>input_sequence_57839
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-------------------------ATGGCATTGGACGTGCTCGTCAGGCTGCTGATCCTCGCGGCCGTCGCGAGCGCCA
TGCCGGTGCCGGGCGCCGCGGATCCCGCCGGCGCCGGGCTCGCCATCGGGTTCTACGACAAGAGGTGCCCGAAAGCGGAG
GAGCTGGTGCTCGAGGAGATGCGGGACATCGTCCACGAGGACAGGACCCTCGGCCCGGCGCTGCTGCGGCTTCTCTTCCA
CGACTGCTTCGTCAGGGTGCGCATTGCGCTGCTTTCTT----TGCCGTGCCGCGTCGCGTGCACGGGCCGTCTGAATGTG
TTTTGCTTAACCTGAACTGGATGCGTGATCTGCAGGGGTGTGACGGGTCGATCATGCTGAAATCGAGGAGCAAGAAGGGG
GAGAGGGACGCCAAGCCCATGAGCTACAGCCTCCGCGGCTTCGACGAGGTCGAGAGGATCAAGGCCAAGCTGGAGGACGA
GTGCCCGCTGACCGTGTCGTGCGCAGACATCATCATCATGGCCGCGCGGGACGCCGTGTACCTGGTAATTTAAGCAGATC
GATAATCCCCCCTTTCATGGCAA-CCATGGATTTTCTCAAGCTTTCTTTTTAGCTGACCAAACTGCCTCGTTG-------
TTCCAGACCAACGGGCCACGGTTCCCGGTGGAGACCGGACGCCGGGACGGCAAGGTGTCCTCATGCCTCGACGCCGAGAA
CGACCTGGCGCCGCCGAACGCCAACATTGTGGACCTGAAGACCTACTTCAGCGTGAAGAACCTGTCGTGGAAGGACCTCG
TCGTCTTGTCAGGGAGCCACACGATCGGGAGGGCGCAGTGCAACGCGTTCGCGCCGGACCGGCTCTACAACAACAGCGGC
AAAGGGGTGCAGGACCCGACGCTGGACAAGGCGTACGCTCCGGAGCTGCGGGAGAGGTGCGAGCCAGGCAACGAGAAAGA
CGAGACGCCCGTGGACATGGACCCCAAGAGCCCCTACGAGTTCGACCTCAGCTACTACCGGGACGTGCTCAGCAACAGGA
CCCTGTTCGTCTCCGACCAGGCGCTGCTCGACGACAAGTTGACGAGGGACTACGTGGCGAGGATGGCGGCCGCCGAGTCG
ACGGAGGAGTACTTCCATGACTACGCCACCGCCATGATCAACATGGGCAGGATGGAGGTGCTCACCGGCGACAACGGGGA
GATCAGGAAAATCTGCAGCGCGTACGTTCACTAA----------------------------------------------
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>chr3B_1_TraesCS3B01G354000
ACAAATAAATCGCGAATCTTATAACTATTCCACGTAACGTAATAAATATGTAGCCCATGC-TGATTCCTAAAATAAATTG
TAACCCAATCCAACCAAGGACATTCCCCTCCAGCATACAAATAAACTAAGGAGCAAATC---------------------
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--------------------------------------------------------------------AAGTAT---GGC
CGTCTGATTCTACGATTGGGTTCTGTTAAACACATCACTGTTCTTTGACCTTGACAAGTTCTAGTTTGCGTAAACGGCGA
TAACAGGCAGGTGGAGTAGCTTACCACGAAGAAGCGTATGCCTGCACAGCCTGTCATCCGCCCGTGCTACACGCCAACTA
-CCCTGGTCAGCACGGCCACCAGAGACCAGTTAAAATGTAGGCGCCTGGATATTTGTTTGTTCATTTGGTCAGCTCATTT
