>input_sequence_58045
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-------------------ATGGGGCGCAACTTGGCGGCG---GTGCTCGTCGTGCTTGCCTGCCTCGTTTCCCTCGCGT
CGGCGCAGCAGGTCAAGACGACGGACACGCGGTGGAGCTACCGTCTGCCGCTGCCCGACGGCGTCAGCGGCGCCGAGAGC
CTCGCGTTCGCCGGCAAGGACGGGGTCTACACCGGCGTCTCCGACGGGCGCGTTCTCAGGTGGGGCGGGAGCGCCGCCGG
CTGGACCACATTCGCTTACAATGCCAACTACAGGTCAGT----GTAATTAAAA-GCTCAAAATCGTGTTTTTTTTCTTAG
-----------GATCGACCGCGATCTAAAATTTAGGTTACGTGTGGCATGTGGGACGTGTGTAGGAAAATTCCTCTGTGC
TCGGATTCTGGGGTGCCGTCGGAACAAAAGGAGAGCATATGCGGGCGGCCGCTGGGTGTCCGGTTCAACAGGAAGACCGG
CGAGCTCTACATCGCCGACGCCTACTTGGGGCTCATGAAGGTCGGCCCGGAAGGCGGCGAAGCCCAGGTGCTAGCGACGG
AGGCGAACGGCATCCCCTTCCACTTCCTCAACGGCCTCGACGTTGATCAGGCGACCGGCGATGTCTACTTCACCGACAGC
AGCGCCAACTACCCCCGGAGGTACCG------------CACACGCCAGATCACGCCTTAAAAATC------GTTTGTAGC
ATGAACCCCGGAGATGACGAACCAATGTTTATGTGCGTGCAGGTTCAACACGGAGATCATCATGAACGCCGACGCGACCG
GCCGCCTGCTCAAGTACGACGCGCGCACGGAGCTCGTCACGGTGCTCAAGGCGGAGCTGCCGTACCCGAACGGCGTCGCG
CTCAGCCGCGACAGGACGCACCTGGTGGTGGCGCACACGGTGCCGTGCCAGGCGTTCCGGTACTGGCTCAAGGGGCCCAA
GGCCGGGCAGTACGAGCTCTTCGCCGACCTGCCGGGGTACCCGGACAACGTGAGGCGCGACGGGCAGGGCGGTTTCTGGG
TGGCGCTCAACCAGGAGAAGGCGCGGCTCAACGCGA---CGGCGGCTCCGGTGAAGCACTTGGTCGGCGTCCGTCTCGGC
GCCGACGGCGTGGAGGTCGAGGAGCTGACGGCCGCCAGGGGCGTGACGCTCAGCGAGGTGGCGGAGCAGAACGGCAACAA
GCTGTGGCTGGGCTCCGTCGAGCTTGATTATATAGGCCTCTTCGTTTGA-------------------------------
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>chr3A_1_TraesCS3A01G256600
AATATCAATGGATGATGACTTCCCAGTTACTGTCCGAATAAAAATTCCTCTTTCCAACTTAACGATTGCTCATGCGTTAA
GCGCATACTCACACTACATGACGGCTAAAA-TTTCGCGAAGTGCTGAAAGCTACCATGG---------------------
--ACCGAAGGACCTCCTTTCACTAAATCCCCTTCACCTACCCCGTCCGAAGACCCAATCCCCAAAACCACGACGCAATCA
GCCGTGGCAAGCAAGCGATCTCGGGACTCCAGGGACTAATCGAAGCCCGGAGGGGTCGGGTCCTACTCCCGCCCCCCATG
CTCGAGCTCCAGGAAATGGGTTC-------------TCAGCTACAGCTAGCGTTTCTGGCTCGGGTAAGCGGACCCGCTA
AGACGGAGGAGGCGGAGGTGTAGAGAGCGTAGGGCGGGAGACTGACCTCGTCGGCGGCGGCCGGCGGCGAGCGGCGGTGA
TGGGTCGCGGGGAGGGGACCCGCAACCCGATCCGGTGGGGGCTTAGCAGATCGGAGCCGGGGCCGACGAGGCGTGGGTTG
CGAGCCGCGACCCATTTCGCGAGTGCAGGGTGGTGGTTTTGTCGCCGTGGTGGGTTTCGGGTCCGCCCCTGCGCGATGGA
CGGCCCCGATGCGGCCGCGACAGCCAGCTCCTCGGTCGGGCGTGGCTGGCCCGGACCCCAGACTACTTGGGTTAGTGGTA
GCCAAGGTTGGAGTGGGTGTGGGTGGACCGAGGCGAACAATACCTGAACCGGTCGGGTTCGGGTCGAACTCAGCAGAGAC
CACAAACGAAACGGGCTCGGTCGGACGTACGGGGGCAGCCCGTCACGTCACGTCACGGTTTTACTTACAGTTCGTCACGG
TTTTACTTACAGTTCGTGTGGGATTTTACGTGGAGTTGGTGTAGGATTACTACCGTGTCTCTGGTCTGATCTGATCCATG
GGTCGTGGC-------CTCCCATAAAAGGCATGGAGGTGAGCGCTACGACTTCCCATAGAGGAAAACTTTCGAGGACTAT
---------GAC------GATGGGGCGCAACTTGGCGGCG---GTGCTCGTCGTGCTTGCCTGCCTCGTTTCCCTCGCGT
CGGCGCAGCAGGTCAAGACGACGGACACGCGGTGGAGCTACCGTCTGCCGCTGCCCGACGGCGTCAGCGGCGCCGAGAGC
CTCGCGTTCGCCGGCAAGGACGGGGTCTACACCGGCGTCTCCGACGGGCGCGTTCTCAGGTGGGGCGGGAGCGCCGCCGG
CTGGACCACATTCGCTTACAATGCCAACTACAGGTCAGT----GTAATTAAAA-GCTCAAAATCGTGTTTTTTTTCTTAG
-----------GATCGACCGCGATCTAAAATTTAGGTTACGTGTGGCATGTGGGACGTGTGTAGGAAAATTCCTCTGTGC
