>input_sequence_58174
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---------------------------------------------------------------------------ATGAT
AATGGGCGTGGGGCGTGCAACAAGAAGGATGCAAGGCAGGAGTTCCATGTCGGTCTTGCTGGTGTCGTTGCTGCTGCTGG
CGGCGGCGGCCGGTGTTTCCAGCCGAGCCACGTACACGGGCAGCAGCACCGCAGGTGCCGGTGCAAGTGTGACGACGACG
GCGCCGCCGAAGAAGCATGTTGATGGGAAGAAGCAGCAGGTGCCGGCGCTGGTGGTGTTCGGCGACTCGATCGTCGACCC
GGGCAACAACAACGCCATCAGCACCATCGTCAAGGCCAACTTCGCGCCCTACGGCCACGACTTCGGCGCCGACCACCGCC
CCACGGGCCGCTTCTGCAACGGCAGGATCCCCACCGACTTCATCGCCTCCAGGCTCGGCCTCAAGCAGCTCCTCCCGGCG
TACCTGG------CCCCGAACCTGACGACGCACGACCTGCTCACCGGCGTCAGCTTCGCGTCGGGCGGCACGGGGTACGA
CCCGCTCACG--GCGCAGCTCGCCTCCGTCATCTCCATGACGGACCAGCTCCGCATGTTCCACGAGTACAAGGCCAGGGT
CCGCGCCGCGGCCGGCGACGCCGCGCTCTCGG-------------------------AGATCCTCGCCAGGGGCGTGTTC
GCGGTGTGCGCCGGCAGCGACGACGTGGCCAACACCTACTTCACCATGCGCGCGCGGAGCTCCTACTCGCACGCCTCCT-
--------------------------------------------------------------------------------
-----------------------------ACGCGTCGCTCATGGTCGCCCACGCC-------------------------
-----------------ACCGCCTTCCTCGACGGCCT-------------------------------------------
-----------------------------GCTGGCCGCGG----------------------------------------
--GCGCCCGCCGCGTCGCCGTCATCTCCATGCCG----------------------------------------------
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-------------CCCATCGGGTGCGTGCCCTCCCAGCGCACGCTCTCGGGCGGCATGGGGCGCGAGTGC----------
---------------TCCCCGGACCACAACGAGATCGCGGAG-----------CTGGTGAACTCGGGAATGGGCACCGCC
GTCG----------------------------------------------------------------------------
-------ACACCCTCAAGGCGAAGTACCCGGGGGCGAGGGTGATGCTGGTGGACATCTACGGGTACCTGCTGGACATGAT
GGTGCGGCCGGACGGGTACGGGTTCAGGGAGTCCACGCTGGGCTGCTGCGGCACGGGCATGATGGAGGTCGCCGTGCTGT
GCAACGGCGTCACGTCGGCGGTGTGCGGGGACGTGGAGGAGTACTTGTTCTGGGACAGCTACCACCCCACCGAGAAGGCC
TACAGGATCCTCGTCGACTACGTCTACGACAACTACCTCAAGGAGCTCATCGCCTAG-----------------------
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-------------------
>chr1A_1_TraesCS1A01G322600
GAGGAAGGATGCATTGGACACGGCAAGGGTTTCCGGCGCACTAACACCACTGCATGGACGGTCTTTTTTCCTTGAGCACA
AACTCAACACCCTGCCGTTACAACGATCGCCGCAGTGTTTTTTATACCCGGGCCAGCGCTGGGCCGGGACCTGGATGCTC
CTACCCACTACACCGCCTGGTCCGGCTCGTTCCGTGCGCGCCCACGACGCTCCCCGCGCCGAGCCCGCAACAGACCAGCG
TGATCACCGCGTCCCCGATCGCCAACGGCCTCGCCCTACACGCACGCCTACGGTGTACTCCTACACGGGCACCCCCGTGC
ACCATACGCATGCACACATGCACACCTACGCCACGGACCTGACGTGCCCGACACGCCCAGCGCGCGCCCATACACGCGCC
CGACGCGTCTGACCCGTCGCCGCGGCTTATTTGACCAACATGTTATGAACATCCATGTTTTTTTTCAGAACTTTATTGAA
TGTTTTAATTTGAATTTCTTAAGTTAGTAAATCATGGGAGCATATGAGAGGTGATATATATTTAGTGTGTACGGCCGCGG
CCTCTACCAAAACAGTGCCGAATAGGAGCTGACAATGTAAACATCCTTGACTGACTCGAGC------ACGGCACTCAGCA
AGCATACGTTGGCATTGGCCATTTGGTTTGGCCGTTTGGTATAGTTTGGTTTGGTGACATGAAT-----AAATGAATTGG
CGAGTGAGATCCGCAAGAGATGAATGAAGACATGCAGGTCATATTTAGGCTAGCCAGCACCTACTGAAACGCAATGAATG
GATTTGAAGGCACGCGCGCTCGCGCACGTAC-------------------------------------------------
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-------------------------------ACTACTCTACTCTACGTGCTGCACCACACCACCGATAGACTGGTAGCGC
----TGGCATTTACTCAGGCCATGTGATCCTTGCCAGTCTGCATGCCCCGAAAGCCATGCATAAATCCTACCCTCTCCAA
CACACTCCACTCCACTCC----------------ACTCTCCAGTGCACTCCACACACTCTACTAGC----TACCAATGAT
AATGGGCGTGGGGCGTGCAACAAGAAGGATGCAAGGCAGGAGTTCCATGTCGGTCTTGCTGGTGTCGTTGCTGCTGCTGG
