>input_sequence_58026
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-------------------------------------------------------------------------------A
TGGCCGCCGACGCCGCCTACGTGAAGCGGGTGCTGCTCGCCTGCAACGGCGGCGGCGACGCCGTCTCGCGGGGGG--TCG
CCGTCGGCCTAGCCAGGCACGGCTGCAGGTACTCCCTCTCACCTCGCCGCCGTTCCC-------------CTTCTTCTTC
CTGTTGCTCGGTTCTGAATCTAAGCGCGCGCGCGCGCGT--------ACAGGCTGGTCCTGGTGGGCGACGAGGGCGCCC
TGGCCGCGACGGCGGAGGAGGCGCGGCGCTGCGCGGCCGGAGGGGCGGCGGCCGTCGCGGTGGTTGGGCTGGACTTCGCG
GCCTGCGACGAGGCGGCCGTCGGCGCCGCGGTGGAGGCGGCCTGGCGCTGCTTCGGGGACGGCGGACTCGACGCCCTGGT
CAACTGCTGCTCCTACGAGGGTATGCACATACTACTGACAGACAC--TG--ATACACATGCCCGATTTCCCATCTGACAG
AAATCTTTTACACATGCCCAAGCCCGACTAATCACCAACCCAAATG----------------------TTGTCTGAATCT
TTCAGTCAGCTTATCGTCCACTAATTTCACCCATGGACCTCTTTG-ACCATGAAATGTTTGCTTG--ACTGTAAGAGCAG
GGGAAGTGCAAGACTGCCTCAGCGTGACTGAAGATGAGTACAACAAGACCATGAAAGTCAATGTAATCACACCCTGGCTT
CTGATAAAGGCGATCGCCAAGCGGTTCCGCGATGCGCAGTCCGGCGGCTCTGTGGTATGCTTGACCCAGATCATCGGCGC
CGAGAGAGGATTGTATCCGGGGGCGGCGGCATATGGCACAAGTTTAGGCGCCGTTCACCAGCTCGTCAGAGTAAGCCTTC
TTCCTTGTTACCAAAAAAGCCTGAATGATTAATCACGGAAATCCTGAATGCGTACATGACCA-TGATGTTCTTTGTTTTT
TCAGCTATCGGCGATGGAGCTCGGCAAGCACAAGATCAGGGTGAATGCCGTCTGCCGCGGCCTCCACCTGGGGGACAAGT
TCCCTGTCTCTGTTGGGGAGGAGAAGGCCGAGAAGGCGACCAGGGAGGTAATGCCGCTGCGGCGGTGGCTGGACCCAGAG
AAGGACCTCGCTTCCACGGTGCTGTACCTGGTCGGCGACGACTCCCGCTTCATGACAGGCACCACCATCTACGTCGACGG
CGCACAGTCCATAGTGCGCCCTCGCATGCGTTCCTTCCTGTAG-------------------------------------
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----------------------------------------
>chr4A_1_TraesCS4A01G339500
ACTTGTTACTTGTTACTCGTTGTGAATTACCTTGCCACCAAACTATCCTGTTACCGATATTTTCAGTGCTTGCAGAGAAT
ACCTTACTGAAAACCGCTAGTCATTTCCTTCTACTCCTCGTTGGGTTCGACACTCTTACTTATCGAAAGGCTACAATTGA
TCCCTATACTTGTGGGTCATCATTCTCTGGCAACTTTAGGCCCCATTCCGAAGTTCTCTGGCTTCCCAAACTGGCCAGC-
-----------CAGCCAAGCCAGCTTCGCACGGGAGTGGTGAAGCGTTCGGCAACGACTGCT---TCTGCTCCGTCGGCA
TGGGCCATAGAGGAGAGGCACGGGCTAGTCTGACACTGGGGTCGTGAGGTCACTGGTTTGCTCAGGAGTGTCTTCTCTAA
TTGAAATGGTACGCAAGTCACTTTGGAATGGCATTCTTGTGTAAATTCATTCAACTCATTCTTCGTCGTTTGGAGGAGCT
ACGCTTCCGCTGCTCCACGAAATTGTGTTGCGGGAGGGCTATGCTTCCTAAAGCTGGCTTCGCGGACCTGGGCTGTTTGG
CATCGCTCTTGTTGACGTATAAATGTATTGTCTAGTCTATTTTATCAGATCGGTTTTTTAGTTGCATTGGCTAGAGCATG
CATTTCTACAGCTCTACGCATGGAGCTGGAGAGAAACCGAGCAGGCCATAAGTTGACTAGAGGATGGCAAGTTAGGGGCA
AGCTGCTGAAGCACGAAAGTTATTATGCT----TGGCAATTAAAGTTGTCATCCTCACATCATCAAACTTGCG-TCTAAA
GCCGTTCGGAGCTGGCATT-------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GTCTCGAACGTTCGATACTTATCAGATTCGTAAA----TTTTGTAA
CACCAACGTGTATGGAGTGGCCCGACATTGCAGACGACGACTGGGTAAAATTTCGTCTTGTTATAACTCTTGACGTGTCG
ACGCTCGCTGCAAAGGCGACGACGCTGTTGGAGTGTTTGTCGCTGCTGCCAGCCGGGAAGAGCAAGAAGGGGAAAGGGGA
TGGCCGCCGACGCCGCCTACGTGAAGCGGGTGCTGCTCGCCTGCAACGGCGGCGGCGACGCCGTCTCGCGGGGGG--TCG
CCGTCGGCCTAGCCAGGCACGGCTGCAGGTACTCCCTCTCACCTCGCCGCCGTTCCC-------------CTTCTTCTTC
