>input_sequence_58086
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-----ACCATCTAAACCCTAGCTAGCCGCCGCCGCTCCCTGATCGACTGCTCTCTCCTCGACCTTCACCTTTGCACACCG
CCGCTGAGCGCCTGC--GCCGTGACTTAAAATGCCTCGCCGCCAGCGGGCGGCGATG---TCGTCGGAATCGGATGATGC
TAGTGCGCCGGAGTGGGGATCGGAGGATGAGGATGAC------------GATGACGAGATAGCTGCACAGGGGGCAGCCG
CAGCGACTTTGGCGGCGGGGTTACCGATCAAGCTCGTGATCGACACCAAGACTCAGAAGGTGCGGTTCGCCGAGGCCGGA
AGCGACGTCGTGGAGTTCCTCACCGGCCTCCTGTCCCTGCCGCTGGGCACCGTCGTCGACCTGCTGACCAAGGAGCGCAT
GGTCGGCAGCATCGGCAACGTCCCCGGCAGCGTGGAGAAGATGGACGCCGGCTACAAGGGCAAGGAGCGGCGCCTCAGCC
CGGCCGTCACCCCCGCCGCGCTCTCCCGCCTGCAGCAGCTGCTGAGCGCGCACCTCATCAACGGCCGAACCTGCTGCCAT
TGCACCAGTTCCACGTACAATGC---------TGCCGCCGCGGGAACATCCACGACGCCGTCGCTACCCACGGCCACGTA
CACTGTCGGGGACGACCTCTCGGTGACTCCGGCTTCTTTTTTCACGACCATGTCGCTTC--TGGGCATCGCGCAGTTCGC
ACAATTTGGTGGCG---AGGACCTCAGCACGCTGCAGGAGAAAACCGTGAAGATCGGCAAGGAAGAGGTATGTACGTGGC
GTCCTTCGGTTTCTGACTAGGACTTTTGAACTGCTGGTGATTGATTTTATTTTCCCCTGCATGCGTTGGAATTTTG--TA
GGCGCTGAGGATACTCGCTGCTTCCCTCCAGTCCAAGACCGTGCTGACGGATGTCTTCCTCAAGAGTCAAGAGTGAAGCC
ATTGTCCACTAATAGTAATTCAGAATTTTTCATTGTCATATATCATTATGATAG--AAAGGATATGTTTTTCAATATCAC
TTGAATTTAGTCGTGATGGCATATTTTTCTTGTGCGGCTGCTGCCGTGATGAATCAAAGATTCTGCCAATG-TTGCTTTT
GGTGTCTCTCGGTTCATTGTTTCGATGAGTGGGTGTTAGAATTGACAGTTCAGTATAAACTTGAGCTAG--TTTCGGATC
AGCATACACAATCCCTATATCACTAATTAAA-------------------------------------------------
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>chr3A_1_TraesCS3A01G089500
ACGCTCCAATTGGACACCTCTCTCACCCTACGTCGCTTTTTTCGCTTGTCCAAAACCAGTTTCATGTTCTTATTAAAAGC
ATGCAATATGAAAATGGTGGTGAGTTTATTAATGGCTCCTTACG------------------------------------
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-------------------------------------------------------------TGACTTTTTGTCTACTCAT
GGCATCACTTATGGCTTCTCTTGTCCACATACCTCACCACAAAATGGGAGGGGCGAAAGCATGATTCACACCACAAATGA
TATCGCTCGTACTCTTCTTCTTCAAGCCAACCTAACACCTCCCCTTCGATGTTTTGAAAAACACACCTCCTTTTGGGTTA
AGGCCCTTCACACCGCCACACACCG--------------CTTCCGCCTCTATTCGTCACACGGCACCATACTTTCTTGTA
TATGGCCAG--CATCCACACTACGATCACCTA--CGTCTTTGGGTGTCTATACTTTCC-------TAACTTGTATGCCAC
ATCACCACATAAGCTCACTCATCCACATCCGA------------------------------------------------
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-----------------------------------CACAGATCCCACCCATCCACATCCGACACGCACGGCTTCCACCAG
TCTCCACCCGACACGACCGGATCCAATCCGCCTCGTGCTCATCTGCCTCGACACTATAGCAAGTTTAATTCACCGTGGAA
GCCAATTCACCTGTAGATGCAAGCAGTTTAATTCACCATGAAAGCAACGTATTTATCCATTGGAAACTATTTTTTTGTTA
AGGAAGCCAATCTTCTAAATAATAATGGAACAATATTTGCTTCCCAAGGAAGAGGACCGCCTGCTAACCATCGGAGCTAA
TCCCATGAAATATGGTAACAAATTACTGTAGAAGATGTGATTTACGCAAGCAGTTATGGAAAGAAAATCGCTGTTACTAG
TGTCTATCCAAACAAGCTGCATGCCTAGGCATCACCACGCGCGCACACAACACATCGGACGTCCATATTACTTCCAATCC
GATGGCGTATGACAGGTCTGATGGGTGCATATCATGGTAGTCTGACGCCTAGGATAAATTCGTGCGCGTGCTCATCTGCA
TCCGCACCATCTAAACCCTAGCTAGCCGCCGCCGCTCCCTGATCGACTGCTCTCTCCTCGACCTTCACCTTTGCACACCG
CCGCTGAGCGCCTGC--GCCGTGACTTAAAATGCCTCGCCGCCAGCGGGCGGCGATG---TCGTCGGAATCGGATGATGC
TAGTGCGCCGGAGTGGGGATCGGAGGATGAGGATGAC------------GATGACGAGATAGCTGCACAGGGGGCAGCCG
CAGCGACTTTGGCGGCGGGGTTACCGATCAAGCTCGTGATCGACACCAAGACTCAGAAGGTGCGGTTCGCCGAGGCCGGA