CGGCGGCGGCCGGTGTTTCCAGCCGAGCCACGTACACGGGCAGCAGCACCGCAGGTGCCGGTGCAAGTGTGACGACGACG
GCGCCGCCGAAGAAGCATGTTGATGGGAAGAAGCAGCAGGTGCCGGCGCTGGTGGTGTTCGGCGACTCGATCGTCGACCC
GGGCAACAACAACGCCATCAGCACCATCGTCAAGGCCAACTTCGCGCCCTACGGCCACGACTTCGGCGCCGACCACCGCC
CCACGGGCCGCTTCTGCAACGGCAGGATCCCCACCGACTTCATCGCCTCCAGGCTCGGCCTCAAGCAGCTCCTCCCGGCG
TACCTGG------CCCCGAACCTGACGACGCACGACCTGCTCACCGGCGTCAGCTTCGCGTCGGGCGGCACGGGGTACGA
CCCGCTCACG--GCGCAGCTCGCCTCCGTCATCTCCATGACGGACCAGCTCCGCATGTTCCACGAGTACAAGGCCAGGGT
CCGCGCCGCGGCCGGCGACGCCGCGCTCTCGG-------------------------AGATCCTCGCCAGGGGCGTGTTC
GCGGTGTGCGCCGGCAGCGACGACGTGGCCAACACCTACTTCACCATGCGCGCGCGGAGCTCCTACTCGCACGCCTCCT-
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-----------------------------ACGCGTCGCTCATGGTCGCCCACGCC-------------------------
-----------------ACCGCCTTCCTCGACGGCCT-------------------------------------------
-----------------------------GCTGGCCGCGG----------------------------------------
--GCGCCCGCCGCGTCGCCGTCATCTCCATGCCG----------------------------------------------
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-------------CCCATCGGGTGCGTGCCCTCCCAGCGCACGCTCTCGGGCGGCATGGGGCGCGAGTGC----------
---------------TCCCCGGACCACAACGAGATCGCGGAG-----------CTGGTGAACTCGGGAATGGGCACCGCC
GTCG----------------------------------------------------------------------------
-------ACACCCTCAAGGCGAAGTACCCGGGGGCGAGGGTGATGCTGGTGGACATCTACGGGTACCTGCTGGACATGAT
GGTGCGGCCGGACGGGTACGGGTTCAGGGAGTCCACGCTGGGCTGCTGCGGCACGGGCATGATGGAGGTCGCCGTGCTGT
GCAACGGCGTCACGTCGGCGGTGTGCGGGGACGTGGAGGAGTACTTGTTCTGGGACAGCTACCACCCCACCGAGAAGGCC
TACAGGATCCTCGTCGACTACGTCTACGACAACTACCTCAAGGAGCTCATCGCCTAGGCCTACCTATATATCCTTGCTGT
AACCCCTACCTTGCATT--ATTCTCTGGGATTTTCGTTTCCATTCATTGCGTCTGTATTGTGCACGTAGCACCTTGTGAC
AACAATTGTCAATTATTGTTGATCTTTAAGAGGTCATTATCGGCTTGAGATCGGACAGTTAGAAGGAGAGAGAGGTTTGG
TGGAATATGATGGATGTTTTATTCATAGTTTAAAAAACCGAACCGAAAATCGAACTGGAAAGGTTGTCGGTTCAGGTTTT
TACCGGTCGGACCGCCGGTTCACCGGTTCAATTGTTGGTTTTTTTAATAAATAAAATAATACTTTCTCCGTCCGGAAATA
TTTGTCATCAAAATGGATGGAAATGAATGTACCTACAACCAAAATACAACTAGATACATCCATTTCAATGACAAGTATTT
CTGAACGGAGGAAGTATATAAATGTGCTAATATAGAGTGAAACAATGGTCAAATAAAATTATAACCATGTAGTGGACAAC
AAAGTAGCACAACTAAGTTGGTTATTGAGCCATGGGCAGGCCCCGCCTACTGCTCACATGCCATTGGATCGAATCCCACT
TTCCCAATTTCTATTAAAAAAATTCCTGATTTTTCCCGGTTCAATTACCCGGTTTTTTCACCGGTTCTTCAGAAAACCGG
CCAGTTTGATCGGTTTTTTCCGGTTTGAATGCATATCGGTCTTATTAGCTTAAAAACCCGATGAGGCTGCCGGTTCCGGT
TTTTTTCGGTTCGACCGCCGGTCCGGTCCGGTTTTTTAAACTATGGTTTTATTGAGCTTCAAGGACGAGTATATATTGAG
TACATGACTTGTAGGGTAAGAAACCTCTCTTGAAGATAAGGTACTCCCTCCGTCCGGATTTATTAGGCCCCTCAGCCACA
ATAGCATGTCCCGATTTATTAGGCCCTTCTAATTAATTTTCTTGGAATCAAACTCATTCACTTGCGGAGGACCGAAGGGT
ATTAACTAGCCCGTTGCAT
>chr7D_16
---------------GGACACGACGAGGGTTTCCAGCGCACGAACGCCACCGCACGGATGGTC-TTTTTCCATGAGCACG
AACTCAACACCCTGCCGTTACAATGATCACCCGCAGCGTT----------------------------------------
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------------------------------------CTGATACCCGGGCCAGTGCTGGGCCACGACCCGCACGCT-----
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-----------------------------CCTACCCACTTCACCGCCTGGTCCGAC------------------------
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CCGCTCCGTGCGCGCCCACGACGCGCTCTCGCGCGCTCCCCGCACCGAGCCCGCAATAGAGCAGCGCGATCAGCTCGTCC