CTGTTGCTCGGTTCTGAATCTAAGCGCGCGCGCGCGCGT--------ACAGGCTGGTCCTGGTGGGCGACGAGGGCGCCC
TGGCCGCGACGGCGGAGGAGGCGCGGCGCTGCGCGGCCGGAGGGGCGGCGGCCGTCGCGGTGGTTGGGCTGGACTTCGCG
GCCTGCGACGAGGCGGCCGTCGGCGCCGCGGTGGAGGCGGCCTGGCGCTGCTTCGGGGACGGCGGACTCGACGCCCTGGT
CAACTGCTGCTCCTACGAGGGTATGCACATACTACTGACAGACAC--TG--ATACACATGCCCGATTTCCCATCTGACAG
AAATCTTTTACACATGCCCAAGCCCGACTAATCACCAACCCAAATG----------------------TTGTCTGAATCT
TTCAGTCAGCTTATCGTCCACTAATTTCACCCATGGACCTCTTTG-ACCATGAAATGTTTGCTTG--ACTGTAAGAGCAG
GGGAAGTGCAAGACTGCCTCAGCGTGACTGAAGATGAGTACAACAAGACCATGAAAGTCAATGTAATCACACCCTGGCTT
CTGATAAAGGCGATCGCCAAGCGGTTCCGCGATGCGCAGTCCGGCGGCTCTGTGGTATGCTTGACCCAGATCATCGGCGC
CGAGAGAGGATTGTATCCGGGGGCGGCGGCATATGGCACAAGTTTAGGCGCCGTTCACCAGCTCGTCAGAGTAAGCCTTC
TTCCTTGTTACCAAAAAAGCCTGAATGATTAATCACGGAAATCCTGAATGCGTACATGACCA-TGATGTTCTTTGTTTTT
TCAGCTATCGGCGATGGAGCTCGGCAAGCACAAGATCAGGGTGAATGCCGTCTGCCGCGGCCTCCACCTGGGGGACAAGT
TCCCTGTCTCTGTTGGGGAGGAGAAGGCCGAGAAGGCGACCAGGGAGGTAATGCCGCTGCGGCGGTGGCTGGACCCAGAG
AAGGACCTCGCTTCCACGGTGCTGTACCTGGTCGGCGACGACTCCCGCTTCATGACAGGCACCACCATCTACGTCGACGG
CGCACAGTCCATAGTGCGCCCTCGCATGCGTTCCTTCCTGTAGGTA------------------------TGGTTGCCCA
TGTCTGGGTTTCCACATTCCATCAGGATGACTCCTGATATGTTGTTTGTCGAATA---ACAGTG----------------
------------------GGTCTCTGTGAATGCAATAATTAA------------TGGCAGAGTAAAGATCAAATTTGAAA
AGGACTACCCAGAAGCAACATGAGCGGCACAGCAGGCCCCTCTTCAGATTAAAAG---------TTTTTGAAGAACAATC
TGCTAAACTTTATTAAAGGAGAGTAATGTTTACAGGGACTCATACAGGATCATAACCATCATCGCCGACATCAAAACAAA
CTCTTGAAACTGATTGTATGCCTTAATAGTTCTGGAACGAGATACGCAAAGCCCATCACATAAAATTGGAGCAAAACTTC
AGGTGAAA-GAACGGGTAATGATGTGGAGTG----------AGTCAGCATAGGATGCACAATTGCTTGGTGGGTTGGTTG
GTTCACTCGTCCTTCTCCGCCAGCGCAGCCTTGCGGCTGCTCCTCTCAGCGAGGACCGACTTGGTCTTCTCCAGCACGCC
GAAGAAGATGGACCCGCCGATGCCGATCCACAGAACTCGCGGCTCGATGCCCTGCAAGCGTCGTCAAAATCATAAGAAGC
ATTGTGGTTAGCATTAGCTTATCAAATAAATTTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNACACACACACACAAAAGGAAACGT------------------------TATACCTTCAAAAAGGCGCCGGGACCTT
CCTCCCTCAAGATCGTCTTAGCACAGCTTACAATTCCAGAGTATTGCTTTGTTTGCCCCTGCAATGGAAGTTGGAACCAG
TGGGTCAGTACTCAATTATGTAAAAGTGGATTTTGGTGTG
>chr5B_188
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TGGCAACTTTAGGCCCCGTTCGGAAGTTCTTTGGCTTCCCAAACTGGCCAGCT
TCTCGACCTGCCAGCCAAGCCAGCTTCACACGGGAGCGGCAAACCGTTCGGCGGCAGCGGCAACCTCTGCTCCGTCAGCA
TGGGCCAGAGAGGAGAGGCACGGGCTTGTCTGATACTGGAGGCGTGAGGTCACTGATTTGCCCAGGCGTGTTTTATCTAA
TCGAAACGGTACGCAAGTCACTTCAGAATGGCATTCTAGTGTAAATTCATTCAACTCATTCTTCGTCGTTTGGAGGAGCT
ACACTTTCGTTGCTCCACGAAATTGCATTGCGGGAGGGCTGGGCTTCCCAACGCTGGCTTTGCGGAGCTGAGCCGTTCGG
CATTGCTCCACACACGGAGCTGGTGAAGCGTGAAGCCA------------------------------------------
----------------------------GAGAGGATCTGAACGGGCCATAAGTTGACGAGAGGATGGCAAGTTAGGGGGA
AGTTCCTGAAGCACGCAAGTTATCATGCCTGCCTGGCAATTAATGTTGTCATCCTCACGTCAATAAACTTGCCTTCGAAA
GCCGTTCGGAGCCTGCATGCAATGGGGTAGCTAAAAGTAAACTGAAGGGTGTGCACACTTAGGAAAATTCTACTTAATTC