TCCATTAGATGCTCGCATGCCTCTACAAATGCATCGATCGGTTCGCCAATCTTGCCTTCATATATTCACTGCCATGTTCA
ACTGTTCATGGATGTGCAGAAAAGCTATATCGTAGTCGGCCGAG----GCGTGTGAACAGCGTGCGTTGACAAGTGCAAA
AGCCCGCATCCACGACCGCC-----GTCCAGACGCGGAACCAATCTGCTCGGCGCACTCGCGCCCCCTGGTCCAGTCCAG
TCTCATGTGCCGCGTGAAATGGGGGGAGGTTTTGTTCCCTTCTGCT-CGCCTTTGCGCGTAGCCTCCACCACCCCATTCC
CATTCCCGTTCCCAGCTA-----GCTAGCCAGCCATTGTCCGCCTCAGTTTTTAACTAACTTGCGAATTCCGAGCTTCTC
GACAGCGATCGGCAACCCACCCGTGCCTCTCCAACTCTTTCTTTATTCTCGCCATTCCGG------GGTTTTCATGCGCG
GGCGGTCGACGCCGGCCAGCAAATTTAATCTTCTTCCC-------CTTCCCCTTACGTGAGTTCCCGGCTGACCCGA---
---GAT-TGTTTCAACGCTTCCTGAG-AGCTGCCTCCCCTCGTCACGACCAAGCAACCTACTTG---------------C
GGCTCTTCTCCTCCCGTCCGGCCGGATGGCATTGGACGTGCTCGTCAGGCTGCTGATCCTCGCGGCCGTCGCGAGCGCCA
TGCCGGTGCCGGGCGCCGCGGATCCCGCCGGCGCCGGGCTCGCCATCGGGTTCTACGACAAGAGGTGCCCGAAAGCGGAG
GAGCTGGTGCTCGAGGAGATGCGGGACATCGTCCACGAGGACAGGACCCTCGGCCCGGCGCTGCTGCGGCTTCTCTTCCA
CGACTGCTTCGTCAGGGTGCGCATTGCGCTGCTTTCTT----TGCCGTGCCGCGTCGCGTGCACGGGCCGTCTGAATGTG
TTTTGCTTAACCTGAACTGGATGCGTGATCTGCAGGGGTGTGACGGGTCGATCATGCTGAAATCGAGGAGCAAGAAGGGG
GAGAGGGACGCCAAGCCCATGAGCTACAGCCTCCGCGGCTTCGACGAGGTCGAGAGGATCAAGGCCAAGCTGGAGGACGA
GTGCCCGCTGACCGTGTCGTGCGCAGACATCATCATCATGGCCGCGCGGGACGCCGTGTACCTGGTAATTTAAGCAGATC
GATAATCCCCCCTTTCATGGCAA-CCATGGATTTTCTCAAGCTTTCTTTTTAGCTGACCAAACTGCCTCGTTG-------
TTCCAGACCAACGGGCCACGGTTCCCGGTGGAGACCGGACGCCGGGACGGCAAGGTGTCCTCATGCCTCGACGCCGAGAA
CGACCTGGCGCCGCCGAACGCCAACATTGTGGACCTGAAGACCTACTTCAGCGTGAAGAACCTGTCGTGGAAGGACCTCG
TCGTCTTGTCAGGGAGCCACACGATCGGGAGGGCGCAGTGCAACGCGTTCGCGCCGGACCGGCTCTACAACAACAGCGGC
AAAGGGGTGCAGGACCCGACGCTGGACAAGGCGTACGCTCCGGAGCTGCGGGAGAGGTGCGAGCCAGGCAACGAGAAAGA
CGAGACGCCCGTGGACATGGACCCCAAGAGCCCCTACGAGTTCGACCTCAGCTACTACCGGGACGTGCTCAGCAACAGGA
CCCTGTTCGTCTCCGACCAGGCGCTGCTCGACGACAAGTTGACGAGGGACTACGTGGCGAGGATGGCGGCCGCCGAGTCG
ACGGAGGAGTACTTCCATGACTACGCCACCGCCATGATCAACATGGGCAGGATGGAGGTGCTCACCGGCGACAACGGGGA
GATCAGGAAAATCTGCAGCGCGTACGTTCACTAATCGACCCGGTGGTTGGTCGATGTGAGTTGGTGGCTTGGTGCAAGTG
CTTCGTCATGTGGACGGGGTCACGACGGCCGGTGTGGCCGCCAGCCGCAAGGCACTTGCATTATTCTAGGGGTGGTTAGA
