>input_sequence_58006
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ATGGAGACCGAGACTGTGGTTGAAACACTGCTGGAGCTGCCGTTGGATGTATTGATGGATATCTTTTCCCTCCTGGAGCT
TCCTGACCTCATTCGTGCAAGCTCCGTGTGCTCCTTCTGGCGCTCTGCTTATAGTAGTCTACATAGCCAGCTTGGGCAAT
ATAAACGGCCCCAGACACCTTGCCTCCTCTACGCCTCCGAAGCCGATGGTGAGAACGTAGCTTCTCTCTACAGTCTTGCT
GAAAAGAGGGTCTACAAGCTAACTCTTCCGGATCCACCTATCCGTACTAGGCATCTCATTGGGTCCTCTAATGGCTGGTT
AGTTACTGCTGATGAGAAGTCTGAGCTTCACCTTTTCAATCCGATCACTGGTCAACAGATTGCCCTCCCCTCGGCGATCA
CCATTGAGCAAATAGAGCCGATCTTAGATAGTGCTGGTGCAGTTAATAAGATTAAGATGTGGGATCTAGCGCCGAACGAT
GATCCGAATGAGTTTTCTGACTGCCTCTACATCAGGGCATTTGTGTTTCCTGATCCACCCACGGGAAGCTATATTGTGGT
TATCATCCACAATCCAGAGAAATATATTTCGTTTGCAAGGGTAGGTGATTATAAATGGACCTCGCTGCCGGGTAAGAACT
ATAAACAATGCATCCACATGGATGGTCTATTGTATGCATTCGCAGAAACTGGAGGAGTCTATGCTTTTGATCTCACCGGT
CCTACCATCATGAGTTATATTATTGCAGATGAGATGGAGAATTACATTAGTGGGACGGACGGGGACATGTACGTTGTTCA
GGCTCCATGGGGTGATCTGTTGCAAGTTTGCAGGAAATCTGATGTCACA---GAAGAGCTGCTCGTACAGACTGAGAAAG
TATTGTTATATAAAGCTGATATGGCAGCAAAAAAACTTGTGGAAGTAAATGGCTTGCATGATCATGTGTTGTTTCTTGGG
CGTAGTCAGTCGCAATGCCTTAGTGCGGAAGCTTATCCACAATTGAAGAAAAACTGTGTTTATTTCACAGATGACGAGAT
ATATGTTTCGCACTATAAGAATAATCGCCGGGATATAGGTATTCTCAACTTGGGAAATGACAGTACGGAAGAAATTGTAT
CTCAGCTTTGGTGCAATTGGCCAAATCCCATATGGATAACACCAAATCTCACGAGCATGAATG----------CAAATAG
CTAA----------------------------------------------------------------------------
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--------------------------------------
>chr1B_1_TraesCS1B01G109900
GCCCAGCACCGAAGCAGCTCCGACACCGCCAAGCTCGCGCACGCCGACTCCGCCAACGCCTGGAGCCGACCCCGCCGAGT
GAAACGCGAACTTGCGGCGGCGGCGCTCTGTTTTTTGTAACGCCAGACTACGTCCGATCGCCGGATTTGCGGCGTTTTTT
AAGAACGGGAACGACCAAGTTTGAATTTCCCGCATCCTGGGGCCGGCGCGTGGGGGCGTGACTGGGAGCTAGGTCGCCCC
CAGGGGCCAAACTAGCGCCGGCACGCCCCCAGGCCGCTCTATTTAGGCGCCCTGGGGCCGAACGGCTGGAGCTGCCCTTA
CCGCGCGAGCGCCATCGGACGGAAGG----------------------ATAGATTTTCCCAACACAATTACCTCGATACA
GCCAGCGGCGCATCTCGCCGCCGAAGAAGTCCGCAGTTCATCAACGCAGTCCGCAGTTCCATCTCTCTGCCACCTCCCAC
CCGCCTTCGCCTTGTGCGCTATCGAGCTGCTACACTTCGGCACTTCCTCTGGTTTGT------TCCTTCTCTCTTTCCTG
TCGTCGTGGGAACGGGATTGGGATTCGTCTGAGCCGCGTAGTCCGATTCCAGGTCCAAATCTTT---T-TTTTTCCCGTA
GTCTCCAGTCCAAATTTCCCGTA-------GTCGTTCTTGGATTCGGACTCATTTCCTACTCGAATTAGAGCTGAGCTCA
GGCCTCCGTAGGTGGGTTGAGCTTCCTATTATATATACAAGTGCTGCCTGCCCC-TGTTCCTGCTAGGTTGAACTAAAGC
TGTGCGGTTGATAGCTGCGGAAGCGATTCATCATTCAGAAGATCAGATTTTGCAATTTCCCCAATGGGGACGTGTAGCTT
AGTGAGGATGATGAGCTTACTGCAGCTAGACTTGAGAATGTTGCGTATGCTGCTGGCCCTTTCTCCCCCTCCCAGTTCAC
ACTGGAAATTCAGAAAACACCCGCCATTGATGCTGATGGAGACCGAGACCGTGGTGGAAATATTGCCGGAGACGCCGCTG
ATGGAGACCGAGACTGTGGTTGAAACACTGCTGGAGCTGCCGTTGGATGTATTGATGGATATCTTTTCCCTCCTGGAGCT
TCCTGACCTCATTCGTGCAAGCTCCGTGTGCTCCTTCTGGCGCTCTGCTTATAGTAGTCTACATAGCCAGCTTGGGCAAT
ATAAACGGCCCCAGACACCTTGCCTCCTCTACGCCTCCGAAGCCGATGGTGAGAACGTAGCTTCTCTCTACAGTCTTGCT
GAAAAGAGGGTCTACAAGCTAACTCTTCCGGATCCACCTATCCGTACTAGGCATCTCATTGGGTCCTCTAATGGCTGGTT
AGTTACTGCTGATGAGAAGTCTGAGCTTCACCTTTTCAATCCGATCACTGGTCAACAGATTGCCCTCCCCTCGGCGATCA
CCATTGAGCAAATAGAGCCGATCTTAGATAGTGCTGGTGCAGTTAATAAGATTAAGATGTGGGATCTAGCGCCGAACGAT
GATCCGAATGAGTTTTCTGACTGCCTCTACATCAGGGCATTTGTGTTTCCTGATCCACCCACGGGAAGCTATATTGTGGT
TATCATCCACAATCCAGAGAAATATATTTCGTTTGCAAGGGTAGGTGATTATAAATGGACCTCGCTGCCGGGTAAGAACT
ATAAACAATGCATCCACATGGATGGTCTATTGTATGCATTCGCAGAAACTGGAGGAGTCTATGCTTTTGATCTCACCGGT
CCTACCATCATGAGTTATATTATTGCAGATGAGATGGAGAATTACATTAGTGGGACGGACGGGGACATGTACGTTGTTCA