AAGTGCCATACAACATTTGACAACCAAAAAGCACACACTCGAAATCTGCAAAGTATAACATGATAAAGAAAAAATTTCTC
AGAATTCTAGCTACGCCACTGCTGGCACGTGCTCGTACCGTACGTTTGGTACTTATATGAGATTCTTAATTTTTTTTTAA
CGCCAACGTGTATGGCGTGGCCCAGCATTGCAGATGATGACTGGGTAAATTTT-GTCTTGTTATAACTCTCACGTGGCAC
GCACGCAGC---AAGGCGACGACGCACTTGACA-------CGCTGCTGCCGGGAAG-------AAGAAGGGGAAGGGGGA
TGGCTGCCGACGCAGCCTACGCGAAGCGGGTGCTGCTCGCCTGCAACGGCGGCGCCGACGCCGTCTCGCGGGGGC--TCG
CCGTCGGCCTCGCCAGGCACGGATGCAGGTACTCCCTCTCACCTCGCCGCCGTTCCCCTTCTCCTCCCCTCTTCTTCTTC
CTGTTGCTCGGTTCTGAATCTA----CGCGCGCGCGCGT--------ACAGGCTGGTCCTGGTTGGCGACGAGGGCGCCC
TGGCCGCGACGGCGGAGGAGGCGCGGCGCTGTGCAGGTGGTGGAGAGGGTGCCGTCGCGGTGGTGGGGCTCGACTTCGCG
GTCTGCGACGAGGCGGCCGTCGGCGCCGCGGTGGACGCGGCGTGGCGCTGCTTCGGGGACGGCGGGCTCCACGCCTTGGT
CAACTGTTGCTCCTACGAGGGTATGCACATACTACTGACAGATAC--TGTGATACACATGCCCAATTTTCAGTCTGACTG
AA---TTATACACACGCCCAAGCCCAGCTGATCACTATCATCCTAATTGAGCTTCAGAACTTCAGATCTTCTCTCACTCT
TCTAGTCAGCTTATATTCCACTAATTTCATCCGTGGACCTCTTCCAACCATGAAATGTGTGATTG--ACTGTATGAGCAG
GGGAAGTGCAAGACTGCCTCAGCGTAACTGAAGATGAGTACAACAAGACCATGAAAGTCAATGTAATCACACCTTGGCTC
CTGATAAAGGCCACGGCGATGCGGTTCCGGGATGCGCAGTCGGGCGGCTCCGTGGTGTGCTTGACCCAGATCATCGGCGC
CGAGAGAGGATTGTATCCGGGGGCGGCGGCATACGGCACAAGTTTGGGCGCCGTTCACCAGCTCGTCAGAGTAAGCCTTC
CTTCCTGTTGTCCAAGAATCCTGG----ATGCTCGTAGAAATCCTGAATGCCTACATTGCCA-TGATGTTCTTTGTGTTT
TCAGCTGTCGGCCATGGAGCTCGGCAAGCACAAGATCAGGGTGAACGCCGTCTGCCGCGGCCTGCACCTGGGGGACAAGT
TCCCCGTCTCTGTTGGGGAAGAGAAGGCCGAGAAGGCGACCGGGGAGGTGATGCCGCTGCGGCGGTGGCTGGACCCGGAC
AAGGACCTGGCGTCCACTGTGCTGTACCTGGTCGGCGACGACTCCCGCTTCATGACGGGCACCACCATCTACGTCGACGG
CGCGCAGTCCATCGTGCGCCCTCGCATGCGCTCCTTCCTGTAGGTAGGTTTGTCATGCCTGTCCTGGGACTGGTTGGCCA
TGTCTGGATTTCCACTTTCCATCAGGATGACTCCTGATATGTTGTT-GTTGAATA---ACAGTGGTTTGTGCAAAGAGCG
CAAGTGTGATAATTAAGCAGTCTCTGTGAATGCAATAATTAA------------TGGTAGAGTAAAGATCAAAATTGACA
AAGAATACCCAGAAGCAACATGAGGGGCAGAGCAGGCCCCTCTTCAGATTAGAAG---------TTTTTGAAGAACAATC
TGCTAAACTTTATTAAAGGAGAGTAATGTTTACAGGGACTCATAAAGGATCATAACCATC---GCCGACGTCAAAACAGA
CTCTTGAAACTGATTGTATGCCTT-ATAGTTCTGGAACGAGAAATGCAAAGCCCACCACATAAACTTGGAGCAAAACTTC
AGGTTTAAGGAACGGGTAATGGTGTAGAGTG----------AGTCAGCATAGGATGCACAGTTGGTTT---GGTCGGTTG
GTTCACTCGTCCTTCTCCGCCAGCGCAGCCTTGCGGCTGCTCCGCTCAGCGAGCACCGACTTGGTCTTCTCCAGCACGCC
GAAGAAGATGGACCCACCGATGCCGATCCACAGAACTCGCGGCTCGATGCCCTGCAAGCATCGTCAAAATCATGAGAAGC
ATTGTGCTTAGCATTAGATTATCCAATA----------------------------------------------------
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----------------------------------------
>chr5D_972
AGCAGCGAAGG---------------------------------------------------------------------
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-------------------------------------------------------G-------AAGAAGGGGAAAGGGGA
TGGCCGCCGACACCGCCTACGCGAAGCGGGTGCTGCTCGCCTGCAACGGCGGCGGTGACGCCGTCTCGCGGGGGG--TCG
CCGTCGGCCTCGCCAGGCACGGCTGCAGGTACTCCCTCTCACTTTTC------------------CCCTTCTTCTTCTTC
