>input_sequence_58164
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CCGCAAGTACCACGTCGCAGATGCCGCATTAGCTCCGAAAATC
CAAAACCATTCCTCCCCACCCACCCCGACCTCGCTCCCCCCCGCGGCGA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CGGCGGCCATGACGACC
GGATCCAACGCCGACCACTACGGCCCGCCCTCCTACCCGCAGCGCCGCCCGCACTACGGGGGCGCCCCGCCCTCCTACGG
CTCCTCGGCCTCCTTCCGCGGCTGCTGCTGCTGCATCTTCATGCTCGTCATCTTCCTCGCCCTCCTGGCCCTCGCCGTCG
CGCTCGTCGTCGTCCTCGCCGTCAAGCCCCGCAAGCCCCAGTTCGACCTCAACCAGGTCGCCGTCCAGTACCTCCTCGTC
GCCCCGCCGTCCCCGG------CCGCGTCGCCGAACGTCGCCGCGGCCCCCGCCGCCGCCTACCTCTCCCTCAACATCAC
GCTCCTCTTCACCGCCGTGAACCCCAACAAGGTGGGCATCCGCTACGCCGCCACGGCGTTCGACGTCATGTACCACGGGG
TGCCGCTCGGGGTGGCGGCCGTGCCCGGGTTCGAGCAGCCCGCGCACAGCACCCGCCTGCTCCAGACCCGCGTCATCGTC
GACCGCTTCAACGTCCTCCAGTCCGACGCCCAGGACCTCATCCGCGACGCCGCGCTCAACGACCGCGTCGAGTTCCGCAT
CACCGGCGACGTCGCCGCCAAGATCCTCGTGCTCGGCTTCTCCTCCCCCAAAGTCCAGGTAAAATTTTACCACCGCAATC
CTGCACCCGGAAC-AAACTTTTTTG------TTCTCTTCCTCCGCAAGCTCTGGGCTGATCGAAAGGGACT----CGTGA
ACAAAACCTGCAGGTGTCGGTGGACTGCGCGATCGACATCAGCCCCAAGAGGCAGTCGGTGACATACAAGCAATGCGGCG
TGGACGGGCTAAGCGTGTAGGCAGCAAGCGAACCAAACCAACCTCGCCGCCGCCG------CAACACCGCAGAAGCGGAG
GCTACTGGTATTAATCTAGTGGGGATAGATATATGTGGATGGGAATCTGTACGTCGATTCTAGTCTCTAATCTCGGGTTT
TGATTCCTTTACTGCGCGTGGGG-CCGGGTAAATTTTGAGCTCTCACCTCTCCTCGCCTTAGTAGGTTGAGGTTACCACT
GATTCTTGTGAATTATTGCTGGATGCCATTAGCAGTGAGTATATAAATCAGTCGCCATGGT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr4D_1_TraesCS4D01G216700
ACTCCCCCCACTAGTTTCCCAACACCAGCGTCGGTGGGCATAAAATGCTAGGGGGCGACAAACCGGCCATACCACAATAT
CCCATTCCAAGCATGTCAATCCGTTGAAGCGCCACCCCATCATCAATGTCCTCGACGAGGAGAATGAGCCGAAGCAGGCC
AGAGAGCAAGAACGACCTCGTGCCGCCGAGCAAGAATGAGACATCTTCGTC----------------------GCAACGC
AGAGCAAGATTAGCAATCCGTTGCCGCGCAAGAGCACTATAGCACCACCGAGCAACGGCTGCGGAGCACCGCACTGACTG
AGCGGCGCCATACCACCATCCCAGGGAGCCGCCCCGCCGCGCCGATGAAGTGCCAATGTTGACCCCCTGCGTAGCCGATG
ACCACCACAACGTTGCACGCGAACCTGCCTTCCGTGGATGCGATGAGCCGAAGACACCCCCGCCACCATCTGTCGCACGG
GCTTTGCCCGACAACCTCCTCTAATGGCGGCGAGAAGGGGAGAAAGGATGGAGAAGGTGGCGGCGGCTAGGGTTTATCCA
CTCGCATGTGCCGCTCAAGTTTGATA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGAGAATTGGGCAGATATTTAAAACGTATTA
TCCAAGATTCAGAAAACACGGGACAGCCGATTACTACTAAAAGACCTTTCTAATC--TATACTTTGCTCTCTTGGCCCTG
CTTCAGTTTTTTTGGAGTACAACAGATCCTGCTCCA-TTGCGTGCTGAAATTAGGTTCGGCGCCCCGAAAGAAAAA--AA
ACAGGTTCGGCGGTGTCGACAGCGACGCAAGCCCGGTATTCTTTTTCTGCAAATGCCGAGCCGAATG-AACCGGAGCACG