GGCTCCATGGGGTGATCTGTTGCAAGTTTGCAGGAAATCTGATGTCACA---GAAGAGCTGCTCGTACAGACTGAGAAAG
TATTGTTATATAAAGCTGATATGGCAGCAAAAAAACTTGTGGAAGTAAATGGCTTGCATGATCATGTGTTGTTTCTTGGG
CGTAGTCAGTCGCAATGCCTTAGTGCGGAAGCTTATCCACAATTGAAGAAAAACTGTGTTTATTTCACAGATGACGAGAT
ATATGTTTCGCACTATAAGAATAATCGCCGGGATATAGGTATTCTCAACTTGGGAAATGACAGTACGGAAGAAATTGTAT
CTCAGCTTTGGTGCAATTGGCCAAATCCCATATGGATAACACCAAATCTCACGAGCATGAATG----------CAAATAG
CTAACATATTGTGTATATGTACGTAGGTAGCTTCTCGAATGCTATTAGAAACTGTCCCA--------TAAGGCCGTGCTA
ATCAAAATTCCCAAATTTGTGGGCAAATGCTATGAATACGGAGGCATGTTCCGT----ATCTGTTCTTCACCTTGTGTGC
TATATTTTAAATGGCTTTTATATTCTGAACTGTTAGGTTGATCTCTCCTGTGTGGGCCCAAC---GGCCCACCGGACCCC
T-GATCCGCGCCCTAATCGGGGGCGCCCAACCGCAATATGGTTGACGGGCCCCTGCCACGCAGCGCTACATAAAGAGGTG
GGGGCCGGCGGCACGCAGTACGAGGTTCACCGCGTTGCCAGGCTCCCCACCGAAAACCCCGACCCGATCTAGGT-CTAGC
GCTAACAGTGACGGGAAGCTCCGCCGCCGCCACTGCCCA-CACACCGCCGCCATCCACTCCCTGCCATCACC--GGCCAC
CGTCACCATGGCCGACACCGGGAGTTCCTCATCTGCACCTGGAGAAGGTAGGTTCACCGGATG-ATCTAGCCTACTCCGA
TCCGAAGG--ATCTAACAATGGTATCAGGCCATCTT----GGTTAGATGATTTTCTGTAAAAAGAAAACAAAGAAAGGAA
AAGGAT-CCCCAACCCGCAAAGAACCCTAGCAGGGC--------------ACAGAGAAAAGCAAACAAAAA-AAGGAT--
---------CCCCAAAAGTTCACCGGACTAGGGCCTCGGGCCTCGCCGGCAAAGAGCGCCGCCGCAAGG-CCGCGCC-GT
TCCTCTCGATCCGGACGCGCATCGGCAAGCCGAGGCGT-C-GGATGAAGAAC-TACCCCACACGGGGCAAAGGG--C---
------ATCGCGAACAAACCGCTCGACGGCGGCGCGATCGCCGCA-AGGTGGACGCGCA-GCCGACGAGGGGGATGACCA
CGACGCCGCAGTAAAGTGCTCTGCCGTCGTCGAACACGAATGGG-GCAGAAGGGGCAAAGAAGCCTCGTCCTCTCTGTCA
CGGTAGGAGGAGATGGAACGGGGAA-AGGGAGAAGCTC
>chr1B_316
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------CCTTA
CCGCGCGAGCGCCATCGGA------------------ACGCGCGCAGGATAGATTTTCCCAACAAAATTGCCTCGATACA
GCCAGCGGCGCATCTCGCCGCCGAAGAAGT--------------------CCGCAGTTCCATCTCTCTGCCACCTCCCAC
CCGCCT-CGCCTTGTGCGCTATCGAGCTGCTACACTTCGGCACTTCCTCTGGTTTGT------TCCTTCTCTCTTTCCTG
TCGTCGCGGGAACGGGATTGGGATCCGTCTGAGCCGCGTAGTCCGATTCCAGGTCCAAATCTTT---TTTTTTTCCCGTA
CTCTCCAATCCAAATTTCGCGGCACTACCTGTCGTTCTTGGATTCGGACTCATCTCCTACTCGAATTAGAGCTGAGCTGA
GGCCTCGGTAGGTGGGTTGAGCTTCCTGTTATATATACAAGTGCTGCCTGCCCC-TGTTCCTGCTAGGTTGAACTAAAGC
TGTGCGGTTGATAGCTGCGGAAGCGATTCATCATTCAGAAGATCCGATTTTGCAATTTCTCCAATGGGGACGTGTAGCTT
AGTGAGGATGATGAGCTTACTGCAGCTAGACTTGAGAATGTTGCGTATGCTGCTGGCCCTTTCTCCCCCTCCCAGTTCAC
ACTGGAAATTCAGAAAACACCCGCCATTGATGCTGATGGAGACCGAGACCGTGGTGGAAATATTGCCGGAGACGCCGCTG
ATGGAGACCGAGACTGTGGTTGAAACACTGCTGGAGCTGCCGTTGGATGTATTGATGGATATCTTTTCCCTCCTGGAGCT
TCCTGACCTCATTCGTGCAAGCTCCGTGTGCTCCTTCTGGCGCTCTGCTTATAGTAGTCTACATAGCCAGCTTGGGCAAT
ATAAACGGCCCCAGACACCTTGCCTCCTCTACGCCTCCGAAGCCGATGGTGAGAACGTAGCTTCTCTCTACAGTCTTGCT
GAAAAGAGGGTCTACAAGCTAACTCTTCCGGATCCACCTATCCGTACTAGGCATCTCATTGGGTCCTCTAATGGCTGGTT
AGTTACTGCTGATGAGAAGTCTGAGCTTCACCTTCTCAATCCGATCACTGGTCAACAGACTGCCCTCCCCTCGGCGATCA
CCATTGAGCAAATAGAGCCGATCTTAGATAGTGCCGGTGCAGTTAATAAGATTAAGATGTGGGATCTAGCGCGGAACGAT
GATCCAAATGAGTTTTCTGACTGCCTCTACATCAGGGCATTTGTGTTTCCTGATCCACCCACGGGAAGCTACATTGTGGT
TATCATCCACAGTCCAGATCGATATCTTTCCTTTGCAAGGGTAGGTGATTTTAAATGGACCTCGCTGCCGGGTGAGAACT
ATAAACAATGCATCCACATGGATGGTCTATTGTATGCATTCACAGAAACTGGAGGAGTCTATACTTTTGATCTGACCTGT
CCTGCCATCACAAGGAATATTATTGTAGATGAGTTGCAGAATTACAA------GACGGTTGGGTACACGTATGTTGTTCA
GGCTCCATGGGGTGATCTGTTGCAAATTTGCAGAGCAATAGATGTCGCACCTGAAGG---GTTCATAAAGACCAAGAAAA
TACTATTTTATAAAGTTGATGTGGCAGCAAAAGAACTTGTGGAAATGAATGGCTTGCATGATCATGTGCTGTTTCTTGGG
CGTAGTCAGTCGCAATGCCTTAGTACTGAGGAATATCCACAACTGAAGCCAAATCGTGTTTATTTCACAGACGACATAAC