CTGTTGTTCGGTTCTGAATCTA--------CGCGCGCGT--------ACAGGCTGGTCCTGGTGGGCGACGAGGGCGCCC
TGGCCGCGACGGCGGAGGAGGCGCGGCGCTGCGCGGCCGGAGGGGCGGCGGCCGTCGCGGTGGTGGGGCTGGACTTCGCG
GCCTGCGACGAGGCGGCCGTCGGCGCCGCGGTGGAGGCGGCGTGGCGCTGCTTCGGCCACGGCGGGCTCGACGCCCTCGT
CAACTGCTGCTCCTACGAGGGTATGCACATACTATTGACAGACAC--TG--ATACACATGCCCAATTTTCCATCTGACAG
AAATTTTTTACACATGCCCAAGCCCGACTAATCACCAACCCAAATGTTTTGCTT---------AGTTCTTCTCTGAATCT
TTCAGTCAGCTTATCATCCAGTAATTTCATCCATGAACATCTTTGAACCATGCATCTGTATTTGGCTACTGTATGAGAAG
GGGAAGTGCAAGACTGCCTCAGCGTGACTGAAGATGAGTACAACAAGACCATGAAAGTCAATGTAATCACACCTTGGCTC
CTGATAAAGGCCATGGCGAAGCGGTTCCGGGATGCGCAGTCCGGCGGTTCTGTAGTATGCTTGACCCAAATCATCGGCGC
CGAGAGAGGATTGTATCCGGGGGCGGCGGCATATGGCACAAGTTTGGGCGCCGTTCACCAGCTCGTCAGAGTAAGCCTTA
TTTCCTGTTAATAACAACAAGC--CTGAATGCCCACAGAAATCCTGAATACCTAAATGACCA-TGATGTTCTTCGTTTTT
TCAGTTGTCGGCCATGGAGCTCGGCAAGCACAAGGTCAGGGTGAACGCCGTCTGCCGTGGCCTGCACCTGGGGGACAAGT
TCCCTGTCTCCATGGGGGAGGAGAAGGCCGAGAAGGCGACCGGGGAGGTGATGCCGCTGCGGCGGTGGCTCGACCCGGAG
AAGGACCTGGCGTCCACTGTACTCTACCTGGTCGGCGATGAGTCCCGTTTCATGACGGGCACCACCATCTACGTCGACGG
CGCGCAGTCCATCGTGCGCCCTCGCATGCGTTCCTTCCTGTAGGTAGGTTAGTCATGCCGATCCTGGGGCTGGTTGGCCA
TGTCTGGGTTTCCACATTCCATCAGGATGACTCCTGATATGTTGTT-GTTGAATAGTAACAGCAGTTTGTGCAAAGAGAT
CAACTGTCATAATTAAGCGGTCTCTGTGAATGCAATAATTAACAGGGTTTAAGATGGTAGAGTAAAGATCAAAATTGACA
AAGACTATCCAGAATCAACATGAGTGGCACAGCAGGCCCTTCTTCAGATTAAAAGACATAGTCTTTTTTCAAGAACAATC
TGCTAAACTTTATTAAAGGA--GTAATGTTTACAGGGACTCATACAGGATCATAACCATC---GCCGACGTCAAAACAAA
CTCTTGAAACTGATTGTATGCCTT-ACAGTTCTGGAACGAGAAACATAAAGCCCATCACATAAATTTGGAGCAAAACTTC
AGGTGAAAGGAACGGGTAATGGTGTGGAGTGAGGAGCCGCAAGTCAGCATAGGATGCACAATTGGTTT---GGTTGGTTG
GTTCACTCGTCCTTCTCCGCCAGCGCAGCCTTGCGGCTGCTCCTCTCAGCGAGCACCGACTTGGTCTTCTCCAGCACGCC
GAAGAATATGGATCCGCCGATGCCGATCCACAGAACTCGAGGCTCAATGCCCTGCAAGCATCGTCAAAATCATAAGAAGC
ATTGTGGTTAGCATTAGCTTATCTAACAGTAATTTTTAAAGAGTTTAAACTGTTTTTCTCACACACAATAAAA-------
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----------------AAAAGGAAACGTTCGAAGTGACTGTATCGGTGGTACTATACCTTCAAAAAGGCGCCGGGACCTT
CCTCTCTCAAGATGGTCTTAGCACAGCTTACAATTCCAGAGTATTGCTTTGTTTGCCCCTGCAATAGAAGTTGGAACCAT
TCGGTCAGTACTCAATTATGTAAAAACGGATTTTGGTGTG
>chr7B_985
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---------------------------------------------------------------AAGAAGGGGAAAGGGGG
TGGCCGCCTACACCGCCTACGCGAAGCAGGTGCTGCTCGCCTGCAACGGCGGCGGCGACGCCGTCTCGCGGGGGG--TCG
CCGTTGGCCTCGCCAGGCACGGCTGCAGGTACTCCCTCTCACTTTTC------------------CCCTTCTTCTT---C
CTGTCGTTGGGTTCTGAATCTA--------AGCGCGCGCG--CACACACAGGCTGGTCCTGGTGGGCGACGAGGGCGCCC
TGGCCGCGACGGCGGAGGAGGCGCGGCGCAGCGCGGCCCAAGGGGCGGCGGCCATCGCGGTGGTTGGGCTGGACTTGGCG
GCCTGCGACGAGGCAGCCGTCGGCGCCGCGGTGGACGCGGCGTGGCGCTGCTTCGGGGACGGCGGGCTCCACGCCCTTGT
CAACTGCTGCTCCTTCGAGGGTATGCACATACTACTGACAGACAC--TG--ATACACATGCCCAATTTTCCATCTGACAG
AATTTTTTCACACATGCCCAAGCCCGACTAATCACCAACCTAAATGA-TTGCTC---------AGTTCTTCTCTGAATAT
