>input_sequence_58031
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-----------------------------ATGGTGAGCGGATCGCCGCGGCTCCGGCGGAGGCCTCCTCCCTCCGCGGCG
CTCCTTCTCGTCTAGATAGATGGATCTCGAGTTCTGACTGTTCCTTTGCTGT---TGTTCTT---GCGCAGACGAAGGGA
ACGGGCAGCTTCGGCAAGCGCCGGAACAAGACCCACACGCTGTGCATCCGCTGCGGCCGCCGCAGCTTCCACCTGCAGAA
GAGCACCTGCTCCTCGTGCGGCTACCCCGCCGCCCGCATCCGCAAGTGTAAGTCCCG-CGGCCAGATCCCCTTCCCCTAT
CTTAGC---ACGCGATTCCGGTCCGTCGACC-TAGCTGGTTTAGG------TAGATGTGTTGCTTGGTTCTCGTATGTGC
TGCCTGCGCGAGGCCGTGATTGCTTAGGTTTTC-GGTGCTGTTGGGGTAGCCCCGTCGCTGTTGCCTAGAATCGCATGCA
TGCTAGCTCTGTGGCTCGACGTGGTACGCCTGTGGCTTGATGTGCCGTAGTTTTTATCTGGTTCTAATTTGTGATGAGTA
GTTCTTGTTTGATACGATGTGTTAG---------------------------------------CCTTTGATCATAAGCA
TGATAGTTTGAAGATGCTGGGAATGACTGTAAAAAGGAATTCCTGCAAGACCCAACTCTAGTTATGAATTGTCATATAAG
TATCTTACCTAGCTCTGTTACACCTCTGATAGATGTTCAGCAACTAGAGCTATTA-----ATAAGGTGGATGACTTGGCT
GTTTGTTCACATGTATCATCGATCTTA-----------AAATTTAAGATGTTCATCCTGTTCTAAGCAGTACACATTTGT
AGCCAGCCTTTAGTGATGAAGTTTTAGTTAGTGCAGGGCAGTTAAGATTGATTGTCATATTGCTCTCACTGTCTTCTTAT
AAGTTAAAGCACAT--CTCTCATTTAGTAAGTGTTATG----------------TTTCTTCTGCATCTGATAAGA--TTC
TGTCTTGAAAAA--CAGACAACTGGAGTGTGAAGGCCATCAGGAGGAAGACCACCGGCACCGGGAGGATGAGGTACATGC
GCCATGTGCCCAGGAGGTTCAAGAGCAACTTCAGAGAGGGTATACTTCTCTTCTCTCTTTAGTCTTGTTAATAAAATGTG
CCAGCATATCCACCCATTGTGAGCTCTGTTTTGCTAAACTGCAATCCTGTGAATGTGTTCTGCAGGAACTGAGGCCGCAC
CAAGGAGCAAGGGAGCCTCTTCCAGCGGCAACTAG---------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr6A_1_TraesCS6A01G386000
CAAGAGGTCCTAACCAGCCCCAAATTGCGAA-TTCAGTCACGAGAACGGCGTCAACCGTGAACACAAATCGATACACATT
TCCAGTTCATA---GTACCTTCTTCTTATACGCATCGTTCACCGGGGACATGTACCCACCCAAAACACAGTACCCTCGCT
GCTGCAACTCATCCTTCGCCAACTCTATATGAACGAAACACATCAAAAGATGGGGTAAGAGGTACTCTTCTCACTTTGCT
GATCCCATTCTTAGGCTGTTCTTGAGACTTACTAGTACTAAACACAGTACCACACTGAATCACTGATAGGTGCAGCAGAT
TAGCAAGTGTTGATTGAGGCTTACCGAACATGCGCAGGTGCATGTAGGTGGGGGGATTGAAGCTGCCGGTGGCCACCAGC
ACAACGCCGCCTCGGCTTCCCCCATCCCTGCCGTCAT----------CAAGAAACGAACGGGGGATCAGTCCAGCTATAC
GCATCAAGCAACCCAAGAAAATCCGAGAGCAGATTCTCTTCTTTCTGCTTACCGATTTGGATCCATGGAGAGCTTCTCCG
TGGGGAAGGGGAGAGGAGCTTCCGCCTCCT------CCATGGCCGCCCTCTGCAAATCCTCAGCCGAGCCGAGCTGATCT
CTCGCTGCGG---TTCTCTCTTCCTGCGGT-------------------------GCGCCGTCGGCGGGAGGCCGGCAAT
CCGGCCGGCGTGCGCTG--GAGCAAGATTCCCAAGTAGGAGGC-----TTTTTTTTAGAATGCTGGACTCTGCGTGCCCG
TGTGGGTGGGCATCGCGATATGGGCCTTGTTGGGCCGCCGTGGTCATGCCCAGG-GGCCCCGCTAGAATAA-------TA
ACAAACAGGTCCACGGAGAGATGC--AGCCTATCAAACGGGCCGGGCCCATGTG----GCCTTGGGCAGCCCCGCGCGGC
TCTATAAAGCCGCCTCCTCGAGCCGCTAGGTTTTGGTGCTCTCTTCTTCCTCCTCTCCTCCTCCCTCGGCGGCGGCGCAG
GCGGCGCGGAGGCGACAGGCGAAGGCGAAATGGTGAGCGGATCGCCGCGGCTCCGGCGGAGGCCTCCTCCCTCCGCGGCG
CTCCTTCTCGTCTAGATAGATGGATCTCGAGTTCTGACTGTTCCTTTGCTGT---TGTTCTT---GCGCAGACGAAGGGA