ATATATTTCGAAGTATAAGAATGATGACCGGGATATAGGTATTCTCAACTTGGAAAATGACAGTAGGGAAGA---TGTAC
CTAAGCTTTGGTGCAATTGGCCAAATCCCATATGGATGACACCCAACATCACAAGGATTAACATGGCTTTGGATAAATAG
TGTACTTATTAAAATTTT----GTATTTCGCTTCTCAGATGCTATTAGAAGCTGTCCAA--------TAGGGTTTTTTGG
ACCAATTTTCCAAATTTTATGGGCAAATGCTATGAAAACGGAGGCATGTTCCGTTTATATGTTTTCA-------------
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--------------------------------------
>chr1B_316
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CCTTA
CCGCGCGAGCGCCATCGGACGGAAGGCAGCTGTCGGAACGTGCGCAGGATAGATTTTCCCCACACAATTACCTCGATACA
GCCAGCGGCGCATCTCGCCGCCGAAGAAGTCCGCAGTTCATCAACGCAGTCCGCAGTTCCATCTCTCTGCCACCTCCCAC
CCGCCTTCGCCTTGTGCGCTATCGAGCTGCTACACTTCGGCACTTCCTCTGGTTTGT------TCCTTCTCTCTTTCCTG
TCGTCGCGGGAACGGGATTGGGATCCGTCTGAGCCGCGTAGTCCGATTCCAGGTCCAAATCTTTC-TTTTTTTTCCCGTA
GTCTCCAGTCCAAATTTCGCGGGACTACTTGTCGTTCTTGGATTCGGACTCATTTCCTACTCGAATTAGAGCTGAGCTGA
GGCCTCGGTAGGTGGGTTGAGCTTCCTATTATATATACAAGTGCTGCCTGCCCC-TGTTCCTGCTAGGTTGAACTAAAGC
TGTGCGGTTGATAGCTGCGGAAGCGATTCATCATTCAGAAGATCCGATTTTGCAATTTCCCCAATGGGGACGTGTAGCTT
AGTGAGGATGATGAGCTTACTGCAGCTAGACTTGAGAATGTTGCGTATGCTGCTGGCCCTTTCTCCCCCTCCCAGTTCAC
ACTGGAAATTCAGAAAACACCCGCCATTGATGCTGATGGAGACCGAGACCGTGGTGGAAATATTGCCAGAGCCGCCGCTG
ATGGAGACCGAGACTGTGGTTGAAACACTGCTGGAGCTGCCGCTGGATGTATTGATGGATATCTTTTCCCACCTGGAGCT
TCCTGACCTCATTCGTGCGAGCTCCGTGTGCTCCTTCTGGCGCTCTGCGTATAGTAGTCTACATAGCCAGCTTGGGCAAT
ATAAACGGCCCCAGACACCTTGCCTCCTCTACGCCTCCGAAGCCGATGGTGAGAACGTAGCTTGTCTCTACAGTCTTGCA
GAAAAGAGGGTCTACAAGCTAACTCTTCCGGATCCACCTATCCGCAGTAGGCATCTCATTGGGTCCTCTAATGGCTGGTT
AGTTACTGCTGATGAGAAGTCTGAGCTTCACCTTCTCAATCCGATCACTGGTCAACAGATTGCCCTCCCCTCGGCGATCA
CCATTGAGCAAATAGAGCCGATCTTAGATAGTGCCGGTGCAGTTAATAAGATTAAGATGTGGGATCTAGCGCCGAACGAT
GATCCAAATGAGTTTTCTGACTGCCTCTACATCAGGGCATTTGTGTTTCCTGATCCACCCATGGGAAGCTACATTGTGGT
TATCATCCACAGTCCAGAGCAATATCTTTCGTTTTCAAGGGTAGGTGATTATAAATGGACCTCGCTGCCGGGCGAGAACT
ATGAACAATGCATCCACATGGATGGTCTATTGTATGCATTCACAGAAAACGGAGGAGTTTACACTTTTGATCTGACCGGT
CCTACCTTCACAAGGAATATTATTGCAGACGAGTTGCAGAATTACAA------GACGGATGGGTACACGTACTTTGTTCA
GGCTCCATGGGGTGATCTGTTGCAAGTTTGCAGAACATTAGATTTCACACCCGAAGT---GTTCATAAAGACCAAGAAAA
TACTATTTTATAAAGTTGATGTGGCAGCAAAAGAACTTGTGGAAATGAATGGCTTGCATGATCATGTGCTGTTTCTTGGG
CGTAGTCAGTCGCAATGCCTTAGTACCGAGGAATATCCACAACTGAAGCCAAATCGTGTTTATTTCACGGACGACATGAC
ATATATTTTGAAGTATAAGAATAATGACCGGGATATAGGTATTCTCAACTTGGAAAATGACAATAGGGAAGA---TGTAC
CTAAGCTTTGGTGCAATTGGCCAAATCCCATATGGATGACACCCAACCTCACAAGGATTAACATGGCTTTGGACAAATAG
TGAGTTTATTACAATTTT----GTAGTTAGCTTCTCGGATGCTATTAGAAACTGTCCAA--------TAGAGCTTTTTGG
ACCAAATTTCCAAATTTTATGGGCAAATGCTATGAAAACGGAGGCATGTTCCGTTTATATTTTCTTCATACCTGGTTTGC
TATATTTTAAATGGCTTTTATTTTCCGAATTGT-----------------------------------------------
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>chr1D_316
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CCTTA
CCGCGCGAGCGCCATCGGACGGAAGACAGCAGTGGGAACGCGCGCAGGGTAGATTTTCCCAAGAAAATTATCTCGATACA
GCCAGCGGCGCATCTCGCCGCCGACGAAGTCCCCAG---------------------TCCACCTCGCCACCACCTCCCAC
CCGCCT-C-----GTGCCCTATCGTGCTGCTACACTA---CATTTCCTCTGGTTTGTTCCTCTTCCTTCTCTCTTTCCTG
TCGTCGCGGGAACGGGATTGGGATCCGTCTGAGCCGCGTAGTCCGATTCCAAGTCCAAATATTT---TTT-----CCGTA
GTCCCCACTCCAAAATTTCC----------GTCGTTCTTGGATTCGGACTCATCTCCTACTCGAATTAGAGCTGAGCTGG
GGCCTCGGTAGGTGGGTTGAGCTTCCTATTATATATACAAGTGCTGCCTGCCCC-TGCTCCTGCTAGGTTGAACTAAAGC
TGTGCGGTTGATAGCTGCGGAAGCGATTCATCGTTCAGAAGATCCGATTTTGCAATTTCTCCAATGGGGACGTGTAGCTT
