>input_sequence_58010
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------ATGTTTCTTTCTGTCATCCGGCCGTTGGATTTTTCGCCCC
ACATCCAAA----TCCCCGGCTCCGCCACCGTCACGCTCTCAAGTCTCGCCGGCGGCGCCATGCTCCTCGCCAATCTCCT
CCCGCCGGCGCGCTGCCCACTGGCCTCCCCTCTCCGCTGCCAGGCCCCGGCCCACCACCACCAGCCCGCCGT------CT
CCCGCGGCCTCCTCCTCCGCGGCGCCGGCTCCCCCGTCGTCAAGCGCCTGCCCGCCGGCGACTGGCTCCTCTGGTACCAC
TCCGGGGCGCGCGTCGCGCTCGCCACCTCCCCCGACGGCCTGCGCTGGAGCCCGCCCGTGGCGCCCGACCCGCTGCTGCC
CTCCACCGACTGGTGGGTCTTCGACACCGCCGCCGTCCGCCCCGGCGACGTGCTCGTCATCTCCGGCCCCGACGCGCCG-
--T---CGTCCCGCCGCCTCCCGCCCTCCTCCTCATCCGCCGTGTACTGGCTCTACTACACCGGCTCCAACGACGCGCGC
CTCGCGTCGTCCCCGTTCCCCGCCGCGGACGTCGCCGCGCTGCCCGGCCTCGCCATCAGCCAGGACGGTCGCCACTGGGC
GCGCATCGAGGGGGGCCACCACACCGGCGCGCTCCTAGGGGTCGGGGAGGACCACCCGCAGGGGTGGGAGAAGCGCTGCG
CGGCAGCCCCCAAGGTGGTGATGCACGCCGACGGGGACCTCCGGATGTACTACCACTCGTTCGATGAAATGTCGCAGAGG
CACGCGGTCGGGGTGGCCAGGTCCAGGGACGGCATCCGGTGGGAGAGGGTGGGGAAGGCGCTTGAGGGAGGCGGGCCTGG
GTCGTTCGACGAAGGCGGGGTGCGGCAGGGGCATGTCGTCCGTGACCGCGCCGCCGGTCGGTACATGATGGCGTACGAGG
GTTTGGATGGCAATGGTGGGGTGAGCATTGGGTTGGCCGTGTCGGAGGACGGGCTGAGAGGGTGGAGGCGGTGCAGTGAA
TCACCAGCGCTGCGCCCGTCAGAGGATGATGATGAGTGGGACGTCGCTGGGGTCGGCGCCCCGTGCCTGGTGCAAATGGA
TGGGCCGTATGATTGGAGACTCTATTACATGGGCGTAAGGAAGGATGGTGAGGCTGCTATTGGGATGGCATATTCAGAGG
GTCAGGGTCTTCCGAGGTTCAACAAGTGTGACGCTCTTCTCATGTAA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>chr2A_1_TraesCS2A01G552300
AAAAAAAAACATTTTTTGAACTTTCTGAATTTTTTAATGGGCCCGGCCAGGTGATCGCTTGACCATTTGTTATGATCAAT
TTTGGAAAACACGAACATTTTTAAGAATATTGAACGTTTTCTAAAAGCACAAACATTTTTTAAAAGTTTCCGAACAATTT
TCAAAACATGAACTCTTAAAAAAGAACAATAGAATTTAAAAATAAAAATGATACAAAAAAGGAAAAGGAAAGTAAAAAGA
AAGAATAAAAGTAAACAAAAAAACAAAAAAAGAGAAGCAGGAAAACCGGTTCACAGAGCCTTCGAGAAGGAGCCCAAAAC
CAGAAAAACCGGCTGGGAAACTCTAGAAAGTTCCCAAAACTGGAAATTGCTGCCACACTTTAATGGGCCCGGCCAGGTGA
TCGCTTGATCGCCAGGTCTTTATGCGAAAGGTCGACACCCTGACGCGGAAAATCCTACTTGACGCACATTGCATCAAGTT
GTCAGGCTTTCGCACAAAGGTTTGCCAGCGAGGGATGACTTGGGCCGGCCTGCCCACCACTTCTGCCATCCCGGTTTTGG
GAACCTTCCAGGGGTTCCTGAACCGGTTTTCCTCGGTTTTGGAAACTTTCTAGAAGGTTTAATCGTAGGAAACATGTCGA
ACAACGGAGAAACCGGGCCTTCTAACCACGATGCAAACAAGTGCAAATGGGCAAAAACCGATACAGGTAACCAAACACGC
CTTAATACTCCCTTCATTTCACAATATAGTGCGTTCATGTTTCTCGAGATCTAAGTTTGACCATAAATTTAACTAACGAG
ACCGATTGCGGCGGAAGCAAAAATTATACGACTAAATTGTACCGGTTGATATATAATTTTTGCTTCCGTCGCAGTTAGTC
TTGTTTACTAAATTTATAATTAAATTTAGATCTCGAAAAACGCGGACACACTATATTATGAAATGGAGGGAGTATATGAT