GAATTG--------ACACCGCCACGCGGCGAATCTTCCTCTGTTTGTATGTAAAAAAAGTCGTCTCTTTGTTCTTGACCG
AGTGCCCTTTGAGATTTGGCGAGTTGTAATTATATTTTTTTCGCTTAATTAACTAGTCACCTGCAGAAAGTATGAATACA
TTGCTGAGAGTATTTCAATCAGAGCCATCGGTAGCTTAAGGCCCTGTTTGGTTCATAAGTCCTAAGACTTTTTTAGTCCC
AATTTATACGTCTCAAGTACCTAAAAAGTCCCTACATGTTTGGTTCCTGAGACTTAACATGGACTAGAAGGCCAATTACA
ACTATAAGTCCCTATAAGTCCCTCCTTGAGAGTCTTATTTCATAAGTCCCAAATGCCCACTTTAAGTCCCTATAAATCCC
TCCTGTTTGGTTTAGATGGGACTTATATAGACTTTTTTAAGTCCCTAAATCAATAAGTCCGTGGAAACAAACACCCTCTA
ACTTAAGTGAGAGATTATCTTTTGAGAGATT-AAGTGCTACTAGTATCTAACAGATCCTACCCGCAAAAAAAAAG-----
----TATCTAACAGATCCCTCAAACGTTTAGTTTCTTAAAAATATGGATTTTGATTCCTTAAAACTCAACCTCCAAGCCT
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------------ATTTTTCTCTTGGAAAGCCACTTCTCGGTAAAAATGAGAA-TGAACAGTGCCGCACGTGGGCCGTGGG
CCGTGGCCACTGCTG------------CCGCCGCCTGTGGGGCCTTCCGACAGCCTCGCCTCCCTCCAACCACCGCCTTG
GGTGAGATTCCAGTAAACATATTTTTACGTTTTTT-----------CGTCGTCTCCGGCCACGGCGACGCTTCTCCTCGG
CGTCCCTGGCCTGGCAGCGCTCGTTCGTGTCATTCCCGGCAACAAGCA
>chr3A_1
ACAAATAAATCGCAAATCTTATAACTATTGCACGTAACGTAATAAATATGTAGCCTATGC-TGATTCCCGAAATAAATTG
TAACTCAACCCAACCAAGCACATTCCCCTCCAGCATACAAATAAACTAAGGAGGTTGGGGAGTGGATGTACAAACCCAAC
ACCCAGGTTCAAATCCTCACGGAGGCGAATTTAGGTTCCTATTTATTCTTGGAGACTAGGCTCTCCTGGTACTCACACAT
TTATCATTGAGGACTACGCTCAATGCGTAACCGAGATTAAAAATCCTAGTACTCATACTTAAAAGGCCGTATGAATCCCT
AGTTGGTGCAGAGGCCGGGGAAGTGAAATTCTCCCCCAATTTAAGGTATGTAGATCCACAAGAGATCTCTCCTCCCAACC
CTAGCCGCCCCACCTCCTCACTCCCCCTCTTCCCTTCCTGGCCGCCGCCTGAGGCAGCCGTCGGGCAAGCCCTAGGCGCC
AAGGATGGTGGCAGCGGGGCCTAGGTTGCCCTGCTTCTGCGTGGGGAACCCCGGATCTAGAGCGGCGGCTCCATTGGCAA
GGCACGGCCGGCTAGCAGACGTGTGGGCGGTGGATCTGGTGCCCCGGCCGCGCGGGTGGCGGGATCCGGTGATCGTTGGC
GGCCGGCTGCGGCTTCTATGGCGATCGGTGCGCGCGATCTGGCGCCTTCCCTCCCCTGTTCGGCGTGCGGGCCAGCCTGG
TCGAGCCGCGCTTCCTCTTGGTTGCCGGTTCTGTACAGGAGGCATTGCTGGTGACGGGGACTGATAACCCACAAGTATAG
GGGATCGCAACAGTTTTCGAGGGTAGAGTATTCAACCCAAATTTATAGATTCGACACAAGGGGAGCCAAAGAATATTTGA
AGGTATTAGCAGCTGAGTTATAAATTCAACCACACTTGGAGATTAATTATCTGCAGCAACGTGATTAGTAGCAAAGTAAT