AGTGAGGATGATGAGCTTATTGCAGCTAGACTTGAGAATTTTGCGTACGCTACTGGCTCTTTCCCCCCCTCCCAGTTCAC
ATTGGAAATTCAGAAAACACCCGCCATTGATGCTGATGGAGACCGAGACCGTGGTGGAAATATTGCCGGAGCCGCCGCTG
ATGGAGACCGAGACTGTGCTTGAAACACTGCTGGAGCTGCCGCTGGATGTATTGATGGATATCTTTTCCCTCCTGGAGCT
TCCTGACCTCATTCGTGCGAGCTCTGTGTGCTCCTTCTGGCGCTCTGCTTATAGTACTCTACATAACCAGCTTGGGCAAT
ATAAGCGGCCCCAGACACCTTGCCTCCTCTACGCCTCCGAAGCCGATGGTGAGAACGTAGCTTCTCTCTACAGTCTTGCA
GAAAAGAGGGTCTACAAGCTAACTCTTCCGGATCCACCTATCCGTAGTAGGCATCTCATTGGGTCCTCCCATGGCTGGTT
AGTTACTGCTGATGAGAAGTCCGAGCTTCACCTTCTCAATCCGATCACTGGTCAACAGATTGCCCTCCCCTTGGCGATCA
CCATCGAGCAAATAGAGCCGATCTTAGATAGTGCCGGTGCAGTTAATAAGATTAAGATGTGGGATCTAGCGCCGAACGAT
GATCCGAATGAGTTTTCTGACTGCCTCTACATCAGGGCATTTGTGTTTCCTGATCCACCCACGGGAAGCTACATTGTGGT
TATCATCCACAGTCCAGAGCAATATCTTTCGTTTTCAAGGGTAGGTGATTATAAATGGACCTCGCTGCCGGGCGAGAACT
ATGAACAATGCATCCACATGGATGGTCTATTGTATGCATTCACAGAAAACGGAGGAGTTTATACTTTTGATCTGACCGGT
TCTACCTTCACAAGGAATATTATTGCAGACGAGTTGCAGAATTACAA------GACGGATGGGTACACGTACTTTGTTCA
GGCTCCATGGGGTGATCTGTTGCAAGTTTGCAGAGCATTAGATTTCACACCCGAAGT---GTTCATAAAGACTAAGAAAG
TACTATTTTATAAAGTTGATGTGGCAGCAAAAGAACTTGTGGAAATGAATGGCTTGCATGATCATGTGCTGTTTCTTGGG
CGTAGTCAGTCGCAATGCCTTAGTACCGAGGAATATCCACAACTGAAGCCAAATCGTGTTTATTTCACGGACGACATGAC
ATATATTTCGAAGTATAAGAATAATGACCGGGATATAGGTATTCTCAACTTGGAAAATGACAATAGGGAAGA---TGTAC
CTAAGCTTTGGTGCAATTGGCCAAATCCCATATGGATGACACCCAACCTCACAAGGATTAACATGGCTTTGGACAAATAG
TGAGTTTATTACAATTTT----GTAGTTAGCTTCTCGGATGCTATTAGAAACTGTCCAA--------TAGAGCTTTTTGG
ACCAAATTTCCAAATTTTATGGGCAAATGCTATGAAAACGGAGGCATGTTCCGTTTATATGTTTTTCATACCTGGTTTGC
TATATTTTAAATGGCTTTTATTTTCTGAATTGT-----------------------------------------------
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>chr1B_344
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-----------------------AGG----------------------ATAGATTTTCCCCACAC----ATCTCGATACA
GCCAGCGGCGCATCTCGCCGCCGAAGAAGTCCGCAGTTCATCAACGCAGTCCGCAGTTCCATCTCTCTGCCACCTCCCAC
CCGCCTTCGCCTTGTGCGCTATCGAGCTGCTACACTTCGGCAATTCCTCTGGTTTGT------TCCTTCTCTCTTTCCTG
TCGTCGCGGGAACGGGATTGGGATCCGTCTGAGCCGCGTAGTCCGATTCCAGGTCCAAATCTTTATTTTTTTTTCCCGTA
GTCTCCAATTCAAATTTCGCGGCACTACTTGTCGTTCTTGGATTCGGACTCATTTCCTACTCGAATTAGAGCTGAGCTGA
GGCCTCGGTAGGTGGGTTGAGCTTCCTATTATATATACAAGTGCTGCCTGCCCC-TGTTCCTGCTAGGTTGAACTAAAGC
TGTGCGGTTGATAGCTGCGGAAGCGATTCATCATCCAGAAGATCAGATTTTGCAATTTCTCCAATGGGGACGTGTAGCTT
AGTGCGGATGATGAGCTTACTGCAGCTAGACTTGAGAATGTTGCGTATGCTGCTGGCCCTTTCTCCCCCTCCCAGTTCAC
ACTGGAAATTCAGAAAACACCCGCCATTGATGCTGATGGAGACCGAGACCGTGGTGGAAATATTGCCGGAGACGCCGCTG
ATGGAGACCGAGACTGTGGTTGAAACACTGCTGGAGCTGCCGTTGGATGTATTGATGGATATCTTTTCCCTCCTGGAGCT
TCCTGACCTCATTCGTGCGAGCTTTGTGTGCTCCTTCTGGCGCTCTGCTTATAGTAGTCTACATAACCAGCTTGGGCAAT
ATAAGCGGCCCCAGACACCTTGCCTCCTCTACGCCTCCGAAGCTGATGGTGAGAACGGAGCTTGTCTCTACAGTCTTGCA
GAAAAGAGGGTCTACAAGCTAACTCTTCCGGATCCACCTATCCGTAGTAGGCATCTCATTGGGTCCTCCTATGGCTGGTT
AGTTACTGCTGATGAGAAGTCTGAGCTTCACCTTCTCAATCCGATCACTGGTCAACAGATTGTCCTCCCCTCGGTGATCA
CCATTGAGCAAGTAGAGCCGATCTTAGACAGTGCCGGTGCAGTTAATAATTATAAGATGTGGGATTTAGAGCAGGACGAT
GATCCTAATGAGTTTCCTGACTGCCTCTGCATCAGGGCTTTTGTGTTTCCTGATCCACCCACGGGAAGCTACATTGTGGT
TCTCATCCACAATCCAGAGCGATATCTTTCGTTTGCAAGGGTAGGTGATTATAAGTGGACCTCCCTGCCAGGTGAGAACT
ATGAACAATGCATCCACATGGATGGTCTATTGTATGCATTCACAGAAACCGGAGGAGTCTATACTTTTGATCTGACCGGT
CCTACCATCACAAGGAATATCATTGCAGAGGAGATGGAGAATTACATTAGTGCGACTGATGGGCACATGTACGTTGTTCA
GGCTCCATGGGGTGATATGTTGCAAGTTTGCAGAGACACTGAATGCACA---GAGGG---GTTCACAAAGACTAAGAAAA