AGCGACGTCGTGGAGTTCCTCACCGGCCTCCTGTCCCTGCCGCTGGGCACCGTCGTCGACCTGCTGACCAAGGAGCGCAT
GGTCGGCAGCATCGGCAACGTCCCCGGCAGCGTGGAGAAGATGGACGCCGGCTACAAGGGCAAGGAGCGGCGCCTCAGCC
CGGCCGTCACCCCCGCCGCGCTCTCCCGCCTGCAGCAGCTGCTGAGCGCGCACCTCATCAACGGCCGAACCTGCTGCCAT
TGCACCAGTTCCACGTACAATGC---------TGCCGCCGCGGGAACATCCACGACGCCGTCGCTACCCACGGCCACGTA
CACTGTCGGGGACGACCTCTCGGTGACTCCGGCTTCTTTTTTCACGACCATGTCGCTTC--TGGGCATCGCGCAGTTCGC
ACAATTTGGTGGCG---AGGACCTCAGCACGCTGCAGGAGAAAACCGTGAAGATCGGCAAGGAAGAGGTATGTACGTGGC
GTCCTTCGGTTTCTGACTAGGACTTTTGAACTGCTGGTGATTGATTTTATTTTCCCCTGCATGCGTTGGAATTTTG--TA
GGCGCTGAGGATACTCGCTGCTTCCCTCCAGTCCAAGACCGTGCTGACGGATGTCTTCCTCAAGAGTCAAGAGTGAAGCC
ATTGTCCACTAATAGTAATTCAGAATTTTTCATTGTCATATATCATTATGATAG--AAAGGATATGTTTTTCAATATCAC
TTGAATTTAGTCGTGATGGCATATTTTTCTTGTGCGGCTGCTGCCGTGATGAATCAAAGATTCTGCCAATG-TTGCTTTT
GGTGTCTCTCGGTTCATTGTTTCGATGAGTGGGTGTTAGAATTGACAGTTCAGTATAAACTTGAGCTAG--TTTCGGATC
AGCATACACAATCCCTATATCACTAATTAAACAAACACATACTGTATAACATAATCAGCCAT------------------
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----------------------------------------------------GCAGCA--------CATAGTAGGACCTC
ACGAAATGG-TACTGGAGTCCCATCG------------------------------------------------------
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------------------------GTACTGATGGGGCAGTCAGTAGTGGCGGTTTTAATGTCGGTCTGAAGAAGACGTTC
ATCTTCTCCATTGGGGAGCCC-TTTCAGGCGACCAAAATAACCTGGGTGATGCATGAGTACCACTTACTTACGTGAAT--
GGGGGTATAGTAAGAGCACCTCAGGTAGTTCACACAAGTGGCCTCGCAAGAAGAAAGGCAACCCAGACAATGTGAGT---
----ACATGTTATTGTATCTAGCATTTTGTTAAACTATGCATT--TAGCATCATAATATATG-------CATGACAAACG
TG-CCAACATGCAT---------------GGATGCAGAAATTGGGTGGTAATGCCGGGTGTTTGAGCCAAGCTATGATTC
GCAAGTGATCTTCCACACAAGGATGACATGGAATTTTCATGCTTAGATGAGGTGTTCCTATCCCTAGATGACTATGATGA
ATTTAGTTTACCGAAGAATTAGAACCTTTGCTAGCATAGTTGATAGAATGAGTTTTGTGCGTATGATGCCATCTGATCAT
GGTGATACACATAAGAGAAGCTTCTTCCTTAATGATCAATTGGTATGGTAGGCATAAG-CCTAATTAGCTCCATCTAGAA
CAAAGATGTAATTATTCTCCTCAAAG-AGGTGTATAAAATATATTTAATATGTTTTGACTACTACAGAATATAAGTGTGT
AATAGCCTAATGGGCAGTCTTTCAACTAGCGCTTACTCAATCATTTGATGGGTTTTCC----TAGCAAAGGGCATGTCCT
GGATGATCATTGTATGAGGTCA-CAGTGAGCACTATAAAGAGGCTTGTGGGGGTTATGA---------------------
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------------------CTTAGCT-AGGACTGGTTTTGGAGAGATGCAAGCAATGCTTGTGCCTGCCAACTA------C
GACTCATTGTGTTTCTATGTGTTGTGAACAATGTTATTGTGCCCACAAATCAAAGGCCAAAATGAATCACTCAGAT
>chr3D_58
---------------------------------------------------------AGTTTCATGTTCTTATTAAAACC
ATGCAATATCAAAATAGTGGTGAGTTTATTAATGGCTCCTTACGGGACATGGAGTATATGCTCCCGAGCTCAAATGCTCC
CTCGTGAACAGTAAAATCAGAAAAAATAGTAAATAAATTTAAAAAATTCTGATTTTTTTATGGTAAACTTTGACAAATGT
TTTGCATGCTTACAAAATTTCAGCATGAAATAACATTCGTAGAAGTCGTGACAAAAAAAATTAAAATCGACATTCCAAAA
ATGCTAGTTTTGAACACATTTTGGAGTGCCGATTTTGTTTTTTTCGCCACGCCTTTCACGAATGTCATTTCGTGCTGAAA
TTTTGCAAGCGTAAAAAAATTTGTCAAAGTTTACCATAAAAAAATTTCAGACTTTTTTGAAATTTTTTACTATTTTTTTA
TTTTACTATTCATGCGGGTGCATTTGAGCTCGGGAGTAGAATAGTACTTTCGCTCCTTATGTGACTTTTTCTCTACCCAT
GGCATCGCTTATGGATTCTCTTGTCCACATACCTCACGACAAAACGAGAAGGGCATG----TGATTCACACCACAAATGA
TATCACTCGTACTCTTCTTCTTCAAGCCAACCTAACACCTCCCTTTCGATGTTTTAAAAAA-------------------
---------------------------TAAACCGACTCCCTTCTGCCTCTGTTCGTCACACGACACCATACTTTCTTCTA