AGAGAACAAACAAACAAA----GCT-----CCCCCCACTAAACACACGGCCCCACCACTTATTTACACCCACTTCTGGGC
TTCTGCCAAAGCCCGTAAATCGTAATCACCTCCC--GACTTTCCCCTCTTCCTTCCATCCCACTCG--------------
-CACCACCACCTTCCCCCACACATCAATCGCAAACCCCCGCAAGTACCACGTCGCAGATGCCGCATTAGCTCCGAAAATC
CAAAACCATTCCTCCCCACCCACCCCGACCTCGCTCCCCCCCGCGGCGA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CGGCGGCCATGACGACC
GGATCCAACGCCGACCACTACGGCCCGCCCTCCTACCCGCAGCGCCGCCCGCACTACGGGGGCGCCCCGCCCTCCTACGG
CTCCTCGGCCTCCTTCCGCGGCTGCTGCTGCTGCATCTTCATGCTCGTCATCTTCCTCGCCCTCCTGGCCCTCGCCGTCG
CGCTCGTCGTCGTCCTCGCCGTCAAGCCCCGCAAGCCCCAGTTCGACCTCAACCAGGTCGCCGTCCAGTACCTCCTCGTC
GCCCCGCCGTCCCCGG------CCGCGTCGCCGAACGTCGCCGCGGCCCCCGCCGCCGCCTACCTCTCCCTCAACATCAC
GCTCCTCTTCACCGCCGTGAACCCCAACAAGGTGGGCATCCGCTACGCCGCCACGGCGTTCGACGTCATGTACCACGGGG
TGCCGCTCGGGGTGGCGGCCGTGCCCGGGTTCGAGCAGCCCGCGCACAGCACCCGCCTGCTCCAGACCCGCGTCATCGTC
GACCGCTTCAACGTCCTCCAGTCCGACGCCCAGGACCTCATCCGCGACGCCGCGCTCAACGACCGCGTCGAGTTCCGCAT
CACCGGCGACGTCGCCGCCAAGATCCTCGTGCTCGGCTTCTCCTCCCCCAAAGTCCAGGTAAAATTTTACCACCGCAATC
CTGCACCCGGAAC-AAACTTTTTTG------TTCTCTTCCTCCGCAAGCTCTGGGCTGATCGAAAGGGACT----CGTGA
ACAAAACCTGCAGGTGTCGGTGGACTGCGCGATCGACATCAGCCCCAAGAGGCAGTCGGTGACATACAAGCAATGCGGCG
TGGACGGGCTAAGCGTGTAGGCAGCAAGCGAACCAAACCAACCTCGCCGCCGCCG------CAACACCGCAGAAGCGGAG
GCTACTGGTATTAATCTAGTGGGGATAGATATATGTGGATGGGAATCTGTACGTCGATTCTAGTCTCTAATCTCGGGTTT
TGATTCCTTTACTGCGCGTGGGG-CCGGGTAAATTTTGAGCTCTCACCTCTCCTCGCCTTAGTAGGTTGAGGTTACCACT
GATTCTTGTGAATTATTGCTGGATGCCATTAGCAGTGAGTATATAAATCAGTCGCCATGGT---TCTTCCATGGCCGTTG
CTTAGGAGCAAAGG-AAGTGGTGCGGGGCTAAAGGCGAGGAGCGAGTGGAATCTGACCGACCCCTTTCCGCTCGCTGCTC
CTTGCTGTTC---------GCGTCCGTAGAATGGTTTCCCTTCGCGTGTTTGTTCGCT---TGGGGTGGGAGTCGGTGGG
GAACTGCGCTGTCCGACGCACATCGCCACGCCCTTGCTCTGCTTCAGCCGGTAGTGGTGGAGGTGCCGGGTGCGCCATGG
AAACGCGAGCAGGAGGCGACGAGCTCGTACGGTTGGTTTCCTGCTTCCATGGTGCCATTTCGTCGTGGT-GGGGCCAGAC
CGTCAAAGGCAGCTGTACGG---TTACTTCCTTGGAGCGTGGGATGGGCAGCTTGGCATTGCGTGGAAAAAGTTTGTTTG
AAGTTGAAATTTGACGTTCCATTCCGTGCGACGCTTGTCGACAGACGACAGGAATATGCTAGTACTACGTGTTTTGATTA
TTTAGAAAATGGTGGGA-TCTACAGCCGACCGGATGTTAAACCGTGTTAAACTAGGGGATGAAGATGGGTTTTTCTGACA
ACGAATCTCAGTTTGCACATGGCATGACATG-----GTTTTTGTGATTCTGTGCGAGACTTCCAGTCATCATTGTGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCAAGTTTCATCAAAAGT
TGTA------CTATAATAGCACTGTGTGCCTGTTACAAGTTGTTCATCAGACT
>chr4A_1
ACTCCCCCCATCGGTTTCCCACCACCAACGTCAGTGGGCACAAAATGCTAGGGG-CGACACACCGGCCATGCCTTAGTAT