ACGGGCAGCTTCGGCAAGCGCCGGAACAAGACCCACACGCTGTGCATCCGCTGCGGCCGCCGCAGCTTCCACCTGCAGAA
GAGCACCTGCTCCTCGTGCGGCTACCCCGCCGCCCGCATCCGCAAGTGTAAGTCCCG-CGGCCAGATCCCCTTCCCCTAT
CTTAGC---ACGCGATTCCGGTCCGTCGACC-TAGCTGGTTTAGG------TAGATGTGTTGCTTGGTTCTCGTATGTGC
TGCCTGCGCGAGGCCGTGATTGCTTAGGTTTTC-GGTGCTGTTGGGGTAGCCCCGTCGCTGTTGCCTAGAATCGCATGCA
TGCTAGCTCTGTGGCTCGACGTGGTACGCCTGTGGCTTGATGTGCCGTAGTTTTTATCTGGTTCTAATTTGTGATGAGTA
GTTCTTGTTTGATACGATGTGTTAG---------------------------------------CCTTTGATCATAAGCA
TGATAGTTTGAAGATGCTGGGAATGACTGTAAAAAGGAATTCCTGCAAGACCCAACTCTAGTTATGAATTGTCATATAAG
TATCTTACCTAGCTCTGTTACACCTCTGATAGATGTTCAGCAACTAGAGCTATTA-----ATAAGGTGGATGACTTGGCT
GTTTGTTCACATGTATCATCGATCTTA-----------AAATTTAAGATGTTCATCCTGTTCTAAGCAGTACACATTTGT
AGCCAGCCTTTAGTGATGAAGTTTTAGTTAGTGCAGGGCAGTTAAGATTGATTGTCATATTGCTCTCACTGTCTTCTTAT
AAGTTAAAGCACAT--CTCTCATTTAGTAAGTGTTATG----------------TTTCTTCTGCATCTGATAAGA--TTC
TGTCTTGAAAAA--CAGACAACTGGAGTGTGAAGGCCATCAGGAGGAAGACCACCGGCACCGGGAGGATGAGGTACATGC
GCCATGTGCCCAGGAGGTTCAAGAGCAACTTCAGAGAGGGTATACTTCTCTTCTCTCTTTAGTCTTGTTAATAAAATGTG
CCAGCATATCCACCCATTGTGAGCTCTGTTTTGCTAAACTGCAATCCTGTGAATGTGTTCTGCAGGAACTGAGGCCGCAC
CAAGGAGCAAGGGAGCCTCTTCCAGCGGCAACTAGGCGTGACAGTCTCCATTTGTTGCCCTAAGCGAAGCC---------
----------------------------------CTGATCATCAAACTTAGC-TTTTTTGTTGTTTTCTACTGGAACTCT
TATGTTTCTATGTTGAGAGGCAGACTATATGATGCCTGGTTATGTTATTTGCACAATTGTCGTGGACGTTAATCCTTCAG
TTTTGAATGTTGAATTGTGTCGATGTCCTGTGTTAGATGC--TGCATCTATTGTTCAATGTGCTATTTGTGACGAGTCTG
TTTTTTGTTGTTTCAATATGAGATCTTTGGTCAAGTTTTTATGCATGTAATAGACCATGACATGGTCACTCACATAGTGT
TTGTCTGTTCATATTTACGCTGTGCAGGTCCAGCAAGAACATAAAAATGCAACTTCCAATGTGAATAGCTCAATGGTTCA
TTTCTCTCTTCGCATTTTGAGTTCCAACATTGTCTTG--TACACAGAACAGAGAGATTGTATGGAAGGTCATTTTGAGTT
TCCCAGCTTTGTTTTCTAACTCAAAACTCGTACTCCCTCCGTTGTAAAATTCTTGTCTTAACTAAGACAAAAAAATTATT
TTGCCATGCTTCTTTGAACCTGCTATTGTGTGATTTAGCCGTAGCTCAGTGTTCATCTTTTGTTAAGTATCTTGAGTAGA
TCACTGTCATGTATTTTGTTGCTATGTTAGAGTGCAGTGTCTTAACTAAGACGAAAAAATTGTGACTGAGGGAGTACAAT
GTTAGATTTTTAGCATTCTTTGTTTGAAGAGCTAAACTGTTCTTTTTAACTTGGCTCACACTTTATTTTGGTGCAGAGAT
CCAAAATATTGGAAAATAAATTATTTATGACGTACACATTTGTATTACATCTCGGAAAATATCAAACCCAAATATGAATC
ATGCCTTGAAAAAAGTCAACAGACTCAACAGTCAAAATAGG--------------------------------TCGCTAT
ACCGCCTCGCTTGGGTTGTACTCCCTCCATTCCAAAATTTCTACTCCTATAAAAATGTGAGTTGGTGACGATGGT
>chr6B_1
CAAGAGGTCCTGGCCAGCCCCAAATTGTGAATTTCAGTCACGAGAACCGCGTCAACC---AACACAAACCGGTACACATT
CCCAGTTCCGCACGGTACCTTCTTCTTGTAGGCGTCGTTCACCGGCGACATGTATCCACCCAAAACACAGTACCCTCGCT
GCTGCAGCTCGTCCTTTGCAAGCTCTGTATGAATTTAACACATCAAAAGATGGGGCCAGAGATCATCTTTTCACTTTGCT
GATCCTATTCTGAAGCTGTTCTTCAGACTTACTAAGCACACT-----------------------------------GAT
TAACAAGTTTTGATTAAGGCTTACCGAACATGCGCAGGTGCATGTAGGTGGGGGGATTGAAGCTGCCGGTGGCCACCAGC
ACCACACCACCTCGATTCCCCCCATCCCTGCCGTCATCCAGACGAATCAAGAAACGAATGGCGGATTAGTGTAG--AGAT