TATAGCCAG--CATCCACCCTATGATCACCTATGCGTCTTTGGGTGCCCATATATACTCCCTAATTAACCTGTATGCCAC
ATCACTACATAAGCTCGCTCCTAGGTCCA----CGCGGTGTGTTTTTCTCGGGTACGCCCTAGAGCATAAAGGCTGGCTA
TAGCTGCTTTGATCTCCAGTCTCGCAAAGTCATCGTTTCCCGTCAGCGTCAGGTCATCTTTGACGAAAATTCCTTTCCTT
ACGTGCCATACACAACAGCGACTACAGATC--CACCGGCCGCACAAAATCCGCCCAACCCGATCCCCATCGGATCTCCCG
CCGAAACTACCTCGTACCAG----------GCCCGCACGGATCCCACCATCCAGTCTC---CACGCACGGCTTCCACCGG
TCTCCACCCGACACGCCCGGATCGAATCCA--------------------------------------------------
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-------------------------------------------------------------------------ATCCGCC
TCCACGCCTTCTAAACCCTAGGTATCGCACGCCGC----------------GGCTCCCCGCT------------------
------------------CCGTTTCTTGAAATGCCTCGCCGCCCGCGGGCGACGATCTACTCGACGGAATCGGATGATGC
GAGTGCGCCGGAGTCGGGATCGGAGGATGAGGATGACCTGGATGAC---GATGACGAGGTAGATGGACAGGGGGCACCCG
CAGCGACTTCGGCGGCGGGGTTATCGATCAAGCTCGTGATCGACACCAAGTCTCAGAAGGTGCGGTTCGCCGAGGCCGGA
AGCGACGTCGTGGAGTTCCTCACCGGCCTCCTGTCCCTGCCGCTGGGCACCGTCGTCGACCTGCTGACCAAGGAGCACAT
GGTCGGCAGCATCGGCAACGTCCTCGGCAGCGTGGAGAAGATGGACGCCGGCTACAAGGGCAAGGAGCGGCGCCTCAGCC
CGGCCG---------CCGCGCTCTCCCGCCTGCAGCTGCTGCTGAGCGCGCACCTCACCAACGGCAGAGCCTGCTGCCAT
TGCACCAGTTCGATGAACAATGCTACCACGGGTGCCGCCGCCGGAACATCCACGA------------------CCACGTA
CACTGTCGGGGACGACCTCTCGGTGAATCCGGCTTCTTTTTTCACGACCATGTCGCTACACTGGGCATCACGGAGTTCTC
ACAATTTGGCGTCAACAAGGATCTCAACGCGCTGCAGGAGAAAACCGTGAAGATCGGCAAGGAAGAGGTATGTACGTGGC
GTGCTTCGGTTTCTAGCTAGGAGTTTCGAACTGCTGGTGATTGATTTTATTTTTCTCTGCATGCGTTGGAATTTTGTATA
GGCGCTGAGGATACTCTCTGCTTCCCTCAAGTCCAAGACCGTGCTGACGGATGTCTTCCTCAAGAGTCAAGAGTGAAGCC
ATTGTCCAATAATAGTAATTAAGAATCATTATCG------TATCATCATGGTAGAAAAAGGACCTATTTTTCAATATCAC
TGGAATTTAGTCGTTATGGCATATTCTTCTTGTGCGGCTGCTGCTGTGATGAATCAAAGATTCTGCCAATGTTTGCTTTT
GGTGTCTCTCGGTTGATTGTTCCGATGAGTGGGTGTTAGAATTGACAGTTCAGTATAAACTTGAACTAG--TTTCGGATC
AGTATACAAAATCCCTATATCACTAATTAAACAAACACATACTGTA--ACATATAAGTAGTTCATTGGGGACGCAGGACG
CTTGTTAACATATACTAGTTCATTGACCTCTATCACAATGCGCGTGACAAAATTTGTACAGTGGCCGTGCTCACAAGACC
CATTATTGGGGACGTAGGACGCTTGTTTAGCCCCATTTGTGCTGGTAATTTCAGAACATATTGATGGCGCCCAATTGTGT
TGGACCTGACCTTTGCTTCACATATCACCCATTGCAGAAGTCGACAATTAAGCTGTCATGATTGGGCAAAGAAATACGGA
AATACAAGCAAGTCTGTTTTACAATGGATGGAGGGAGAAACAAAAGGGCGAGTCTACGTCTCTAGGATAGTCTTCAGACA
ACCAAAAAAAATGATCTAACAAATCAAACTCAAAACTTTTTTCTTAATTGTTCTAGCTAGTACAAGTTAGGGGTTATTTT
CCTAACTAGTCCACTTCAGGTAAACACTTTCATTGACATGAACCAATACGATTAATGTATTACTATACAAACTAATAAAT
CTGAAGAACGTGAAACATCTATATCCCTAGTATGTTTGGGTTGAGGAAGGTAATATGCACTTTGGCTACAAAATGCCCAA
GCATGCACAACAAATGGTCAAAAGCTAAATCAAATTGCCATTTGTTGGTCCAAACAAAATCAAGATACTATTCGGTGCAT
GATTGTTCAATATCTACATGATAAACAACACACATCAAATAAGAGAGGAAGTCATAACTTCGGTCTAATCAACACAATAA
TTTAATGGCAATACGAGGTTTCGCATTACTTACGCGTGCAACCTTAAAAAGCCAATTCTTGATTCAGTCATCTCACCTAG
TTTCCTCATTCACTTCTCTTGATCTCAGATATGGATGGGCATATATCACAATGGAACTCCAATCACATATTATGCTATAT
TGACAATTCTCTTGGGCAAACATGGTATTTTGAAGTTTACCTAAAGTAGCACACAAACATAAGCTGAACCTCCATTGGAG
AAGAAAGGATAAAACCGAGAGATTTAAGGAAGAAGCTTGTCATCAAGCAAAGGGATCCCACCCCCAAGGTTGTGAAGATC
AGATCCACCATCTTGTCTCCTTCAAGTTGTGGTTCCACCATCCATCTTATTTGAGATAGTTTCAATCCCTAGCTCTTGCA
TCTCCAAGTCTTGTTGTTGCTATCAAAGATGAAGAAATCTTGATGTATGAGATTCGCTAGTGCTATCTCACTAGTAGAAA