ACTCCTTCCCACTATTAGAAACAAACGCTTGAATTTCGTGATGTTTCTTTCTGTCATCCGGCCGTTGGATTTTTCGCCCC
ACATCCAAA----TCCCCGGCTCCGCCACCGTCACGCTCTCAAGTCTCGCCGGCGGCGCCATGCTCCTCGCCAATCTCCT
CCCGCCGGCGCGCTGCCCACTGGCCTCCCCTCTCCGCTGCCAGGCCCCGGCCCACCACCACCAGCCCGCCGT------CT
CCCGCGGCCTCCTCCTCCGCGGCGCCGGCTCCCCCGTCGTCAAGCGCCTGCCCGCCGGCGACTGGCTCCTCTGGTACCAC
TCCGGGGCGCGCGTCGCGCTCGCCACCTCCCCCGACGGCCTGCGCTGGAGCCCGCCCGTGGCGCCCGACCCGCTGCTGCC
CTCCACCGACTGGTGGGTCTTCGACACCGCCGCCGTCCGCCCCGGCGACGTGCTCGTCATCTCCGGCCCCGACGCGCCG-
--T---CGTCCCGCCGCCTCCCGCCCTCCTCCTCATCCGCCGTGTACTGGCTCTACTACACCGGCTCCAACGACGCGCGC
CTCGCGTCGTCCCCGTTCCCCGCCGCGGACGTCGCCGCGCTGCCCGGCCTCGCCATCAGCCAGGACGGTCGCCACTGGGC
GCGCATCGAGGGGGGCCACCACACCGGCGCGCTCCTAGGGGTCGGGGAGGACCACCCGCAGGGGTGGGAGAAGCGCTGCG
CGGCAGCCCCCAAGGTGGTGATGCACGCCGACGGGGACCTCCGGATGTACTACCACTCGTTCGATGAAATGTCGCAGAGG
CACGCGGTCGGGGTGGCCAGGTCCAGGGACGGCATCCGGTGGGAGAGGGTGGGGAAGGCGCTTGAGGGAGGCGGGCCTGG
GTCGTTCGACGAAGGCGGGGTGCGGCAGGGGCATGTCGTCCGTGACCGCGCCGCCGGTCGGTACATGATGGCGTACGAGG
GTTTGGATGGCAATGGTGGGGTGAGCATTGGGTTGGCCGTGTCGGAGGACGGGCTGAGAGGGTGGAGGCGGTGCAGTGAA
TCACCAGCGCTGCGCCCGTCAGAGGATGATGATGAGTGGGACGTCGCTGGGGTCGGCGCCCCGTGCCTGGTGCAAATGGA
TGGGCCGTATGATTGGAGACTCTATTACATGGGCGTAAGGAAGGATGGTGAGGCTGCTATTGGGATGGCATATTCAGAGG
GTCAGGGTCTTCCGAGGTTCAACAAGTGTGACGCTCTTCTCATGTAAGGTGAGCTGTGTTATCTATGTTTCAGGGAATGT
ATGTTGATGCGGAACTTCTGCATGGCTCATT--TGACAATGCTGATCAAGTGATCATGATAAAATTTGATGTTGGTTTTA
CTTAGCGTCTTGATTCAACCTGCTTCGGTGCTTTGTAACACCAATGTATTTACACTACTCTCAATTTCCTAACATTGCTA
TCCCCCACATCCGTGATCCGTCAGAGCATGTCAGACAAGCAATGGTGTTTGGCAAAATAGTAAGAAAGAATTCCTTATAT
AGCACTATTTTAAATGTTGTTTCCCTATTTAACACTGAAAAACTTTTCCTTCCTCATATAACACCAAATCTAAATTTTGT
CCCCTTTGTGACACTTTCATCCATTTTGAGTACTAATGGTGTTAATTGACATGAGAAAAGACGATTTT-ACCCATAGTGC
ATTATTCGCAGGAATAAAAAGGCAATTTTT-TTTTCTGTGG--TTACATGAACAATGAAGTTTCAGTGCGCCATGACACC
GTCGGGTATTTCAGGTACATGGAGAAACTGTATACGT--GTGCAAATGCTGAGGTAC-TATAGGACAATAGACAAACCCT
TTTTTTTTCTACGAGTGTAGAGCATACCTTTTTGAGCTCGATCATCTCCCGCCCTTATGGACT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
AAGCGGCCGGACGGAGGACGGGCATGTTGGTTTCTAAAACTCTAAATCAAGTCATCGGAAATTGTGTGCGTGCAAAGTTA
GCTCAAAGAAGCAGACTAGCAAGCAGCTTGACTGATTGCTGTATCAATAGCACACACGATTAACATCATAAACTTTGCAT
ACGTGCACGTGGCCTGGGCTGGCTAAGCTTGCTCTCTAGCGAGGCTATGGACCTCATAGATCCGGTTCACGCTAGTACAG
GCCAGTTTCACGTGTACGTGTGTTTGTACGTGTGCATCAGGTATAAAAACGGCTCTGCTTTCGTCTGCCACCTTCCACGA
CCATGTAAATAACGGCTTCTTTGGTCATTTGA
>chr2D_979
