>input_sequence_57868
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-------------------------------------------------------------------ATGGCCACTCCCT
CCGCGCCACGTCTCC---------------------ACTCCCCCATGCCTATCCTCTTCCTCGCCGCCGGCCCGCTCGCC
GCCGTCCACTTCTCTGCCCGCTGCCGCCTCCGCCTCCGCCTCCGCATCCCCCACGTCGCCACCGCCGCCGGCGCTGCCAC
CGCTCCGGGAAACAGCTTCGCCGTCGAGGACTACCTCGTCGCCAACTGCCACCTCACCCAGCCGCAGGCCGTCAAGGCCT
CCAAGAACCTCGCCCACCTCAAGTCCACCTCCAACCCCGACGCCGTCCTCGCATTCCTCGACGGCCTCGGCTTCTCCCCC
AAGGAGGTCGCCGCCGCCGTCGCCTCCAACCCGCGCATCCTCTGCGCCCGCATCGAGCGCTCCCTCGCGCCCATCTCCGC
GGAGCTCCGCGCCCTCGGCCTCTCCACCTCCCAGGTCGCCCGCCTCGCCAAGATCGCCGGCCGCTACTTCCTCTGCCGCA
GCTTCGTCTCCAAGGTGCAGTTCTGGCTCCCCCTGTTCGGCTCCCCGGAGAGGCTGCTCCAGGCCAGCGACTGGAACTAC
TGGCTCCTCACCTCCGACCTCGAGAAGGTAGTCGAGCCCAACGTCTCCTTCCTCAGGCAATGCGGGCTAAGTGCTTGTGA
TATTTCCAAGCTGCTCGTGGCCGCGCCGCGCCTGGTCACCATGCACCCCGAGTACGTCCAGGACTCCGTGCGGCGGGCCA
TTGAGCTGGGGGTGCCACCGGGCTCCCAGATGTTCCGGCACGCGATCTCCACCGCCGGCTGCATCGGCCAGGAGAAGGTG
GACGCCAAGATCGCCGTCCTCAGGGAGACGCTCGGGTGGTCGAAGGAGGAGGTGAGCCTGGCCATCAGCAAGGCGCCGCG
GATCCTGGTCGCCTCCGAGGAGAGGCTGCGCCGCAACGCCGAGTTCCTGGTCAAGGAGGTCGGGCTGGAGCCGCAGTACA
TCGCGCGCCGGTCGGTGCTGCTCATGTACAGCCTCGAGAGGAGGCTCATGCCCCGGCATCTCGTGGTGAAGCTCCTCAAG
CAGATGCGGCTGATCGAGGAAGACCGGTGCTTCTTCAACGTGGTGGCGCCGACGGAAGAGAAGTTCTTGGAGAAGTTCGT
AGCCCCCTTCGAGGACTGTATCCCCGGCCTCGGCGATGCTTACGACGCTGCCTGTGCCGGCAAGGCGCCGGTGAAAGCTG
AGTGA---------------------------------------------------------------------------
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--------------------------------------------------------
>chr6D_1_TraesCS6D01G284000
CTTTATTCTATTGTTGCTTTGTCGACAAAGCGGGGCGAAAGCCTGGTTCAGAAATATCCTGCCTTTTTTCGTGGATACCA
CTCAAAGACATTTGTTACAACTTGCATGGACGGCGGGGCTTAGCGGCCCCGTTTCGGGCCTGGCCGGGCC-AGGGTGACC
TAGTATGCCCCGCTGCCGTGTCCGGTCGGCTACCGCGATGGTGCTGGAGGCGCGGCCTTCTCGCACGACGGCGGTGGAGG
TGGTTCCCTTCCGCTCGGCCTTGGTGTTGTTGCTCTCGTCGCGTGGCGCTTCTCTCCGGTCTTCTCGGCCTCGTGTTGGT
GCTCGTAGTGAGACGGCGT-GG-TGGCGGCGCAACCGCGATGGCGCATTGGGCGGTGGTTTGGATGGTAGGCTCCGGATG
GGCGGTGGTGTTTGGTGTGCGGGAGAAATCCTTGCCGGTTCATCCGGCCCCAATGCAGTGACACCGGCGGGTGCCACCAT
TCCTTCTTGAAGGGTGTCGGTGGTAGCCATCCCCCACTTTCCTCCGCATACCGGGGGAAACCCTAGGACTCGTCCGGGCA
GCAGCGTCGTCGGTGTCGCATACCTTCTTGGAGGTGCTGCTTGGTACGCGGCACACGGAGCCTCGGGCTGTGGTGGGGTA
TTTCCGGAGAGCGCAGCGGTGGCGGGCC-TCCGCGCTTTGTCGAGTTGCCGTTGTTGGCATT-TGTTTCTTTTTT--TT-
TCTTCTGTCTTTGGGCTTGATGTGCTGCTCGCCA-AGTGTCACGGTGTGTACAATGTTGATTGGTTGCTTTGAAATACAA
AACGGGG-AAACCCTTTTTT-GTAAACTTTTCGATT--------TCCAGCGCGTTGTACTACTTCTCTATCTCTGTCTTG
CATGGTCCAGATACAGAAAATTAGTCAAT--------GAACGAGTAAAGCTATCTATCCAGTATCCACTCGCTCGCGCTC
GCGCACGCAGCACGCTACAGCGCCGCGGCTAGCAGCTGCGGCTGCGGATTACGCATCCCGGTCAAAAATGGCCACTCCCT
CCGCGCCACGTCTCC---------------------ACTCCCCCATGCCTATCCTCTTCCTCGCCGCCGGCCCGCTCGCC
GCCGTCCACTTCTCTGCCCGCTGCCGCCTCCGCCTCCGCCTCCGCATCCCCCACGTCGCCACCGCCGCCGGCGCTGCCAC
CGCTCCGGGAAACAGCTTCGCCGTCGAGGACTACCTCGTCGCCAACTGCCACCTCACCCAGCCGCAGGCCGTCAAGGCCT
CCAAGAACCTCGCCCACCTCAAGTCCACCTCCAACCCCGACGCCGTCCTCGCATTCCTCGACGGCCTCGGCTTCTCCCCC
AAGGAGGTCGCCGCCGCCGTCGCCTCCAACCCGCGCATCCTCTGCGCCCGCATCGAGCGCTCCCTCGCGCCCATCTCCGC
GGAGCTCCGCGCCCTCGGCCTCTCCACCTCCCAGGTCGCCCGCCTCGCCAAGATCGCCGGCCGCTACTTCCTCTGCCGCA