ATGATAGTTTTGATAGTGGTGACAGTAGCAATAGTAACGGTAATAGTGATAGCAGTAATTTCATAGCAAGTGTAACAATG
ATGATAGCAGTAGTAACTTAGCAAGAACAATATAAGATAAATCCGTAGGCATTGGATCGGTGACTTGTTGGATGATATTC
ATCATGAGACAATTATAACCTAGGGCGATATGGCACTAGCTCCAGTTCGTCAATATAATATAGGCATGTATTTAGTAATA
GTCATACGTGCTTATGGAAAGAACTTGCATGACATCTTTGAGCATTGATATACGGACGACACCTCGGGACGATTTCAAGA
TGACACAACATATCCCACTGTCCATTGGAAAGGCAGAACTGCACAACACCGTTGGATAAGCCATCGTCCTAGAATCATGA
TAGCAATTGTCGTGTGTGAAGTAATTTCAGACATATTTTGTCCTACCCTCCCGTGGCAGCGGGGTCCATATTGGAAACTA
AGGGATATTAAGGTCTCCTTTTAATAGAGAACCGGAACAAAGCATTAACACACGGTGAATACATGAACTCCTCAAACTAC
GGTCATCACCGGGAGTGGTACCGGCTATTGTCACTCCGAGGTTGCCGGATCATAACACGTCGTAGGTGACTATAACTTGC
AAGATCAGATCTAGAACATGGATATAATGGTGATAACATAAACGGTTCAGATCTGAAATCATGGCACCCGGGCCCAAAGT
GACAAGCATTAAGCATGGCAAAGTCATAACAATATCAATCTTAGAAAATAGTGGATACTAGGGATCAAGCCCTAACAAAA
ATAACTCGATTACATGATGAATCTCATCCAACCCTCACCGACCATCGAGCCTATGAAGGATCTCACTTCCGGTGGGGAGC
ATCATGGAATTGGCGATGAAGAAGGATAGGTGATGACGAAGAACAAAGATCCCCTCTCTGGAGCCCCAAACGGACTCCAG
ATCTAGCCTCCCCAAGAAGAACAGGAGGTGACGACGGCTCCGTCTCGTGGATCATGATAATTCTTTCTCTCTGATTTTTT
TCTGGAAAAATAGGATTTTATAGCATTGGTTTCAGGGTCTGCGGGGCCACCAGGTGGGCACAACCCACCTGGGCACGCCA
GGAGAGGGGGGCGCACCCTGGTGGGTTGTGCTCACCCAGGTGCCCTCCTCTGGTGGGTCTTGACTCCAGAAATTCTTATT
ATTGATCTAAAAAATCCTCGCAAAGTTTTGTTCCATTCCGAGAACTTTTATTTCTGCACAAAAACAACACCATGGTAGTT
CTGCTGGAAACAGCGTCAGTCCGGGGTTAGTTTCATTCAAATCATGTAAATTAGAGTCCAAAACAAAAGGAAAAGCGTTA
GGAAAAGTACATACGTTGGAGACGTATCAGGGACCTAGTTCGGGCGAAACCCCTGGCCGGCCATGACCGGCCACGCCAAC
GGCGCCGCCTGAGGGCGCCGTTCCTCTTCTTGAAGGCGTCGGTATGGACTGATCTCCTCAATTCACCTTCCCCTGGGTCT
CCCGGGCGAAAGACCTAACTTTGTTGGGCAGCGGCGGCGCTCTTCCCTTCTTGAAGGCGCCGCTTTGGGAACCTTGGGGT
TGGGTGGCGCTTGTGGGTGGTGGGCGACGGCGGTGGTGCGGCCCTATCCTAGCATGGATTTATGTCTGTTGCTTGGAGAT
GGACTCGCGTAGGTGGAGGTCGTCGGCTGGCGTCGTGGTGGCGTCAATGATGGAGGACTTGCCAAGGCTCGCGTAGGTGG
AGGTCGTCGTTTGACGTCGTGGTGGCATCGATGGCGGAGGACCTGCCAAGGTTGTCACCTCAATCTGCTTCGAAGATGGA
CGAGTGGAAGATGGCGGCGACGACACATGTGAGTGCGTCGAACCGGTTTGTGCCCTGGACCCGGCAGATGGCTCGATCGG
GGCCTCTGTCTTTAGATGTTAGGATTAGGTGAGAGGTCTGGATATGTGGCCTAGCTTGCACCCCTTTATCATTTGGATAC
