTGAACTGAGTTCACCGAACTGATCCAACACCCCGGCCATCATTAACTAATGATGAACGATCCTCGAGATAAGATTA
GTTAGTTAATTAATGGCATCGCTCCTGATCCTTTCGTCCTGTACAAACATATATATACAATTTGTTGATGCAA-TTTGAT
TTGCTGGATAGGGGATCCCC----GCCATGATTGTGCTCTACCAC--CAAGTGGGTAGGTCGCCCTTAAGCCATGCTTTT
GCCTTGTGGTGGGAAGGGAC-----------GAAATGTGCCTTGAAATGGCCACCAACGAGGAAGAATCAGACAGCCTAA
ATCAATCCCAAGAAGAAAGAA-AGAAAGATGGCGCTTTTGCAGGT------ACCGGTAGTAAACTTTGTGCCTAGAAAGG
CAGATCCATGGGT--------ACGCTTCTTTCCCCAGCAATCTGCGTGGTGCGTAGATCTGTCACCACGGCGGCAGTTTC
TGTTCCGTTTTTTCTAAGGAAAGTTACGCCCCATGTTTGCGCCGAACGGGCGGCAAGAACAGAAACGGGTCGCCGCGT--
-------------AAATAAACAAGCCGCTTGCTTTACCCCCAACACGACGTGGATCCATTCATTATTCCGGGGCTTGTTC
CGCTTG-----TCTCTCTTGGCCTGGGAGAAGAGAAGTGGGTGAAACGTAGC------AGTAGTAATAAATCAAGTAAAT
CACGGATCACAATCACGGCGACAAGGTCCCATTTGGCATCTGAAGTTTTTAACCTTGCTCTCGTATTGTTTTCATACAGC
ACCGTCGGTGCGTCGCACGAGCTGGGCTTGTCTTGTGATGGCTCACCTC----AACCATTCTTTTCTCCGGGATTTTGGT
TTCTCTCGGCGACAAGTCT-----------------------------------------------
>SNPs
-SSSSS------------SS---------------------------S------S------------------------S
--S----------SSSSSS----------S----S----S-------------S-----S-------S-----S------
----------S-S-S-S--------S----------------------------------------------------S-
--SSS---------------------------------------------------------------------------
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-----------------------------------------------------------------S-SS-----------
--S-S------SSS-----------------S--------------SSSSS---------S------S-----S------
-----S--------------------------------------------------------------------------
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-----------------S---------------S--SS-SS-SS--S---------S---S-----S--S----------
--S-------------S---S-S-S-----SSSSS-----------SS-----------S--------S---S-------
---S-------S--S--------------S-S---S--S---S-----S------------------SSS---S-S---S
-S----------SS--S-S---SS--S------S----------------------S------SS--------S------
-------SS---S---S--------------------S-----------S-S--S--S--------S------SSSSSSS
SSSSSSSSSS--S------------S------------------------------------------------------
-----------------------------------------------------------------------S--------
-------------------------S-----S------------------------------------------------
-------------------------S-S----------------------------------------------------
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---------S-------------------------------------S--------------------------------
-----------------------SSSS------S-----------------------------S----------------
------------------------SSSSSSSSS-------------S--------------------S------------
--------------------------------------S-----------------------------S-----------
--------------------------------------------------------------------------------
---S-S------------------------------------------------------------------------S-
------------------------SSS-------------------------------------S----S----------
----S----------S-------S-----------------S------------------------S--S----------
----------------------------------S-----S---------------------------------------
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------------S--------------------------------------------------S--S-------------
----------------------------------------------------------S---------------------
--S-----------------------SS------------S---------------S--------S--S--S--S--S--
------------S-----S-----S--S--S--S----------------------------------------------
-------------------------------------S------------------------------------------
--S--------------S-----------------------------SSSSSS---------------------------
----S--------------------------------------------------------SS-----S-----------
-------------------S-----S-----S--S--SSSSS-SS------------------------S----------
-----------------S-S--------------S---SSSS-SSSS--S--S------------S-S-S-SS--S--SS
--SS--SSSS-SSSS----------S-------------S----------S----------------------SS-S---
----------------S----------------------------SSSSSS--S-------------------S------
-------SS-SS-SSSSSSSS-------------------------S---------------------------------
-S-----------------------S-----------S------------------------S--------S------SS
SSSSSSSSSSSSS---------------------------S-------------------S----S--S--------S--
------SSSSS---------------------------S------------S--SSSS--------------S-------
------------------------S-----S---------S----S----------------------------------
--------------------------------------------S-----------------------------------
S----S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_171
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-----------------------------------------------------------------------CCAGCGAAT
GTTTGTTGGCA---------------------------------------------------------------------
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>reverse_2150
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---------------------------------------------------------------------TGATTTTGCAG
GAACGGGCT-----------------------------------------------------------------------
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>forward_1710
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----------CGGGTTCTTCATCGAGGAGG--------------------------------------------------
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>reverse_3371
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----------CAAACCGCTTGCTTTACCCC--------------------------------------------------
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