ATCGACTTTTAGTACCGGTTCGTAAGGACCTTTAGTACCGGTTCTGGAACCGGCACTA--------AAGAGTGGGGACTA
AAGGTCCCCCCCTTTAGTCCCGGTTCAACACGAACCGGGACCAAAGGCCCACCACGTGACAGGAGGCGCGCCGTGGTCTG
CGGGACCTTTAATCCCGGTTGGTAAGGATTTTTTTTATTTTTATTTTTGAAATAAAGCAAAAACAGCCCACCTACTGGGC
CGGCACGGGCATACGACTAGAAACCCAATCTCTAGTTGGGCCAGGATGCAGGCCCGTACGACCCAGTAGGCCCCACATGG
CAGAAGACTTGCAATAGGCCCACAAAGGCCTGCTTAGAGAGGAGCTCGACACGGTAGCCGCGACGGGGCTTATAAACCGG
TGCGAGCTCCTCTCAACTAGCGAGGTGGGACTAAACATTGTGCACTGCGGGTGGCAGCGCACCACCTTTAGTACCGGTTG
GTGGCTCCAACCGGTACTAAAGGGGGGGGGTCTTTAGTACCGGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACCCCCCCCCCCTTTAGTACCGGTT
GGAGCCACCAACCCATACTAAAGGCCACCACCTCTTTAGTACCGGTTCATGGCACGAACCGGTACTAAAGGTTCGCCACG
AACCGGTACTAATGAGCGCCGCCCGCCTGGCCGTTGGAACCGGCACTAATGGTCACATTAGTGCCGGTTCAATTACAAAC
CGGGACTAATGAGTTTCACATTAGACCCTTTTCTACTAGTGCCTAGAGAACTTGTTATATCTCACATTTGATAATAGTGA
TAGAAGATTTGGGTTGCTCGGACCATGGTTTTTACCCCAACTTGGGGGGTTTTCACGTAAAAATATAGTGTCTATGTGTG
TTGATGTTCTATTGTTGTTCAAAGAGTTTCTCATGGCGCATCTAGCATGTTGTGAAACCTATTTCCTCCATATATGCTAC
TACATATGTTTCCTTCCATGTTGAGCAATGATCCTTGAATTATTACATGAAGTGGAGCTAAGATTACTTTGTTTCGACTG
CAATTTTTAAACCATAAGTGTATGCTAATTCCCAACATGAGCATCATGTCATCAATGGCGAGTCCTCATTATGACAACCC
TTTCAAGGCAAAGCACTTCAAGCAGTGCTAACGGGGCAGCAAGTAGTGGCAGTTCTAATGTCGGTCTGAAGAAGACAATC
GTATTCTCCATTGGGGAGCCCCTTTCAGGCGACCAAAATCGACTGGGTGATGCATGAGTACCACTTACTTGACGTGAATG
GGG------GTAAGATCAGTTCATGTAGTTCACACAAGTGGCCTCACAAGAAGAAAGGCCACCTAGACAAACTGAGTTTT
GCATACATGTTATTGTATCTAACATTTTGTTAAACTATGCATT--TAGCATTATCATATATGATATGTGCATTACAAATG
TGTCCAACATGCATGGATCATCATTGCAGTAATGCAGAAATTGGGTGGTAATGTCGGGTGTTTGGGTCAAGCTATGATTC
GCAAGGTGAGCTTC-CACAAGGATGACATGGATTTTTCATGCTTAGATGAGGTGTTCCTATCC-----------------
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>chr3B_218
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--------------------------------------------------------------------------AAATGA
TATCGCTCGTACTCTTCTTCTTCAAGCCAACCTAACACCTCCCTTTCGATGTTTTAAAAAACAC--CTCCTTTTGGGTTG
GGGCCCGTCACACCGCCACACACCTACTAAACCCACGCCCTTCTGCCTCCATTCGTCACACAACATCATACTTTCTTCTA
TATGGCCAGAGCATCCTTCCTATGATCACCTACGCGTCTATGGGTGTCTATACTTCCC-------TAACTTGTATGCCAT
ATCGCCACATAAGCTCGCTCCTAGGTTCACGCGCGCGGTGTGTTTTTCTCGGGTG-------------------------
----TGCTTTTACCTCCACTCTCGCAAAGTCATCGTTTCCTGTCAC------GTCATCTTGGACGAAAATTCCTTTCCTT
ACTTGCCATACACCCCAGCGACTACAGATCTGCACCGGCCGCACAAAATCCGCCCAACCCGATCCCCCTCGGATCTCCCG
CCGAAACAACCTCGTACCAGGTCACCCCACGCCCGCACGGATCCCACCCATCCACATCCGACACCC-CGGCTTCCACCAG
TCTCCACCCGATACGCCTGGATCCAATCCGCC------------------------------------------------
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---------TCTAAACCCTAGCTAGCGCACGCCGC----------------CGCTCCCCCGGCCTGCACCTTGCACGCCG
CCTCTGCATGCGCACCTGCCGTGACTT---ATGACTCGCCGCAAGCGGTCAGCGATGTCGTACTTGGAGGA---------
---TGCGACGGACTCGAGATCGGAGGATGAGACGGACTCTGGATCGGAGGATGACGAGATAGCTCAACAGGGGGCAGCCG
CAGCGACTTTGGCGGCGGGGTTATCGATCAAGCTCGTGATCGACACCAAGTCTCAGAAGGTGCGGTTCGCCGAGGCCGGA
ACCGACGTCGTGGAGTTCCTCACCGGCCTCCTCTCCCTGCCGCTGGGCACCGTCGTCGACCTGCTGACCAAGGAGCACAT
GGTCGGCAGCATCGGCAACGTCCTCGGCAGCGTGGAGAAGATGGACGCCGGCTACAAGGGCAAGGAGCGGCGCCTGAGCC
CGGCCGTCGGCCCCGCTGCGCTCTCCCGCCTGCAGCAGCTGCTGAGCAGGCACCTCAACAACGGCCGAAC---CTGCCAT