TTCAGTCAGCTTATCATCCAGTAATTTGG-----------------TCCATGCATCTGTATTTGGCTACTGTATGAGCAG
GGGAAGTGCAAGATTGCCTCAGCGTGACTGAAGATGAGTACAACAAGACCATGAAAGTCAATGTAATCACACCTTGGCTC
CTGATAAAGGCGATAGCGAAGCGGTTCCGGGATGCGCAGTCGGGCGGCTCCGTGGTTTGCTTGACCCAGATCATCGGCGC
CGAGAGAGGATTGTATCCGGGGGCTGCGGCATACGGCACAAGTTTAGGCGCCGTTCACCAGCTTGTCAGAGTAAGCCTGC
TTTCCTGTTACCAAAAAAGCCTGAATGATTGCTCACGGAAATCCTGAATGCATACATGACCA-TGATGTTCTTCGTTTTT
TCAGCTGTCGGCGATGGAGCTCGGCAAGCACAAGATCAGGGTGAACGCCGTCTGCCGCGGCCTCCACCTGGGGGACAAGT
TCCCTCTCTCTGTTGGGGAGGAGAAGGCCGAGAAGGCGACCGGGGAGGTGATGCCGCTGCGGCGGTGGCTGGACCCAGAC
AAGGACCTCGCTTCCACGGTGCTGTACCTGGTCGGCGACGACTCCCGCTTCATGACAGGCACCACCATCTATGTCGACGG
CGCACAGTCCATTGTGCGCCCTCGCATGCGTTCCTTCCTGTAGGTAGGTT------------------------------
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>chr7B_985
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---------------------------------------------------------------AAGAAGGGGAAAGGGGA
TAGCCGCCGACACCGCCTAAGCGAAGCGGGTGCTGCTCGCCTGCAACGGCGGCGGCGACGCCGTCTCGCGGGGGGGGTCG
CCGTTGGCTTCGCCAGGCACGGCTGCAGGTACTCCCTCTCACTTTTC------------------CCCTTCTTCTT---C
CTGTCGTTGGGTTCTGAATCTA--------AGCGCGCGCGCACACACACAGGCTGGTCCTGGTGGGCGACGAGGGCGCCC
TGGCCGCGACGGCGGAGGAGGCGCGGC----------CCAAGGGGCGGCGGCCATCGTGGTGCTTGGGCTGGACTTGGCG
GCCTGCGACGAGGCAGCCGTCGGCGCCGCGGTGGACGCGGCGTGGCGCTGCTTCGGGGACGGCGGGCTCCATGCCCTTGT
CAACTGCTGCTCCTTCGAGGGTATGCACATACTAATGACAGACAC--TG--ATACACATGCCCAATTTTCCATCTGACAG
AATTTTTTCACACATGCCCAAGCCTGACTAATCACCAACCTAAATGA-TTG-TC---------AGTTCTTCTCTGAATAT
TTCAGTCAGCTTATCATCCAGTAATTTCG-----------------TCCATGCATCTGTATTTGGCTACTGTATGAGCAG
GGGAAGTGCAAGATTGCCTCAGCGTGACTGAAGATGAGTACAACAAGACCATGAAAGTCAATGTAATCACACCTTGGCTC
CTGATAAAGGCGATAGCGAAGCGGTTCCGGGATGCGCAGTCGGGCGGCTCCGTGGTTTGCTTGACCCAGATCATCGGCGC
TGAGAGAGGATTGTATCCGGGGGCTGCGGCATACGGCACAAGTTTAGGCGCCGTTCACCAGCTCGTCAGAGTAAGCCTGC
TTTCCTGTTACCAAAAAAGCCTGAATGATTGCTCACGGAAATCCTGAATGCATACATGACCA-TGATGTTCTTCGTTTTT
TCAGCTGTCGGCGATGGAGCTCGGCAAGCACAAGATCAGGGTGAACGCCGTCTGCCGCGGCCTCCACCTGGGGGACAAGT
TCCCTCTCTCTGTTGGGGAGGAGAAGGCCGAGAAGGCGACCGGGGAGGTGATGCCGCTGCGGCGGTGGCTGGACCCGGAC
AAGGACCTCGCTTCCACGGTGCTGTACCTGGTCGGCGACGACTCCCGCTTCATGACAGGCACCACCATCTATGTCGACGG
CGCACTGTCCATTGTGCGCCCTCGCATGCGTTCCTTCCTGTAGGTAGGTT------------------------------
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----------------------------------------
>chr5B_985
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---------------------------------------------------------------AAGAAGGGGAAAGGGGA
TAGCCGCCGACACCGCCTAAGCGAAGCGGGTGCTGCTCGCCTGCAACGGCGGCGGCGACGCCGTCTCGC-GGGGGGGTCG
CCGTTGGCTTCGCCAGGCACGGCTGCAGGTACTCCCTCTCACTTTTC------------------CCCTTCTTCTT---C
CTGTCGTTGGGTTCTGAATCTA--------AGCGCGCGCGCACACACACAGGCTGGTCCTGGTGGGCGACGAGGGCGCCC
TGGCCGCGACGGCGGAGGAGGCGCGGC----------CCAAGGGGCGGCGGCCATCGTGGTGCTTGGGCTGGACTTGGCG
