>input_sequence_58188
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--------------------------------------------ATGGGGGGAGAGACCAAGGTGGTCGAGGAGACCAAG
GTC---GAGCTGAAGACGGCCGTGTACAAGGTGCACGTCCACTGCGGGCAATGCGCGCGCGACATAGAGACGCAGTTCAC
CGAGTTCCACGGTACGTACTCCTCAGTTTCTGTCTCTGTGATC----ATAACATAGCACACTGACTGACACCGGCGGGCT
GGGGGTGCGCGT-GTGTGCTGCAGGGGTTCAGGAGGTGAAACTGGACGCCGGGTCAGGGAAGGTGACGGTGAGGGGCGTC
GGGTTCGACGAGGAGAAGCTCAGGGTGAAGGTATCCAGGGGATGCAGGAGGCACGTTGAGTACATACCTCCCCCACCTCC
CCCCAAGGAGATAATCACCGAGGTCAAGAGCACGAAAGAGGTAA----ACAGACAATCTCGATCTCTATCTGAAAAGTGA
AAACCACCTTGTAAAGGCGTTTCGTTTCGGTGCATCATTCATCCCTTTTCCCGTTACATAATGCAGGAGATCAAGATCAT
AACGGTGAAGGTTCCCTTGCACTGTCCGGACTGCGCAGTCATGGTCAGAGAGATCCTGCTTGAGCACAAGCGTAATT---
--TCCTCTCTCACAAATTCGTCCTGT----------------------------ATCTATGTTGATACGTGCACATGCTA
ATTAATTTGCGACTAATGCAGATATTTACGCTGCCAAGGCGGACTTGGGCAAGAACACTTGTGTCATCGAAGGCGTCATC
GAGGAGAAGAAGCTGACCGAGTACATCTACCAGAGAACGCGCAAGCACTGCGTCATCGACAAGGTAGAGACGACGGTGCG
CATCGTGGAGGAGACGGTCGTGGTGAAGAAGAAGAAAGAGGAGGTGGTCGAGAAGGTGGTCGAAGAGGTTGCAGAGGTTG
TAGAG---------GAGAAGATCAAGGAGGTGGTGGCCCCCTACTTCCTCCCCTGCACGCACCCGCACTTCGCCGACTAC
TCGCACCCGTCGCACCGCTGCGGCGGCGACAGCTGCTCGCCGTACGGTGGCGGTGGTGGTTACGGTTATGGCCACGGGCA
CGGCTACGGTGGTGG---TGG---TTACGGTCATGGCTACGGTGGTGGCTGCGGGTCATACAGTATGCACTCTGAGCTCA
GAGGGTACCAGGACACGTCATTCTTGCATTGCTCGCACCCTGTTGACTTCCTCAGTCACGACAACCCCAATGGATGCTCC
GTGATGTAG-----------------------------------------------------------------------
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-
>chr2D_1_TraesCS2D01G448800
TATGTTCATATTGCTATGCATTTGAAATGAACGAGGCCAGACCTGGATGGACATTTAGGAATACGGTTGGATGGCCCGCT
CCTGTATTCATATCCACGGACAAGTCCAGACCACGGGACCAGTCTGCAATGGATACTGTGTTTGTCTTAGGGGACGACAT
TGGAGATGCCCTTAGTGGGCATGTTCTTCCTTGCCTATTTTTGTTTCTTGTTTCCTTGGGCCGGCTCTTAGGTCGCATAG
TCGTTTTTGTTTCCGGTCGTCAGCTTGTGTCCTCGT--------------------------------------------
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-------------------------------------TGTTGACTTGGATTCCGACCCTTTCTGTCTTTCTTCTTTTCCT
TCTTCTTCTTTACAATGTTCACATGCATGGTTTGAAAAAAGAACATTGTGATAATCTACATTTTGAGCTTTCTCTCTTTT
TATTCGGCTCGACTTCTATTTTCGCCGTTGGATGCGGTCAGCATAGAACTTTGCCGTCCGCTGTTAA---AAAAAAGCAC
TTTGCTTATCGCAGCGTCGACTTGGAACCGTCAACGTTTTCGCCATGGTAGGTCAATCATGGATACTTTAATCAGCAGAC
GATGGCACGTCGACGTATAGGCGAAGTGTGCACTAATCAATTTGCTTGTGCTAAAAGTTGACCCGTCGTGAAGCGCGCGC
G----GTCAACCACACGACAGCCCAACCACTTGGGGGAAACATTCTTGGCGAACCGC-GAGTTTGGATTGACAAAACCCA
CGGCACGTCGTCACTCACGTCCCGGACGAGCACATACCTCCACGCTCGAAGTACATGCGAAGTGGATCGGTCCCGAACCT
CCGAGCCGTTTTTTTCCCAACCATCG-----------------------------------------ACAAGTGCTGTGA
ACCACCTCCAACAATTCTCCAACAAACAA------------------------------ACCTGAAGCTTACTCCTCGAG
CCGCGCACATTAA--CCCCCTCGATGCACTGGACACTGCAGCACCCACTCCCCAA--TGCAATGCCTAGCTAGCACTTCG