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AAACAAACGCTTGAATTCGTGACGTTTTCC-TCTGTCATCCGGCCGTTGGATTTTTCGCCGC
ACATCCAAATCCCTCCCCGGCTCCGCCGCCGTCACGCTCGCGCTCTCACCCGGCGGCGCCATGCTCCTCGCCAATCTCCT
CCAGCCGCCGCGCTGCCCGCTCGCCTCCCCCATCCGCTGCCAGGCCCCGGCCCAGCACCACCAGCCCGCCGCCTCCTCCT
CCCGCGGCCTCCTCCTCCGCGGCGCGGGCTCCCCCGTCGTCAAGCGCCTGCCCGCCGGCGACTGGCTCCTCTGGTACCAC
TCCGGGGCGCGCGTCGCGCTCGCCACCTCCCCCGACGGCCTGCGCTGGAGCGCGCCCGTGGCGCCCGACCCGCTGCTGCC
CTCCACCGACTGGTGGGTCTTCGACACCGCCGCCGTCCGCCCCGGCGACGTCCTCGTCATCTCCGGCCCCGACGCGCCGT
CGTCGCCGTCCCGCCGCCCCCCGCCCTCCTCC---TCCGCCGTGTACTGGCTCTACTACACCGGCTCCAACGACGCGCGC
CTCGCGGCGTCCCCGTTCCCCGCCGCGGACGTCGCCGCGCTGCCCGGCCTCGCCATCAGCCAGGACGGCCGCCACTGGGC
GCGCATCGAGGGGGCCCACCACACCGGCGCGCTCCTCGGGGTCGGGGAGGACCACCCGCAGGGCTGGGAGAAGCGCTGCG
CCGCGGCCCCCAAGGTGGTGATGCACGCCGACGGGGACCTCCGGATGTACTACCACTCGTTCGACGAAATGTCGCAGAGG
CACGCGGTCGGGGTGGCCAGGTCCAGGGACGGCATCCGGTGGGAGAGGGTGGGGAAGGCGCTCGAGGGAGGTGGGCCCGG
GTCGTTCGACGAAGGCGGGGTGCGGCAGGGGCATGTCGTCCGTGACCGCGCCGCCGGTCGGTACATGATGGCGTACGAGG
GTTTGGATGGCAATGGCGGGGTGAGCATTGGGTTGGCTGTGTCGGAGGACGGGCTGAGAGGGTGGAGGCGGTGCAGTGAA
TCACCAGCGCTGTGCTCGTCAGAGGATGATGACGAGTGGGACGTCGCTGGGGTCGGCGCCCCGTGCCTGGTGCAAATGGA
TGGGCCATATGATTGGAGACTCTATTACATGGGCGTAGGGAAGGATGGTGAGGCTGCTATTGGGATGGCATATTCAGAGG
GTCAGGGTCTTCCGAGGTTCAACAGGTGTGATGCTCTTCTCATGTAAGGTGAGCTGTGTTGTGTATGTTTCAGGGAATGT
ACTTTGATGAGGAGCTTCTGCATGGCTCATTTTTGACAATGCTGATCAAGTTATCATGATAAAATTTGATGTTAGTTTTA
CTTAGCGTCTTGATTCATCCTGCTTCGGTGCTTCGTAACACCAATGCATTTGCACTGCTCTCAGTTTCCCAACATTGCTA
TCCCCCACATCCGTGATCCGCCAGAGCATGTCAGAGAAGCAATGGTGTTTGGCAAAATGGTAA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------
>chr2B_982
CAAACAGGCTG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TGAATTTCGTGATGTTTCTTTCTGTCATCCGGCCGTTGGATATTTCGCCGC
ACATCCAAA------------TCCGCCGCCGTCACGCTCGCGCTCTCACCCGGCGGCGCCATGCTCCTCGCCAACCTCCT
CCCGCCGCCGCGCTGCCCGCTGGCCTCCCGCACCCGCTGCCAGGCCCCGGCCCGCCACCACCAGCCCGCCGCCTCCTCCT
CCCGCGGCCTCCTCCTCCGCGGCGCGGGCTCCCCCGTCGTCAAGCGCCTGCCCGCCGGCGACTGGCTCCTCTGGTACCAC
TCCGACACGCGCATCTCCCTCGCCACCTCCCCCGACGGCCTGCGCTGGAGCGCGCCCGTGGCGCCCGACCCGCTGCTGCC
CTCCGCCGACTGGTGGGTCTTCGACACCGCCGCCGTCCGCCCGGGCGACGTGCTCGTCATCTCCGGCCCCGACGCGCCGG
CGT---CGTCCCGCCGCCCCCCGCCCTCCTCCTCCTCCGCCGTGTACTGGCTCTACTACACCGGCTCCAACGACGCGCGC
CTCGCGTCGTCCCCGTTCCCCGCCGCGGACGTCGCCGCGCTGCCCGGCCTCGCCATCAGCCAGGACGGCCGCCACTGGGC
GCGCATCGAGGGGGCCCACCACACCGGCGCGCTGCTCGGGGTCGGGGAGGACCACCCCCAGGGCTGGGAGAAGCGCTGCG