TCGGATTCTGGGGTGCCGTCGGAACAAAAGGAGAGCATATGCGGGCGGCCGCTGGGTGTCCGGTTCAACAGGAAGACCGG
CGAGCTCTACATCGCCGACGCCTACTTGGGGCTCATGAAGGTCGGCCCGGAAGGCGGCGAAGCCCAGGTGCTAGCGACGG
AGGCGAACGGCATCCCCTTCCACTTCCTCAACGGCCTCGACGTTGATCAGGCGACCGGCGATGTCTACTTCACCGACAGC
AGCGCCAACTACCCCCGGAGGTACCG------------CACACGCCAGATCACGCCTTAAAAATC------GTTTGTAGC
ATGAACCCCGGAGATGACGAACCAATGTTTATGTGCGTGCAGGTTCAACACGGAGATCATCATGAACGCCGACGCGACCG
GCCGCCTGCTCAAGTACGACGCGCGCACGGAGCTCGTCACGGTGCTCAAGGCGGAGCTGCCGTACCCGAACGGCGTCGCG
CTCAGCCGCGACAGGACGCACCTGGTGGTGGCGCACACGGTGCCGTGCCAGGCGTTCCGGTACTGGCTCAAGGGGCCCAA
GGCCGGGCAGTACGAGCTCTTCGCCGACCTGCCGGGGTACCCGGACAACGTGAGGCGCGACGGGCAGGGCGGTTTCTGGG
TGGCGCTCAACCAGGAGAAGGCGCGGCTCAACGCGA---CGGCGGCTCCGGTGAAGCACTTGGTCGGCGTCCGTCTCGGC
GCCGACGGCGTGGAGGTCGAGGAGCTGACGGCCGCCAGGGGCGTGACGCTCAGCGAGGTGGCGGAGCAGAACGGCAACAA
GCTGTGGCTGGGCTCCGTCGAGCTTGATTATATAGGCCTCTTCGTTTGATCGATTATGTGCCA-GCGCCTTTAT---GGA
TTTGTACGG------GTTCGTTAGTGGTTG--------------------TCTCATTGAGTTAGTAG-------------
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----------------------------------ACAGAGTTAAAGGTCATGGCTTCGTACGGTTTCAGGACTACATGCA
ACGTTTTTCTACAGATGTAATTATGCGAGTATTAG--TTATCCTTCTGTCAAATCCATTTGATTTGCTTAAGA-------
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----------------------------------------TTTTTCTTTCTGAACTTCGACTATTGTTACGTACTTAAT-
---ATAATACCATTAATTAGGAAAACATGAAAGGATGATTAAAAAAGTCATCCATAATTCTTTGTACACGGAAAAGGACA
ACAAAAGATGTTGTTCGATACTGGAGGGCCAGTTCTCTCTTCTCCCATCCAGAAAAGTTGGCTTACCGGAAACAGCCTCT
TGTTTCTGATGTCCTTCTTTGGACT-GACAACTACAGTTTCTGTATGGTTTAGTGAGATGATGCATCAACCGTGAAAAGG
CTCTCATATATAAAACGCGGGGATATGATGTAAAGGCTGCAATG---CTGACCCGTAAATCGGACACAACATCCATCCGC
GGACAGAAAGACTAGTCTGCGGCCATAAATGCGGAAGGCGGACATCTTCAATATTTTTTTC----TTTTTTCTTACCGAG
TATGCCATCTTCAATGCTAAGGGATTGCATGTATGTTTGATTGAGCTCAGAAAACATAGGAATATTCACACAAGATTGGA
GTGGATGAAAATTTTCTTACGAAATCCAGTACAAATGAATCCCAAG-AAAAAAATCCTATGTACAGGATTTCAATCAAAT
GAAAATTTTCTTTACAAATTCTTTTAATCAAAGCGGCCATATTTCTTTAAGCAACTAGATGATGCCCCGCGAGTTGCTGC
GGGAATCAATTGCAATATATTTCAATGAAT---------GCATAATATCAATATTTAGATTAATAAAATGTGAATCAAAA
TTAGAAATTCATTAGATTTATTATATTTGATTATGCATAATTGTATGTGGTGGTGAGTCTTTTTACATACATGGTTG
>chr3B_1
AATATCAATGGATGATGACTTCCCAGTTACTGTCCGAATAAAAATTC--CTTTCGAACTTAAAGATTGCTCATGTGTTAA
GCGCATACTCGCACTACATGACCGCTAAAATTTTCGCGGAGTGCTGAAAGCTACCATGGCACAT-GTATATGCAATATAC
GGACTGAACGAACTCCCTTCACTAAATCCCCTTCACCTACCCCGTCCGAAGACCCAATCCCCAAAACCACGACACAATCA
GCCATGGCAAGCAAGCCATCTCGGGAATCCAGGGACTAATCGAAGCCCAGAGGGGTCGGGTCCTACTCCCG-CCCCCATG
CTCGAGCTCCACGAAATGGGCTCCCAGGCCGGGGCTTCAGCTACAGCTAGCGATTCTGGCTCGGGTAAGTGGACCCGCTA
AGACGGAGGAGGCGGAGAGGTAGGGGGCGTAGGGCGGGAGACTGACCTCGTCGGCGGCGGCCGGCGGCGAGCGGCGGTGA
TGGGTCGCGGGGAGGGGACCCGCAACCCGATCCGGTGGGGGCTTAGCAGATCGGAGCCGGGGCGGACGAGGCGTGGGTTG
CGAGCCGCGACCCATTTCGCGTGTGCAGGGTGGTGGTTTTGTCGCCGTGGTGGGTTTCGGGTCCGCGCCTGCGCGATGGA
CGGCCCTGATGCGGCCGCGACAGCCAGCTTCTCGGTCGGGCGTGGCTGGCCCGGACCCCAGACTACTTGGGTTAGTGGTA
GCCA-GGTTGGAGTGGGTGTGGGTGGACCGAGGCGAACAATACCTGAACCGCGCGGGTTCGGGCCGAACTCGGCAGAGAC