GCCTGCGACGAGGCAGCCGTCGGCGCCGCGGTGGACGCGGCGTGGCGCTGCTTCGGGGACGGCGGGCTCCATGCCCTTGT
CAACTGCTGCTCCTTCGAGGGTATGCACATACTAATGACAGACAC--TG--ATACACATGCCCAATTTTCCATCTGACAG
AATTTTTTCACACATGCCCAAGCCCGACTAATCACCAACCTAAATGA-TTGCTC---------AGTTCTTCTCTGAATAT
TTCAGTCAGCTTATCATCCAGTAATTTCG-----------------TCCATGCATCTGTATTTGGCTACTGTATGAGCAG
GGGAAGTGCAAGATTGCCTCAGCGTGACTGAAGATGAGTACAACAAGACCATGAAAGTCAATGTAATCACACCTTGGCTC
CTGATAAAGGCGATAGCGAAGCGGTTCCGGGATGCGCAGTCGGGCGGCTCCGTGGTTTGCTTGACCCAGATCATCAGCGC
TGAGAGAGGATTGTATCCGGGGGCTGCGGCATACGGCACAAGTTTAGGTGCCGTTCACCAGCTCGTCAGAGTAAGCCTGC
TTTCCTGTTACCAAAAAAGCCTGAATGATTGCTCACGGAAATCCTGAATGCATACATGACCA-TGATGTTCTTCGTTTTT
TCAGCTGTCGGCGATGGAGCTCGGCAAGCACAAGATCAGGGTGAACGCCGTCTGCCGCGGCCTCCACCTGGGGGACAAGT
TCCCTCTCTCTGTTGGGGAGGAGAAGGCCGAGAAGGCGACCGGGGAGGTGATGCCGCTGCGGCGGTGGCTGGACCCGGAC
AAGGACCTCGCTTCCACGGTGCTGTACCTGGTCGGCGACGACTCCCGCTTCATGACAGGCACCACCATCTATGTCGACGG
CGCACAGTCCATTGTGCGCCCTCGCATGCGTTCCTTCCTGTAGGTAGGTT------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr6A_985
--------------------------------------------------------------------------------
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---------------------------------------------------------------AAGAAGGGGAAAGGGGA
TAGTCGCCGACACCGCCTAAGCGAAGCGGGTGCTGCTCGCCTGCAACGGCGGCGGCGACGCCGTCTCGC-GGGGGGGTCG
CCGTTGGCTTCGCCAGGCACGGCTGCAGGTACTCCCTCTCACTTTTC------------------CCCTTCTTCTT---C
CTGTCGTTGGGTTCTGAATCTA--------AGCGCGCGCGCACACACACAGGCTGGTCCTGGTGGGCGACGAGGGCGCCC
TGGCCGCGACGGCGGAGGAGGCGCGGC----------CCAAGGGGCGGCGGCCATCGTGGTGCTTGGGCTGGACTTGGCG
GCCTGCGACGAGGCAGCCGTCGGCGCCGCGGTGGACGCGGCGTGGCGCTGCTTCGGGGACGGCGGGCTCCATGCCCTTGT
CAACTGCTGCTCCTTCGAGGGTATGCACATACTAATGACAGACAC--TG--ATACACATGCCCAATTTTCCATCTGACAG
AATTTTTTCACACATGCCCAAGCCCGACTAATCACCAACCTAAATGA-TTG-TC---------AGTTCTTCTCTGAATAT
TTCAGTCAGCTTATCATCCAGTAATTTCG-----------------TCCATGCATCTGTATTTGGCTACTGTATGAGCAG
GGGAAGTGCAAGATTGCCTCAGCGTGACTGAAGATGAGTACAACAAGACCATGAAAGTCAATGTAATCACACCTTGGCTC
CTGATAAAGGCGATAGCGAAGCGGTCCCGGGATGCGCAGTCGGGCGGCTCCGTGGTTTGCTTGACCCAGATCATCGGCGC
TGAGAAAGGATTGTATCCGGGGGCTGCGGCATACGGCACAAGTTTAGGCGCCGTTCACCAGCTCGTCAGAGTAAGCCTGC
TTTCCTGTTACCAAAAAAGCCTGAATGATTGCTCACGGAAATCCTGAATGCATACATGACCA-TGATGTTCTTCGTTTTT
TCAGCTGTCGGCGATGGAGCTCGGCAAGCACAAGATCAGGGTGAACGCCGTCTGCCGCGGCCTCCACCTGGGGGACAAGT
TCCCTCTCTCTGTTGGGGAGGAGAAGGCCGAGAAGGCGACCGGGGAGGTGATGCCGCTGCGGCGGTGGCTGGACCCGGAC
AAGGACCTCGCTTCCACGGTGTTGTACCTGGTCGGCGACGACTCCCGCTTCATGACAGGCACCACCATCTATGTCGACGG
TGCACAGTCCATTGTGCGCCCTCGCATGCGTTCCTTCCTGTAGGTAGGTT------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr3B_985
--------------------------------------------------------------------------------
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---------------------------------------------------------------AAGAAGGGGAAAGGGGA
TAGCCGCCGACACCGCCTAAGCGAAGCGGGTGCTGCTCGCCTGCAACGGCGGCGGCGACGCCG--TCTCGCGGGGGGTCG