CCGATCGCCAACGGCCTCGC-----------------------------------------CCTACACGCACGCCTACGG
TGTACTCCAACATGGGCACCCATGTGCACCACACACGCGCACACACACACACCTACGCCGTGGACCCGACGCGCCCGACA
AGCCCAGCGCGCGCCCATACACGCGCTCGACGCGTCCGACACGGCGCCGTGGCTTATTTTTCCCAACACTCACCCCCTAA
GCCGTGGCTCAGAGGAGGCCGCTGTCCTCGACGCCGACGTCCGCCAGCAGTGCCCGCTCCGCCGCTGGCTCCTTTCGCAA
CTGGGGGCACTCACGCTTGAAGTGGCCACGCTCGCCGCATTTTTAGCATCGCCTGCGCCGCTTAAACCCACCGCCCGATG
CCGTGCTCGCCGTGTCGTCGTCGTCGTGGTCGTTGAAGCCGCCACCGCCCTGACGTCGCTGCCACGCCTGCCATTGTGCC
ACCGTGTACATCAGCCAGCCATCCGCCCGCTCGCTGCCAGCTTGTCCGCGCCGTCGCGGCCTCTCCTCAAACGCCTTTAG
CTGCCCGAGGGGTTCCTCGAACGGCATGGAGTTCATGTCGCAGAACTGCTCCATTCCGGTGACGGCGACATACAAGCGAT
CCGGGATAGAGTCCAAAAGCTTCTTCACCATCGACGGATCGTCCAGCGTCGATCCCAGCCCAGTGTAGCGTGCCGCCATG
CCACTGATCTTGCCGGCGAAGGTGTCCAGTGTCTCGCCGTTCTCCATCCGCAGCAGCTTGAAGTCGCTGCGGAGCGTGGT
CAACCGCGCCGCCTTGATGCGATCAGCTCCGATGAACCGCACCTTGAGGCTGCTCCACACCTCCGCCGCCGTCTTCTTGG
ACGCGACCTGCAGCAGAAGATCCTCAGCGAGTGCGCCAAGCAGGTACGCCAGCGCCGGCTTCTTCTTCTTCGCGATCATC
GCCGCCGCCGTGTCCTCCGCCGGCACCATTGCCTCCCACAGCCCGGTCGCATCCAGGTTGGCCTCCACCTTAATCGCCCA
CGTGGTGTAGTTCTCACCAGTGAGGATGGGGACGGGCGCCGGTAGCGAACAACATGATCCGCCGGCGTACGGCACGAGCG
ACATAGCCGGCGATCACCTCCCCGCAGCGAGGCTCTGATACCAAATGTTGTTGCCAAACCAGAAGTAGGAGGAAGAACAA
GAAGACAGGGGACATGACGAGGGTTTCCGGCACACAGACGCCACCGCACGGACGATCTTTTTCATTGAGCACGAACTCAA
CACCCTGTCGTTACAACGATCGCCACAACGTTCTTATTCCCGGGCCAGCGTTGGGCCATGATCCGCACGCTCCTACCCAC
TACACCGCCTTGTCCGGCCTGCTCCGTGTGTGCCCACGACGCGCTCTCGCGCGCTCCCCGCGCCGAGCCCGCAACAGACC
AGCGCGATCACCGCGTCCCCGATCGCCAACGGCCTCGCCCTACACGCACGCCTACGGTGTACTCCTACACGGGCACCCCC
GTGCACCACACGCACGCGCGCGCGCGCACACACACACCACTACGCCGCAGACCCGACGCGCCCGACACGCCCAGCGCATG
CCCATACACGCACTCGACGCGTCCAACACGGCGCCGCGGCTCATTT----------------------------------
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-------------------
>chr1D_536
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-------------------------------------------------------ATATATTTAGAGTGTACGGCCGCGG
CCTCTAGCAAAACAGTGGCGAATAGGAGCTGACAACGT--ACATCCTTGACTGACTCGAGCTCGAGCACGGCAGTCAACA
AGCATGCGTTGGCATTGGCCATTTGGTTTGGCCGTTTGGTATGGTTTGGTTTGGTGACATAAATAAATGAAATGAATTGG
CGAGTGAGATCCGCAAGAGATGAATGCAGACATGCAGGTCGTATTTAGGCTAGCCAACATCTACTGAAACGCAATGAATG
GATTTGACGTACTACTACTC------------------------------------------------------------
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------------------------------------------TACTAGTAGTACGT------------------------
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----------------------------------------CTCTACGTGCTGTACCACACCACCGATAGACTGGTAGCGC
----TGGCATTTACTCAGGCCATGTGATCCTTGCCAGTCTGCATGCGCCGAAATCCATGCATAAATCCTACCCTCTCCAA
CGCACAGCACTCCACTCC---CCACTCCCCTATCACTCTCCAGTGCACTCCACACACTCTGCTAGC----TACCAATGGC
AATGGGCATGGGGCGTGCAACAAGAAGGATGCAGGGCAGCAACTCCGTGTCGGTCTTGCTGGTGTCGTTGCTGCTGGTGG
CGGCGGCGACCGGGGTTTCCAGCCGAGCCACGTACACGGGCAGCAGCACCGCACGTGCCGGTTCAACTGTGACGGCGACG
GCGCCGCCCAAGAAGCATGTTGATGGGAAGAAGCAGCAGGTGCCGGCGCTGGTGGTGTTCGGCGACTCGATCGTCGACCC
GGGCAACAACAACGCCATCAGCACCATCGTCAAGGCCAACTTCGCGCCCTACGGCCACGACTTCGGCGCCGACCACCGCC
CCACCGGCCGCTTCTGCAACGGCAGGATCCCCACCGACTTCATCGCCTCCAGGCTCGGGCTCAAGCAGCTCCTCCCGGCG
TACCTGG------CCCCGAACCTGTCGCGGCACGACCTGCTCACGGGCGTCAGCTTCGCGTCGGGCGGCACGGGGTACGA
CCCGCTCACG--GCGCAGCTCGCCTCCGTCATCTCCATGACGGACCAGCTCCGCATGTTCGACGACTACAAGGCCAGGGT