GCATCAAGCAACTGAAG-AAATCCGAGCGCAGATTTCTTCTTTTTTGCTTACCGATTTGGATCCATGGAGAGCTTCTCCG
TGGGGACGGGGAGAGGAGCTTCCGCCCCCT------CCATGGCCGCCCTCCGCAAATCCTCAGATGAACCGAGCCGA---
--------------TCTCTCTTCCTGGGGT-------------------------GCGCCGACGGCGGGAGGCCGGCGAT
CCGGCCGGCGTGCGCCG--GGAGCAGATTCCCTAGTAGGAGTTTTTTTTTTCTTTCAGAATGATGGACTCTGTGTGCCCG
TGT--GTGGGCATCGCGAAATGGGTCTTGTTGGGCCGCCCTAGCCATGCCCAGGAGGCCCCGCTAGAATAA--TACAGTA
ACAAACAGGTCCACGGAGAGAGATATAGCCTGTCAAACGGGCCGGGCCCAGGCG----GCCTTGGGCAGC----------
TCTATAAAGCCTCCGCCTCGAGCCGCTAGGTTTTGGTGCTCCCTTCTTCCTCCTCTCCTCTTCCCTCGGCGGCGGCGCAG
GCGGCGCGGAGGCGACAGGCGAAGGCGAAATGGTGAGTT----------GCTCCGGCGGAAGCCTCCTCCCTCGGCGGCG
CTCCTTCTCGTC----TAGATAGATCTGGGGTCCTGACTGTTCCTTTGCTGT---TGTTGTTGTCGCGCAGACGAAGGGA
ACGGGCAGCTTCGGCAAGCGCCGGAACAAGACCCACACGCTGTGCATCCGCTGCGGCCGCCGCAGCTTCCACCTGCAGAA
GAGCACCTGCTCCTCGTGCGGCTACCCCGCCGCCCGCATCCGCAAGTGTAAGTCCCG-CCCCCAGATCCCTCGGGCATAC
TCTGCTCATATGCGGCTCCGTCCCTTCAAAGATGTCTCTTTTAGCTAGCTATAGATGCGGCGCTTGGTTCTG--------
-GCCCGCGCGAGGCCGTGATTGCTTAGGGTTTTAGATGCTGTTGTGGTAGCCCCATCGCCGTTGCCTCGAGTCGCATGCT
AGCTCTGT------------------------TGCCGTGATGTGCCATGATCTT--------------------TGAGTA
GCTCATGCTTGGTCTGATGTGTTTAGCTTTTGACCGCAAGCATGATAGTTTGAACTTTGAAGATCCCTTGATAAAAAGCA
TGATAGTTTGAAGATGCTAAAGTTGACTGTGAAATTGAACTGTGGTTCATGTTACAT-----------------------
-----------GCTCTGTTAACCCTGGCGGAGTTGCTGGAATTAGGGA--TATTA-----GTAAGGTGGATTACTTGGTT
GTCTGTTCTCATGCCCCTCTATGTTTACTGTTGATCACAAAAATCGGGTGTTGATCCTGTTATAGGTTGCTTGCGTTTGC
A-CCAGTCTTTAGTGGTTAGGTTTGATTTAGTGCAGGGTAGTTG-GATTGATTGTCATGGTGCTCTTGATGTCTTTCTGT
AATTTGGAGCATAGCTCTCACATTTTGCTGTTGATGAAAGCAAGTGTTTTAAGTTTTCTTCTTCATCTGATGAGAAATTC
TTCCTTG--AAAAACAGACAACTGGAGTGTGAAGGCCATCAGGAGGAAGACCACCGGCACCGGGAGGATGAGGTACATGC
GCCATGTGCCCAGGAGGTTCAAGAGCAACTTCAGAGAGGGTATACTTCTCTTCTCTCTTTTAGTCCTGT--TAAAATGTG
TCAGCATATCCACCCATGATGAGCTCTGTTGTGCTAAACTGCAATCATGTGAATGTGTTCTGCAGGAACTGAGGCCGCAC
CAAGGAGCAAGGGAGCCTCTTCCAGCGGCAACTAGGCGCGGCGGCCTTAACTTGTTACGCTAGGCGGAGCCCTGATCATC
AAACTTAGCTTTTTTGTTGCTTTCTACTGGAACCCTGATCATCAAACTTAGC-TTTTTTGTTGCTTTCTACTGGAACTC-
TATGTTTCTATGTCGAGAGGCGGACGATATGATGCCTGGTTATGTTATTTGCACAATTATCGTGGACGTTAATCCTTCAG
TTTTGAATGTTGAATTGTGTCGATGTCCTGTGTTAGATGCTCTGCATCTCTTGTTCAATGCGCTATTTGTGATGAGGCTT
TT---TGTTATTTCAATCTGAGTGTGTTGATCAAGTTGTGATGCA-----------------------------------
--------------------------------------------------------------------------------
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>chr6D_336
--------------------------------------------------------------------------------
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-------------------CTTACCGAACATGCGCAGGTGCATGTAGGTGGGGGGATTGAAGCTGCCGGTGGCCACCAGC
ACCACACCACCTCGATCCCCCCCATCCCTGCCGTCATTCAGATGAATCAAGAAACAAATGGTGGATTACGATGG--ATAT