CACAAACGAAACGGGCTCGGTCGGACGTACGCGGGCAGTCCGTCACGTCACGGT--------------------------
TTTTGCTTACAGTTCGTGTGGGATTTTACGTAGAGTTGGTGTAGGATTACTGCCGTGTCT-------GATCTGATCCATT
-GTCGCGGC-------CTCCCATAAAAGGCATGGAGGTGCGCGCTACGACTTCCCATAGAGGAAAACTTCCGAGGACGAT
GACGACGGCGAC------GATGGGGCGCAACTTGGCGGCG---GTACTCGTCGTGCTTGCCTGCCTCGTTTCCCTCGCAT
CGGCCCAGCAGGTCAAGACGACGGACACGCGCTGGAGCTACCGTCTTCCGCTTCCCGACGGCGTCAGCGGCGCCGAGAGC
CTCGCGTTCGCCGGCAAGGACGGGGTCTACACCGGCGTCTCCGACGGGCGTGTCCTCAGGTGGGGCGGGAGTGCCGCCGG
CTGGAGCACCTTCGCCTACAATGCCAACTACAGGTCGGT----GTAATTAAAA-GCGCAGGATCGTGTTATCAAGTACTC
CGTATGTACTAGATCGATCGCGATTTAAAATTTAGCTTACGTGTGACATGTGGGACGTGTGTAGGAAAATTCCTTTGTGC
TCGGATTCTGGGGTGCCGTCGGAAGAAAAGGAGAGCATATGCGGGCGGCCGCTGGGTGTCCGGTTCAACAGGAAGACCGG
CGAGCTCTACATCGCCGACGCCTACTTGGGGCTCATGAAGGTCGGCCCGGAAGGCGGCGAAGCCCAGGTGCTAGCGACGG
AGGCGGACGGTGTCCGCTTCCACTTCCTCAACGGCCTGGACGTCGATCAGGCCACCGGCGATGTCTACTTCACCGACAGC
AGCGCCAACTATCCCCGGAGGTACCG------------ATCACGCC----------TTAAAAATC------TTTTGTAAC
ATGAGCCCCGGAGATGACGAACCA------ATGTGCGTGCAGGTTTAACACCGAGATCATCATGAACGCCGACGCGACCG
GCCGCCTGCTCAAGTACGACGCGCGGACGAAGCTCGTCACGGTGCTCAAGGTGGATTTGCCGTACCCGAACGGCGTGGCG
CTCAGCCGCGATAGGACGCACCTGGTGGTGGCGCACACGGTGCCGTGCCAGGCGTTCCGGTACTGGCTCAAGGGGCCCAA
GGCCGGGCAGTACGAGCTCTTCGCCGACCTGCCGGGCTACCCGGACAACGTGAGGCGCGACGGGCACGGCGGTTTCTGGG
TGGCGCTCAACCAGGAGAAGGCGCGGCTCAACGCGA---CGGAGGCTCCGGTGAAGCACTTGGTCGGCGTCCGTCTCGGC
GCCGACGGCGTGGAGGTCGAGGAGCTGACGGCCGCCAGGGGCGTCACGCTCAGCGAGGTGGCGGAGCAGAACGGCAACAA
GCTGTGGCTGGGCTCCGTCGAGCTTGATTATATAGGGGTCTTAGTTTGATCGATTGTGTGTTA-GCACCT---T---GGA
TTTGTACGG------GTTCGTTAGTTGTTG--------------------TCTCATTGAGTTAGTAG-------------
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----------------------------------ATAGAGTTCAAGGTCATGGCTTCATATGGTTTCAGAACTACCTGCA
ACGTTTTTCTACAGATGTAATTATGCGAGTATTAG--TTATCCTTCTGTCAAATCCATTTGCTTTGCTTAAGATC-----
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------------------------TTTTT---TTTTCATGTTTTTCTTTCTGAACTTCCACTATTCGTATGGAATACTAT
TTAATAATACAATTTATTAGGAAAACATGAAAGGGTGATTTAAAAAGTCATCCAGAATTCTTTCTACACGAAAAAGGACA
AC-AAAAAAGTTGTTCGATACT----------------------------------------------------------
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>chr3D_4
---ATCAATGGATGATGACTTCCCATGTACTGTCTGAATAAAAATTCCTCTTTCCAACTTAAAGATTGCTCATGTGTTAA
GCGCATACTCACACTACATGACGGCTAAAA-TTTCGCGAAGTGCTGAAAGCTACCATGGCACAGGGTATATGCAAAATAC
GGACTGAACGACCTCCTTTCACTAAATCCCCTTCACCTACCCCGTCCGAAGACCCAATCCCCAAAACCACGACACAATCA
GCCATGGCAAGCAAGCGATCTCGGGAATCCAGGGACTAATCGAAGCCCAGAGGGGTCGGGTCCTACTCCCG-CCCCCATG
CTCGAGCTCCACGAAATGGGCTCCCAAGCCGGGGCCTCAGCTACAGCTAGCGTTTCTGGCTCGGGTAAGCGGACCCGG--
-GACGGAGGAGGCGGAGAGGTAGAGGGCGTAGGGCGGGAGACTGACCTCGTCTGCGGCGGCCGGCGGCGAGCGGCGGTGA
TGGGTCGCGGGGAGGGGACCCGCAACCCGATCCGGTGGGGGCTTAGCAGATCGGAGCCGGGGCCGAGGAGGCGTGGGTTG
CGAGCCGCGACCCATTTCGCGAGTGCAGGGTGGTGGTTTTGTCGCCGTGGTGGGTTTCGGGTCCGCGCCTGCGCGATGGA
CGGCCCCGATGCGGCCGCGACAGCCAGCTTCTCGGTCGGGCGTGGTTGGCCCGGACCCCAGACTACTTTGGTTAGTGGTA
GCCA-GGTTGGAGTGGGTGTGGGTGGACCGAGGCGAACAATACCTGAACCGCGCGGGTTCGGGCCGAACTCAGCAGAGAC