CCGGGCCGCCGCCGGCGACGCCGCGCTCTCGG-------------------------AGATCCTCGCCAGGGGCGTGTTC
GCGGTGTGCGCCGGCAGCGACGACGTGGCCAACACCTACTTCACCATGCGCGCGCGGAGCTCCTACTCGCACGCCTCCT-
--------------------------------------------------------------------------------
-----------------------------ACGCGTCGCTCATCGTCGCCCACGCC-------------------------
-----------------ACCGCCTTCCTCGACGGCCT-------------------------------------------
-----------------------------GCTCGCCGCGG----------------------------------------
--GCGCCCGCCGCGTCGCCGTCATCTCCATGCCG----------------------------------------------
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-------------CCCATCGGGTGCGTGCCCTCCCAGCGCACGCTCTCGGGCGGCATGGGGCGCGAGTGC----------
---------------TCCCCCGGCCACAACGAGATCGCCGAG-----------CTGGTGAACGCGGGAATGGGCACCGCC
GTCG----------------------------------------------------------------------------
-------AGTCCCTCAAGGCGAGGCACCCGGGGGCGAGGGTGACGCTGATGGACATCTACGGGTACCTGCTGGACATGAT
GGTGCGGCCGGACGGGTACGGGTTCAGGGAGTCCAGGCTGGGCTGCTGCGGCACGGGCATGATGGAGGTCGCCGTGCTCT
GCAACGGCGTCACGTCGGCGGTGTGCGGGGACGTGGAGGAGTACCTGTTCTGGGACAGCTACCACCCCACCGAGAAGGCC
TACAGGATCCTCGTGGACTACGTCTACGACAACTACCTCAAGGACCTCATCGCCTAGGCCTAGCTATATATCCTTGCTGT
AACCCCTACCTTGCA-TGCATTCTCTGGGATTTTCATTTCCATTCATTGCGTTTGTGCTGTGCACATAGCACCTTGTGAC
AGCAATTGTCAATTATTGTTGATCTTCAAGAGGTCATTATCGGCTTGAGATCGGACAG----------------------
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>chr1B_537
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--------------------------------------------------------TATATTTACTGTGTACGCCCATGG
CCTCTAGCAAAACAGTGCACGATAGGAGCTGACAACCT--ACATCCTTGACTGACTCGAGC------ATGGCAGTCAGCA
AGCATGCGTTGGCATTGGCCGTTTGGTTTGGCCGTTTGGTATGGTTTGCTTTGGTGACATGAAT-----AAATGAATTGG
CGAGTGAGATCCGCAAGATATGAATGCAGACATGCAGGTCGTATTTAGGCTAGCCAGCACCTACAGAAACGTAATGAATG
GATCTGAAGGGACGCGCGAGCGCTCGTATATACTCCCTCCGTCCGGTTATAAGAGCAAGTACAATAAGCCTAGTTATAAT
GAGAGTAACATAAGTAGTACTCCCTCCTTCCATCTATATAGGGCCTAATGCGTTTTTTAAGACCGCATTTGACTATTGAC
AAGATTAATAGTACATGACATGTATAATGTGAAAATTATATCATTGAAAGCTCCTTTCACAGACGAATTTAACGGTGTGC
TTTGTGTAAGTTGCATGTCATATATTATTGCTCTAATGTTTGGTCAAAGTTAGCCTCGAAAAACGCATTAGGCCCTACAT
AGATGGAAGGAGGGAGTAACATAGATGCCACATAAGCAAAAAAGATGATGTGTTATGTAATTAAAGAGGAGAGAGACAAA
TAGAATAACATAATATGTTATCATAACATAGCGGTTCCCAATACAAAATGAGTCTACAAAGCAATAAATGAAGACATGTA
TGTTACTCCCTCCGTCCGGGTGTATAAGTCATTCGCGTAGTTCTAGGTCATCGATTTGAGGAATTAAATATGTGTTATAT
GTCATGAAAAGTATACCACTAGATTTCCACACGGATGTAGTTTCTAAATATATATTTTTTGTCACATATAATACATATTT
AGATAGTTAAATTATCGACCTAGAACTACGCGAATGACTTATACACCGGGACGGAGGTAGTACTATACATATGACACTTC
CCACTATGAAGGTAGTAACATGGACTAGTAACGTATGTATGTTACTAGTAGTCTAAGTTACTCCCACTATGACCAGCCTA
AGGTGATGTAGGCGGGCTGTAAGACATTAAATATTATATTCTTGCTTACTTGGAAAAGAGAGGAGAGGAGAGAGAAGAGA
AGCGGGCTACTAGTTAACAGCCGGCTGCAGCACGTGCTCCTAGGTACTTTGTGAGAGAGTGGGGTAGGCCATATATCAAC
AAAGTAGTACATATTTATATCTACCTATTATACTTGTTGACTATAAGCTTGACTATATGTGACATGGCAACATCATATAG
CGAGCAGCTGGCTATAAGTGTGCATCTAGCATACAAATTTGTCCCGGAAAAAGTGTACATCTACACTACACTTCTTATAC
AGTTAATAAATGCAATCACCTCCTAGTAATCGCTGCCCCCACTCTATCCTCCAATCCCATTCTTCTCCCCCGCATCACGC
CCCAATCCTAATTCTTCTCCTCTAATTTAATTGGTGGAGACTAATAAGAGGAGAGAGAACTAATATGTCATCCATTTTCT
AGATGTACACTTGCTACCGGACAGAGGGAGTAGTACTACCTTTGTCCTGGTTTATAGGTCTTCATTGTATTTTATACCAA
ATTTTAACCATATACTCCTATTTAACTAACAAATTGATAATGCATGTCACCAATACTTCCATCATTAGAAACTATGTTCA