TCGTTGGCTTCGCCAGGCACGGCTGCAGGTACTCCCTCTCACTTTTC------------------CCCTTCTTCTT---C
CTGTCGTTGGGTTCTGAATCTA--------AGCGCGCGCGCACACACACAGGCTGGTCCTGGTGGGCGACGAGGGCGCCC
TGGCCGCGACGGCGGAGGAGGCGCGGC----------CCAAGGGGCGGCGGCCATCGTGGTGGTTGGGCTGGACTTGGCG
GCCTGCGACGAGGCAGCCGTCGGCGCCGCGGTGGACGCGGCGTGGCGCTGCTTCGGGGACGGCAGGCTCCATGCCCTTGT
CAACTGCTGCTCCTTCGAGGGTATGCACATACTACTGACAGACAC--TG--ATACACATGCCCAATTTTCCATCCGACAG
AATTTTTTCACACATGCCCAAGCCCGACTAATCACCAACCTAAATGA-TTGCTC---------AATTCTTCTCTGAATAT
TTCAGTCAGCTTATCATCCAGTAATTTCG-----------------TCCATGCAATTGTATTTGGCTACTGTATGAGCAG
GGGAAGTGCAAGATTGCCTCAGCGTGACTGAAGATGAGTACAACAAGACCATGAAAGTCAATGTAATCACACCTTGGCTC
CTGATAAAGGCGATAGCGAAGCGGTTCCGGGATGCGCAGTCGGGCGGCTCCGTGGTTTGCTTGACCCAGATCATCGGCGC
CGAGAGAGGATTGTATCCGGGGGCTGCGGCATACGGCACAAGTTTAGGCGCCGTTCACCAGCTCGTCAGAGTAAGCCTGC
TTTCCTGTTACCAAAAAAGCCTGAATGATTGCTCACGGAAATCCTGAATGCATACATGACCA-TGATGTTCTTCGT----
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-------------------------------------------GGAGGTGATGCCGCTGCGGCGGTGGCTGGACCCGGGC
AAGGACCTCGCTTCCACGGTGCTGTACCTGGTCGGCGACGACTCCCGCTTCATGACAGGCACCACCATCTATGTCGACGG
CGCACAGTCCATTGTGCGCCCTCGCATGCGTTCCTTCCTGTAGGTAGGTT------------------------------
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>chr3D_1219
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TGGCCGCGACGGAGGAGGAGGCGCGACACTGTGCGGGAGATGGG--GGAGGCCGTCGCGGTGGTGGGGCTAGACTTTGCG
GCCTGCAACGAGGCGGCCGTCGATGCCGCGGTGGAGGCGGCGTGGTGCTGCTTTGGCCACGACAGGCTCAATACCCTGGT
TAACTGCTGCTCCTATGAAGGTATGCATACACTACTGACAGATACTGTG--ATACACATGCCCAATTTTCTGTCTGGCAT
AA---GTATACACATGGGCAAGCCCAATTAATCACCAACCTACTCCACTA----------------------------AT
TTCAGTCATCTTACCATCCACTGATTTCA-----------------ACCATGAAATGTTTGCTTG--GCCTTATGAGCAG
GGGAAGTGCAAGACTGCCTCAGTGTAACTGAAGATGAGTACTCA-----------------------CACACCTTGGCTG
CTAATAAAGGCGATGGCGAAGTGGTTCTGGGATACGCAGTCCGGCGGTTCCATGGTATGCTTGATCCAGATCACCGGCGC
CGAGAGAGGATTCTACCCAAGGGTTGTGGCATACTGCACGAGCTTAGGCGTTGTTCATCAGCTCGTCAGAGTAAGCCTAC
CTTCCTGTTACAAAGAG---GC--ATGAATGCTCACAGAAATCCTGAATGTCTACATGTTCATTGATGTTCTTTGTT---
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>SNPs
-SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S---S--------S----------------------
---------------------------S--------S--SS--S--------SS-SS-S--S--------------S---
-------S------------------S------S-----S-S-------------S-----S----S----S--S-----
-S----S----------------SS------------S------------------------------------------
--S---S--S---------------SS-------------SS------S--S--------S-----S---S--S---S--
---S----SSSSSSSS-SSSSSS--S-SS--SS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-S-S--S-S--------------S--------------------S-
--S-S----------S-------S----S--------------S--------------S---SS--------S---S---
------------SS----S-------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------SS--S-----S-S-------SS--SSSSSSS---------S---