GCTTCGTCTCCAAGGTGCAGTTCTGGCTCCCCCTGTTCGGCTCCCCGGAGAGGCTGCTCCAGGCCAGCGACTGGAACTAC
TGGCTCCTCACCTCCGACCTCGAGAAGGTAGTCGAGCCCAACGTCTCCTTCCTCAGGCAATGCGGGCTAAGTGCTTGTGA
TATTTCCAAGCTGCTCGTGGCCGCGCCGCGCCTGGTCACCATGCACCCCGAGTACGTCCAGGACTCCGTGCGGCGGGCCA
TTGAGCTGGGGGTGCCACCGGGCTCCCAGATGTTCCGGCACGCGATCTCCACCGCCGGCTGCATCGGCCAGGAGAAGGTG
GACGCCAAGATCGCCGTCCTCAGGGAGACGCTCGGGTGGTCGAAGGAGGAGGTGAGCCTGGCCATCAGCAAGGCGCCGCG
GATCCTGGTCGCCTCCGAGGAGAGGCTGCGCCGCAACGCCGAGTTCCTGGTCAAGGAGGTCGGGCTGGAGCCGCAGTACA
TCGCGCGCCGGTCGGTGCTGCTCATGTACAGCCTCGAGAGGAGGCTCATGCCCCGGCATCTCGTGGTGAAGCTCCTCAAG
CAGATGCGGCTGATCGAGGAAGACCGGTGCTTCTTCAACGTGGTGGCGCCGACGGAAGAGAAGTTCTTGGAGAAGTTCGT
AGCCCCCTTCGAGGACTGTATCCCCGGCCTCGGCGATGCTTACGACGCTGCCTGTGCCGGCAAGGCGCCGGTGAAAGCTG
AGTGAGCAGTGAGTGACTAGAAGAGAATTCTGGAGGTGTGCGTAGGTGTGTATAACCTCA-------------ATTCTAC
TGATGAACAATACCAGATTCATGGCCATTTAGTGTAGGTTGATTACAGTCGACAGCAACGAGGTGGATGTTCATAATTTT
GGAACTTTGGAAGTGTTCATTACTGATTGAATGATGGA-TTTGGTGTAAAACTCTGAG-AAATAT--GCCCCTTTGGTTC
TGTCTTGTTGACAGAAGATGGACATCGCCATCTTGCATATGCG-----------TGCAATGCTTCAAAAGTGTTTAATGC
AGTGGTCAATTCTTATTGTGCGTATCTGAGTTGCTGTTAGCCCTAAAGTAATGCCTCTGCACAAATGTATTAAACCTAGA
TAGGAGTAGCTGGCTTCAGTATACTAGTATGCTTGCCAGTGCCACTGATCACAATGTGACCCAGCAAAAAATATTTTGGG
AGTACATATTTTGTAAGTTGCTTGAAATATTTATATACCTCAGTCGCCTTTTTAAGCCTTTGGATCAACATCCAACAATT
CACATCTCATCTAACTTTT-G-TATATCAGCTATGGATTCAAACTTGCACTGAAGTTGCATGATCTGGGAAGTACAAA-T
TTAGACTAACCAAGGTGCAATTTCAGGTGACTGAGATTTATGAAAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------TACAAACTACTCG------GAGCATCCTTGGGTCTGTATGTGACCTTT
CAAGAGGCTGCATTTTGTCTAGTGATTGCTTCTTAAGTTGGATAATGCTCTGTTGC------TAGATAGCCCATAGTGTG
ATGAGAGAAGTCCATAGCACTCCCTAAACTTGTCCGG--GTGTACT----------------------------------
---------ATACAATACCAAACTTTGCTTTGCAATTTACCCCTCTGAACTGAAGACCCTTCTTTTTATAACCCTTCGT-
--------------CCTTATTTGGCCGGTTTTGACCTGTTTGACTCCAATTTTGTCCTAGTAAGTGGTTCCACATCGCAT
ATTTTCTCCCCTCTGTT--ATGTCATTTCTCCCTCCTCACAACTAGAACTAAAATA
>chr6A_1
CTTTATTCTATTGTTGCTTTGTCGACAAAGCGGGGCAAAAGCCTGGTTCAGAAATATCTTGCCTTTTTTCATGGATACCA
CTCAAAGAAATTTGTTACTACTTGCATGGCCGGTGGGGCTTAGCGGACCCGTTT----------CGGGCCAGGGATGGCC
TGGTATGCCCTGCTGCCGTGTCCG-TCGGCTACCGCGACAGT--------------------------------------
--------------------------------------------------------------------------------
----------------------------GCGCAAGCGCGATGGCGCATTGGGCGGTGGTTTGGATGGTAGGCTCCGGATG
GGCGGTGATGTTTGGTGTGTGGGAGGAATCCTTGCCGGTTCGTCCGATCCCGATGCGGTGACACCGGTGGGTGCCACCAT
TCCTTCTTGAAGGGTGTCGGTGGTAGCCATCCCTCACTTTCCTTCGCATACCGGTCGAAACCCTAGGACTCGTCCGGACA
GCAGTGTCGTCAGCGTCGCATACCTTCTTGGAGGTGCTGCTTGGTACGCGGCACTTGGAGCCTCGAGCTGTGGTGGGGTG
TTTCCGGAGGGCGCAGCGGTGGCGGGCCTTCCGCGCTTTGTCGAGCTGCCATTGTTGGCATT-TGTTTCTT--CTTCT--
-TTTCTGTCTTTGGGCTTGATGTCTGCTCG--CCCAGCGTCGCGATGTGTACAATGTTAGTTGGTTGATTTGGAATACAA
AGCGGGG-AAATCCCTTTTGGGTAAACTTTTCGATT--------TCCAGCGCGTTGTACTACTTCTCTATCTCTGTCTTG
CATGGTCCAGATACAGAAAATTAGTCAATGTCTCAATGAACGAGTAAAGCTATCTATCCAGTATCCACTCGCTCGCGCTC
GCGCACGCAGCACGCTACAGCACCGCGGCTAGCAGCTGCGGCTGCGGATTACGCATCCCGGTCAAAAATGGCCACTCCCT
CCGCGCCACGTCTCC---------------------ACTCCCCCATGCCTATCCTCTTCCTCGCCGCCGGTCCGCTCGCC
GCCGTCCACTTCTCTGCCCGCTGCCGCCTCCGCCTCCGCCTCCGTATCCCCCACGTCGCCACCGCCGCCGGCGCTGCCAC