AATACGTATTCAATGATATAATTTTTATTGACATGCATTAACATTTTGTAAGTTAAATATTTGATTAAAATTTGGCACAG
AATATAATGAGGACCAATAAACCAGGACAGAGGTACTCTCTTCATTTCATAATGTAGTGCGCCTGCGCTTCCCGAGATCC
AAATTTGATTGTAAATTTAACAAACGACTGCGGTAGGAGCAAAAATTTGTACCTCTGATTTCATATCAAAAATACGAATT
CAATGCTATGATTTTTGCTCCCGTCGCAATCAGTCTTGTTGATTAAATTTACGGTCTAATTTGAATCTTGATAAGCGCAA
GCATACTATATTATGAAATGGAGGGAGTAGTACTCCTCTACTCTACGTGCTGCACCACAGCACCGATAGACCGGTACTAT
GTGTTGGCATCTACTCAGACCACGTGATCCTTGCCAGTCTGCATGCGCCGAAAGCCATGCATAAATCCTCCCCTCTCCAA
CACACACCACTCCACTCCACTCCACTCCCCTACCACTCTCCACTCTCCACTCTAGTGCAGTCTAGTTATTTACCAATGGC
AATGGGCGTGGAGCGTGCAACAAGAAGGATGCAGGGCAGGAACTCCATGTCGGCCTTGCTGGTGTCGTTACTGCTGCTGG
CGGCGGCGGCCGTTGTTTCCAGCCGAGCCACATACACGGGCAGCAGCAGCACC---GCCGGTGCAACTGTGACGGCGACG
GCGGCGCCGAAGAAGCGTGC---TGGGAAGAAGCAGCAGGTGCCGGCGCTGGTGGTGTTCGGCGACTCGATCGTGGATCC
GGGCAACAACAACGCCATCAGCACCATCGTCAAGGCCAACTTCGCGCCCTACGGCCACGACTTCGGCGCCGACCACCGCC
CCACCGGCCGCTTCTGCAACGGCAGGATCCCCACCGACTTCATCGCCTCCAGGCTCGGCCTCAAGCAGCTCCTCCCGGCC
TACCTGG------CCCCGAACCTGTCGCGGCACGACCTGCTCACCGGCGTCAGCTTCGCGTCGGGCGGCACGGGGTACGA
CCCGCTCACG--GCGCAGCTCGCCTCCGTCATCTCCATGACGGACCAGCTCCGCATGTTCGACGAGTACAAGGCCAAGGT
CCGCGCCGCGGGCGGCGACGCCGCGCTCTCGG-------------------------AGATCCTCGCCAGGGGCGTGTTC
GCGGTGTGCGCCGGCAGCGACGACGTGGCCAACACCTACTTCACCATGCGCGCGCGGAGCTCCTACTCGCACGCCTCCT-
--------------------------------------------------------------------------------
-----------------------------ACGCGTCGCTCATCGTCGCCCACGCC-------------------------
-----------------ACCGCCTTCCTCGACGGCCT-------------------------------------------
-----------------------------GCTGGCCGCGG----------------------------------------
--GCGCCCGCCGCGTCGCCGTCATCTCCATGCCG----------------------------------------------
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-------------CCCATCGGCTGCGTGCCCTCCCAGCGCACGCTCTCGGGCGGCATGGGCCGCGGGTGC----------
---------------TCCCCCGGCCACAACGAGATCGCGGAG-----------CTGGTGAACGCCGGGATGGGCACCGCC
GTCG----------------------------------------------------------------------------
-------AGTCCCTCAAGGCGAAGCACCCGGGGGCGAGGGTGATGCTGATGGACATCTACGGGTACCTGGTGGACATGAT
GGTGCGGCCGGACGCGTACGGGTTCAGGGAGTCCACGCTGGGCTGCTGCGGCACGGGCATGATGGAGGTGGCCGTGCTCT
GCAACGGCGTCACGTCGGCGGTGTGCGGGGACGTGGAGGAGTACCTGTTCTGGGACAGCTACCACCCCACCGAGAAGGCC
TACAGGATCCTCGTCGACTTCGTCTACGACAACTACCTCAAGGACCTCATCGCCTAG--CTAGCTATATATCCTTGCTGT
GCTGTAACCCCTGCCTTGCATTCTCTGGGTTTTTCATTTCCATTCATTGCGTATGTGCTGTGCTCGTAGCACCTTGTGAC
AGTAATTGTCAATTAT-GTTGATCTTTAAGAGGTCATTATCGGCTTGAGATCGGACAGTCAG------------------
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>chr5B_1195
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-----------------------------GAAGAAGATGGTGCCGGCTCTGGTCGTGTTCGGCGACTCGATCATGGACCC
GGGCAACAACAACGCCATCCACACCATCGTCAAGGCCAACTTCCCGCCCTACGGCCACGACTTCGGCCCCGACCACAGCC
CCACCGGCCGCTTCTCCAACGGCAAGATCCCCACCGACTTCATCGCCTCCAGGCTCGGCCTCAAGGACCTACTGCCGGCG
TACCTGG------CCCCGGACCTCACCAGCCACGACCTGCTCACCGGCGTCAGCTTCGCCTCGGGCGGCACGGGGTACGA
CCCGCTCACG--GCGCAGCTCGCCTCGGCCATCTCCATGACGGACCAGCTCCGCATGTTCGACGACTACAAGCAGAAGGT
CCGGGCCGCCGCCGGCGACGCCGCGCTCTCGG-------------------------ACATCCTGACCAAGGGCATCTTC
GTTGTGTGCACCGGCAGCAACGACGTGACCAACACCTACTTCACCATGCGCGCGCGCAGCTCCTACTCCCACGCCTCCT-
--------------------------------------------------------------------------------