TAGTAGATCAAGGCGTGTAGTAGCACCAGCGTGGGAGAGTCGCCATGGGGGGAGAGACCAAGGTGGTCGAGGAGACCAAG
GTC---GAGCTGAAGACGGCCGTGTACAAGGTGCACGTCCACTGCGGGCAATGCGCGCGCGACATAGAGACGCAGTTCAC
CGAGTTCCACGGTACGTACTCCTCAGTTTCTGTCTCTGTGATC----ATAACATAGCACACTGACTGACACCGGCGGGCT
GGGGGTGCGCGT-GTGTGCTGCAGGGGTTCAGGAGGTGAAACTGGACGCCGGGTCAGGGAAGGTGACGGTGAGGGGCGTC
GGGTTCGACGAGGAGAAGCTCAGGGTGAAGGTATCCAGGGGATGCAGGAGGCACGTTGAGTACATACCTCCCCCACCTCC
CCCCAAGGAGATAATCACCGAGGTCAAGAGCACGAAAGAGGTAA----ACAGACAATCTCGATCTCTATCTGAAAAGTGA
AAACCACCTTGTAAAGGCGTTTCGTTTCGGTGCATCATTCATCCCTTTTCCCGTTACATAATGCAGGAGATCAAGATCAT
AACGGTGAAGGTTCCCTTGCACTGTCCGGACTGCGCAGTCATGGTCAGAGAGATCCTGCTTGAGCACAAGCGTAATT---
--TCCTCTCTCACAAATTCGTCCTGT----------------------------ATCTATGTTGATACGTGCACATGCTA
ATTAATTTGCGACTAATGCAGATATTTACGCTGCCAAGGCGGACTTGGGCAAGAACACTTGTGTCATCGAAGGCGTCATC
GAGGAGAAGAAGCTGACCGAGTACATCTACCAGAGAACGCGCAAGCACTGCGTCATCGACAAGGTAGAGACGACGGTGCG
CATCGTGGAGGAGACGGTCGTGGTGAAGAAGAAGAAAGAGGAGGTGGTCGAGAAGGTGGTCGAAGAGGTTGCAGAGGTTG
TAGAG---------GAGAAGATCAAGGAGGTGGTGGCCCCCTACTTCCTCCCCTGCACGCACCCGCACTTCGCCGACTAC
TCGCACCCGTCGCACCGCTGCGGCGGCGACAGCTGCTCGCCGTACGGTGGCGGTGGTGGTTACGGTTATGGCCACGGGCA
CGGCTACGGTGGTGG---TGG---TTACGGTCATGGCTACGGTGGTGGCTGCGGGTCATACAGTATGCACTCTGAGCTCA
GAGGGTACCAGGACACGTCATTCTTGCATTGCTCGCACCCTGTTGACTTCCTCAGTCACGACAACCCCAATGGATGCTCC
GTGATGTAGAGTGTTTGTATTTTGTAGGCTGATTTATGGCGAATGTGTTGAAATTCTAAATAAGAACACCACTGAACTAC
TCTCTCCATTTTTATTTATTTTCGCAAACACGCAAAAGCCGATATATTAAAAGGGGGAAAACGGAACAAAAATGCTAGAC
GCACGGATTACTACGGGCATTCAACCGACCCTTCCAACTAAACAAACTTGCCCCCTCCCTATTTGCCACTTCAAATCTAC
CCTGTAATAAGCTCGTGAAGGTCCGTTGATGTAATGCTCTATCGCACCCAAGCCTCTTTATATCTTCTTCAAGACAGTCA
CCATACCTATCTATTATGGCATTTACATAACAATTCCGAGATATATTGCCATGCAACTAACGTCATCATCATATACATGA
CTTGAGCATTCATTGTCATATTATTTTGCATGATTGTAAGATAGCTAGCATGATATTTTCATGGTTTGTCCGTTTTTTGA
TATCTTTGCTATGCTAGATCATTGCACATTCTGGTACACTACCAGAGGCATTCATATAGAGTCATA--TT--CTTCTAGA
TATCGAGTTGTAATATTGAGTTGTAAGTAAATAAAAGTGTGATGATCATCATTATTAGAGCATTGTCCCAGTGAGGAAAG
GATGATGGAGACTCTTA-TCCTCCACAAGTCAGGATGAGACTCCGGACGAAAAAAAGG----------AAAAAAAAAAG-
-GCAAAAAA--GAGCT-----------CAACAAAAAAAAGAAA-AAAAATGAGAAGGGGCAATGCTACTATCCTTT-ACC
ACACTTGTGCTTCAGAGTAGCACCATATTTTTCATATAAGGAGTCTCATATGTTGTCACTTTCATATACTAGTGGGAATT
TCCATATGCTAGCAGTGACCTCTCCCACATAAAAACTTGCTATCGGTCTAGTAACTTAGCCAATTGCTTACGGACAATAC
CACAAATCTTACCACCACTTTTCCACACTCGTACTAATTTAATTGTACTTTAACTAGAACAACACTTAACTTTTATTTTC
A
>chr2A_164
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---AGATGCTCTTAGTGGGCATGTTCTTTCTTGCCTATTTTTGTTTCTTGTTTCCTTGGGCTGGCTCTTAGATTGCATAG
TCGTTTTTGTTTCCGGTCGTCAGCGCTTGTGTACTCATTGTTGACTTGAATTTTTTACTAGAGAATTTGCCGATCTATTC
ATAATTAATCATGGCAGTCCAAAGAAAACTAAATGTAATAAAAAATATGATTAGGTTCATGGCCATCTAGCGATGACTAC
AAACATTGAAGCGAGTCAAAGGCGCGCCGCCATCATCGCCCTTCCCTTACCTGAGCCGGACAAACATTGTTATAGTAGAC