CACTCCGGGAAACAGCTTCGCCGTCGAGGACTACCTCGTCGCCAACTGCCACCTCACCCAGCCGCAGGCCGTCAAGGCCT
CCAAGAACCTCGCCCACCTCAAGTCCGCCTCCAACCCCGACGCCGTCCTCGCATTCCTCGACGGCCTCGGCTTCTCCCCC
AAGGAGGTCGCCGCCGCCGTCGCCTCCAACCCGCGCATCCTCTGCGCCCGCATCGAGCGCTCCCTCGCGCCCATCTCCGC
GGAGCTCCGCGCCCTCGGCCTCTCCACCTCCCAGGTCGCCCGCCTCGCCAAGATCGCCGGCCGCTACTTCCTCTGCCGCA
GCTTCGTGTCCAAGGTGCAGTTCTGGCTCCCCCTGTTCGGCTCCCCGGAGAGGCTGCTACAGGCCAGCGACTGGAACTAC
TGGCTCCTCACCTCCGACCTCGAGAAGGTGGTCGAGCCCAACGTCTCCTTCCTCAGGCAATGCGGGCTAAGTGCTTGTGA
TATTTCCAAGCTGCTCGTGGCCGCGCCGCGTCTGGTCACCATGCACCCCGAGTACGTCCAGGACTCCGTCAGGCGGGCCA
TTGAGCTCGGCGTGCCACCGGGCTCCCAGATGTTCCGGCACGCGATCTCCACCGCCGGCTGCATCGGCCAGGAGAAGGTG
GACGCCAAGATCGCCGTCCTCAGGGAGACGCTGGGGTGGTCGAAGGAGGAGGTGAGCCTGGCCATCAGCAAGGCGCCGCG
GATCCTGGTCGCCTCCGAGGAGAGGCTGCGCCGCAACGCCGAGTTCCTGGTCAAGGAGGTCGGGCTGGAGCCGCAGTACA
TCGCGCGCCGGTCGGTGCTGCTCATGTACAGCCTCGAGAGGAGGCTCATGCCCCGGCATCTCGTGGTGAAGCTCCTCAAG
CAGAGGCGGCTGATCGAGGAAGACCGGTGCTTCTTCAACGTGGTGGCGCCGACGGAGGAGAAGTTCTTGGAGAAGTTCGT
TGTCCCCTTCGAGGAATGTATCCCGGGCCTCGGCGATGCTTACGACGCTGCCTGTGCCGGCAAGGAGCCGGTGAAAGCTG
AGTGGGCAGTGAGTGACTAGAAGAGGATTCTGGAGGTGTGCTTTGGTGTGTATAACCTCA-------------ATTCTAC
TGATGAACAATACCAGATTCATGGCCATTTAGTGTAGGTTGATTACAGTCGACAGCAACGAGGTGGATGTTCATAATTTT
GGAACTT-GGAAGTGGTCATTACTGATTGAATAATGGA-TTTGGTGTAAAACTCCGAGCAAACAT--GTCTATTTGGTTC
TGTCTAGTTTACAGAAGATGAACATCGCCATCTTGCATATGCG-----------TGCAATGCTTCAAAAGTGTTTAACGC
AGTGGTCAATTCTTATTGTGCATATCTGAATTGCTGTTAGCCCTAAAGTAATGCCCCTGCACAATAC-ATTAAACCTAAA
TAGGAGTAGCTGGCTTCAGTATAA-----------------------------------------AACAAATACTTTGGG
AGTGTATATTTTGTAAGTTGCTTCAAATATTTATATACCTCAGTCGCCTTTTTAAGCCTTTGGACCAACATCCAACAATT
CACATCTCATCTAACTTTTTG-TATATCAGCTATCCATTCAAACTTGCACTGAAGTTGCATGATCTGGAAAGTATAAA-T
TTAGACAAACCAAGGTGCAATTTCAGGTGACTGAGATTTATGAAACCTT-------------------------------
--------------------------------------------------------------------------------
------------------------------------------TCG------GAGCATCCCTGGGTCTGTATGCAACCTTT
CGAGTGGCTGCATTTTGTTTAGTGATTGCTTCTTAAGTTGGATAATGCTCTGTTGCCCTGTCTAGATAGCCAACAGTGTG
ATGAGAGAAGTCCATAGCACTCCCTAAACTTGTCCGA--GTGTACT----------------------------------
---------ATACAATACCAAACTTTGCTTTGCAGTTTACCCCTCTGAACTATGAA-------------AACCCTTCTT-
--------------CCTTATTTAGCCGGTTTTGACCTGTTTGGCTACAGTTTTGTCCTAGTCAGTGGTGCCACATCGCAT
ATTTTCTCCCCTCTGTT--ATGTCATTTCTCCCTCCTCACAACTAAAATTAAAATA
>chr6B_1
CTTTATTCTATTGTTGCTTTGTCGATAAAGCGGGGCGAAAGCCTGGTTCAGAAATATCCTGCATTTTTTCGTGGATACCA
CTCAAAGACATTTGTTACTACTTGCAGAACTC------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------TTATGTTTTGAACTCCTATA
--------------------------------------------------------------------------------
------G-GAACTCCTTGTT-CGAAACTTTTCGATTTGTTGGAATCCAGCGCGTTGCAGTACTTCTCTATCTCTATCTTG
CATGGTCCTGATACAGAAAATTAGTCAAA--------GAACGAGTAAAGCTATCTATCCAGTATCCACTCGCTCGTGCTC
GCGCACGCAGCACGCTACAGCGCTGCGGCTAGCAGCTGCGGCTGTGGATTACGCATCCCGGTCAAAAATGGCCACTCCCT
CCGCGCCACGTCTCCTCCCCTGCCCCGCCATGCTCCACTCCCCCATGCCTATCGTCTTCCTCGCCGCCGGTCCGCTCGCC
GCCGTCCACTTCTCTGCCCGCTGCCGCCTCCGCCTCCGCCTCCGTATCCCCCACGTCGCTACCGCCGCCGGCGCTGCCAC
CGCTCCGGGAAACAGCTTCGCCGTCGAGGACTACCTCGTCGCCAACTGCCACCTCACCCAGCCGCAGGCCGTCAAGGCCT