-----------------------------ACGCGTCCTTCGTCGTCGCCCACGCC-------------------------
-----------------GCCGCCTTCCTCGACGGCCT-------------------------------------------
-----------------------------ACTCTCCGCGG----------------------------------------
--GCGCCCGCCATGTCGCCGTCATCGGCCTCCCG----------------------------------------------
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-------------CCCGTCGGCTGCATGCCCTCTCAGCGCACGCTCTCCGGCGGCATGGCCCGGGACTGC----------
---------------TCCCCCGGCCCCAACGAGATCGCGGAG-----------ATGGTGAACGCCGGCATGGGCTCCGCC
GTGG----------------------------------------------------------------------------
-------AGTTCCTCAAAGCGAACAACCCGGGGGCCAAGGTGGTGCTGGTGGACATGTACGGGTTCTTTATGGACATGAT
GGTGCGCCCCCAGGGGTACGACTTCAGGGAATCCACGCTCGGCTGCTGCGGCATGGGCATGATGGAGGTCTCCGTGCTCT
GCAACGGCGTCACGTCGGCGGTGTGCGGGGACGTCGCCGACTACCTGTTCTGGGACAGCTACCACCCCACTGAGAAGGCC
TACGGGATCCTCGTCGACTTCGTCTACGATAAGTACCTCCAGAAGCTCATCG----------------------------
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>chr5A_1195
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-----------------------------GAAGAAGATGGTGCCGGCGCTGGTCGTGTTCGGCGACTCCATCATGGACCC
GGGCAACAACAACGCCATCCACACCATCGTCAAGGCCAACTTCCCGCCCTACGGCCACGACTTCGGCCCCGACCACCGCC
CCACCGGCCGCTTCTCCAACGGCAAGATCCCCACCGACTTCTTGGCCTCCAGGCTAGGCCTCAAGGACCTGCTGCCGGCG
TACCTGG------CCCCGGACCTCACCAGCCACGACTTGCTCACCGGCGTCAGCTTTGCCTCGGGCGGCACGGGGTACGA
CCCGCTCACG--GC--AGCTCGCCTCGGCCATCTCCATGACGGACCAGCTCCGCATGTTCGACGACTACAAGCAGAAGGT
CCGGGCCGCCGCCGGCGACGCCGCGCTCTCGG-------------------------ACATCCTGGCCAAGGGCATCTTC
GTTGTGTGCACCGGCAG---CGACGTGACCAACACCTACTTCACCCTGCGCGCGCGCAGCTCCTACTCCCACGCCTCCT-
--------------------------------------------------------------------------------
-----------------------------ACGCGTCCTTCGTCGTCGCCCACGCC-------------------------
-----------------GCCGCCTTCCTTGACGGCCT-------------------------------------------
-----------------------------ACTCTCCGCGG----------------------------------------
--GTGCCCGCCATGTCGCCGTCATCAGCCTCCCG----------------------------------------------
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-------------CCCGTCGGCTGCATGCCCTCTCAGCGCACGCTCTCCGGCGGCATGGCCCGGGACTGC----------
---------------TCCCCCGGCCCCAACGAGATCGCTGAG-----------ATGGTGAACGCCGGCATGGGCTCCGCC
GTGG----------------------------------------------------------------------------
-------ACTCCCTCAAAGCGAACAACCCGGGGGCGAAGGTGGTGCTGGTGGACATGTATGGGTTCTTTATGGACATGAT
GGTGCGCCCCCAGGGGTACGGGTTCAGGGAATCCACGCTGGGCTGCTGCGGCACGGGCATGATGGAGGTCTCCGTGCTCT
GCAACGGCGTCACGTCGGCGGTGTGCGGGGTCATTGCCGACTACCTGTTCTGGGACAGCTACCACCCCACGGAGAAGGCC
TACGGGATCCTCGTCGACTTCGTCTACGACGAGTACCTCCAGAAGCTCATCG----------------------------
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>chr6A_1200
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----------------------------------AGCAGGTGCCTGCGCTGGTGGTGTTCGGCGACTCCATCGTGGACCC
GGGGAACAACAACGCCATCCACACCATCATCAAGGCCAACTTCCCGCCCTACGGCCACGACTTCGGCGCCGACCACCGCC
CCACCGGCCGCTTCTGCAACGGCAGGATCCCCACCGACTTCATCGCCTCCAAGCTGGGGCTCAAGCAGCTGCTCCCGGCA
TACCTGCAGCAGTCCCCGAACCTCACCGCCCACGACCTGCTCACCGGCGTCAGCTTCGCGTCGGGCGGGACCGGCTACGA
CCCGCTCACG--GCGCAGCTCGCCTCCGTCATCTCCATGACGGACCAGCTCCGCATGTTCGACGAGTACAAGGCCAAGGT
CCGGGCCCTCGCCGGCGACGCCGCTCTCTCGG-------------------------AGATCCTCTCCAAGGGAGTCTTT