TGATGTTATATAAAACTGATATGGCAGCAAAAGAGCTTGTGGAAATGCATGGCTTGCATGATCATGTGTTGTTTCTTGGG
CGTAGTCAGTTGCAATGCCTCAGTGCTGAGGAATACCCGCAACTGAAGACAAATTGTGTTTATTTCACAGACGACATGAC
ATATATTTCGAAGTATAAGAATGATGACCGGGATATAGGTATTCTCAACTTGGAAAATGGCAGCAGGGAAGAAATTGTAC
CTCAGCTTTGGTGCAACTGGCCAAATCCCATATGGATAACACCAAATCTCATGAGGATGAATATGTGATTCTACAAATAG
TTAACTTATTATATTTAT----ATACG---------------TATTAGAAACTGTATCA--------TAGGGCTGTGTTA
ACCAAAATTCCTAATTTTGTGGGCAAATGCTATGAAAACAGAAGCATGTTCTG----TATCTTCTCCATACTTGGTGTGC
TATA-TTTAATTGGCTTTTATTTTC-------------------------------------------------------
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>chr1B_422
--------------------------------------------------------------------------------
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-------------------------------------------ACGGAGTCCCCAG-TCCATCTCGCCACCACCTCCCAC
CT------GCCTTGTGCCCTATCGTGCTGCTACACTA---CATTTCCTCTGGTTTGTTCCTCTTCCTTCTCTCTTTCCTG
TCGTCGCGGGAACGGGATTGGGATCCGTCTGAGCCGCGTAGTCCGATTCCAGGTCCAAATCTTTC---TTTTTTCCCGTA
GTCTCCAGTCCAAATTTCGCGGGACTACTTGTCGTTCTTGGATTCGGACTCATTTCCTACTCGAATTAGAGCTGAGCTGA
GGCCTCGGTAGGTGGGTTGTGCTTCCTATTATATATACAAGTGCTGCCTGCCCCCTGTTCCTGCTAGGTTGAACTAAAGC
TGTGCGGTTGATAGCTGCGGAAGCGATTCATCATTCAGAAGATCCGATTTTGCAATTTCTCCAATGGGGACGTGTAGCTT
AGTGAGGATGATGAGCTTCCTGCAGCTAGACTTGAGAATTTTGCGTACGCTGCTGGCTCTTTCTCCACCTCCCGGTTCAC
ATTGGAAATTCAGAAAACACCCGCCATTTATGCTGATGGAGACCGAGACTGTGGTGGAAATATTGCCAGAGCCGCCGCTG
ATGGAGACCGAGACTGTGGTTGAAACACTGCTAGAGCTGCCGCTGGATGTATTGATGGATATCTTTTCCCTCCTGGAGCT
TCCTGACCTCATTCGTGTGAGCTCTGTCTGCTCCTTTTGGCGCTCTGCATATAGTACTCTACATAACCAGCTTGGGCAAT
ATAAGCGGCCACAGACACCTTGCCTCCTCTACGCCTCCGAATCCGACGGTGAGAACGGAGCTTGTCTCTACAATCTTGCA
GAAAAGAGGGTCTACAAGCTAACTCTTCCGGATCCACCTATCCGCAGTAGGCATCTCATTGGGTCCTCCCATGGCTGGTT
AGTTACTGCTGATGAGAAGTCCGAGCTTCACCTTCTCAATCCGATCACTGGTCAACAGATTGCCCTCCCCTCGGTGATCA
CCATTGAGCAAGTAGAGCCGATCTTAGACAGTGCCGGTGCAGTTAATATCTATAAGATGTGGGATTTAGAGCAGGACGAT
GATCTGAATGAGTTTTCTGACTGCCTCTGCATCAGGGCTTTTGTGTTTCCTGATCCACCCACGGGAAGCTACATTGTGGT
TCTCATCCACAATCCAGAGCAATATCTTTCGTTTGCAAGGGTAGGTGATTATAAGTGGACCTCACTGCCGGGTGAGAACT
ATGAACAATGCATCCACATGGATGGTCTATTGTATGCATTCACAGACACCGGAGGAGTCTATACTTTTGATCTGACCGGT
CCTACCATCACAAGGAATATCATTGCAGAGGAGATGGAGAATTACATTAGTGCGACTGATGGGCACATGTACGTTGTTCA
GGCTCCATGGGGTGATATGTTGCAAGTTTGCAGAGACACTGAACGCACAGCTGAGGG---GTTCACAAAGACTAAGAAAA
TGATGTTATATAAAACTGATATGGCAGCAAAAGAGCTTGTGGAAATGCATGGCTTGCATGATCATGTGTTGTTTCTTGGG
CGTAGTCAGTTGCAATGCCTTAGTGCTGAGGAATACCCGCAACTGAAGACAAATTGTGTTTATTTCACAGACGACATGAC
ATATATTTCGAAGTATAAGAATGATGACCGGGATATAGGTATTCTCAACTTGGAAAATGGCAGCAGGGAAGAAATTGTAT
CTCAGCTTTGGTGCAACTGGCCAAATCCCATATGGATAACACCAAATCTCATGAGGATGAATATGTGATTCTACAAATAG
TTAACTTATTATATTTAT----ATACG---------------TATTAGAAACTGTATCATAGCCTCATAGGGCTGTGTTA
ACCAAAATTCCTAATTTTGTGGGCAAATGCTATGAAAACAGAAGCATGTTCTG----TATCTTCTCCATACTTGGTGTGC
TATA-TTTAATTGGCTTTTATTTTC-------------------------------------------------------
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--------------------------------------
>chr1B_2363
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---------------------------AATTGTTAGGTTGATCTCTCTGGTGTGGGCCCAAC---GGCCCAACGGACCCC
T-GATCCGCGCCCTGATCGGGGGCGCCCAACCACAATATGGTTGACGGGCCCCTGTCACGCATCGCTACATAAAGAGGTG
GGGGCCGGCGGCACGCAGTACGAGGTTCACCGCGTTGCCAGGCTCCCCACCGAAAACCCCGACCCGATCTAGGT-CTAGC
GCTGACAGTGACGGGAAGCTCCGCCGCCGCCACTGCCCA-CACACCGCCGCCATCCACTCCCTGCCATCATC--GGCCAC
CGTCACCATGGCCGGCACCGGGAGTTCCTCATCTGCACCTGGACAAGGTAGGTTCACCGGATC-TCCTAGCCCACTCCGA