CACAAACGAAACGGGCTCGGTCGGACGTACGGGGGCAGTCCGTCACGTCACGTCACGG----------------------
TTTTACTTACAGTTGGTGTAGGATTTTACGTAGAGTTCGTGGAGGATTGCTACCGTGTCC-------GATGTGATCCATG
GGTCGTGGC-------CTCCCATAAAAGGCATGGAGGTCCGCGCTACGACTTCCCATAGAGGAAAACTTCCGAGGACGAT
GACGACGGCGAC------GATGGGGCGCAACTCGGCGGCG---GTACTCGTCGTGCTTGCCTGCCTCGTTTCCCTCGCAT
CGGCCCAGCAGGTCAAGACGACGGACACGCGCTGGAGCTACCGTCTTCCGCTGCCCGACGGCGTCAGCGGCGCCGAGAGC
CTCGCGTTCGCCGGCAAGGACGGGATCTACACCGGCGTCTCCGACGGGCGTGTCCTCAGGTGGGGCGGGAGCGCCGCCGG
CTGGAGCACCTTCGCCTACAATGCCAACTACAGGTCGGTCGGTGTAATTAAAA-GCTCAAAATCGTGTTGTCAAGTGGG-
-------------TCGATCGCGATTTAAAATTTAGCTTACGTGTGACATGTGGGACGTGTGTAGGAAAATTCCTTTGTGC
TCGGATTCTGGGGTGCCGTCGGAAGAAAAGGAGAGCATATGCGGGCGGCCGCTGGGTGTCCGGTTCAACAGGAAGACCGG
CGAGCTCTACATCGCCGACGCCTACTTGGGGCTCATGAAGGTCGGCCCGGAAGGCGGCGAAGCCCAGGTGCTAGCGACGG
AGGCGGACGGCGTCCCCTTCCACTTCCTCAACGGCCTAGACGTCGATCAGGCCACCGGCGATGTCTACTTCACCGACAGC
AGCACCAACTATCCCCGGAGGTACCG------------TGCACGCCCGATCACGCCTTAATTTTATTTTATTTTTGTAAC
ATCAACCCCGGAGATGACGAATCA------A----CGTGCAGGTTTAACACGGAGATCATCATGAACGCCGACGCGACCG
GCCGCCTGCTCAAGTACGACGCGCGGACGAAGCTCGTCACGGTGCTCGAGGCGGACCTGCCGTACCCGAACGGCGTCACG
CTCAGCCGCGACAGGACGCACCTGGTGGTGGCGCACACGGTGCCGTGCCAGGCGTTCCGGTACTGGCTCAAGGGGCCCAA
GGCCGGGCAGTACGAGCTCTTCGCCGACCTGCCGGGGTACCCGGACAACGTGCGGCGCGACGGGCAGGGCGGTTTCTGGG
TGGCGCTCAACCAGGAGAAGGCGCGGCTCAACGCGA---CGGCGGCTCCGGTGAAGCACTTGGTCGGCGTCCGTCTCGGC
GCCGACGGCGTGGAGGTCGAGGAGTTGACGGCCGCCAGGGGCGTGACGCTCAGCGAGGTGGCGGAGCAGAGCGGCAACAA
GTTGTGGTTGGGTTCCGTCGAGCTTGATTATATAGGCCTCTTAGTTTGATCGATTATGTGGCA-GCGCCT---TTATGGA
TTAGTACGG------GTTCGTTGGTGGTTG--------------------TCTCATTGAGTTAGACTAGCCACAATGGGT
AGTAACATAAAATAGTAACATTGCCCATATTATTATTTTATGTTACTACCTCTATAATGGGGAGTAACATATGTGTGGTA
ACATGCAACACTTTATTTATTAAACTATAGACTCATATTGCCTTGATATGTGTGATGTTACTCATACTAGTAGTAACTAG
CTATGTTACCACATGTCTCTCTTTCTTCATTTATTGCTTGCCACATCATCTATTTTATCTAGATATGTGTGATGTTATTA
CCTATGTTACTCCCACTGTAGGTAGTCTTACTAAATAGAGTTAAAGGTCATGGCTTCGTATGGCTTCAGGACTACATGCA
ACGTTTTTTTGCAGATGTAATTATGCGAGTATTAG--TTATCCTTCTGTCAAATCCATTTGCTTTGCTTAAGATC-----
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------------------------TTTTTCTGTTTGCATGTTTTTCTTTCTGAATTTCGACTATTCGTACGGAATACTAT
TTAATAATACCATTTATTAGGAAAACATGAAAGGGTGATTTAAAAAGTCATCCAGAATTCTTTCTACATGAAAAAGGACA
AC-AAAAAAGTTGTTCGATACT----------------------------------------------------------
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>chr5B_882
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--------------------------------------GTGTAGGATTACAACCGTGTCC-------GATCAGATCAGGC
CACGGGTTTCGTCGCTCTCCCATAAAAGGCACACAGCTGGGTGCAACGATATTCCGTACAGGGCAACTTC----------
--CGACGATGAC------GATGCGGCGCAACCTCGCGGCGATAGTACTCGTCGTGCTTGCCTGCCTCGTCTCTCTAGCCT
CAGCCGAGCAGATCAAGACAACGAACACGCGGTGGAGCTACCGCCTCCCACTGCCCGACGGTGTCAGCGGCGCCGAGAGC
CTCGCCTTCTCCGGCAAGGACGGGGTCTACACGGGCGTCTCCGATGGCCGCGTGCTCAAGTGGGGTGGCAGCGCCGCCGG
CTGGAGCACCTTCGCGTACAATGCCAACTACAGGTCGGT----GTAATTTAAAAGCTAAACATCCCGTGATAGTG-----