GCGGTGTGCGCCGGCAGCGACGACGTGGCCAACACCTACTTCACCATGCGAGCGCGGAGCTCCTACTCGCACGCCGACT-
--------------------------------------------------------------------------------
-----------------------------ACGCGTCCCTCATCGTGTCCCACGCC-------------------------
-----------------GGCGCCTTCCTCGACGGCCT-------------------------------------------
-----------------------------GCTCTCCGCGG----------------------------------------
--GGGCCAAGCGAGTGGCCATCATCTCCATGCCG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCCATCGGGTGCGTGCCGTCCCAGCGCACGCTCTCGGGCGGCATGGCGCGGGACTGC----------
---------------TCGTCGGGCCACAACGAGATCGCCGAG-----------ATGATCAACGCCGGCATGGGCACCACC
GTGG----------------------------------------------------------------------------
-------AGTCGCTCAAGGCCAAGCACCCGGGGGCGAGGGTGGTGCTCATGGACATATACGGGTACTTGTTGGACATGAT
GATGCGCCCGGAGGGGTACGGGTTCAAGGAGTCCACGCTGGGCTGCTGCGGCACGGGCATGATGGAGGTCTCCGTGCTGT
GCAACGGCGTCACGTCGGCGGTGTGCGGCGACGTCACCGACTATTTGTTCTGGGACAGCTACCACCCCACGGAGAAGGCG
TATCGTATCCTCGTCGACTTCGTCTACGACAACTACCTCAAGGAGCTCATCGACT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr6D_1200
--------------------------------------------------------------------------------
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----------------------------------AGCAGGTGCCTGCGCTGGTGGTGTTCGGCGACTCCATCGTGGACCC
GGGGAACAACAACGCCATCCACACCATCATCAAGGCCAACTTCCCGCCCTACGGCCACGACTTCGGCGCCGACCACCGCC
CCACCGGCCGCTTCTGCAACGGCCGGATCCCCACCGACTTCATCGCCTCCAAGCTGGGGCTCAAGCAGCTCCTCCCGGCC
TACCTGCAGCAGTCCCCGAACCTCACCACCCACGACCTGCTCACCGGCGTCAGCTTCGCGTCGGGCGGGACCGGCTACGA
CCCGCTCACCGCGC--AGCTCGCCTCCGTCATCTCCATGACGGACCAGCTCCGCATGTTCCATGAGTACAAGGCCAAGGT
CCGGGCCCTGGCTGGCGACGCCGCTCTCTCGG-------------------------AGATCCTCTCGAAGGGAGTCTTC
GCGGTGTGCGCGGGCAGCGACGACGTGGCCAACACCTACTTCACCATGCGCGCCCGCAGCTCCTACTCGCACGCCGACT-
--------------------------------------------------------------------------------
-----------------------------ACGCGTCCCTCATCGTGTCCCACGCC-------------------------
-----------------GGCGCCTTCCTCGACGGCCT-------------------------------------------
-----------------------------GCTCTCCGCGG----------------------------------------
--GGGCCAAGCGAGTGGCCATCATCTCCATGCCG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCCATCGGGTGCGTGCCGTCCCAGCGCACGCTCTCGGGCGGCATGGCGCGGGACTGC----------
---------------TCGTCGGGCCACAACGAGATCGCCGAG-----------ATGATCAACGCCGGCATGGGCACCACC
GTGG----------------------------------------------------------------------------
-------AGTCGCTCAAGGCCAAGCACCAGGGGGCGAGGGTGGTGCTCATGGACATCTACGGGTACTTGTTCGACATGAT
GATGCGCCCGGAGGGGTACGGGTTCAAGGAGTCCACGCTGGGCTGCTGCGGCACCGGCATGATGGAGGTCTCCGTGCTCT
GCAACGGTGTTACGTCGGCGGTGTGCGGCGACGTCACCGACTATTTGTTCTGGGACAGCTACCACCCCACGGAGAAGGCG
TATCGTATCCTCGTCGACTTCGTCTACGACAACTACCTCAAGGAGCTCATCG----------------------------
--------------------------------------------------------------------------------
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-------------------
>chr6B_1200
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----------------------------------AGCAGGTGCCTGCGCTGGTGGTGTTTGGCGACTCCATCGTGGACAC
GGGCAACAACAACGCCATCCACACCATCGTCAAGGCCAACTTCCCGCCCTACGGGCACGACTTTGGCGCCGACCACCGCC
CCACCGGCCGCTTCTGCAACGGCAGGATCCCCACCGACTTCATCGCCTCCAAGCTGGGGCTCAAGCAGCTGCTCCCGGCC