TC-TAAGG--TTCTATCAATGGTATCAG--AGCCAGATCGGGCTAGAAGATTTTCGGTAAAAAGAAAACAAAGAAAGGAA
AAGGAT-CCCCAAACCCCAAAGAACCCTAGCAGGGC--------------ACA-------------AAAAA-AAGGAT--
---------CCCCAAAAGTTCATCGGACTAGGGCCTCGGGCCTCACCGGCAAAGAGCACCGCCGCAAGG-CCACGCC-GT
TCCTCTCGATCCGGACGCGCATCGGCATGCCGAGGCGT-C-GGACGAAGAAC-TACCCCACACGGGGCAAAGGG--C---
------ATCGCGAACAAACCGCTCGACGGCGGCGCGCTCACCGCA-AGGTGGACGCGCA-GCCGGCGAGGGGGATGACCA
CGACACCGCAGTATAGTGCTCTGCCGTCGTCGAACATGAATGGGAGCTGAAGGGGCAAAGGAGCCTCGTCCTCTCTGTCA
TTGTAGGTGGAGATGGAACGAGGAAGAGGGAGAAGCTC
>chr2B_2363
AACTTG--------------------------------------------------------------------------
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--------------------------------TTACGTTGATCTCTCCCGTGTGGGCCCAAC---GGCCCAATGGACCCC
T-GATCCGCGCCCTGATCAGGGGCGCCCAACCACAATATGGTTGACGGGCCCCTGTCACGCAGCGCTACATAAAGAGGTG
GGGGCCGGCGGCACGCAGTACGAGGTTCACCGCGTTGCCAGGCTTCCCACCGAAAACCCCGACCCGATCTAGGT-CTAGC
GCTGACAGTGACGGGAAGCTCCGCCGCCGCCACTGCCCA-CACACCGCCGCCATCCACTCCCTGCCATCACC--GA-CAC
CGTCACCATGGCCGGCACCGGGAGTTCCTCATCTGCACCTGGACAAGGTAGGTTCACCGGATC-TCCTAGCCCACTCCAA
TC-TAAGG--TTCTATCAATGGTATCAGGTAGCCAGATCGGGCTAGAAGATTTTCGGTAAAAAGAAAACAAAGAAAGGAA
AAGGAT-CCCAAAACCCCAAAGAACCCTAGCAGGGCAAAGA-------------------------AAAGCAATCAAAAG
---------AACCAACAGTTGACCGGAGAAGGCCTTGGGC---CGCCGGCAAAGAGCGCCGCCGTCAGG-CCGCGCCTGT
TCCCCTCGATCCCCACACGCATCAGCAAGCCGAGGTGTGG-GGACGAAGAAT-CACCCTGCAAAGGGCAAAGGGGGC---
------ACCGCAGCCACGCCGTTCGACGGCGGCGCGCTT-CCGCTAAGTGAAACGCGCC-ACCGGCGAAGGG--------
--------------------------------------------------------------------------------
--------------------------------------
>chr1B_2365
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-----------------------------CTGTTAGGTTGATCTCTCCCGTGTGGGCCCAAC---GGCCCAACGGACCCC
T-GATCCGCGCCCTGATCGGGGGCGCCCAACCACAATATGGTTGACGGGCCCCTGTCACGCAGCGCTACATAAAGAGGTG
GGGGCCAGTGGCACGCAGTAGGAGGTTCACCGCGTTGCCAGGCTCCCCACCGAAAACCCCGACCCGATCTAGGT-CTAGC
ACTGACAGTGACGGGAAGCTCCGCCGCCGCCACTGCCCA-CACACTGCCGCCATCCACTCCCTGTCATCACC--GGGCAC
CGTCACCATGGCCGGCACCGGGAGTTCCTCATCTGTACCTGGACAAGGTAGGTTCACCAAATC-TCCTAGCCCACTCCGA
TC-TAAGG--TTCTATCAATGGTATCAGGTAGCCAGATCGGGCTAGAAGATTTTCGGTAAAAAGAAAACAAAGAAAGGAA
AAGGATCCCCAAACCCCCAAAGAACCCTAACAGGGCACAGA-------------------------AAAACAAAAAAGCA
AACAAAAAAATCACAAAGATCACCGGAGGAGGCACTCGGG-CTCGCCGGCAAAGTGCGCCGCCACACTGTCCGCGCCAGT
TCCTCTCGATCCGAACGGGCATCGGCAAGCCGAGCCGTCC-GGACGAAGAAC-AACCCCGCGAGGGGCAAAGTGATGGCA
AAGTGTACCGCGGCCGATCCGTTCGACGGCGGCGCGCTCACCGCAGAGGGGAACACGCA-GCCGGCGAAGAGAATGGCAA
CGGCACCGC-----------------------------------------------------------------------
--------------------------------------
>chr2B_2365
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-----------------------------CTGTTAGGTTGATCTCTATCCTGTTCGAACCCAACGGGTCGAACGAGCCCC
T-GACTCGCGCCCTGATCGGGGGCGCCCAACCAAACCATGGTTGGTGGGCCCCTGTCGC-CAGCGCAATATAAAGAGGTA
GGGTGCCGGGGCACGAAGTACAAGGTTGACCGTGCACCAC--AACACCACCG-AAACACCAATCCGATCTAGGATTTTGC
GCTAG-GCCGACGGGAAGCTCCGCCGCCATCATCTCAGTCCACATCGCCGCCATCT---------------------CCA
CACCACCATGGCCGGCGCTGGATCGAGTTTATCCGCACCAGGAGAAGGTAGGTGTACCGAAAG-ATCTAACCTA-TCCGA
TC-CAAAACAATCTATCAATGGTATCAGGTAGCCAGATCGGGTTAGACC-TTTTCGGTAGAAAGAATTCAAAGCAAAAGT
TT-GATCCCT-AAACCCCAAAGAACCCTAGAAGGGCACAGAGAAAAGAAAACA-------------AAAAA-AAGGAT--
---------CCCCAAAAGTTCACTGGACTAGGGCCTCGGGCCTCGCCGGCAAAGAGCGCCGCCGCAAGG-CCGCACC-GT