CTCATTTCAAGCATGTCAATTCGCCGAAGCGCCGCGCAATCATCAATCTCCTCGACGAGGAGAACGAGCCGGAGTAGGCC
GGAGAGCAAGAACGACCTCGTGTCGTCGAGCAAGCGCGAGACATCTTCATC----------------------GCAACGC
AGAGCAAGATCAGCAACCCGTTGCCGCGCAAGAGCACTATAGCGCCACCGAGCAACGGCTGCGGAGCACCGCACTGACTG
AGCGGCGCCATACCACCATCCGAGGGAGCCGCCCCG--------ATGAAGTGCCAATGTTGAGCCCC-GCGTAGCTGACG
ACCACCACAACATTGCACGTGACCCCGCCTTCCGCTGTTGCGATGAGCCGAAGACACCCCTGCCACCGTCTGCCACACGG
GCTTTGCCCGACAACCTCCTCTAATGGCGGCGAGAAGGAGAGAAAGGATGGAGAGGGTGGGGGCGGCTAGGGTCTGACCA
CTCGCCCGTGCCGCTCAAGTTTGATACTCCCTCCGTTCCTAAATATAGGGTGTATAGTTTTTGGCACGGAAATTAAAGAA
ACACATGTGGATGGAAAATTTCACAAGTTTTGGGCAAGATTACACCTGACTAATTGACATGAAAAAATAGAGGAGCTTGC
CCTATATAAGGAAATGTAATCAAATACCTTCAAAAATTATTCAAACGAGTGGTGAAATGCAATGCACCCTATATTTTGGA
CTTTTTCTAAAAAAATCTATACACGTTGTATCAAGGAACGGAGGGAATATGAGATTTGGACAGAGATTTAAAACGTA-CA
TCCAAGATTTAGAAAACACGGGACACCCGATTAA---TAAAAGACATTTCTAATCTATATACTTTGCTCTCTTGGCCCTG
CTTCATCTTTTTCGGAGTACAACAGATCCTGCTCCATTTGCGTGCTGAAATTAGGTTCGGCGCCCTCCAAAGAAAAAGAA
ACAGGTTCGGCGGTGTCGACAGCGACGCAAGCCCGGTATTC-TTTTCTGCAAATCCCGAGCCGAATAAAACCGGAGCACG
AGAGAACAAACAAACAAACAAAGCT-----CCCCCCACTAAACACGCGGCCCCACCACTT--------------------
--CTGCCAAGCCCTGTAAATCGTAATCACCTCCCTAGACTTTCCCCTCTTCCTTCCGGACTTCCTTCCACCCCACTCGCA
CCACCACCACCTTCCCCCACACATCAATCGCAAACCCCCGCAAGTACCACGTCGCAGATGCCGCATTAGCTCCGAAAATC
CAAAACCATTCCTCCCCACCCACCCCCACCTCGCTCCCCCCGGCGGCGA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CGGCGGCCATGACGACC
GGATCCAACGCCGACCACTACGGCCCGCCCTCCTACCCGCAGCGCCGCCCGCACTACGGGGGCGCCCCGCCCTCCTACGG
CTCCTCGGCCTCCTTCCGCGGCTGCTGCTGCTGCATCTTCATGCTCGTCATCTTCCTCGCCCTCCTCGCCCTCGCGGTCG
CGCTCGTCGTCGTCCTCGCCGTCAAGCCCCGCAAGCCGCAGTTCGACCTCAACCAGGTCGCCGTCCAGTACCTCCTCGTG
GCCCCGCCCTCCCCGGCCGCGTCCGCGTCGCCGAACGTCGCCGCGGCCCCCGCCGCCGCCTACCTCTCCCTCAACATCAC
GCTCCTCTTCACCGCCGTGAACCCCAACAAGGTGGGCATCCGCTACGCCGCCACGGCGTTCGACGTGATGTACCACGGGG
TGCCGCTCGGGGTGGCGGCCGTGCCCGGGTTCGAGCAGCCCGCGCACAGCACCCGCCTGCTCCAGACCCGCGTCATCGTC
GACCGCTTCAACGTGCTCCAGTCCGACGCCCAGGACCTCATCCGCGACGCCGCGCTCAACGACCGCGTCGAGTTCCGCAT
CACCGGCGACGTCGCCGCCAAGATCCTCGTGCTCGGCTTCTCCTCCCCCAAAGTCCAGGTAAAAATCTACCTACCACC--
-----CCCGGAAC-CAACCTTTTTTGTTCGCTTCCCTTCCTCCGCAAGCGCCGGGCTGATCGAAAGGGACTCCGTCGTGA
ACAAAACCTGCAGGTGTCGGTGGACTGCGCGATCGACATCAGCCCCAAGAGGCAGTCGGTGACATACAAGCAATGCGGCG
TCGACGGGCTAAGCGTGTAGGCAGCAAGCGAACCAGGCCAACCTCGCCGCCGCCGCCGCG---ACACCGCAGAAGCGGAA