CGGCGGCCCCCAAGGTGGTGATGCACGCCGACGGGGACCTCCGGATGTACTACCACTCGTTCGACGAAATGTCCCAGAGG
CACGCGGTCGGGGTGGCCAGGTCCAGGGACGGCATCCGGTGGGAGAGGGTGGGGAAGGTGCTCGAGGGAGGCGGGCCTGG
ATCGTTCGATGAAGGCGGTGTGCGGCAGGGGCATGTCGTCCGTGACCGCGCCGCCGGTCGGTACATGATGGCGTACGAGG
GTTTGGACGGCAATGGCGGGGTGAGCATTGGGTTGGCCGTGTCGGAGGACGGGCTGCGAGGCTGGAGGCGGTGCAGTGAA
TCACCAGCGCTGCGCCCGTCGGAGGATGATGATGAGTGGGACGTCGCTGGGGTCGGCGCCCCGTGCCTGGTGCAAATGGA
TGGGCCGTATGATTGGAGACTCTATTACATGGGCGTAGGGAAGGATGGTGAGGCTGCTATCGGGATGGCATATTCAGAGG
GTCAGGGTCTTCCGAGGTTCAACAAGTGTGATGCTCTTCTCATGTAAGGTGAGCTGTGTTGTGTATGTTTCAGGGAATGT
ACTTTGATGAGGAGCTTCTGCATGGCTCATTT--GACAATGCTGATCAAGTTATCATGATAAAATTTGATGTTAGTTTTA
CTTAGCGTCTTCATTCAACCTGCTTTGGTGCTTTGTAACACCAATGTATTTGCACCTCTTTCAATTTCCTAACATTGCTA
TCCCCCACATCCGTGATCTGTCAGAGCACGTTAGAGAAGCAATGGTGTTTGGCAAAAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>chr2D_2441
AGTATA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------GAAATAATTCCTTATTT
AACACTATTTTAAATGTTGTTTCCCTATTTGACACTGGAAAACTTTTCCTTCCTTATATAACACCAAATCGAAATTTTAT
TCCCTTTGTGACACTTTCATCCATTTTGAGTACTAGCGGTGTTAATTGGCATGTGAAAAGACGATTTT-ACCCCTAGTGC
ATTGTTCATAGGAATAAAAAGGCAATATATATTTTTGGTGG--TTACATGAACAATTAAG-TTCAGTGCGCCATGACACC
GTCGGGTATTTCAGGTCCATGGAGAAACAGTATA--C--GTGCAGATGCTGAGGTACTTATAGGACAATAGACAAACCCT
TTTTTT--CTGCGAGTGTAGAACATACC-TTTTGAGCTCGATCATCTCCTGCCCTTATGGACTAATGTGCTGGTCACTTG
GTGCGTGCATGCGCATTTGCATCT------TTGCAAGACACCAATATGTTGGTAGTATGTAGGTTGGTTGACTTGTTTTT
GAACGGCTAATTAACAACAAGAAATGTAATGCACTGACGGCCTGGCTGCACACGCGATGACTAACATCCAACTTAAATTA
TGTTGGCAACTTTGTTTTGTTTACTCGACCGCTAAGCTTCCCGACGTTATGTTTCGATAGCCATTAGTAAGCTTGGTTGG
CCTAATTAGCCCGGTCCCATGTACAGTGTCGATAGTGGCCGGAACCTTAAAGTTGCTGCTGCCACGTACAGAAGGACCGG
AACCGGCCAGACGGAGGACGGGCATGTTGGTTTGTAAAACTCTAAATCAAGTCATCGGAAATTGTGTGCATGCAAAGTTA
GCTCAAAAAAGAAGACTAGCAAGCAGCATGATTGATTCCTGTATCAATAGCGCACACAAGCAACATCATAAACTTTGCAT
ATGTGCACGTGGCCTGGGCTGGCTAAGCTTGCTCTCCAGCGAGACTATTGACCTGATGGATCCGGTTCACGCTAGTACAG
GCTAGTTTCCTGTGTACGTGT------------GCATCACGGGTAAAGCCGGTTCTACTTTTGTCCGCCACCTTCCACGA
CCATGTAAATAACGACTTCTTTGGTCATTTGA
>chr4D_2441
AGTATA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------GAAAGAATTCCTTATTT
AACACTATTTTAAATGTTGTTTCCCTATTTGACACTGGAAAACTTTTCCTTCCTTATATAACACCAAATCGAAATTTTGT
TCCCTTTGTGAAACTTTCATCCATTTTGAGTACTAACGGTGTTAATTGACATGTGAAAAGACGATTTT-ACCCCTAGTGC
ATTGTTCACAGGAATAAAAAGGCAATATATATTTTTGCTGG--TTACATGAACAATGAAGTTTCAGGACGCCATGACACC