-----------ATCAGC-----------AAATTAGC-------TGACATGTGCTGCATCTGCAGGAAAATCCCTTTGTGC
TCAGACTCTGGGGTGCCATCGGAACAAAAAGAGAGCATATGCGGCCGGCCACTGGGTGTCCGGTTCAACAGGAAAACCGG
CGAGCTCTTCATCGCCGACGCCTACATGGGGCTCATGAAGGTGGGGCCGGACGGCGGCGAAGCCCAGGTGCTGGCGACGG
AGGCGGACGGCGTCCCCTTCCACTTCCTCAACGGCCTCGACGTGGATCAGGCAACCGGCGACGTGTACTTCACCGACAGC
AGCGCCAACTACCCCCGCAGGTACCCTACATACA----TGCCCGCCCGATCACGCCTCAATTCGATTCACTTCATCGTGC
TTATGCGCGACGAATCTGTG-----------TGTGCATGCAGGTTTAACACGGAGATCATCATGAACACCGACGCGACCG
GGCGCCTGCTCAAGTACGACGCGCGGACGAAGCAAGTCACGGTGCTGAAGGCCGAGCTGCCATACCCGAACGGCGTCGCG
CTCAGCCGCGACATGACGCACGTGGTGGTGGCGCACACGGTGCCGTGCCAGGCGTTCCGGTACTGGCTCAAGGGGCCCAA
GGCCGGGCGGTACGAGCTCTTGGCGGACCTGCCGGGGTACCCGGACAACGTGAGGCGCGACGGGAAGGGTGGCTTCTGGG
TGGCGCTGAACCAGGAGAGGGCGCGGCTGAACTCAACTGCGGCGGCTCCGGTGAAGCACTTGGTCGGCGTCCGTCTCAGC
GCCGACGGCGTGGAGGTCGAGGAGCTGACGGCCGCCAGGGGCGTGACGCTCAGCGAGGTGGCGGAG---AACGGGGACAA
GCTGTGGCTGGGTTCCGTCGAGCTTGATTACATTGGCATCTTTGCCTGATCGAATTATTTG-------------------
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>chr5B_933
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----------------CTCCCATAAAAGGCACACAGCTGCGTGCAACGATATTCCGTACAAGGCAACTTC----------
--CGACGATGACGATGACGATGCGGCGCAACCTCGCGGCGATACTAGTCGTCGTGCTTGCCTGCCTCCTCTCTCTATCCT
CGGCCGAGCAGATCAAGACGACGAACACGCGGTGGAGCTACCGCCTCCCGCTGCCCGACGGCGTCAGCGGCGCCGAGAGC
CTCGCCTTCTCCGGCAAGGATGGGGTCTACACCGGCGTCTCCGATGGCCGCGTGCTCAAGTGGGGCGGCAGCGCCGCCGG
CTGGAGCACCTTCGCGTACAATGCCAACTACAGGTCGGT----GTAATTACAA-GCTAAACATCGTGTACGTACGACG--
------------TGATC-----------AAATTAGATTACGTGTGACATGTGCGGCGTGTGTAGGAAAATCCCTCTGTGC
TCGGATTCTGGGGTGCCATCGGAACAAAAAGAGAGCATCTGCGGGCGACCGCTGGGTGTCCGGTTCAATAGGAAAACAGG
CGAGCTCTTCATCGCCGACGCCTACATGGGGCTCATGAAGGTGGGGCCTGACGGTGGCGAGGCCCAGGTGCTGGCGACGG
AGGCGGATGGTGTCCCCTTCCACTTCCTCAACGGCCTAGACGTCGATCAGGCTACCGGCGATGTGTACTTCACCGACAGC
AGCGCCAACTACCCCCGCAGGTACCCTACATACA----TGCCCGCCCGATCACGCCTCAATTCGATTCACTTCATCGTGC
TTATGCGCGACGAATCTGTG-----------TGTGCATGCAGGTTTAACACGGAGATCATCATGAACGCCGACGCGACCG
GGCGCCTGCTCAAGTACGACGCGCGGACGAAGCAAGTCACGGTGCTGAAGGCCGAGCTGCCGTACCCGAACGGCGTCGCG
CTCAGCCGCGACATGACGCACGTGGTGGTGGCGCACACGGTGCCGTGCCAGGCGTTCCGGTACTGGCTCAAGGGGCCCAA
GGCCGGGCGGTACGAGCTCTTGGCGGACCTGCCGGGGTACCCGGACAACGTGAGGCGCGACGGGAAGGGTGGCTTCTGGG
TGGCGCTGAACCAGGAGAGGGCGCGGATGAATGCGACTGCGGCGGCTCCGGCGAAGCACCTGGTTGGCGTCCGTCTAAGC
GCCGACGGCGTGGAGGTTGAGGAGCTGACGGCCGCCAGGGGCGTGACGCTCAGCGAGGTGGCGGAG---AACGGCAACAA
GCTGTGGCTGGGTTCCGTCGAGCTTGATTACATCGGTGTCTTTGCCTGATCGAGTTATTTGTTGGCGCCT---TGATTTA
GTACGGTAT------CATCGTTAGCGGTTGTCTCTTTTTTATTAGGTGAATCTCATTGAGTTAGTAA-------------
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----------------------------------GTAGACTTATATTATGAAA-TTCATATGGTTTCAAGACTACCAGCA
ACG-TTTTCTACAGATGTAAGTATGAGAGTATTAG---------------------------------------------
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>chr5D_933
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----------------CTCCCATAAAAGGCATGGAGGTGCGTGCAACGATATTCCGTGCAGAACCTC---------CGAC