CCAAGAACCTCGCCCACCTCAAGTCCGCCTCCAACCCCGACGCCGTCCTCGCATTCCTCGACGGCCTCGGCTTCTCCCCC
AAGGAGGTCGCCGCCGCCGTCGCCTCCAACCCGCGCATCCTCTGCGCCCGCATCGAGCGCTCCCTCGCGCCCATCTCCGC
GGAGCTCCGCGCCCTCGGCCTCTCCACCTCCCAGGTCGCCCGGCTCGCCAAGATCGCCGGCCGCTACTTCCTCTGCCGCA
GCTTCGTCTCCAAGGTGCAGTTCTGGCTCCCCCTGTTCGGCTCCCCGGAGAGGCTGCTCCAGGCCAGCGACTGGAACTAC
TGGCTCCTCACCTCCGACCTCGAGAAGGTGGTCGAGCCCAACGTCTCCTTCCTCAGGCAATGCGGGCTAAGTGCTTGTGA
TATTTCCAAGCTGCTCGTGGCCGCGCCGCGCCTGGTCACCATGCACCCCGAGTACGTCCAGGACTCCGTGCGGCGGGCCA
TTGAGCTCGGCGTGCCACCGGGCTCCCAGATGTTCCGGCACGCGATCTCCACCGCCGGGTGCATCGGCCAGGAGAAGGTG
GACGCCAAGATCGCCGTCCTCAGGGAGACTCTCGGGTGGTCCAAGGAGGAGGTGAGCCTGGCCATCAGCAAGGCGCCGCG
GATCCTGGTCGCCTCCGAGGAGAGGCTGCGCCGCAACGCCGAGTTCCTGGTCAAGGAGGTCGGGCTGGAGCCGCAGTACA
TCGCGCGCCGGTCGGTGCTGCTCATGTACAGCCTCGAGAGGAGGCTCATGCCCCGGCATCTCGTAGTGAAGCTCCTCAAG
CAGAGGCGGCTGATCGAGGAAGACCGGTGCTTCTTCAACGTGGTGGCGCCGACGGAAGAGAAGTTCTTGGAGAAGTTCGT
TGCCCCCTTCGAGGAGTGTATCCCCGGCCTCGGCGATGCTTACGACGCTGCCTGTACCGGGAAGGCGCCGGTGAAAGCTC
AGTGAGCACTGAGTGACTAGAAGAGAATCCTGGAGGTGTGCGTAGGTGTGTATACCCTCCCTTGTATAACCTGATTCTAC
TGATGAACAATACCAGATTCATGACCATTTAGTGTAGGTTGATTACAGTCGACAACAACGAGGTCGATGTTTATAATTTT
GGAACTT-GGAAGCGTTCATTACTGACTGAACAATGAGTTTTGGTGTAGAACTCTGAGCAAGCATATGTCTATTTGGTTC
TCTCTTGTTTACAGAAGATGAACATCGCCATCTTTCCCTTCCATATGCGTGCAATGCAATGCTTCAAAAGTGTTTAACAC
AGTGGTCATTTCTTATTGTGCATATCTGAGTTGCTGTTAGCCCTAAAGTAATCCCCCTGGACAATAC-ATTAAACCTAAA
TAGGAGTAGCTGGCTTCAGTATACTAGTATGCTTGCCAGTGCCACTGATCACAATGTGACCCAGCAAAAAATATTTTGGG
AGTGTATATTTTGTAAGTTGCTTGAAATATTTATATACCTCAGTCGCCTTTTTAAGCCTTTGGATCAACATCCAACAATT
CACATCTCATCTAACTTTT-G-TATATCAGCTATGGATTCAAACTTGCACTGAAGTTGCATGATCTGGAAAGTATAAA-T
TTAGACTAACCAAGGTGCAATTTCAGGTGACTGAGATTTATGAAAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------TACAAACTACTCG------AAGCATCCCTGGGTCTGTATGTGACCTTT
CGACAGGCTGCATTTTGTTTAGTGATTGCTTCTTAAGTTGGATAATGCTCTGTTGCCCTGTCTAGATAGCCCATAGTGTG
ATGAGAGAAGTCCATAGCACTCCATAAACTTGTCCGG--TTGTACTTTGGATCCAATTCGGGATTTTTCTTGGGAAGTTT
CGGGAAGAAATACAATACCTAACTTTGCTTTGCAGTTTACCCCTCTGAACTATGAA-------------AACCCTTCTTT
TTATAACCCTTCGTCCTTATTTAGCCGGTTTTGACCTGTTTGACTCCAATTTTGAACTAGTCAGTGGTGCCACATCGCAT
ATTTTCTCCCCTCTGTT--ATGTCATTTCTCCCTCCTCACAACTAAAATTAAAATA
>chr1B_104
--------------------------------------------------------------------------------
-----------------------GCACGGCCGGCGGGGCTTAGCGGGCCTGTTTCGGGCTTGGCCGGGCCAGGGGTGGCC
TGGTATGCCCCGCTGCCGTGTCCGGTCGGCTACCGCGACTTTGCCGGAGGCACG-GCTTCTCGCACGACGACGGTGGAGG
TGGTTCCCTTCCGCTCGGCCTTGGTGCTGCTGCTCTCGTTGCGTGGCGCTTCTCTCCGGTCTTCTCAGCCTCGTGGTGGT
GCTCGTAGTGAGACGGCGTGGG-CGGCGGCGCAACCGCGGTGGCGAATTGGGTGGTTGTTTGGATGGTTGGCTCCGGATG
GGCGGTGGTGTTTGGTGAGCGGGAGAAATCCTTGCCGGTTCGTCCGGCGCCGATGTAGTGACACCGGCGGGTGCCACCAT
TCCTTCTTGAAGGGCGTCGGTGGTAGCCATCCCCTACTTTCCTCCGCATACCGGGGGAAACCCTAGGACTTGTCCGGGCA
GCAGCGTCGTCGGCGTCGCATACCTTCTTGGAGGTGCTGCTTGGTATGCGGCACTCGGAGCCTCGGGCTGTGGTGGGGTG
TTTCCGGAGGGCGCAGCGGTGGCGGGCCTTCCGCGCTTTGTCGAGCTGCCGTTGTTGGCATTATGTTTC--TTCT--TC-
TTTTTTGTCTTTGGGCTTGTTGTGCTGCTCGCCCCGGCGTCGAGTTGTGTACTTTGTTGGTTGGTTGCTTTGGAATACAA
AGCGGGA-GAAACCCTTTTT------------------------------------------------------------