GGTTGGGAAGTCGTTGTATTAAGGCCCCAAAAGAACAGAGCACCAGAACAACAACCATTGCCGATGAATTGAGTCGTAGA
TCAAAAAGATCAAACCTGTAATCACACGAACAAAGATGAACGAAAACTAGATCCAAATAGGTACCGTGTGATCCGACGGT
GACACATCTTTACATGTCCTCCGACGATGCCGAACGCACCATCGGGACGGAGATCAGACGTGGAAGATATTATTTGAATT
CAGTGGGGGACGGAGATCAGACGTGGGAAACATTATTCTTACCGAGGGACATCACTACCAGTACACAACTCCAACCAAGA
CGCCGAACCTAACAAAAATGACATCGGAGTCCCTCCTGCCGGTGAGGGGCTGAGATCCTCCGCACCTCCATGGCCCAAAG
GCCATCTGATGCGAGGTAGACCGACGCCGGCGGGAGGAGAAAGAAGGTTTTTCCTGAGGAGGAGGAGGAGAGCCCGTGCT
AGCATGGACGTTATCGTGCGTCCATGCTTAGTACTGATGTTGACTTGGATTTCGACCCTTTCGCTT--------------
TCTTCTTCTTTACAATGTTCACATGCATGGTCTGAAAAAAGAACATTTTGATAATCTACATTTTGAGTTTTCTCTGTTTT
TATCCGGCCCGACTTCTACTTTCGCCGATGGTTGCCGTCAGCATAGAACTTTGCCGTCCGCTGTTATAACAAAAACACC-
---GCTGATCGCAGCGTCGACTTGGAGCCGTCAACGTTTTCGCCTTGGTAGGCCAATCATGAATACTTTAACCAGCAGAC
GATGGCACGTCGACG--TAGGCGAAGTGTACACTAATCAATTAGCTTGTGCTAAAAGTTGACCCGCCGTGAAGCGCGCGC
GCGCGGTCGATCACACGACAGCCCAACCACTTGGGGGAAACATTCTTGGCGAACCAC-GAGTTTGGATTGACAAAACCCA
CGGCACGTCGTCACTCACGTCCCGGACGAACACATACCTCCACGCTCGAAGTGCATGCGAAGTGGATCGATCCCGATCCT
CCGAGCCGTTTTTTCTCAACCATCGACAAGGGATGTGAACCCCGACTCAAAAAAGCAAAACAAGAAAACAAGTGACGCGA
ACCACCTCCAACAACTCTCCAACAAACACACACCCTGCGTGCACACACACCCACCTCACACCTGAAGCCTACTCCTGGAG
CCGCGCACATTAA--CCCCTTGAATGCGTTATGCATCGCAGCATCCACTCTTTTTAGTGCATTGCCTAGCTAGCACTCCG
TAGTAGCACCAGCTGAGGGAT--------------AGAGTCGCCATGGGGGGAGAGACCAAGGT---CGAGGAGACCAAG
GTGGTGGAGCTGAAGACGGCCGTGTACAAGGTGCACGTCCACTGCGGGCAATGCGCTCGCGACATCGAGACGCAGTTCAC
CGAGTTCCACGGCACGTGCTTCTCAGTTTCTGTTTTGCTTTGTTTTTATAGCATAGCATACTGACTGACACCGGCGGGCT
GGGGGCGTGCGTGGTGTGCTGCAGGGGTTCAGGAGGTGAAACTGGACGCGGGGTCAGGGAAGGTGACGGTGAGGGGCGTC
GGGTTCGACGAGGAGAAGCTCAGGGTGAAGGTGTCCAAGGGATGCAGGAGGAACGTCGAGTACATACCTCCCCCACCTCC
CCCTAAGGAGATAATCACCGAGGTCAAGAGCACGAAAGAGGTAATTAAACAGACAATC----TCTCTATCTGAAAAGTGA
AAACCACCTTGTAAATGCGTTCCGTTTATGTGCACCATTCATCCCTTTTCCCGTTTCATAATGCAGGAGATCAAGATCAT
AACCGTGAAGGTTCCCTTGCACTGTCCGGACTGCGCAGTCATGGTCAGAGAGATCCTACTTGAGCACAAGCGTAATT---
--TCCCCTCTCACAAATTCGTCCTGTATCTATGTTTTTTTGTGGGTGATCCTGCATCTATGTTGATACGTGCACATGCTA
ATTAATTATCGACTAATGCAGATATTTACGCTGCCAAGGCGGACTTGGGCAAGAACACTTGTGTCATCGAAGGCGTCATC
GAGGAGAAGAAGCTGACCGAGTACATCTACCAGAGGACGCGCAAGCACTGCATCATCGACAAGGTGGAGACGACGGTGCG
CATCGTGGAGGAGACGGTGGTGGTGAAGAAGAAGAAAGAGGAGGTGGTCGAGAAGGTGGTCGAAGAGGTTGCAGAGGTTG
CAGAGGTTATAGAGGAGAAGATCAAGGAGGTGGTGGCCCCCTACTTCCTCCCCTGCACGCACCCGCACTTCGCCGACTAC
TCGCACCCGTCGCATCGCTGCGGCGGCGACAGCTTCTCGCCGTGCGGTGGTGGTGGTGGTTACGGTTATGGCCACGGGCA
CGGCTACGGTGGTGGTGGTGGTTATTACGGTCATGGCTACGGTGGTGGCTGTGGGTCATACAGTACGTACTCTGAGCTCA
GAGGGTACCAGGACACGTCCTTCTTGCATTGCTCGCACCCTGTTGACTTCCTCAGTCACGACAACCCCAATGGATGCTCC
GTCATGTAGAGTGTTTGTATTTTGTAGGCTG-TTTATGGCGAATGTGTTGAAATTCTAAATAAGAACACCACTGAACTAC