GACGACGATGAC------GATGGGGCGCAACCTCGCGGCGATACTACTCGTCGTGCTTGCCTGTCTCGTCTCTCTAGCCT
CGGCCGAGCAGATCAAGACGACGAACACGCGGTGGAGCTACCGCCTCCCGCTGCCCGAAGGCGTCAGCGGCGCCGAGAGC
CTCGCCTTCTCCGGCAAGGATGGGGTCTACACCGGCGTCTCCGATGGCCGGGTGCTCAAGTGGGGCGGCAGCGCCGCCGG
CTGGAGCACCTTCGCGTACAATGCCAACTACAGGTCGGT----GTAAGTACAA-ATTAAACATCGTGTTATCAAATAGTA
GTACGTAGATCATGATC-----------AAATTAGCTTACCTGTGACATGTGCGGCGTCTGCAGGAAAATCCCTCTGTGC
TCGGACTCTGGGGTGCCATCGGAACAAAAAGAGAGCATCTGCGGGCGGCCTTTGGGCGTCCGGTTCAACAGGAAAACCGG
CGAGCTCTTCATCGCCGACGCCTACATGGGGCTCATGAAAGTAGGGCCGGACGGCGGCGAGGCCCAGGTGCTGGCGACGG
AGGCGGACGGCGTTCCTTTCCACTTCCTCAACGGCCTCGACGTGGATCAAGCCACCGGCGATGTGTACTTCACCGACAGC
AGCGCCAACTACCCCCGCAGGTGCCCTACACGCCCGCCCGCCCGCCCGATCAAGCCCCAATTCGATTCACTTCATCATGC
TTATGCGCGACAAATCTGTG-----------TGTGCATGCAGGTTTAACACGGAGATCATCATGAACGCCGACGCGACCG
GGCGCCTGCTCAAGTACGACGCGCGGACGAAGCTCGTCACGGTGCTGAAGGCCGAGCTGCCGTACCCGAACGGCGTGGCG
CTCAGCCGCGACAGGACGCACGTGGTGGTGGCGCACACGGTGCCGTGCGAGGCGTTCCGGTACTGGCTCAAGGGGCCCAA
GGCCGGGCGGTACGAGCTCCTGGCGGACCTGCCGGGGTACCCGGACAACGTGAGGCGCGACGGTCAGGGTGGCTTCTGGG
TGGCGCTGAACCAGGAGAAGGCGCGGCTGAACGCGACTGCGGCGGCTCCGGCGAAGCACTTGGTCGGCGTCCGTCTCAGC
GCCGACGGCGTGGAGGTCGAAGAGCTGACGGCCGCCAGGGGCGTCACGCTCAGCGAGGTGGCGGAG---AACGGCAACAA
GCTGTGGCTGGGTTCCGTCGAGCTTGATTATATCGGCATCTTTGCCTGATCGAATTATTTGTTGGCGGCT---TGATTTG
ATTTATTAGTAGGGTGTCTGTTAGCGGTTG--------------------TCTGATCGAGTTTTTT--------------
-------------------------------------------------------------------CCTTTTTCTTTTG
ACATGAGACTGATTCAGTATTAGACTGTTTTTAAGAAGGAATTAAGTCAGTACAC-------------------------
--------------------------------------------------------------------------------
---------------------------------------------TTATGAAA-TTTGTATGGTTTCACGACTTCCTGCA
ACG-TTTTCTATAAATGAAATTATGCACGTATTTAGCTTTTGTTTCTGTAAAAAAGATATGCTTGATTTGCTTATGTATG
TTTTCTTCGTAATAAGGAGCTCTATTTGACAGCCTTCCAGCAACCACAAATAAGTGGCTATGGTCTTCATGCCGGCCCTG
TTCATCGACTCAGAAAGTCCATGTTCGGTGGTGCATTTCGAATCCAGTGGATCTTCAATGTACGCCTCGACGTCGTTGGT
GTTTCGGTGGTTAGCGGTTTTATTGACATCTGCAAGGATCTTCATAGACTAAGCACCTTTTTTTCCTTTACTCGGAGAGT
CTTTTGCAAAATTTAAGCACATTTGTATTCTCTCGTGCTTTCTTGTTGTATCCATGTGGATCAGTTAAAGCTCTATTTGA
CAGTTGCCTGATGAAAACTAAAATAATTGCTTGCCGATTTTAATCTTCTCCTACCTTTTCCTTTCAGCCGCCCTCCAACC
ACCCCCTCTAATCACAACCTGGTCAACCTCTGACTTCCCTCCACAGGTGATGCGGCGGCCAGCTGCCTTGTCCCCGACTC
CGGTTGCTCTTTGCTCGGCGTTGCTGGACGCCGTGGCCGGCCGCGACACTCATGTCACTTCCTTTGGCTGCACCTCACCA
TCTTCTCTTTCCAAAGAGCAAACATTTTT---TCCATATGTTTTCCTTTTTGAACTTGATTTTTTATGTATTTAGTATC-
---------------ATCAGGAAAACATGAAAGAGTGATTAGAAATCGAAAATGTCATCTCGTGAAAGTTCGCCAGGAGC
TGACGGCTGCCAGGGGCGTGACGCTCAGCGAGGTGGCGGAGAACGGCAACAAGCTGTGGCT-------------------
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--------------------------------GGGTTCCGTCGAGCTTGATTA----------CATCGG-----------
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-------------------------------------------------------------------CATCTTTGCCTGA
TCGAATTATTTGTTGGCGGCTT----------------------------------------------------------