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--------------------------------------------------------
>chr1D_104
--------------------------------------------------------------------------------
-----------------------GCACGGCCGGCGGGGCTTCGCGGGCCCGTTTCGGGCCTGGCCAGGCCAGGGGTGGCC
TGGTATGCCCCGCTGCCGTGTCCGGTCGGCTACCGCGACAGTGCCGGAGGCTCGA-CTTCTCGCACGACGGCGGTGGAGG
TGGTTCCCTTCCGCTCGGCATTGGTGTTGTTGTTCTCGTCGCGTGGCGCTTCTCTCCGGTCTTCTCGGCCTCGTGGTGGT
CCTCGTAGTGAGACGGCGT-GGGCGGCGGCGCAACCGCGGTGGCGCATTGGGTGGTAGTTTGGATGGTTGGCTCCGGATG
GGCGGTGGTGTTTGGTGTGCGGGAGAAATCCTTGCCGGTTCGTCCGGCGCCGATGCGGTGACACCGGCGGGTGCCACCAT
TCCTTCTTGAAGGGCGTCGGTGGTAGCCATCCCCTACTTTCCTCCGCATACCGGGGGAAACCCTAGGACTTGTTCGGGCA
GCAGCGTCGTCGACGTCGCATACCTTCTTGGAGGTGCTGCTTGGTATGCGGCACTCGGAGCCTCGGGCGGTGGTGGGGTG
TTTCTGGAGGGCGCAGCAGTGGCGGGCCTTCCGCGCTTTGTCGATCTGCCGTTGTTGGCATTATGTTTC--TTCT--TCT
TTTTTTGTCTTTGGGCTTGTTGTGCTGCTCGCCCCAGCGTCGAGATGTATCCTATGTTGGCTGGTTGCTTTGGAATACAA
AGCGGGGGGGAAACCCTTTT-T----------------------------------------------------------
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--------------------------------------------------------
>chr7D_104
--------------------------------------------------------------------------------
-----------------------GCACGGCCGGCGAGGCTTAGCGGGCCCGTTTCGGGCCTGGCCGGGCCAGGGGTGGCC
TGGTATGCCCCGCTGCCGTGTCCGGTCGGCTACCGCGACAGCGCCGGAGGCTCGA-CTTCTCGCACGACGGCGGTGGAGG
TGGTTCCCTTCCGGTCGGCATTGGTGCTGTTGTTCTCGTCGCGTGGCGCTTCTCTCCGGTCTTCTCGGCCTCGTGGTGGT
CCTCGTAGTGAGACGGCGT-GGGCGGCGGCGCAACCGCGGTGGCGCATTGGGTGGTAGTTTGGATGGTTGGCTCCGGATG
GGCGGTGGTGTTTGGTGTGCGGGAGAAATCCTTGCCGGTTCGTCCGGCGCCGATGCGGTGACACCGGCGGGTGCTACCAT
TCCTTCTTGAAGGGCGTCGGTGGTAGCCATCCCCTACTTTCCTCCGCACGCCGGGGGAAACCCTAGGACTTGTCCGGGCA
GCAGCGTCGTCGGCGTCGCATACCTTCTTGGAGGTGCTGCTTGGTATGCGGCACTCGGAGCCTCGGGCGGTGGTGGGGTG
TTTCCGGAGGGCGCAGCGGTGGCGGGCCTTCCGCGCTTTGTCGATCTGCCGTTGTTGGCATTATGTTTC--TTCT--T--
-TTTTTGTCTTTGGGCTTGTTGTGCTGCTCGCCCCAGCGTCGAGATGTATCCTATGTTGGCTGGTTGCTTTGGAATACAA
AGCGGGGGGAAACCCTTTTT------------------------------------------------------------
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--------------------------------------------------------
>chr4D_104
--------------------------------------------------------------------------------
-----------------------GCACGGCCAGCGGGGCTTAGCGGGCCCGTTTCGGGCCTGGCGGGGCCAGGGGTGGCC
TGGTATGCCCCGCTACCGTGTCCGGTCGGCTACCGCGACAGTGCCGGAGGCTCGA-CTTCTCGCACGACGGCGGTGGAGG
TGGTTCCTTTCCGCTCGGCATTGGTGCTGTTGTTCTCGTCGCGTGGCGCTTCTCTCCGGTCTTCTCGGCCTCGTGGTGGT
CCTCGTAGTGAGACGGCGT-GGGCGGCGGCGCAACCGCGGTGGCGCATTGGGTGGTAATTTGGATGGTTGGCTCCGGATG
GGCGGTGGTGTTTGGTGTGCGGGAGAAATTCTTGCCGGTTCATCCGGCGCCGATGCGGTGACACCGGCGGGTGCCACCAT
TCCTTCTTGAAGGGCGTCGGTGGTAGCCATCCCCTACTTTCCTCCGCATACCGGGGGAAACCCTAGGACTTGTCTGGGCA
GCAGCGTCGTCGGCGTCGCATACCTTCTTGGAGGTGCTGCTTGGTATGCGGCACTCGGAGCCTCGGGCCGTGGTGGGGTG
TTTCCGGAGGGCGCAACGGTGGTGGCCCTTCCGCGCTTTGTCGATCTGCCGTTGTTGGCATTATGTTTC--TTCT--TC-
TTTTTTGTCTTTGGGCTTGTTGTGCTGCTCGCCCCAGCGTCGAGATGTATCCTATGTTGGCTGGTTGTTTTGGAATACAA
AGCGGGG-AAACCCTTTTT-------------------------------------------------------------
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--------------------------------------------------------