GTCGGGTATTTCAGGTCCATGGAGAAACATTATA--C--GTGCAGATGCTAAGGTACTTATAGGACAATAGACAAACCCT
TTTTT---CTGCGAGTGTAGAGAATTCC-TTTTGAGCTCGATCATCTCCTGCCCTTATGGACTGATGTGCTGGTCACTTG
GTGCGTGCAGGCGCCTCTGCATCT------TTGCAAGACACCAATATGTTGGTAGTATGTAGGTTGGTTGACTTGTTTTT
GAACGGCTAACTAACAACAAGAAATGCAATGCACTGACGGCCTGACTGCACACGCGATGACTAACATCCAACTTAAATTA
TGTTGGAAACTTTGTTTTGTTTACTCGACCGCTAAGCTGCCCAGCGTTACATTTCGATAGCCATTAGTAAGCTTGGTTGG
CCTAATTAGCCCGGTCCCATGTACAATGTCGATAGTGGTCGGAACCTTAAAGTTGCTGCTGCCACGTACAGAAGGACCGG
AACTGGCCGGCCGGACGACGGGCATGTTGGTTTGTAAAACTCTAAATCAAGTCACCGGAAATTGTGTGCATGTAAAGTTA
GCTCAAAGAAGCAGACTAGAAAGCAGCTTGATTGATTCCTGTATCAATAGCGCACACAAGCAACATCATAAACTTTGCAT
ACGTGCATGTTTCCTGGGCTGGCTAAGCTTGCTCTCTAGCGAGACTATTGACTTAATGGATCCGGTTCACGCAAGTACAG
GC------------------------------------------------------------------------------
--------------------------------
>chr6D_2443
--------------------------------------------------------------------------------
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------------------------------------------------------------TAAGAAAGAATTCCTTATAT
AGCACTATTTTAAATGTTGTTTCCCTATTTGACACTGGAAATTTTTTCCTTCTTTATATAACACCAAATCTAAATTTTGT
TCCCTTTGTGACACTTTCATCCATTTTAAGTACTAACGGTGTTAATTGACATGTGAAAAGACGATTTTTACCCCTAGTGC
ATTATTCACAGGAATAAAAAGGCAATATATACTTTTTGTGG--TTACATGAACAATGAAGTTTCAGTGCGCCATGACACC
GTCGGATATTTCAGCTACATGGAGAAAGAGTATA--T--GTGCAGATGCTGAGGTAG-TATAGGACAATAGACAAACCCT
TTTTTT--CTACGAGTGTAGAGCATACC-TTTTGAGCTCTATCATCTCCTGCCCTTATGGACTGATGTGCTGGTCGCTTG
GTGCATGCAGGCGCCTCTGCATCT------TTGCAAGACACCAATATA-----------TAGGTTGGTTGACTTGTTTTT
GAACGGCTAATTAACAACAAGAAATGTACTGCATTGACTGCCTGATTGCACACGCGAAAACTAACATCCAGCTTAAATTA
TGTTGGCAACTTTGTTTTGTTTACTCGACCACTAAGCTGCCCGGCGTCACGTTTCGATAGCCATTATTAAGCTTGGTTGG
CCTAATTAGCCCGGTCCCATGTACAATGCCGATAGTGGCCGGAACCGTATAGTTGCTGCCGCCACGTACAGAAGGACAGG
AACCGGCCGGACGGAGGACGGGCATGTTGGTTTCTAAAACTCTAAATCAAGTCATTGGAAATTGTGTGCGTGCAAAGTTA
GCTCAAAGAAGCAGACTAGCAAGCAGCTTGACTGATTTCTGTATCAATAGCACACACAAGCAACATCATAAACTTTGCAT
ACGTGCACGTAGCCTGGGCTGGCTAAGCTTGCTCTCTAGCGAGGCTATCGACCTCATGGATCCGGTTCATGC-AGTACAT
GCCAGTTTCACATGTACGTGTGTTTGTACGTGTGCATCAGGTATAAAAACGTCTCTGCTTTTGTCCGCCACCTTCCACGA
CCATGTAAATAACGGCTTCTTTGGTCATTTGA
>chr6A_2445
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------AGAAAGAATTCCTTATAT
AGCACTATTTTAAATGTTGTTTCCCTATTTGACACTGAAAAACTTTTCCTTCCTTATATAACACCAAATCTAAATTTTGT