GCTACTGGTATTAATCTAGTGGAGATAGATATATGTGGATGGGAATCTGTACGTCGATTCTAGTCTCTAATCTCGGGTTT
TGATTCCTTTACTGCGCGTGGGGGCCGGGTAAATTTTCTCACCTCACCTCACCTCACCTTAGGAGGAGGAGGTTACCGCT
GATTCTTGTGAATTATTGCTGGATGCCATTAGCAGTGAGTATATAAATCAGTCGCCATGGTTCTTCTTCCATGGCCGTTG
CTTAGGAGCAAAGGGAAGTGGTGCGGCGCTAAAGGCGAGGGGCGAGTGGAATCTGACCGGCCCCTTTCCGCTCGCTCCTC
CTCCTTGTCC---------GCGTCCGTGGAATGGTTTCCCTTCGCGTTTTTGGGTGGGCCGTGGGGTGGGAGTCGGTGGG
GAACTGCGCTGTCCGACGCACACCGCCACGCCCGTGCTCTGCTTCAGCCGGTAGTGGTGGAGGTGCCGGGTGCGCCATGG
AAACGCGAGCAGGAGCCGACGAGCTCGTACGGCTGGTTTCCTGCTTCCACGGTGCCGTTTCGTCGTGGTGGGGGCCAGAC
CGTCAAAGGCAGCTGTACGGCGGTTACTTCCTTGGAGCGTGGGATGGGCAGCTTGGCATTGCGTGGAAAAAGTTTGCTCC
AAGTTGAAATTTGACGTTCCACTCCGTGCGACGCTTGTCGACAGACGATAGGAATAT-ACGTGTTTTTCAGTATTGAAAA
ATTAGAAAATGGTGGGA-TCTACAGCCGACCGGATATTAAACCTTGTTAAACTAGGGGATGAAGATGGGTTTTTCTGACA
GAGAATCTCAGTTTGCACATGGCATGACATG------TTTTTTTGAATCTGTGCGAGACTTCCAGTCATCAGTGTGTTGA
TGCACAAGCTTGTCGTGCCATCGAATTGCTTCTTTTTTCCTCTATTGGTGGTTGGGGAAAAGGATTGTCCTACATTCGTT
CGTGTATTAAATTTTGTTGTCACG--------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TCTTCAAGTTTCATCAAAAGA
TGTAGGAGTACTATAATAGCACTGTGTGCCTGTTACAAGTTGTTCATCAGACT
>chr4B_1
ACTCCCCCCATCGGTTTCCCACCACCAACGTTATTGGGCTTAAAATGCTAGGGGGCAACACACCGGCCATACCGCAGTAT
CCCATTCCAAGCATGTCAATCCGCCTAAGCGTCGCCCCATCATCAATCTCCTCAACGAGGAGAACAAGTCGGAGCAGGCA
AGAGATCAAGAGCGACCTCGCGCTACCGAGCAAGAGCGAGACATCTTCGTCAATGTCTGCAGACATCTTCCTTGCAACAC
AAAGCAAGATCCGCAACCCGTTGCCGCGCAAGAGCACTATAGCGCCACCGAGCAACGGCTGCGGAGCACTGCACTGACTG
AGCGGCGCCATACCACCATCCCAGGGAGCCGCCGCGCCGCGCCGATGAAGTGCCATTGTTGATCCCCTGCGTAGCTGACG
AGCACCACAACGTTGCACGCGAACCCGCCTTCCGTGGTTGCGATGAGCCGAAGACACCCC-GCCACCATCTGCCGCACGA
GCTTTGCCCGACAACCTCGTCTAATGGCGGCTGGAAGGGGAGA-AGGATGGAGAGGGTGGCGGCGGCTAGGGTTTGACCA
CTCGCCTGTGTCGCTCAAGTTTGATA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGATAATTTGACAGAGATTTAAAACGTA-TA
ACCAAGATTTAGAAAACACGGGACACCCTAT---TACTAAAAGACCTTTCTAATC--TATACTTTGCTCTCTTGGCCCTG
CTTCAGTTTTTTTGGAGTACAACAGATCCTGCTCCATTTGCGTGCTGAAATTAGGTTCGGCGCCCCCCAAAGAAAAAGAA
ACAGGTTCGGCGGTGTCGACAGCGACGCAAGCCCGGTATTC-TTTTCTGCAAATCCCGAGCCGAATGAAACCGGAGCACG
AGAGAACAAACAAACAAACAAACAAAGCTCCCCCCCACTAAACACACGGCCCCACCACCTATTTACACCCACTTCCGGGC
TTCTGCC-AAGCCCGTAAATCGTAATCACCTCCCTAGACTTTCCCCTCTTCCTTCCACGG----TTCCACCCCACTCGCA
CCACCACCACCTTCCCCCACACATCAATCGCAAACCCCCGCAAGTACCACGTCGCAGATGCCGCATTAGCTCCGAAAATC