ACTCTCCGGTTTTATTTATTTTTGCAAACACGAAAAAACC----------------------------------------
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>chr2B_314
TTTC----------------------------------------------------------------------------
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-----------------------------------------------------------------T--------------
TCTTCTTCTTTACAATGTTCACATGCATGGTTTGAAAAAAGA---------------ACATTTTGAGCTTTCTCTGTTTT
TATTCGGCCCGACTTCTATTTTTGCCGTTGGACGCCGTCACCATAGAACTTTGCCGTCCGCTGTTAA---AAAAACACC-
---GCTGATCGCAGCGTCGACTTGGCGCCGTCAACGTTTTCGCCTTGGTAGGTCAATCATGAGTACTTTAATTCGCAGAC
GATCGCACGTCGACG--TAGGCGAAGTGTACACTAATCAATTAGCTTGTGCTAAAAGTTGACCCGTCGTGAAGCGCGCGC
G----GTCAATCACACGACAGCCCAACCACTTGGGGGAAACATTCTTGACGAACCACAGAGTTTGGATTGACAAAACCCA
CGGCACGTCGTCACTCACGTCCCCGACGAACACATACCTCCGCGCTCGAAGTACATGCGAAGTGGATTGAT-CCGACCCT
CCGAGCCGTTTTTTCTCAACCGTCAACAAGTGATGTGAACCCCGACTCAAAAAAACAAAACAAAGAAACAAGTGATGCGA
ACCACCTCCAACAATTCTCCAACAAACGAACACCCTGCGTGCACACACT--CACCTCACACCTGAAGCCTACTCCTGGAG
CCGCGCACATTAACCCCCCTTGAATGCGTTATGCATCGCAGCATCCACTCTTTTTAGTGCATTGCCTAGCTAGCACTCCG
TAGTAGCACCAGCTGAGGGAT--------------AGAGTCGCCATGGGGGGAGAGACCAAGGTGGTCGAGGAGACCAAG
GTG---GAGCTGAAGACGGCCGTGTACAAGGTGCACGTCCACTGCGGGCAATGCGCGCGCGACATCGAGACGCAGTTCAC
CGAGTTCCACGGTACGTGCTCCTCAGTCTCTGTTTTGCTTTGTTTTTATAGCATAGCATACTGACTGACACCGGCGGGCG
G-------GCGT-GTGTCCTGCAGGGGTTCAGGAGGTGAAACTGGACGCCGGGTCAGGGAAGGTGACGGTGAGGGGCGTC
GGGTTCGACGAGGAGAAGCTCAGGGTGAAGGTGTCCAAGGGATGCAGGAAGCACGTTGAGTACATACCTCCCCCACCTCC
CCCCAAGGAGATAATCACCGAGGTCAAGAGCACGAAAGAGGTAA----ACAGACGATC----TCTCTATCTGAAAAGTGA
AAATCACCTTGTAAAGGCGTTTCGTTTCGGTGCATCATCCACCCCGTTTCCCGTTTCATAATGCAGGAGATCAAGATCAT
AACCGTGAAGGTTCCCTTGCACTGTCCGGACTGCGCCGTCATGGTCAGAGAGATCCTACTTGAGCACAAGCGTAATTTCA
TTTCCTCTCTCACAAATTCGTCCTGT----------------------------ATCTATGTTGATACGTGCACATGCTA
ATTAATTGTCGAGTAATGCAGATATTTACGCTGCCAAGACGGACTTCGGCAAGAACACTTGTGTCATCGAGGGCGTCATC
GAGGAGAAGAAGCTGACCGAGTACATCTACCAGAGGACGCGCAAGCACTGCGTCATCGACAAGGTAGAGACGATGGTGCG
CATCGTGGAGGAGACGGTCGTGGTGAAGAAGAAGAAAGAGGAGGAGGTCGTGAAGGTGGTTGAAGAGGTTGCAGAGGTTG
TAGAG---------GAGAAGATCAAGGAGGTGGTGGCCCCCTACTTCCTCCCCTGCACGCACCCGCACTTCGCCGACTAC
TCGCACCCGTCGCACCGCTGCGGCGGCGACAGCTGCTCGCCGTACGGTGGCGGTGGTGGTTACGGTTATGGCCACGGGCA
CGGCTACGGTGGTGGTGGTGG---TTACGGTCATGGCTATGGTGGCGGCTGTGGGTCATACAGTATGCACTCGGAGCTCA
GAGGGTACCAGGACACGTCGTTCTTGCATTGTTCGCACCCTGTTGACTTCCTCAGTCACGACAACCCCAATGGATGCTCC
GTCATGTAGAGTGTTTGTATTTTGTAGGCTGATTTATGGCGAATGTGTTGAAATTCTAAATAAGAACACCACTGAACTAC
TCTCTCCGTTTTTATTTATTTTTGCAAACATGCAAAAACC----------------------------------------
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>chr7A_2450
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---------------------------------ATGCTCTATCACACATAAGCCTCCTTATATCTTCCTCAAAACAGCCA