GAGTAGCGGTAGATGTTGCCAAGATGGCGAATTTAGGCATATTGTTGTTCTACTTTGTAAGGTCCTCGAGAATAATCAAT
AAAATAGCCGCATACATTTCTCAGATGCAGAGGTCGGGGGTCATCCTTCTTTTTTTTAAAAAAAAAAGAAGTAT---GGC
CGTCTGTTTCTACTATTGGGTTCCGTTAAACACAGCACTGTGCTTTGACCTTGACAAGTTCTAGTTTGCGTAAACAGCGA
TAACCGGCAGGTGGAGTAGCTTACCACGAAGAAGCGTATGCCTCCGCAGCCTGTCCTCCGCCCGTGCTACACGCCAACTG
CCCCTGGTCAGCACAGCCACCAGAGACCAGTTAAAATGCATGCGCCTGAATATTTGTTTGTTCATTTGGTCAGCTCACTT
CCCATTAGATGCTTTTATGCCTCTACAAATGCATCGATCGGTTCGTCAATCTTGCCTTCATATATGCACTGCCATGTTCA
ACTATTCATCGATGTGCAGAAAAGCTATCTCGTAGTCGGCCGAGTATGGCGTGTGAACAGCGTGCGTTGACAAGCGCAAA
AGCCCGCATCCACGACCGCCATCCAGTCCAGACGCGGAACCAATCTGCTCGGCGCACTCGCGCC------TCCAGTCCAG
TCTCATGCGCCGCGTGAAATGGGGGGAATTTTTGTTTCCTTCTGCT-CGCCTTTGCGCGTAGCCTCCAACACCCCATTCC
CGTTCCC----------AGCTGTGCTAGCCAGCCATTGTCCGCCTCAGTTTTTAACTAACTTGCGAATTCCGAGCTTCTC
GACAGCGATCGCCAACCCACCCGTGCCTCTCCAACTCTTTCTTTATTCTCGCCATTCCGGCTCCGGGGTTTTCATGCTCG
GGCGGTCGACGCCGGCCAGCAAATTTAATCTCCTTCTCTTGATCTCTTCCCCTTCCGTGAGTTCCCGGCTGACCCGA---
---GTTAAGTTTCAACGCCTCCTGAGCAGCTGCTTCCCCCCGTCACGACCAAGCAACCTCGCTCGTCGACGACTCGATTC
GGCTCTGTTCCTCCGGTCCGGCCGGATGGCATTGGACGTGCTCCTCAGGCTGCTGATCCTCGCGGCCGTCGCGAGCGCCA
TGCCGGTGCCGGGCCCCACGGACCCCGCCGCCGCCGGGCTCGCCATCGGGTTCTACAACAAGACGTGCCCGAAAGCGGAG
GAGCTGGTGCTGGAGGAGATGCGGGACATCGTCCACGAGGACCGGACCCTCGGCCCGGCGCTGCTGCGGCTTCTCTTCCA
CGACTGCTTCGTCAGGGTGCGTGCTGCGCTGCTTCTTTGCCGTGCCGTGCCGCGTCGCGTGCACGGGTCGTCTGAATGTG
TTTCGCTTAACTTGAACTGGATGCGTGGTCTGCAGGGGTGCGACGGGTCGATCATGCTGAAATCGAGGAGCAAGAAGGGG
GAGAGGGACGCCATGCCGATGAGCTACAGCCTCCGCGGCTTCGATGAGGTCGAGAGGATCAAGGCGAAGCTGGAGGACGA
GTGCCCGCTCACCGTGTCCTGCGCAGACATCATCATCATGGCCGCGCGGGACGCCGTGTACCTGGTAATTTAAGCAGATC
AATAATCCCCCCTTTCATGTC-CTCCATGGATTTTCTCAGGCTTTCATTTTAGCTGACCACCAGACTGCCTCCTTGTTTC
TTCCAGAGCAACGGGCCACGGTTCCCGGTGGAGACCGGGCGCCGGGACGGCAAGGTGTCCCTGTGCATCGACGCCGAGAA
CGACCTGGCGCCGCCGCACGCCAACATCGTGGACCTGAAAACCTACTTCAGCGTGAAGAACCTGTCGTGGAAGGACCTGG
TGGTGCTGTCGGGGAGCCACACGATCGGGAGGGCGCAGTGCGCGGCGTTCGCGCCGGACCGGCTCTACAACAACAGCGGC
CTAGGGGTGCAGGACCCGACGCTGGACAAGGCGTACGCCCCGGAGCTGCGGGAGAGGTGCGAGCCAGGGAACAAGGAAGA