TGCACCAGTTCGATGAACAATGCCATCACGCGAGCAGCCGCGGGAACATCCACGACGGCGTCGCTACCCACGGCCACGTA
CACGGTCGGGGACGACCTCTCGGTGACTCCGGCTTCTTTTTTCTCGACCATGTCGCTAC--TGGGCATCAGGCAGTTCGC
ACAATTTGGCGGCG---AGGACCTCAGCGGGCTGCAGGAGAAAACCGTGAAGATCGGCAAGGAAGAGGTACGCACGTGTT
GTGCTTCGGTTTTTAACTAGGAGTTTTGAACTGCTGGTGATTGATTTTATTTTTCTCTGCATGCGTTGGAATAATG--TA
GGCGCTGAGGATACTGGCTGCTTCCCTCAAGTCCAAGACCGTGCTGACCGATGTCTTCCTCAAGAGTCAGGAGTGAAGCC
ATTGTCCACTAATAGTAATTCAGAATTTCATTATCATATATATCATTATGATAG--AAAGGATATATTTTTCAATATCAC
TTGAATTTAGTTGCGATGGCATATTTTTCTTGTGCGGCTGCTGCCGTGATGAATCAAAGATTTTGCCAATGTT-GCTTTT
GTTGTTCCTCGGTTGATTGTCTCGATGAGTGGGTTTTAGAATTGACAGTTCAGTATAAACTTGAACTAGAGTTTCGGATC
AGCATACACAATCCCTACATCACTAATTAAACAAACACATACTGTA--ACATAATCAGCCAT------------------
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----------------------------------------------------GCAACACATAGTAGCAGTGTAGGACCTC
ATGAAATGG-TACTGGAGTCCCATCG------------------------------------------------------
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------------------------GTACTGATGGGGCAGTAAGTACTGGCGGTTCTAATGTCGGTCTGAAGAAATA----
ATCTTCTCCATTGGGGAGCCC-TTTCAGGCAACCAAAATAACCTGGGTGATGCATGATTACCACTTACTTGACGTGAATG
GGGGGTATAGTAAGAGCACTTCAGGTAGTTCACACAAGTGGCATCGCAAGAAGAAAGGCAACCCAGACAATCTGGGTGCT
GCATCCATGTTATTGTATCAAGCATTTTGTTAAACTATGCATT--TAGCATCATCATATGTG-------CATGACAAACG
TG-CCAACATGCATGGATGATCATTGCAGGGATGCAGAAGTTGGGTGGTAATGCCGGGTGTTTGAGTCAAGCTATGATTC
GCAAGTGACCTTCCACA--AGGATAACATGGAGTTTTCATGCTTAGATGAGGTGTTCCTATCCCTAGATGACTATGATGA
ATTTAGTTTACAGAAGAATTAGAACCTTTGCTAGCATAGTTGATAGAATGAGTTTTGTGCCTATGATGCCATCTGATCAT
GGTGATACACATAAGAGAAGCTTCTTTCTTAATGATCAATTGGTACGGTAGGCATAAG-CTTAATTAGCTCCATCTAGAC
CAAAGATGTAATTATTCTCCTC----AAGGTGTATAAAATATATTTAATATGTTTTGACTACTACAGAATATAAGTGTGT
AATGGCCTAATGGGCAGTCTTTCAACTAGCGCTTACTCAAGCATTTGATGGGTTTACCTAAATAGCAAAGGGCATGTCCT
GGATGGTCATTGTATGAGGTCA-CAGTGAGCACTATAAAGAGGCTTGTGGGGGTTATGAATTAGAGCATCTCCAGCCGTT
GGCCCCCCAGGAGGCGCTAAAAATCGCCCCCTGGGGGCGCACCGGCGCTAAACCGCGCGCTGGGGGCGTGATGCCCCCCA
GTCGCGGCGCCCACGTTTTTTTGAAAATTTTAATTACGGCACAAACACGGTGCAAATTCAACCAAACTTCCGCGAGTTCG
TTCATATTTAAACATATTTTACAAAAAAGGAAAAAAAACTACTAGGCTGCTCCTCGCCGTCTCCCTCGCCGCTCCTCGCC
GTCCGCCGCCCCTTGCGGTTCTACATGCCGAGGAGGCTGTAGAACCGCGTGTAGTCGCCGTCGTCGTCATCGTCGTCGTC
GTCGCCTCCTCCGCCGCGGCCGTCGTCCCTGCTGCAACCCTCCCCCGGTTGGCGCGGTGGGTTGGACGGTCCGGGGGCAT
CCTCGTCGTCGTCGCTGACGAGGATCACGACGCCGTGCTCGTCCTCGCGCCCACGTTTGCGGGCGTCTATCTCCTCCAGG
GCCCGGTGCTGCCGGACCATCTCGTCGCGGAGGTAGTCGTCCCACGCCCACTGTAGGGCCTCCTCGTTAGAGAAGCCACA
CCGGGCTATCTCCTCGTACTCCGCGGGGAGGTCGGGCTCCGGCTTTAGCGCGACGAGGACGAAGTGGCCAGAGGGGGGTG
GAGTCGCCGATGCGGACGCTGGAGCTGCGTCTGCGCCCGCTGACAGGCGTGTCCTGGGGTTCCGGCTTAACGGAGCGGAG
GCAGGGAGAGCCGGACGAGCGGCCGGACGAGGAGGAGGACGCCCCGTGCTGCTCCATGCGCCTCGGCGTCCACGAGCTCC
CACGTCAGCGAGAGAAGGACGGGGGAGCGAGGTACTCGAGCCTCGGCGTGTTGCCGCCCTCGATGTACTCGAGGACGGCC
TCAGCGTGCGGCCTGGCACGCCCCACCATCGGCGCCGCCCCTCGGAGTTGAGCCTTCCGGAGGGCACGGCGCCGTTCATG
GCCTCGAGCTGTTCGGCGTGGCGGCGGCGGAAGTATGGCTCCCAGAGCGGGCTGTCGGGGACGTACCGCGGTCCTTCCCT
CGCCGCGTGCGGCAGGGGGGCGTGGATACGTGCGATCTCCGCACGCCGCGCCGCCCCGGTGGGTGGTGGTGGCACCGGGA
CACCGCCGGCGCTGGTTCTCCATGCCCCGGGCACCCGCATGTACGGCGGGACCGGGTACTCGGCCTCGAAGAGGAGCCGA