CCATACCTACCTATCATGGCATTTCCATAGCCATTCCGAGATATATTGCCATGCAACTTCCTTCATCATCATATACATGA
CTTGAGCATTCATTGTCATATTGCTTTGCATGATCGTAAGATAGCTAGCATGATATTTTCATGGCTTGTCCGTTTTTTGA
TATCGTTGCTACGCTAGATCATTGCACATCCTGGTACACTGCCAGAGGCATTCATATAGAGTCATACTTT--GTTCTAGA
TATCGAGTTGTAATATTGAGTT-TAAGTAAATAGAAGTGTGATGATCATCATTATTAGAGCATTGCCCCAGTGAGGAAAG
GATGATGAAGACTATTATTCCCCCACAAGTCGGGATGAGACTCCGGACAAAAAATA-----AAA--ATAATAAAAAAAG-
-GCCAAAAAA--G--AGGGCTAAAAAACAAAAAAAATGAGAGA-AAAAGAGAGAAGGGGCAATGCTCCTATCCTTTTACC
ACACTTGTGCTTCAAAGTAGCACCATGTTCTTCATAGTGTGAGTCTCCTATGTTGTCACTTTCATATACTTGTGGGAATT
T-------------------------------------------------------------------------------
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>chr5A_2450
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---------------------------------ATGCTCTATCACACATAAGCCTCCATATATCTTCCTCAAAACAACCA
CCATACCTACCTATCATGGCATTTCCATAGCCATTCCGAGATATATTGCCATGCAACTTCCATCATCATCATATACATGA
CTTGAGCATTCATTGTCATATTGCTTTGCGTGATCGTAAGATAGCTAGCATGATGTTTTCATGGCTTGTCCGTTTTTTGA
TGTCATTGCTATGCTAGATCATTGAACATCCTGGTACACTGCCAGAGGCATTCATATAGAGTCATACTTT--GTTCTCGA
TATCGAGTTGTAATATTGAGTTGTAAGTAAATAAAAGTGTGATGATCATCATTATTAGAGCATTGCCCCAGTGAGGAAAG
GATGATGGAGACTATGATTCCCCCACAAGTCGGGATGAGACTCTGGACGAAAAAAAGAGGCCAA--AAA-----AAGAG-
-GGCCCAAAA-----------AAACAAC--AAAAAATGAGAGA-AAAAGAGAGAAGGGGCAATGCTACTATCCTTTTACC
ACACTTGTGCTTCAAAGTAGCACCATGTTCTTCATATAGAGAGTCTCTTGAGTTATCACTGTCATATACTAGTGGGAATT
TTCAT---------------------------------------------------------------------------
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>chr2D_2452
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-----------------------------------GCTCTATCACACATAAGCCTCCTTATATCTTCCTCAAAAAAGCCA
CCATACCTACCTATCATGGCATTTCCATAGCCATCCCGAGATATATTGCCATGCAGCTTCCATCATCATCATATACATTA
CTTGAGCATTAATTGTCATATTGCTTTGCATGATCGTAAGATAGCTAGCATGATATTTTCATGGCTTGTACGTTTTCTGA
TATCTTTGCTATGCTAGATCATTGCACATCTGGGTACACTGCCAGAGGCATTCATATAGAGTCATA--TT--GTTCTAGA
TATCGAGTTGTAATATTGAGTTGTAAGTAAATAAAAGTGTGATGATCATCATTATTAAAGCATTGTCCCAGTGAGGAAAG
GATTATGGAGACTATGATTCCCGCACAAGTCGGGATGAGACTCCGGACGAAAAATA-----AAA--AAATAAAAAAGAG-
-GAAAAAAA--CAGAA-----------GGCCCAAAAAAAGAGAGAAAAGAGAGAACGGGCAATGCTACTATCCTTTTACC
ACACTTGTGCTTCAGAGTAGCACCATGTTTTTTATATAGAGAGTCTCTTGAGTTATCACTTTCATATACTAGTGGGAATT
TTCAT---------------------------------------------------------------------------
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>chr2D_2452
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-----------------------------------GCTCTATCACACATAAGCCTCCTTCTATCTTCCTCAAAACAGCCA
CCATACCTACCTATCATGGCATTTCCATAGCCATTCCGAGATATATTGCAATGCAACTTCCATCATCATCATATACATGA
CTTGAGCGTTCACTGTCATATTTCTTTGCATGATCGTAAGATAGCTAGCATGATATTTCCATGGCTTGTCC-TTTTTTGA