>chr5D_104
--------------------------------------------------------------------------------
-----------------------GCACGGCCGGCGGGGCTTAGCGGGCC-GTTTCGGGCCTGGCCGGGCCAGGGGTGGCC
TGGTATGCCCCGCCGCCATGTCCGGTCGGCTACCGCGACAGTGCCGGAGGCTCGA-CTTCTCGCACGACGGCGGTGGAGG
TGGTTCCCTTCGGCTCGGCATTGGTGCTGTTGTTCTCGTCGTGTGGCGCTTCTCTCCGGTCTTCTCGGCCTCGTGGTGGT
CCTCGTAGTGAGACGACGT-GGGAGGCGGCGCAACCGAGGTGGCGCATTGGGTGGTAGTTTGGATGGTTGGCTCCGGATG
GGCGGTGGTGTTTGGTGTGCGGGAGAAATCCTTGTCGGTTCGTCCGGCGCCGATGCGGTGACACCGGCGGGTGCCACCAT
TCCTTCTTGAAGGGCGTCGGTGGTAGCCATTCCCTACTTTCCTCCGCATACCGGGGGAAACCCTAGGACTTGTCCGGGCA
GCAGCGTCGTCGGTGTCGCATACCTTCTTGGAGGTGCTGCTTGGTATGCGGCACTCGGAACCTCGGGCGGTGGTGGGGTG
TTTCCGGAGGGCGCAACGGTGGCGGGCCTTCTGCGCTTTGTCGATCTGCCGTTGTTGGCATTATGTTTC--TTCTTCT--
-TTTTTGTCTTTGGGCTTATTGTGCTGCTCGCCCCAGCGTCGAGATGTATCCTATGTTGGCTGGTTGCTTTGGAATACAA
AGCGGGG-AAACCCTTTTTCGGTAAA------------------------------------------------------
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--------------------------------------------------------
>chr5A_104
--------------------------------------------------------------------------------
-----------------------GCACGGCCGGCGGGGCATAGCGGGCCCGTTTCGGGCCTGGGCAGGCCAAGGGTGACC
TGGTATGCCCTGCTGCCGTGTCCGGTCGGCTACCGCGACGGTGCCGAAGGCGCAGGCTTCTCGCACTACCGCGGTGGAGG
TGGTTCCCTTCCGCTCGGCCTTGGTGCTGCTGCTCTCGTCGTGTGGCACTTCTATCCGGTCTACTCGGCCTCGTGTTGGT
G-TCGTAGTGAGACGGCGT-GGGTGGCGGCGCAACCGCGATGGCGCATTGGGCGGTGGTTTGGATGGTAGGCTCCGGATG
GGTAGTGGTGTTTGGTGTGCGGGAGAAATCTTTACCGGTTCGTCCGACTCCGATGCGGTGACACCGGCGGGTGCCACCAT
TCCTTCTTGACGGGTGTCAGTGGTAGCCATCCCCCACTTTCCTCCGCATACTGAGGGAAACCCTAGGACTCGTCTGGGCA
GCAGCGTCGTCAGCGTCGCATACTTTCTTGGAGCTGCTGCTTGGTACGCGGCACTCGGAGCCTTGGGCTGTGGTAGGGTG
TTTCCGGAGGGCGCAGCGGTGGCGGGCCTTCCACGCTTTGTCGAGCTGTCGTTGTTGGCATT-TGTT-CTT--CCTCT--
-TTTCTGTCTTTGGGCTTGTTGTGCTGCTCGCCCCAGCGTCGCGATGTGTACTATGTTGGTTGGTTGTTTTGGAATACAA
AGCGGGGGGAAACCCTTTTT-CGG--------------------------------------------------------
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-------------------------------------------TAAA---------
>chr2D_108
--------------------------------------------------------------------------------
---------------------------GGCCGGCGGGGCTTACCGGGCCCGTTTCCGGCCTGGCCGGGCCAAGGGTGGCC
TAGTATGCCCCGCTGCCATGTCCGGTCGGCTACCGCGACGGTGCCGGAGGCGCGGGCTTCTTGCACGACGGCGGTGGAGG
TGGTTCCCTTCCGCTCGGCCTTGGTGCTGCCGCTCTCGTCGCGTGGAGCTTCTCTTCGGTCTTCTCGGCCTCGTGTTGGT
GCTCGTAGTGAGACGGCGT-GGATGGCGGCGCAACCGTGATGGCGCATTGGGCGGTGGTTTGGATGGTAGGCTCCGGATG
GGCGGTGGTGTTTGGTGTGCGGGAGAAATCCTTGCCGGTTTGTCCGGCTCCGATGTGGTGACACCGGGGGGTGCCACCAT
TCCTTCTTGAAGGGTGTCGGTGGTAGCCATCCCCCACTTTCCTCCGCATACCGAGGGAAACCCTAGGACTCGTCCGGGCA
GCAGCGTCGTCGGCGTCGCATACCTTCTTGGAGGTGCTGCTTGGTACGCGGCTCTCGGAGCCTCGGGCTGTGGTGGGGTG
TTTCCGAAGGGCGCAGCGATGGCGGGCCTTCCACGCTTTGTCGAGCTGCCGTTGTTGGCATT-TGTTTC--TTCTTCT--
-TTTCTATCTTTGGGCTTGTTGTGGTGCTCGCCCCAGCGTCGCGATGTGTACT--GTCGGTTGGTTGCTTTGGAATACA-
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>chr1B_112
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-------------------------------GGCGGGGCTTAGCGGGCCTGTTTCAGGCCTAGCCGGGCCAGGGGTGCCC
TGGTATGCCCCGCTGCCGTGTCCGGTCGGCTACCGCGATGGTGCCG-AGGCGCGGGCTTCTCGCACGATGGCGGTGGAGG