GCTTCGTCCTCGTGAAGATGGCGGCGGCCGAAGCCGTTCGCCGCCGTGCCGTCGCCTGGGAAGCGCTCGGCCATGCTTTG
AACTGGAGAAGGCGAGAGAAGAGGGAGGAAGGGGGAGAAATGGCGCATTTGCGGTGGAGGCTTTGTATGTGTCTCGGGCG
CGCTGGGGGTCGGCTTATATAGACGGAGAGGCGCCGCATACGCGTGGCGGGCGAGGGGACGCACGTCGTCTAGTCTTCAC
TGCGCCGCCCGTGAGGCATCAATGGAGGCTGACCGGCGCGGCAGCGCGCGACAGGTTTGGCATTGATTCGCCACGGGAAA
CGAGGCAATGAGGACGACGAAGCGGCGTGAAGAGCGATGAGTCGCTGGCAAGGAGGGTCCACGGCTCTTTCGCGCCAAAA
ACGATTCGCCCGGTGCCCCCGAGCGCCCCCCAGCGCGCTGGGTTCGGGTTGGGTCCGCCGACGCCAATTTCGGCCTGAGC
CGGCGAAAACTGGGCCCTTGGGGGCGCGATTGGGCCGATTTTTTGGCGCCGGCGGCCGAAAAGTCGCCTGGGGGGCCGGG
GGCGCGGCTGAAGATGCTCTTAGCT-AGGACTAGTTTCCGAGAGATGCAAGCAATGCTTGTGCCTGCCAACTA------C
AACTCATTGCGTTTCTATGTGTTGTGAACAATGTTATTGTGCCCACAAATCAAAGGCCAAAATGAGTCAGTCAGAT
>chr2D_2214
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--------------------------------------------------------AGCCAA------------------
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----------------------------------------------------GCAACA--------CAGAGTAGGACCTC
ACGAAATGGGTGCTGGAATCCCATCG------------------------------------------------------
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------------------------GTGCCGATGAGGCAGTAAGTAGTGGCGGTTCTCATGTCGGCCTGAAGAAGACACTC
GTCTTCTCCATTGGGGAGCCC-TTTCAGGCGACCAAAACCAACTGGGTTATGCATGAGTACCACTTACTTGACGGGAATG
GGG------GTACCAGCAGTTCAGGTAGTTCACGCAAGCGGTCTCACAAGAAGAAAGACCACCCAGACAAAGTGAGTGCT
GCATACATGTTATCGCATCTAACATTTTCTTATACTCTGCATT--TAGCAGTATCATATACG-------CATGACAAACG
TGTCCAACATGCATGGATGATCATCGCAGGAATGCAGCAATTGGGTGGTG-TGTCGGGTGTTCGAGTCGAGCTACGATTC
GCAAGTGAGCTTCCACG--AGGAGGACATGGAGCTTTCATGCTTAGACGAGGTGTTCCTATCCCTAGATGACTATGATGA
AGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACATTTGAGAGAATGGGTTTTGTGCCTACCATGCCATCTGATCAT
GATGATACTCATAAGAGAAACATCTTTCTTAATGATCAAATGATCTGGTCGGTATTAAACCTAATTCACTCCATCTAGAC
CAGAGATGTAATTATTCTCCTCCAAGAAGGTGCATGAAACAAATTTAATATGTTTTGACTACTATGGAATATAAGTGTGT
AATGGCCTAATGACCACTCTTTCAACTAGCAATTACTCAAGCATTTGATGGTTTCTCCTAAATAGCAAAGGGCATGTCCT
GAATGATCATTGTATGAAGTCAACAGTGAGCGCCATGAAGTGGCTTGTGGGGGGTAGGA---------------------
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-----------------------CTTAGGAGTAGTTTTGGAGCGATGCAGGCAATGCTTGTGCATGCCGACTTCTCCTCC
AACTCATTGTGTTTCTATGTGTTGTGAACAATGTTATTGTGCCCACAAAGCAAAGGCCAAATGGAGTCAGTCAGAT
>chr2B_2214
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--------------------------------------------------------AGCCAA------------------
--------------------------------------------------------------------------------
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----------------------------------------------------GCAACA--------CAGAGTAGGACCTC
ACGAAATGGGTGCTGGAATCCCATCG------------------------------------------------------
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------------------------GTGCCGATGAGGCAGTAAGTAGTGGCGGTTCTCATGTCGGCCTGAAGAAGACACTC
GTCTTCTCCATTGGGGAGCCC-TTTCAGGCGACCAAAACCAACTGGGTTATGCATGAGTACCACTTACTTGACGGGAATG
GGG------GTACCAGCAGTTCAGGTAGTTCACGCAAGCGGTCTCACAAGAAGAAAGACCACCCAGACAAAGTGAGTGCT
GCATACATGTTATCGCATCTGACATTTTCT--TACTCTGCATT--TAGCAGTATCATATACG-------CATGACAAACG
TGTCCAACATGCATGGATGATCATCGCAGGAATGCAGCAATTGGGTGGTG-TGTCGGGTGTTCGAGTCGAGCTACGATTC