TATCTTTGCTATGCTAGATCATTGCACATCCTGGTACACTGCCAGAGGCATTCATATAGAGTCATACTTT--ATTCTAGA
TATCGAATTGTAATATTGAGTTGTAAGTAAATAAAAGTGTGATGATCATCATTATTAGAGCATTGCCCTAGTGAGGAAAG
GATGATGGAGATTATGATTCCCCCACAAGTCGGGATGAGACTCCGGACGAAAAATA-----AAATAAAAATAAAAGGAG-
-GCAAAAAA--GAGAG-----------AGGACCAAAAAACAAA-AAAAGAGAGAAGGGGCAATGCTACTATCCTTTTACC
ACACTTGTGCTTCAAAGTAGCACCATGTTCTTCATAGGGAGAGACTCCTATGTTGTCACTTTCATATACTAGTGGGAATT
T-------------------------------------------------------------------------------
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>chr1A_2452
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-----------------------------------GCTCTATCGCACATAAGCCTCCTTATATCTTCCTCAAAACAGCCA
CCATACCTACCTATCATGGCATTTCCATAGCCATTCCGAGATATATTGCCATGCAACTTCCATCATCATCATATACATGA
CTTGAGCGTTCATTGTCATATTGCTTTGCATGATCGTAAGATAGCTAGCATGATATTTCCATGGCTTGTCTGTTTTTTGA
TATCTTTGCTATGGTAGATCATTGCACATCCTGGTACACTGCCAGAGGCATTCATATAGAGCCATACTTT--GTTCTAGA
TATCGATTTGTAGTATTGAGTTGTAAGTAAATAAAAGTGTGATGATCATCATTATTAGAGCATTGTCCCAGAGAGGAATG
GATGATGGAGACTATGATTCCACCACAAGTCGGAATGAGACTCCGGACAAAAAATA-----TAA--AAATATAAAAAAGA
GGCCAAAAAA--G--AGGGCC------C--AAAAAATGAGAGA-AAAAGAGAGAAGGGGCAATGCTACTATCCTTTTACC
ACACTTGTGCTTCAGAGTAGCACCATGTTATTCATATAGAGAGTCTCTTGAGTTATCACTTTCATATACTAGTGGGAATT
TTCAT---------------------------------------------------------------------------
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>chr4D_2452
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-----------------------------------GCTCTATCACACATAAGCCTCCTTATATCTTCCTCAAAACAGCCA
CCATACCTACCTATTATGGCATTTCCATAGCCATTCCGAGATATATTGCCATGGAACCTCCATCATATTCATATACATGA
CTTGAGCATTCATTGTCATATTGCTTTGCATGATCGTAAGATAGCTAGCATGATATTTTCATGGCTTCTCCTTTTTTTGA
TATCTTTGCTATGCTAGATCATTGCACATCCTGGTACACTGCCAGAGGCATTCATATAGAGTCATA--TT--GTTCTAGA
TATCGAGTTGTAATATTGAGTTGTAAGTAAATAAAAGTGTGATGATCATCATTATTAGAGCATTGTCCCTATGAGGAAAG
GATGATGGAGACTATGATTCCCCCACAAGTCGGGATGAGACTCCAGACAAAAAAA---------------------GAG-
-GCCAAAAAAAGAGAAGGCCCAAAAAACAAAAAGAAAGAGAGA-AAACGAGAGAAGGGTCAATGCTACTATCCTTTTACC
ACACTTGTGCTTCAAAGTAGCACCATGTTCTTCATAGAGAGAGTCTCCTACGTTGTCACTTTCATATACTAGTGGGAATT
T-------------------------------------------------------------------------------
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>chr7D_2452
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-----------------------------------GCTCTATCACACATAAGCCTCCTTATATCTTCCTCAAAACAGCCA
CTATACCTACCTATCATGGCATTTCCATAGCCATTTCGAGATATATTGCCATGCAACTTCCATCATCATCATATACATGA
CTTGAGCATTCATTGTCATATTGCTTTGCATGATCGTAAGATAGCTAGCATGATATTTTCATGGCTTGTCCGTTTTTTGA
TATCTTTGCTACGCTAGATCATTGCACATCCTAGTACACTGCCAAAGGCATTCATATAGAGTCATA--TTTTGTTCCAG-
TATCGAGTTGTAATATCGAGTTGTAAGTAAATAGAAGTGTGATGATCATCATTATTAGAGCATTGTCCCAGTGAGGAAAG
GATGATGGAGACTATGATTCCCCCACAACTCGGGATGAGACTCCGGACGAAAAAAA-----CAA--AAA-----AAGAG-