--------------GATTTATTATCCGTAGGGTGTCATTAGCGGTTGTCTGATCGAGTT------------------
>chr3B_2511
ACTT----------------------------------------------------------------------------
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-----------------------GAGGGCCAGTTCTCTCTTCTCCCGTCCAAAAAAGTTGGCTTAGCGGAAACAGCCTCT
TGTTTCTAATGTCCTTCTTTGGACAAGACAACTACACTTTCTATATGGTTCAATCAGATGATGCATCAACCGTGAAAAGG
CTTTTATATGTAAAACGTGGGGATATGATGTAAGGGCATCTGCAACACTGACTCGCAAACCGGACACCGTATTCATCCGC
GGGCAGAAGTGA----------TCATGAATGCGGGAGGCGTCCATCTTCAATA----------CTATTTTTCTTACCGAG
TATGCCATCTTCAATACTACTGGATTGCATGTATGTTTGACTGAGCTCGAAAAACATAGGAATATTCACACAAGATTGGA
GTGGTTAAAATTTTTATCATGGAATCCAGTACAAATGAATCGT---AAAAAAAATCCGATGTACTGAATTTCAATCAAAT
GAAAAATTTCTTTACAAATCCTTTGAATCAAAGCGGTCCTATCTCTTTAAGTAACTAGATGATACTCCATGCATTGCTGC
GGGAATTAGTTGCAATATATTTGAATGAATTTTGATTGTGCATAATATCAATATTTAGATTAATAAAATGTGAATCAAAA
TTAAAAATTTATTAGATTTATCATATTTAATTATGCATAGTTGTATGTGGTGGCGAGTCCTTTTT------------
>chr3D_2511
ACTT----------------------------------------------------------------------------
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-----------------------GAGGGCCGGTTCTCTCTTCTCCCGTCCAGAAAAGTTGGCTTAGTGGATACAGCCTCT
TGTTTCTAATGTCCTTCTTTGGACAAGACAACTACAGTATCTATATGGTTTAGTCAGATGATGCATCAACCGTGAAAAGG
CTCTGATATGTAAAACATGGGGATATGATGTAAGGGCATCTTCAACACTGACCCGCAAACCGGACACTGCATTCGTCTTC
GGACAGAAGTGA----------CCATGAATGCGGGAGGCGGCCATCTTCAATACTTTTCTTTTCTTTTTTTCTTACCGAG
TATACCATCTTCAATACTACAGGATTGCATGTATTTTTGATTGAGCTCGAAAAACATAGGAATATTAACACAAGATTGGA
GTGGATGAAGATTTTATCATGAAATCCAGTACAAATGGATCCTAAGAAAAAAAATCCTATGTAATGAATTTCAATCAAAT
GAAAAATTTCTTTACAAATCTTTTGAATCAAAGCGGCTCTATCTCTTTAAGCAACTAGATGATACTTCACGCGTTGCTGC
GGGAATCAGTTGCAGTATATTTCAATGAATTTTGATTGTGCATAATATCAATATTTAGATTAATAAATTGTGAATCAAAA
TTTAAAATTCATTAGATTTATTATATTTGATTATGCATAGTTGTATGTGATGGTGAGTCCTTTTT------------
>SNPs
--------------------------------------------------------------S-----------S-----
--------------------------------------------------------------------------------
----S---S----------------------------------------------------------------S------
---S----------------------S---------------------S----------------------S--------
-----------S--------S-----------------------------------------------------------
-----------------SS------S------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-----------------------------S--------------------------------------------------
----S----------------------------------------------SS----------S----------------
--------------------------------------S-------------------SSSSSSSSSSSSSSSSSSSSSS
-------------------------------S----------------------------SSSSSSS-------------
---------------------------------------S-----------------------------S-------S--
---------------------------------------------S--------------------------------S-
----S-----------------------------------------S---------------------------------
-----------------------------------------------------S--------------------------