CGAAACGCTCGTCGACATGGACCCCAAGAGCCCCTACGAGTTCGACCTCAGCTACTACCGGGACGTGCTCAGCAACAAGA
CCCTGTTCGTCTCCGACCAGGCGCTGCTCGACGACAGGTGGACGAGGGACTACGTGGCGAGGATGGCGGCCGCCGAGTCG
ACGGAGGAGTACTTCGAGGACTACGCCGCCGCCATGATCAACATGGGCAGGATGGAGGTGCTCACCGGCGGCAACGGGGA
GATCAGGAAATTCTGCAGCGCGTACGTTGACTAATGGAGCCGGCGGTTGGTCGATGTGAGTTGGTGCGCGTGCCTCCATC
GATCGTCATGTGGACGGGGTCACGACGGCCGGTGTGCCCGCCAGCCGCAAGGCACTTGCATTATTCTAGGGGTGGTTAGA
GAATTGACACCGTCACACCGCCACGCGGCGAATCTTCCGGTGTATGTA---AAAAAAAGTCGTCTCTTTGTTCTTGACCG
AGTGCCCATTGAGATTTGGCGAGCTGTAATTATAATTTTTCTCCTTAATTAACTAGTTACTTGCAGAAAGTATGAATACA
TTGCTAAGAGTATTTCTAGCAGAGCCCTCGATAGCTTAA-----------------------------------------
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-TTTAAGGGGGAAATTATCTTTTGAGGGATTTAAGTGCTACTCCTATCTAAGTT----------CAAAAAAAAAGTGCTA
CTTCTATCTAACAGATCCCTCAAATGTTTAGTTTCTTAAAATCATGGATTTTGATTCCTCAAAGCTCAACCTCCTAGCCT
ATTTTTATGAAGAATGTCATACGAAAACCAATATTCAATAAAAACTTCGTGAAAACCACATTTTAAAGTTTCGAAAAAAA
TCTAAAGAAAATGCGGGATGTTAAGGGTATGTACAATGGTGGCATATAGATACATATGTCCCATGACAAAAAGTAATTTG
AGGCACTTATATTAATTTTTTCTCTCCAATGCAAGCTATCACTAGTGGGCCTCATTAAGAAATAGAAAATAAAGACTCTA
GTACACATGCATCTCTATTTTTCACTCCAACCTTTTCAGCTTTTGTTATCGGACCACACTTTTTCTCTTCAAGCAACCGC
CTCGTAGAGAGGATCCCGCTTCCTTATCCGAACCTACTTTACATCATATCCGATCCCATGGCATGCGAGGTATCATCTTG
AGGCTATGCATTGTACATGCCCTAAGAGGGTGATGTTTTATGGCCACATAAAATTTCAAGTTGAAACACATTAGGGCATG
TACAATGGTGGCATATGGATACATATGCCCCATGACAAAAAGTAATTTGAGGCATCTACATTTATTTTTTCTCCCCAATG
CAAGCTACTACTAGTGGGCCTCATTAAGAAATAGAAAATAAGGACTTTAGTACACATGCATCTCTACTTTTCATTCAATC
TTTTCAGCTTTTGTCACCGGACCACACTTTTTCTCTTCAAGCACCCGCCTCCTAAAAAGGATCCCGCTTCCCTATCCGAA
CCTACTTTACGTCATATCCGATCCTACATGGCATGCGAGGCATCACCTTAAGGTTATGCATTGTACATGCCCTTACGAGA
CGTGATCTATGAAAAAGACAAAATCAGCCCTGAATAGTGCCGACAAACTGTTTAGCACTATTCAGTGCTGATTTTGTCTT
TTTCATAGGTCGCATCTTGTAATGTGTTTCAACTTGAAATTTAGCGTGGCAATAAAACATCATCCTCTTAACATCCCGTA
TTTATTTCAGTTTTTTTTAAACTTCAAAACATATTTTCCTTGTGGTTTTTACCGGTTTCAATCGAATGTTGGTTTCCGTA
TGATATTTTCCCATTTTTCTGTAGGAAAGCCACTTCTCGGTAAAAATGAGAAATGAATAGTGTCGCACGTGGGCCATGGA