-GCCAAAAAATAG--AGAG-C------C-AAAAAAATGAGAGA-AAAAGAGAGAAGGGGCAATGCTACTATCCTTTTACC
ACACTTGTGCTTCAGAGTAGCACCATGTTCTTCATATAGAGAGTCTCTTGAGTTATAACTTTCATATACTAGTGGGAATT
TTCAT---------------------------------------------------------------------------
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>chr3D_2452
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-----------------------------------GCTCTGTCACACATAAGCCTCCTTATATCTTCCTCAAAACAGCCA
CCATACCTTCCTATCATGGCATTTCCATAGCCATTCCGAGATATATTGCCATGCAACTTCCATCATCATCATATACATGA
CTTGAACATTCATTGTCATATTTCTTTGCATGATCGTAAGATAGCTAGCATCATATTTTCAAGGCTTGTCCATTTTTTGA
TATCTTTGCTATGCTAGATCATTGCACATCCTGGTACACTGCCAGAGGCATTCATATAGAGTCATA----TTGTTCTAGA
TATCGAGTTGTAATATTGAGTTGTAAGTAAATAAAAGTGTGCTGATCATCATTATTAGAGCATTGTCTCAGTGAGGAAAG
GATGATGGAGACTATGATTCCCCCACAAGTCGGGATGATACTCCAGACAAAAAAGAGGCC--------------------
--AAAAAAA--GAGAGGGCCCAAAAAAC--AAAAAAAAAGAGA-AAAAGAGAGAAGGGGCAATGCTACTATCCTTTTACC
ACACTTGTGCTTCAGAGTATCACCATGTTCTTCATATAGAGAGTCTCTTGAGTTATCACTTTCATATACTAGTGGGAATT
TTCAT---------------------------------------------------------------------------
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>chr1D_2452
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-----------------------------------GCTCTATCACACATAAGCCTCCCTATATCTTCCTCAAAACAACCA
CCATACCTACCTATCATGGCATTTCCATAGCCATTCCGAGATATATTGCCATGCAACTTCCATCATCATCATATACACGA
CTTGAGCGTTCATTGTCATATTGCTTTGCATGATCGTAAGATAGCTAGCATGATATTTCCATGGCTTGTCCTTTTTTT-A
TATCATTGCTATGCTAGATCATTACACATCCTGGTACACTGCCAGAGGCATTCATATAGAGTCATA--CTTTGTTCTAGA
TATCGAGTTGTAATATTGAGTTGTAAGTAAATAAAAGTGTGATGATCATCATTATTAGAGCATTGCCCCAGTGAGGAAAG
GATGATGGAGACTATGATTCCCCCACAAGTCGGGATGAGACTTCAGACGAAAAATA-----AAA--AAATAAAAAAGAG-
-GCCAAAAAAAGG--AGGGCC------C-AAAAAAATGAGAGA-AAAAGAGAGAAGGGGCAATGCTACTATCCTTTTACC
ACACTTGTGCTTCAGAGTAGCACCATGTTCTTCATATAGAGAGTCTCTTGAGTTATCACTTTCATATACTAGTGGGAATT
TTCAT---------------------------------------------------------------------------
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>SNPs
-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS------S------------------S--------------------------------S---------S-S------
------------------------SSS---SSS-SS--------------------------------------------
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---------------------------------------------------S----------SS-SSSSSSSSSSSSSSS
-----------------------------------------------S---------------------------S----
--------S--------------------------S---------------------------------------SS-SS
SSS---S-------------------S-----------------S----------------S------------------
---------------SS------------S------------S-------------------------------------