GCAAGTGAGCTTCCACG--AGGAGGACATGGAGCTTTCATGCTTAGACGAGGTGTTCCTATCCCTAGATGACTATGATGA
AGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACAGTTGAGAGAATGGGTTTTGTGCCTACCATGCCATCTGATCAT
GATGATACTCATAAGAGAAACATCTTTCTTAATGATCAAATGATCTGGTAGGTATTAAACCTAATTCACTCCATCTAGAC
CAGAGATGTAATTATTCTCCTCCCAGAAGGTGCATGAAACAAATTTAATATGTTTTGACTACTATGGAATATAAGTGTGT
AATGGCCTAATGGCCACTCTTTCAGCTAGCAATTACTCAAGCATTTGATGGTTTCTCCTAAATAGCAAAGGGCATGTCCT
GAATGATCATTGTATGAAGTCAACAGTGAGCGCCATGAAGTGGCTTGTGGGGGTTAGGA---------------------
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-----------------------CT-AGGACTAGTTTTGGAGCGATGCAGGCAATGCTTGTGCATGCCGACTTCTCCTCC
AACTCATTGTGTTTCTATGTGTTGTGAACAATGTTATTGTGCCCACAAAGCAAAGGCCAAATGGAGTCAGTCAGAT
>chr2A_2214
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--------------------------------------------------------AGCCAA------------------
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----------------------------------------------------GCAACA--------CAGAGTAGGGCCTC
ACGAAATGGGTGCTGGAATCCCGTCG------------------------------------------------------
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------------------------GTGCCGATGAGGCAGTAAGTAGTGGCGGCTCTCATGTCGGCCTGAAGAAGACACTC
GTCTTCTCCATTGGGGAGCCC-TTTCAGGCGACCAAAACCAACTGGGTTATGCATGAGTACCACTTACTTGACGGGAATG
TGG------GTGCCAGCACTTCAGGTAGTTCACGCAAGCGGTCTCACAAGAAGAAAGGCCAACCAGACAAAGTGAGTGCT
GCATACATGTTATTGCACCTAACATTTTCTTAAACTCTGCATTTATAGCATTATCATATACG-------CATGACAAACA
TGTCCAACATGCATGGATGATCATCACAGGAATGCAGCAATTGGGTGGTG-TGTCGGGTGTTCGAGTCGAGCTACGATTC
GCAAGTGACCTTCCACG--AGGAGGACATGGAGCTTTCATGCTTAGACGAGGTGTTCCTATCCCTGGATGACTATGATGA
AGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACAGTTGAGAGAATGGGTTTTGTGCCTACCATGCCATCTGATCAT
GATGATACTCATAAGAGAAACATCTTTCTTAATGATCAAATGATCTGGTAGGTATTAAACCTAATTCACTCCATCTAGAC
CAGAGATGTAATTATTCTCCTCCAAGAAGGTGTGTGAAACAAATTTAATATGTTTTGACTACTATGGAATATAAGTGTGT
AATGGCCTAATGGCCACTCTTTCAACTAGCAATTAATCAAGCATTTGATGGTTTCTCCTAAATAGCAAAGGGCATGTCCT
GAATGATCATTGTATGAAGTCAACAGTGAGCGCCATGAGGTGGCTTGTGGGGGTTAGGA---------------------
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-----------------------CTTGGGACTAGTTTTGGAGCGATGCAGGCAATGCTTGTGCATGCCGACTTCTCCTCC
AACTCATTGTGTTCCTATGTGTTGTGAACAATGTTATTGTGCCCACAAAGCAAAGGCCAAATGGAGTCAGTCAGAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S-
---------S-----S----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------S-----S---
------S-------S----------------------S------S-S--S----SSSSSSS-------------------
-------------------------------------------S-----------S--------SS-------------S
S-----S-----------------S------------------S------------------S--------------S--
------------------S---S--------------------------------S------------------------
----------------S---S-SSSSSSS--S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
---------------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S
---S-S--S-----------------SSS------SSSSSSSSSSSSSSSS-S----S--SS-S-SSS-S------S---
--S---SSS--SSS-------------S----------------------------------------------------
S-------------S--------------------------------------------------S--------------