TGGTTCCCTCCCGCTCGGCCTTGGTGCTGCTGCTCTCGTCGTGTGGCGCTTCTCTCCGGTCTTCTCGGCCTCGTGTTGGT
GCTCGTAGTGAGACGGCGT-GGATGGCGGCGCAACCGCGATGGCGCATTGGGCGGTGGTTTGGTTGGTAGGCTCCGGATG
GGCGGTGGTGTTTGGCGTGCGGGAGAAATCCTTGCCGGCTCGTCCGGCTTCGATGCGGTGACACCGGCGGGTGCCACCAT
TCCTTCTTGAAGGGTGTCGGTGGTAGCCATTCTCCACTTCCCTCCGCGTACCGGGGGAAACCCTAGGACTCGTCCAGGCA
GCAGCGTCGTCGACGTCGCATACCTTCTTGGAGGTGCTGCTTGGTACGCGGCACTCAGAACCTCGGGCTGTGGTGTAGTG
TCTCTGGAGGGCGCAGCGGTGGCGGGGCTTCCGCGCTTAGTCGAGTTGCCGTTGTTGGCATT-TGTTTC--TTCTTCC--
-TTTCT-TCTTTGGGCTTGTTGTGCTGCTCGCCCCAGCATCGCGTT-TGTACT--GTTGGTT-GGTGCTTTGGAATACAA
AGCGGGGTGAAACCCTTTTT-TGG--------------------------------------------------------
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-------------------------------------------TAAAATT------
>chr1D_112
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-------------------------------GGCGGGGCTTAGCGGGCCCGTTTCGGGCCTGGCCGGGCCAGGGGTGGCC
TGGTATGCCCTGCTGCCGTGTTCGGTCGGCTACCGCGATGGTGCCGGAGGCGCGGGCTTCTCGCACGACGGCGGTGGAGG
TGGTTCCCTCCCGCTCGGCCTTGGTGCTGCTGCTCTCGTCGTGTGGCGCTTCTCTCCGGTCTTCTCGGCCTCGTGTTGGT
GCTCGTAGTGAGACGGTGT-GGGTGGCGGCGCAACCGCGATGGCGCATTGGGCGGTGGTTTGGTTGGTAGGCTCCGGATG
GGCGGTGGTGTTTGGCGTGCGGGAGAAATCTTTGCCGGCTCGTCCGGCTCCGATGCGGTGACACCGGCGGGTGCCACCAT
CCCTTCTTGAAGGGTGTCGGTGGTAGCCATTCTCCACTTCCCTCCGCGTACCGGGGGAAACCCTAGGACTCGTCCGGGCA
GCAGCGTCGTCGACGTCGCATACCTTCTTGGAGGTGCTGCTTGGTACGCGGCACTCGGAACCTCGGGCTGTGGTGTAGTG
TCTCTAGAGGGCGCAGCGGTGGCGGGCCTTCCGCGCTTAGTCGACCTGCCGTTGTTGGCATT-TGTTTC--TTTTTCC--
-TTTCT-TCTTTGGGCTTGTTGTGCTGCTCGCCCCAGCATCGCGTT-TGT-CT--GTTGGTT-GGTGCTTTGGAATACAA
AGCGGGGGGAAACCCTTTTT------------------------------------------------------------
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>chr6A_2691
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----------------------------------------------CCTTTTTAAGCCTTTGGGTCAACATCCAACAATT
CACATCTCATCTAATTTTGTACTATATCAACTATGGATTCAAACTCACACTAAATTTCCATGATCGGAG-----------
---TACTAACCAAGGTGCAATTTCAGGTGACTGACATTTACGAAAATTCTAGGCAACTGAGGGATTAGCAAGTCTGAATT
ATTTCAGTATTTTGTCTGATTTCTGGAAGACATTCTAATAAAAAATAGACCATTAAAGAAAAATACTCCCTCCGTAAAGA
AATATAACCTTTATATTTCTTTACGGACGGAGTACAGACTACTCA------GAGCTTCCCGGGGTCTGTATGCAACCTTT
TGAGTGGCTGCATTTTGTTTAGTGATTGCCTTTTAAGTTGGATAATGCTCTGTTGCCCTGTCTAGATAGCCCATAGTGTG
ATGAGAGAAGTCCATAGCACTCCCTAAACTTGTCCTAGGGTTTACT----------------------------------
---------TTACAATCCCAAACTTTGTTTTGCAGTTTACCCCTCCGAATCATGAA-------------ACCCCTTCATT
TTACAATCCTTCGTCCCTATTTAGCTGGTTTTGACCTGCTTGACTCCAATTTTGTCCTAGTTAGTGGTGCCACATCACAT
ATCCCCCCCCCCCTCTATCATGCCATTTCTCTCTCCTCACAACTAAAATTAAAATA
>chr6B_2726
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-ACATCTCGTCTAATTTTGTACTATATCAACTATGGATTCAAACTCACACTAAATTTCCATGATCGGGAGAGTACTACGT
TTATACTAACCAAGGTGCAATTTCAGGTGACTGAGATTTACGAAAATTCTAGGCAACTGAGGGATTAGCAAGTCTGAATT
ATTTCAGTATTTTGTCTGATTTCTGGAAGACGTTCTAATAAAAAATAGACCACTAAAGAAAAATACTCCCTCCGTAAAGA
AATATA-----------------------GAGTACAAACTACTCAAACTTTGAGCATCCCAGGGTCTGTATGCAACCTTT
CGAGTGGCTGCATTCTGTTTAGCGATTGCCTTTTAAGTTGGATAATGCTCTGTTGCCCTGTCTAGGTAGCCCATATTGTG
ATGAGAGAAGTCCATAGCACTCCCTAAACTTGTCTTAGGGTTTACT----------------------------------