GAATCAAGCAATCAAAG-AAATCCAAGAGCAAATTCTCTTCCTTTTGCTTACCGATTTGGATCCATGGAGAGCTTCTCCG
TGGGGAGGGGCACCTCCACCTCCTCCATGGCCATGGCCACGGCCGTCCTCTTCAAGCCCCCAGCCGAGCAAGAAGCCGGC
AAAAAATCTTGGCTTCTCTCTTCCTGGGGTCACTGTGCGCCGCCCGCCTGAGGTCGCGCCGCCGGCGAGAGGTCGGCAGT
TCGTCCGGCGTGTGCGGCAGGAGCAGATTCC--ACTAGCAGTTTTTTTTTTGGGAGAGAGTTCCACTAGCAAGC------
--T--GTGGGGATCGCGAACTGGGCCCGTTAGGCCATTCATCTAAAGGAACCAACTGGGCGGAGGACGCCTGCTAAAGGA
ACGAACAGGTCCACTGTCC------------ATAAAACGGGCCGGGCCGGCCCACGTAGCCTTGGGCAGCTCCGCGCGGC
TCTATAAAGCCGCCTCCTCGAGCCGCTAGGTTTTGGTGCTCTCTTCTTCCTCCTCTCCTCTTTCCTCGGCGGCGGCGCAG
GCGGCGCAGCGGCGACAGGAGAAGGCGAAATGGTGAGCTGATCGCCGCGGCTCCGGCGGAGGCCTCCTCCCTCCGCCGCG
CTCCTTCTCGTCTAGATGGATAGATCTGGGGTTCTGACTGTTCCTTTGCTGT---TGTTGTT---GCGCAGACGAAGGGA
ACGGGCAGCTTCGGCAAGCGCCGGAACAAGACCCACACGCTGTGCATCCGCTGCGGCCGCCGCAGCTTCCACCTGCAGAA
GAGCACCTGCTCCTCGTGCGGCTACCCCGCCGCCCGCATCCGCAAGTGTAAGTCCCAACCTCCAGATCCCTAGGTTGCC-
-CTGCTCATATGCGACTCCGTTCCTTCAAAGATATCTCTTTTAGC------TAGATGCGGCGCTTCATTCTGGCC-----
------CGTGAGGCCGTGATTGCGTAGGTTTTC-GATGCTGTTATGGTAGCCCCATATTTGTTTCCTTGAATCGCATGCT
AGCTCTGT------------------------TGCCCTGATGTACCATGATCTT--------------------TGAGTA
GCTCATGTTTGATGTGATGTGGTAG---------------------------------------CTTTTGATCACAAGCA
TGATAGTTTGAAGATGCTATGGTCTACTGTGAAATTGAACTGTAGTTCATCTTACAT-----------------------
-----------GCTCTGTTAACCCTGATGAAGTTGTTGGAATTAGTGA--TATTATTAGTATAAGGTCGATTACTTGGTT
GTCTGTTCAAATGCTCCTGTATGTGTATTGTTGATCACAAAAT--------------------------------TTTGC
AGCCAGCCTTTAGTGTTTAAGTTTGATTTAGTGCATGAGAGTTG-GATTGATTGTCATGGTGCTCTTGATCTCTTTCTAT
AATTTGAAGCATAG--CTCACATTTTGCTGTTGACGGAAGCAAGTGTTT-AAGTTTTCTTCTTCATCTGATAAGAAATTC
TGTCTTG--AAA--CAGACAACTGGAGTGTGAAGGCCATCAGGAGGAAGACCACCGGCACCGGGAGGATGAGGTACATGC
GCCACGTGCCCAGGAGGTTCAAGAGCAACTTCAGAGAGGGTATATTTCTGTTCTCTCTTTAGTCCTGTTAATAAAATGTG
CCAGC--ATCCACCCATTGTGAGCTCTGTTTTGCTAAACTGCAATCCTCTGAATGTGTTCTGCAGGAACTGAGGCCGCAC
CAAGGAGCAAGGGAGCCTCTTCCAGCGGCAACTAGGTGTGACAGTCTCCATTTGTTGCCCTAAGCGAAGCC---------
----------------------------------CTGATCATCAAACTTAGCTTTTTTTGTTGATTTCTACTGGAACTC-
TATGTTTCTATGTCGAGAGGCAGACGATATGGTGCCTGGTTATGTTATTTGCACAATTGTCGTGGACATTAATCCTTCAG
TTTTGAATGTTGAATCGTGTCGATGTCCTGTGTTAGATGCT--GCATCTCTTGTTCAATGTGCTATTTGTGATGAGTCTT
TT---TGTTGTTTCAATATGAGATATTTGCTCAAGTTGTTATGCATGTAATAGATCATGACATGGTCACTCACATAGTGT
TTGTCTGTTAATATTTATGCTGTGCAGGTCCAGCAAGAACATAAAAATGCAACTTTCAATGTGAATAGCTCAATGGTTCA
TTTCTCTCGTAGCATTTTGAGTTCCTCCATTGTCTCTCATACATAGAACAGAGAGATTGTATGGAAGGTCGTTTTGAGTT
GCACAGTTTCGTTTGCTAACTCAAAAATCA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TACAAT
GTTAGATTTTTAGTATTCTTTGTTTGAAGAGCTAAACTGTTCTTTACTG--------------------------GAGAT
CCAAAACATTGGAAAATAAATTATTTATGATGTACGCATTTGTATAGCATCTCAGAAAATATCAAACCCAAATATGAAT-