-S-------------S-------SS---------S--S-----------S---S----------------SSSSSS-SSS
S-S-S-SSSSSS-------------SS---SSSSSSSSSS----------S-SSS-SSSSSSS-----------------
---------------------S----------------------------------------------------------
----------S---------------------------------------------------------------------
----------------------SSSS------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-----------------------S--------------
---------------------------------------------------------------S----S-----------
----S-----------------------------------------------------------------S---------
---------------S-------------S-------------------------------------------S------
-------------------------------------------------------------------------S-----S
--------------S--S-----------S--------------------------------------------------
--------------------------------------------------------------------------------
--S-S-------------------------SS-------------------S----------------------------
------S--------------------------------------S----------------------------------
-----------------------------------------S-------S------------------------------
--------------------------------------------------------------------------------
------------S---------------------------------------------------------------S---
----------------------------------------------S--S------------------------------
---------------------------------------------------------S---------------S----S-
-S----------------------S-------------------------------------------------------
------------------------------------------------------------SSS------S----------
------------------------S-----------------S---------------------S---------------
---------------------S------------------------------------------S--SSSS---------
-----------------------------------------------------S--------------------------
-----------------------------------------------------------S--------------------
-----------------------S----SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS----------------------------------------------------------------
----S--------S---------------------------------------------------S-------------S
-S-----------------------SS-------------
>forward_1159
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-------------------CGACGCTGTTGGAGTGTTTG-----------------------------------------
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>reverse_2948
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-------------------------------------------------------------------GGTGGGTTGGTTG
GTTCACT-------------------------------------------------------------------------
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----------------------------------------