---------TTACAATCCCAAACTTTGTTTTGCAGTTTACCCCTCTGAACTATGAA-------------AACCCTTCATT
TTACAATCCTTCGTCCTTATTTAGCTGGTTTTGACCTGCTTGACTCCA--------------------------------
--------------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
------------------S----------S----------------S---------------------------------
--------------------------------------------S----------S------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------S----------------------------
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------------------------------------------------------S------------------------S
---------S----------------------------------------------------------------------
-S-------------------------------S---S---S--S--------------S------------S-------
-S------------------------------------------------------------------------------
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----------------------------------------------------------------------S---------
--------------------------------------------S-----------------------------------
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--------------------------S-----------------------------------------------------
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-----------------------------S--------------------------------------------------
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-------S--S---------------------------------------------------------------------
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----S---------------------------------------------------------------------------
S--------------S----------------------------------------------------------------
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-------S------------------------S-----------------------------S-----S-SS--------
---------S----------S--------------------------------------------------------S--
---------------------S---------------------------------S--------SSSS----------S-
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---SS---------------------------------------------------------------------------
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-----------------------------------------------------------S--------------------
-S----------------S-------------------------------------------------------------
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----------------------------------S----------------SSSS-SSSSSSSSSSSSS--------S--
----------------------S--------------------------------------S------S-----------
---------------------------------------------S--S-------
>forward_650
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----------------------------------------------------------------------TGGTGGGGTA
TTTCCGGAGA----------------------------------------------------------------------
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>reverse_2490
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---------GACAGAAGATGGACATCGCCA--------------------------------------------------
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--------------------------------------------------------