TCCTCTCGATCCGGACGCGCATCGGCAAGCCGAGGCGT-C-GGACGAAGAAC-TACCCCACACGGGGCACAGGG--C---
------ATCGCGAACAAACCACTCGACGGCGGCGCGCTCACCGCA-AGGTGGACGCGCA-GCCGGCGAGGGGGATGATCA
CGACGCCGCCGTAGAGTGCTCTGCCCTCGTCGAAAACGAATGGGAGCACAAGGGGCAAAGTAGCCACGTCCTCACTGTCA
GAGTAGGTGGAGATGGAGCGGGGAA-AGGGAGATGCTC
>chr2B_2365
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-----------------------------CTGTTAGGTTGATCTCCTCCGTGTGGGCCCAAC---GGCCCACCGGGCCTT
TAGATCCGCGCCCTGATCGAGGGCGCCCAACC-CACTATGGCTAGCGGCCCCCTGTCACACTTTGCCATATAAAGAGGTG
GGGGCCGGCGGCTCGCAACACGAGGTTCATCACAA-GCCGCACATCCCACCG-ATAATCCCTTCCGATCTAGGCTTCT-C
GCTGT-AGTGACGGGAAGCACCGCCACCACCTCGC-------------------CCACTCTCCGCCATCACCATGTGCCA
CATCACCATGATGGCCTCCGGCTCGAGCTCGCCAGCACAAGGAGAAGGCGGTACTACCATGAATTCCTAACCCTAACCGA
TC-CAGTG--ATCTATCAATGGTTTCAGACAG---GTTGGGTATAGGAT-TTTTCGGTTGAAATTGATCAC--AAAGAAA
AAAGTTCCCCT---CCCCAAAGAACCCTAGCAGGGAAGAGA-------------------------AAAGCAAACAAAAT
-------AACCACAAAAGTTCACCGGCGTATGGCCTCGGGCCTCGCCGGCAAAGAGCGCTGCCGTAAGG-CCACGCCTGT
TCCTCTTGATCCCATCGCGCATCGGCAAGCCGAGGCGACAAGGACGAAGAAC-CACCCC---------------------
--------------------------------------------------------------------------------
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>chr1B_2366
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------------------------------TGTTAGGTTGATCTCTATCCCGTTCGAACCCAACGGGTCGAACGGGCCCC
T-GAGTCGCGCCCTGATCGGGGGCGCCCAACCAAACAATGGTTGGTGGGCCCCTGTCGC-CAGCGCAATATAAAAAGGTG
GGGTGCCGGGGCACGGATTACGAGGTTGACCGTGCACCAC--AACACCACCG-AAACACCAATCCGATCTAGGGTTTTGC
GCTAG-GCCGACGGGAAGCTCCGCCGCCACCACCTCGCC-CACACTT------------------------------CGC
CATCACCATGGCCGATGCTGGATCGAGTTCGTCCGCACCAGGAGAAGGTAGGTT-ACCGGATC-TACTAGCCTACTCCGA
TCATAAGG--TTCTATCAATGGTATTAGGTAGCCAGATCGGGCTAGAATATTTTCGGTAAAAAGAAAACGAAGAAAGGAA
AAGGATCCCC-AAACCCCAAAGAACCCTAGCAGGGCACAGG-------------------------AAAAAAAAAGAT--
---------CCCCAAAAGTTCACCGGACTAGGGCCTCGGGCCTCGCCGGCAAAGAGCGCCGCCGAAAGG-CCACGCC-GT
TCCTCTCGATCCGGACGCGCATCGGCATGCCGAGGCGT-C-GGACGAAGAAC-TACCCCACACGGGGCAAAGGG--C---
------ATCGCGAACAAACCGCTCGACGGCGGCGCGCTCACCGCA-AGGTGGACGCGCA-GCCGGCGAGGGGGATGACCA
CGACGCCGCAGTATAGTGCTCTGCCGTCGTCGAACACGAATGGGAGCAGAAGGGGCAAAGGAGCCTCGTCCTCTCTGTCA
CTGTAGGTGGAGATGGAACGGGGAAGAGGGAGAAGCTC
>chr7D_2366
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------------------------------TGTTAGATTGATCTCTCTCCCGTTCGAACCCAACGGGTAGAACGGGCCCC
T-GACTCGCGCCCTGATCGGGGGCGCCCAACCAAACCATGCTTGGTGGGCCCCTGTGAC-CCGCGCTATATAAACAGAGG
TGGGGGCA-GGCACGACTTACGAGGTTAATCGC--TGCCACAATCCCCACCT-ACAATCCCTACCGATCTAGGG-TTAGC
GCGGT-GCTCACGGGAAGCTCCACCACCGCCGCCATCCA-CTCTCTGG----------TCTCTGCCATCACC--GGCCAC
CGTCACCATGGCCGGCACCGGGAGTTCCTCATCTGGACAAGGAGAAGGTAGGTTCACCAAAATC-ACTAGCCTCCACCGA
TC-CAAGA--GTCTATCAATGGTATCAGGCCATGCTAGGCT-----ATGATTTTCGGTGCAAAGTATAAACAGAGAAAAA
AAAAGATCTCT---CCCCAAAGAACCCTAGCAGGGCAGAGA-------------------------AAAGCAAACAAAAG
-----AAAAACCCAAAAGTTCACCGGAGCAGGGCCTCGGGCCACGCCGGCAAAGAGTGCCGCCGCAAGG-CCGCGCC-GT
TCCTCTCGATCCGGACGGGCATCGGCAAGCCGAGCCGT-CCGGAAGAAGAACCAACCCCACATGGGGCAAAGAG--C---
------ACCACCACCAAGCCGTTTGACGGCGGCGCGTTCACCCTCGTGGTGCTCGCGCACGCCGGCAAAGGGG-------
--------------------------------------------------------------------------------
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>chr5B_2392
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----------------------------------------------------------CCCAACGGGTCGAACGGGCCCA