----------S--------------------------------------------S------------------------
-----------------------------S---------------------------------------S------S---
--------------SS-S-S-SSSSS------------------------------------------------S--S--
--------------------------------------------------------------------S-------S---
-------------------S-SS----SS-SSS--SS------S------SSSSS------S---------------S--
------SS-S--SS-S-SSS-SSSSSSSSSSSSSS---------------------------------------------
--S--------------------------------------------------------------S--------------
-----------------S---------------S-SSS-SSSS-------S-------S---------------------
-----S-S------------------------------------------------------------------------
--------------------------------S----S------------------------------------------
----------------------------------------------------------SSSS------------------
-------------------------------------------------------S------------------------
---S-----------------------------------------------------S----------------------
--------------------------------------------------------------------------------
-------SS-----------------------------------------------------------------------
-----------------------------------S--------------------------------------------
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---------------------------------------------------S----------------------------
-------------------S------------------------------------------------------------
--S-----------------------------------------------------------------------------
-------S--------------S--------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------SS-------S----------S----S----S--
---------S--------------S----S-S--------------------------SS-S------------------
----------------------SS----------S-----------------------------S---------------
-----------------------------S----------S-------------------------------S-------
--------------------------------------------------------------------------------
-------------S-------S---------S------------------------------------------------
--------------SS--------------------------------SS------------------------------
--------------------------S-----------SS-------S--------------------------------
-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S
>forward_1788
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--------CAAGGCGTGTAGTAGCACCA----------------------------------------------------
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>reverse_3712
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-------------------------------AGGATGAGACTCCGGACGAA-----------------------------
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