TACCTGCAGCAGA------ACCTAACAAAACAGGACCTGCTCACCGGCGTCAGCTTCGCGTCGGGAGGAACAGGCTACGA
CCCGCTCACG--GCACAGCTCGCCTCCGTCATCTCCATGACGGACCAGCTCCGCATGTTCCACGAGTACAAGGCCAAGGT
CCGGGCCCTCGCCGGCGACGCCGCTCTCTCGG-------------------------AGATCCTCTCGAAGGGAGTCTTC
GCGGTGTGCGCCAGCAGCGACGACGTGGCCAACACCTACTTCACCATGCGGGCGCGCAGCTCCTACTCGCACGTGGACT-
--------------------------------------------------------------------------------
-----------------------------ACGCGTCCCTCATCGTGTCCCACGCAT------------------------
------------------CCACCTTCCTCGACGGCCT-------------------------------------------
-----------------------------GCTCTCCGCGG----------------------------------------
--GGGCCAAGCGGGTGGCCATCATCTCCATGCCG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCCATCGGGTGCGTGCCGTCCCAGCGCACGCTCTCGGGCGGCCTTGGACGGGACTGC----------
---------------TCGTCGGGCCACAACGAGATCGCCGAG-----------ATGATCAACGCCGGTATGGGCACCACG
GTGG----------------------------------------------------------------------------
-------AGTCTCTCAAGGCCAAACACCCGGGGGCGAGGGTCGTGCTCATGGACATCTACGGGTACTTGTTCGACATGAT
GATGCGCCCGGAGGGGTACGGGTTCAAGGAGTCCACCCTGGGCTGCTGCGGCACGGGGATGATGGAGGTCTCCGTGCTCT
GCAACGGCGTCACGTCGGCGGTGTGCGGCGACGTGACCGACTATTTGTTCTGGGACAGCTACCACCCCACGGAGAAGGCG
TACCGGATCCTCGTCGACTTCGTCTACGACAACTACCTCAAGGAGCTCATCGACTAG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>SNPs
SSSSSSSSSSSSSSS-------S-S---------S------S---S----S---S---S----S-------S-------S
-----------------------S----S--SSSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
------S----------------------------S--SS---------------------------------S------
-----S------------------------------------S-------------------------------------
--------------------------S-------------S---------------------------------------
----------S-------SS---S-SSS--S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
----------------------------------------------S---------------------------------
-----S------------------------------------------------------S-----------------SS
---------------------------------S-------SS-------------------------------------
-----------------------------------------------------S------------S-------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------S--------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-----------------------------------S----------------S---SS----------------------
-S---------------------------------------------------------S--SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS
>forward_312
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GTGTACTCCTACACGGGCAC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>reverse_5050
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--------------------------------------------------------------------------------
---------ACCCTCAAGGCGAAGTACCC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_2843
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------GAAGGATGCAAGGCAGGAGT-------------------------------------
--------------------------------------------------------------------------------
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-------------------
>reverse_5594
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AGGTTTT
TACCGGTCGGACC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