CAAAACCATTCCTCCCCACCCACCCCCACCTCGCTCCCCCCGCGGCGACGGCGGCCATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCGGCCATGACGACC
GGATCCAACGCCGACCACTACGGCCCGCCCTCCTACCCGCAGCGCCGCCCGCACTACGGGGGCGCCCCGCCCTCCTACGG
CTCCTCGGCCTCCTTCCGCGGCTGCTGCTGCTGCATCTTCATGCTCGTCATCTTCCTCGCCCTCCTCGCCCTCGCCGTCG
CGCTCGTCGTCGTCCTCGCCGTCAAGCCCCGCAAGCCCCAGTTCGACCTCGACCAGGTCGCCGTCCAGTACCTCCTCGTC
GCCCCGCCCTCCCCGGCCGCC------TCGCCGAACGTCGCCGAGGCCCCCGCCGCCGCCTACCTCTCCCTCAACATCAC
GCTCCTCTTCACCGCCGTGAACCCCAACAAGGTGGGCATCCGCTACGCCGCCACGGCGTTCGACGTCATGTACCACGGGG
TGCCGCTCGGGGTGGCGGCCGTACCCGGGTTCGAGCAGCCCGCCCACAGCACCCGCCTGCTCCAGACCCGCGTCATCGTC
GACCGCTTCAACGTGCTCCAGTCCGACGCCCAGGACCTCATCCGCGACGCCGCGCTCAACGACCGCGTCGAGTTCCGCAT
CACCGGCGACGTCGCCGCCAAGATCCTCGTGCTCGGCTTCTCCTCCCCCAAAGTCCAGGTAAAATTTTACCACCGCAATC
CCGCACCCGGAACCAACCTTTTTTG------TTCGCTTCCTCCGCAAGCTCTGGGCTGATCGAAAGGGACT----CGTGA
ACAAAACCTGCAGGTGTCGGTGGACTGCGCGATCGACATCAGTCCCAAGAGGCAGTCGGTGACATACAAGCAATGCGGCG
TGGACGGGCTAAGCGTGTAGGCAGCAAGCGAACCAAGCCAACCTCGCCGCCGCCGCCGCCGCAACACCGCAGAAGCGGAA
GCTACTGGTATTAATCTAGTGGGGATAGATATATGTGGATGGGAATCTGTACGTCGATTCTAGTCTCTAATCTCGGGTTT
TGATTCCTTTGCTGCGCGTGGGGGCCGGGTAAATTTTGAGCTCTCACCTCACCTCGCCTTAGCAGGTTGAGGTTACCACT
GATTCTTGTGAATTATTACTGGATGCCATTAGCAGTGAGTATATAAATCAGTCGCCATGGTTCTTCTTCCATGGCCGTTG
CTTAGGAGCAAAGG-AAGTGGTGCGGGGCTAAAGGCGAGGAGCGAGTGGAATCTGACCGACCCCTTTCCGCTCGCTCCTC
CTCCTTCTCCTTGTTGTCCGCGTCCGTGGAATGGTTTCCCTTCGCGTGTTTGGGTGGGCC-----GTGGGAGTCGGTGGG
AAACTGCGCTGTCCGACGCACACCGCCACGCCCGTGCT-TGCTTCAGCCGGTAGTGGG---GGTGCCGGGTGCGCCATGG
AAACGCGAGCAGGAGCCGACGAGCTCGTGCGGTTGGTTTCCTGCTTCCACGGTGCCA-----TCGTGGTGGGGGCCAGAC
CGTCAAAGGCAGCTGT---GCGGTTACAACCTTGGAGAGTGGGATGGGCAGCTTGGCATTGCGTGGAAAAAGTTTGTTTG
AAGCTTAAATTTGACGTTCCATTCCTTGCGACCCTTGTCGACAGACGACAGGAATATTACGAGTTTTTCAGTATTTAG--
--TAAAAAATGGTGGGAGTCTACAGCCGACCGGATATTAAACCTTGTTAAACTAGGGGATGAAGATGGGTTTTTCTGACA
ACGAATCTCAGTTTGCACATGGCATGACATGACATGGTTTTTGTGAATCTGTGCGAGACTTCCAGTCATCAGTGTG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>SNPs
----------SSS--------S-----S----S---------------------------S------------S--S---
-----------------------SS--------S-------------S----------------S------S--------
-----------------------------------SS-------------------------------------------
----------S-----S--------------------------S------------------------------------
--------------------------------------------------------------S------------S--S-
-------------------------S-----------S----------------------S-----------S-------
------------------------------------------------------S--------------------SS---
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S----S------------S--
---------S---------------S-------S----------------------------------------------
------------------------------------------------------------------SS--SS--------
-----------------------------------------S------------S-------------------------
---------------------------------------------------------------------------S----
---------------------------------------------------------SS-SS-SSS--------------
--------------------------------------------------------------------------------
--------------------------S--------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
-S--------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------S-----------S-----------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--SSS---S------------------S------------------------SSS-SS----------------------
----------------------S----------S----------------------------------------------
---------------S---------------------------------S------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SSSSSSSS-SSSS--S----SS-
S----------------------------------S-------S------------------------------------
----------------------------------------------S------------------------S----SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S
-----------------------------------------------------
>forward_61
-----------------------------------------AAAATGCTAGGGGGCGACAA-------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_2322
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGCACCCGGAACAAACTTTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_77
---------------------------------------------------------ACAAACCGGCCATACCACAA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2560
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GCTACTGGTATTAATCTAGTGGGG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1261
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TCCCCTCTTCCTTCCATCCC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2889
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TCGCGTCCGTAGAATGGTTT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