TCCCTTTGTGACACTTTTATCCATTTTGAGCACTAATGGTGTTAATTGACATGTGAAAAGACGA-TTTTACCCCTAGTGC
ATCATTCACGGGAATAAAAAGGCAATATATATTTTTTGTGG--TTACATGAACAATGAAGTTTCAGTGCGCCATGACACC
GTCGGGTATTTCAGGTACATGGAGAAACAGTATA--T--GTGCACATGCTGAGGTAC-TATAGGACAATAGACAAACCCT
TTTTTT--CTACGAGTGTAGAGCATACC-TTTT--------------------------GACTGATGTGCTGGTCGCTTG
GTGCATGCAGGCGCCTCTACATCT------TTGCAAGACACCAATATG-----------TAGGTTAGTTGACTTGTTTTT
GAACGGCTAATTAACAACAAGAAATGTACTGCACTGACGGCCTGATTGCACACGCGAAAACTAACATCCAGCTTAAATTA
TTTTGGCAACTTTGTTTTGTTTACTCGACCACTAAGCTGCCCGGCGTCACGTTTCGATAGCCATTATTAAGCTTGGTTAG
CCTAATTAGCCCGGTCCCATGTACAATGCCGATTGTGGCCGGAACCGTATAGTTGCTGCCGCCACGTACAGAAGGACAGG
AACCGGCCGGACGGTGGACGGGCATGTTGGTTTCTAAAACTCTAAATCAAGTCATCGGAAATT----------------A
GCTCAAAGATGCAGACTAGCAAGCAGCTTGACTGATTTCTGTATCAATAGCACACACAAGCAACATCATAAACTTTGCAT
ACGTGCACGTGGCCTGGACTGGTTAAGCTTGCTCTCTAGCGAGGCTATCGACCTCATGGATCCGGTTCACGCTAGTACAG
GCCAGTTTCACGTGTACGTGTGTTTGTACGTGTGCATCAGGTATAAAAACGGCTCTGCTTTTGTCTGCCACCTTCCACGA
CCATGTAAATAACGGCTTCTTTGGTCATTTGA
>chr4A_2446
--------------------------------------------------------------------------------
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---------------------------------------------------------------GAAAGAATTCCTTATAT
AGAACTATTTTAAATGTCGTTTCCTTATTTGACACTGAAAAACTTTTCCTTCCTTATATAACACCAAATCTAAATTTTGT
TCCCTTCATGACACTTCCATCCATTTTAAGTACTAACGGTGTTAATTGACATGTGAAAAGATGA-TTTTACCCCTATTGC
ATTATTCACAGGAATAAAAAGGCAATACAAATTTTTGTGGTTATTACATGAACAATGAAGTTTCAGTGCGCCATGACACC
ATCCAGTATTTCAGGTACATGGAGAAACAGTATA--TACGTGCAGATGCTGAGGTAC-TATAGGACAATAGACAAACCCT
TTTTT---CTATGAGTGTAGAGCATACC-TTTTGAGGTCGATCATCTCCTGCCCTTATGGACTGATATGCTGGTTGCTTG
GTGCATGCAGGCGCCTCTGCATCTTTGCAATTGCAAGACACCAATATG-----------TAGGTTGGTTGACTTGTTTTT
GAACGGCTAATTAACAACAAGAAATGTACTACACTGATGCCCTGATTGCACACGCGAATGCTAACATCTAGCTTAAATTA
TGTTGGCAACTTTGTTTTGTTTACTTGACCACGAAGCTGCCCAGCGTCACATTTTGATAGCCATTATTAAGCTTGGTTGG
CCTAATTAGCCCGGTCCCATGTACAATGCCGGTAGTGGACGGAACCATATAGTTGCTGCCGCCACGTACAGAAGGACAGG
AACTGGCCGGACGGAGGACAGGCATGTTGGTTTCTAAAACTCTATATCAAGTCATCAGAAATTGTGTGCGTGCAAAGTTA
GCTCAAAGAAGCAGACTAGCAAGAAGCTTGACTGATTTCTATATCAACAGCACAAAGAAGCAACATCATAAACTTTGCAT
ACGTGCACGTGGTCTGGGCTGGCTAAGCTTGCTCTCTAGCGAGGCTATCGACCTCATGGATCCGGTTCACGCTAGTACAT
GCTAGTTTCATGTGTATGTGTGTTTATATGTGTGCATCAGGTATAAAAACGGCTCTACTTTTGTCTGCCACCTTCCACGA
CCATGTAAATAACGACTTCTTTGGTGGTTTGA
>SNPs
----S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------------------------------------------------------------S-
---------------------------S-----------S-SSSSSSSS-------------------------------
-------S----------S-----------SS---------------------------------------S--------
-------------------------S------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
------------------S---------------S---------------------------------------------
--------------------------------------------------------------------S-----------
--------------S---------------------S--------------------------S----------------
----S-----------------------------------------------------------S---------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-------------------------------S----------------------------S-S-----------------
-SS------S---S-------------------------------------S---------------------S------
---------------------------------------------------S----S-----------------------
-----------------------------------S----------------------S---------------------
------------------------------S-----------------------S-------------------------
S----------------------------------------------------S-------------------S------
-------S------------------S-S------S--------------------------------------------
----------------------------S-----SS--------S-----------------------------------
------SS--------------------S--------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-------------------------------------S-------------------S-SS-------------------
------------------------------------------------S--------S----------------------
-------------------------------------------------------------S------------------
--------------------------------
>forward_684
--------------------------------------------------------------------------------
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------------------------ACCACGATGCAAACAAGTGC------------------------------------
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--------------------------------
>reverse_2250
--------------------------------------------------------------------------------
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---------CGGAACTTCTGCATGGCTCA---------------------------------------------------
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--------------------------------