T-GACTCGCGCCCTGATCGGGGGGACCCAACCAAACCATGGTTGGTGGGCCCCTGTCGC-CAGCGCAATATAAAGAGGTG
GGGTGCCGGGGCATGGATTAAGAGGTTGACCGTGCACCAC--AACACCACCG-ACACACCAATCCGATCTAGGGTTTTGC
GCTAG-GCCGACGGGAAGCTCCGCCGCCACCATCTCAGTCCACATCGCCGCCGTCT---------------------CCA
CACCACCATGGCCGGCGCTGGATCGAGTTCATCCGCACCAGGAGAAGGTAGGTGTACCGAAAG-ATCTAACCTA-TCCGA
TC-CAAAGCAATCTATCAATGGTATCAGGTAGCCAGATCGGGTTAGACC-TTTTCAGTAGAAAGAATTCAACGCAAAAGG
TT-GACCCCT-AAACCCCAAAGAACCCTAGAAGGGCACAGAGAAAAGCAAACA-------------AAAAAAAAGGAT--
---------CCCCAAAAGTTCACCGGACTAGGGCCTCGGGCCTCGCCGGCAAAGAGCGCCGCCGCAACG-CCGCGCC-GT
TCCTCTCGATCCGGACGCGCATCGGCAAGCCGAGGCGT-C-GGACGAAGAAC-TACCCCACACGGGGCAAAGGG--C---
------ATCGCGAACAAACCGCTCGACGGCGGCGCGCTCACCGCA-AGGTGGACGCGCA-GCCGGCGAGGGGGATGATCA
CGACACCGCCGTAGAGT--TCTGCCCTCGTCGAAAACGAATGGGAGCACAAGGGGCAAAGTAGCCTCGTCCTCACTGTCA
GAGTAGGTGGAGATGGAGCGGGGAA-AGGGAGATGCTC
>SNPs
SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
--------------------------------------------------------------------------------
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------S-----------------S-------------------------------------------------------
---------------------SS-------------------------------------------------------S-
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------S---------------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------------------------------------------S--------
-------------------S-----S-----------------------------------------------S------
-----------------------------------------S--------------------S----------S------
----------SS--SS------------------------------------S------S---S----------------
---------------------------------S----------------------SSSS-S--S--S-----S------
--S-----------------------------S-----------S-S---------------------------------
--------------------------S--S-SS---------S------S---S-----------------S---SS--S
----S-----S-S------------SS--------------------------S-----------S--------------
-------------------------------------------------------S------S-----------------
S----S----S-S-S---SSSS---------------S-------------------------------S---S---S--
-S---------S--S---------------------S-------------------------S---SSS----S------
---------------------S--------------------------S-------------------------------
--------------S-----------------S----------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--SS-----------S------------------S--------------------S------------------------
----------------S------------------------------------SSSSSSSSSSSSS--------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
------------------------------------S--S------------------------S---------------
-------------S----------------------------------------------S-------------------
-S-----S------------------------------
>forward_585
--------------------------------------------------------------------------------
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-----GTGGGAACGGGATTGGGATT-------------------------------------------------------
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>reverse_2536
--------------------------------------------------------------------------------
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-------------------------------------------------------CCACGCAGCGCTACATAAAG-----
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--------------------------------------