-----------------------S--------------------------S-----------------------------
----------------------------------------------------------------------------S---
-----------------------S--------------------------------------------------------
--------SS-----------------------------------------------S----------------------
-----------S-S-S-----------------------------------------S----------------------
---------------------------------------------------------S-----------S----------
---------S------------------S---------------------------------------------------
--S-----------S-------S------------------------------S-S------------------------
----------------------------S---------------------------------------------------
------------------------------SSS-SSS----------------------------S--------------
--------------------------------------------------------------------------------
--------------S-------------------------------------------------S---------------
----------------------------------------------SS--------------------------------
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-------------------------------------------------------S------------S-----------
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----------------------------------------S-------------S---------------------SS--
----------------------------------------------------------------------SSSS-S-S--
-------------------S------------------------------------------------------------
------------------------------------------------------S-------------------------
------------------------------------------------------------------S-------------
--------S-----------------------S-----------------------------------------------
------------------------------------------------------------S-------------------
--------------------------S----------------------------------------------------S
----------------------S---------------------------------------------------------
---S------------------------------------S---------------------------------------
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--------------------------------S-----------------------------------------------
S----------------------------------------------------------------S---S------
>forward_1672
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----------------------------------------------------GATAAATTCGTGCGCGTGCT--------
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>reverse_2589
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----------------------------CAGTCCAAGACCGTGCTGAC--------------------------------
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>forward_1673
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-----------------------------------------------------ATAAATTCGTGCGCGTGCTC-------
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>reverse_4216
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-------------------------------------------------------GCACATAGTAGGACCTCACGA----
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----------------------------------------------------------------------------