---------AAAAAGTCAACAGACTCAACAGTCAAAATGTTAACGGCCGAAATTTATGGTTAGAGGTGGTAGCTCGCTAT
ACCGCCTCGCTTGGGTTGTACTCCCTCCATTCCTAAATCTCTACTTCTATAAATATGTGAGTTGGTGATGATGGT
>chr2B_1002
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------------------------------TGGTAAGCGGATCGCGGCGACTCCGGCGGAAGCCTCCCCCATCCACCGCG
CTCCTTCTCGTCTGGATGTGTAGATCCGTGGTCCTGACTGTTCCTTTGCTGTTGTTGTTGTT---GCGCAGACGAAGGGA
ACGGGCAGCTTCGGCAAGCGCCGGAACAAGACCCACACGCTGTGCATCCGCTGTGGCCGCCGCAGCTTCCACCTGCAGAA
GAGCACCTGCTCCTCGTGTGGCTACCCCGCCGGCTGCATCCGCAAGTGTAAGTCCCG-CCGCCAGATCCCCTTCCCCTAT
CTTAGC---ATGCGATTCGAGTCCTTCTGCC-TAGCTGCTTTAGG------CAGATGTGGTGCTTGGTTC----------
---CTGCGCGAGGCCGTGATTTCTGAGGGTTTC-GATGTTGTTGTGGTAGCCCCATCGCTGTTGCCTTGAATCGCATTCA
TGCTAGCTCTGTGGCTCGACGTGGGACGCATGTGGCTTGATGTC--------TTTATCTGAACTTTCATTG---TGAGTA
GTTCTTGTTTGATGTGATGTGGCTG---------------------------------------CCTTTGATCATAAGCA
TGATAGTTTGAAGATGTTGTGAAT--------------------------------------------------------
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>SNPs
-----------SS--------------S-------------------S---------SSS--------S--S--------
S-------SSS----------------S--S--S-----------S--------S-------------------------
------S---S-----S--S-S----S------SSS-------------------SS----S-SS----S----------
-----S-----S-S---------S----------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
--S-----S------S----------------------------------------------------------------
--S--S--S-----SS-S----------------------------------------S--S----S---SS--SS---S
-------------S---S--------------------------S-----------------------------------
------S-------------------S-----------------------------------------------S--SSS
SSSSSSS-SS----------------S----------------------------------S------------------
---------------S----SSSS--------S--------SS--------S---S----------------S-------
---SS-------------S--------------------S-S-S------------------------------------
---------------------SSS--------------------------S-S-----------------S---------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------------------S-----S-S-----------------------------S--------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
----------S-------------S--S----------S--------------------S-----------S-SSSSSSS
S----------------------------------S--------S---------S------------S------------
------------------------S----S----------------S-SS-S--------SSSS-SSS---SSS------
-------------SS-----------------------------------------------------------------
-------------------S----------S---SS---S-SSS-SSSSS-SS-SS-SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---------SS---SSSSS--S----SSSSSSSSS--SS---------------------S------S-
--S----------SSS-SSSSSSS-----------------S--SS-S----S--------S--S-SS-SSSS-S----S