-----S---S-----S--------------------S--------------------------------S--S-SSSSSS
-----------------S------S----------S---------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-----S-------------------------------S--------S---------------------------
---------------------------------------S------S------------------------S--------
------------------------SSSSSS---------------S----------------------------------
-------------------------S---S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-----------------S---------SSS-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S------------------------S-------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S-------S---SS-
--------------S-------------------S-----------------------------------S---------
------S-S-------------------------------------S------------------S--------------
-------S----------------S-----------------S-----------S-------------------------
----S----S-------S---------------S---SS-SSSS-----------S---S-------SS---S-------
--------SSSSSSSSSSSSSS----S-------S------S-----------S----S-S-------------------
---------------S---SS---------------------------SS------------------------------
---------------S-S-S----------------------S---------------------S-S-------------
-----S-------------S----S-------------S---S--------------------S-S--S--S--------
--------S-----------------------------------------------------------------------
---S-------------------------------------------------------S----SSSSSSSSSSSSS
>forward_234
--------------------------------------------------------------------------------
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------------------------------------------------------CAATCCCCAAAACCACGACG------
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-----------------------------------------------------------------------------
>reverse_1653
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------GACCGGCGATGTCTACTTCA--------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_289
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAGGGACTAATCGAAGCCCG-------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_1752
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------GTTTGTAGC
ATGAACCCCGG---------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_862
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TCACGTCACGTCACGGTTTT------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_1790
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TATGTGCGTGCAGGTTCAAC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_1786
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------CCCGGAGATGACGAACCAAT------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_3779
--------------------------------------------------------------------------------
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------------------GCGGCCATAAATGCGGAAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