---------------S-S------S-S-----------S----SS-------------SS------SSS------SS---
--S--S-----S-S-----S-----S-SSSS--S-SSS------------------------S-----------------
-------SS-----------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S---------------S
-------------S-----------S------------------------------------------------------
-------------------------------------------------S----------------------S------S
--SSS-------------------S----S-------S----------------S-------------------------
---------S-------S-------------------------------------S------------------------
--------S-S--------------SS--------SS------S--------------------------S---------
S-S---S--S----S-----------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
-------------S-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
------S-----------------------S----S---------SS------S-------------------------S
SSSSSSSSS-----------------------------SSS---------------------------------------
---------------------------------S----S------S-------S--------------S------
>forward_126
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--------------------------TATACGCATCGTTCACCGGG----------------------------------
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>reverse_1495
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------------------------------------------------------GTCGCTGTTGCCTAGAATCG------
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>forward_471
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---------------------------------------------------AAACGAACGGGGGATCAGTC---------
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>reverse_1720
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---------------------------------------TTCCTGCAAGACCCAACTCT---------------------
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>forward_498
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------------------------------------------------------------------------------AC
GCATCAAGCAACCCAAGA--------------------------------------------------------------
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>reverse_1722
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-----------------------------------------CCTGCAAGACCCAACTCTAGT------------------
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>forward_667
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-------CTGCGGTTCTCTCTTCCTGC-----------------------------------------------------
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>reverse_2730
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---------CATATTTACGCTGTGCAGGTCC-------------------------------------------------
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