CACTGCCACCGCCACCCATCTCGGTGCCCACTGCCTGTGGCGCCTTCCCTCAGCCCCGCCTCCCTCCCACCACCATCTTT
GGTGAGATTCCGGTGAACTTATTTTTTTCCTTTTTTTCGTCCTATACGTCGTCTCCAGCCACGACAACGCTTCTCCTCGA
TGCCCGGGCCCGGCAG----TGCTCCTCGTCGTTCCCAACAACGAGCA
>chr3D_15
--------------AATCTTATACCTATTCCGTGTAACATAATAAATAGGTAGCCTCTTCTTGATTGCTAAACTAAATTG
TAACTCGATTCAACCAAGGACATTTCCCTCCAGCATACAAATAAAGTAAGGAACAAATC---------------------
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--------------------------------------------------------------------AAGTATGGTGGC
CGTCAGATTTTAGAACTGGGTTCTGTTAAAAACAGTACTGTACTTTGACCTTGACAAGTCCTAGTTTGCGTAAACGGCGA
TAACCGGCAGGTGGAGTAGCTCACCACGAAGAACTGTATGCCTGCACAGCCTGTCC--------------------ACTA
CCCCTGGTCAGCACATCCACCAGAGACCAGTTAAAATGCATGCGCCTGAATATTTGTTTGTTCATTTGGTCAGCTCATTT
TCCATTAGATGCTCGCATACCTCTACAAATGCATCGATCGGTTCGTTAATATTGCCTTCATATATGCACTGCCATGTTCA
ACTGTTCATGGATGTGCAGAAAAGCTATCTCGCAGTCGGCCGAG----GCGTGTGAACGGCGTGCGTTGACAAGTGCAAA
AGCCCGCATCCACGACCGCCGTCCAGTCCAGACGCGGAACCAATCTGCTCGGCGCACTCGCGCCCCCTGGTCCAGTCTCA
TCTCATGTGCCGCGTGAAATGGGGG-AATTTTTGTTCCGTTCTGCTCCGCCTTTGCGCGTAGCCTCCAACACCCCATTCC
CATTCCC----------A-----GCTAGCCAGCCATTGTCCGCCTCAGTTTTTAACTAACTTGCGAATTCCGAGCTTCTC
GACAGCGATCGCCAACCCACCCGTGCCTCTCCAACTCTTTCTTTATTCTCGCCATTCCGG------GGTTTTCATGCGCG
GGCGGTCGACGCCGGCCAGCAAATTTAA------TCTC-------CTTCCCCTTCCGCGAGTTCCCGGCTGACCCGAAGC
CGAGAT-AGTTTCAACGCTTCTTGAGCTTCTGCTTCCCCTCGTCACGACCAAGCAACCTCG----TCGACAACTCGATTC
GGCTCTGTTCCTCCGGTCCGGCCGGATGGCATTGGACGTGCTCCTCAGGCTGCTGATCCTCGCGGCCGTCGCGAGCGCCA
TGCCGATGCCGGGCGCCGCGGATCCCGCCGGCGCCGGGCTCGCCATCGGGTTCTACGACAAGACGTGCCCGAAAGCCGAG
GAGCTGGTGCTCGAGGAGATGCGGGACATCGTCCACGAGGACAGGACCCTCGGCCCGGCGCTGCTGCGGCTTCTCTTCCA
CGACTGCTTCGTCAGGGTGCGTGTTGCGCTGCTCT-TT----TGCCGTGCCGCGTCGCGTGCACGAGCCGTCTGGATATG
TTTTGCTTAACCTGAACTGGATGCGTGGTTTGCAGGGGTGCGACGGGTCGATCATGCTGAAATCGAGGAGCAAGAAGGGG
GAGAGGGACGCCAAGCCCATGAGCTACAGCCTCCGCGGCTTCCACGAGGTCGAGAGGATCAAGGCCAAGCTGGAGGACGA
GTGCCCGCTCACCGTCTCCTGCGCAGACATCATCATCATGGCCGCGCGGGATGCCGTGTACCTGGTAATTCAAGCAGATC
GATAATCCCCCCCCTTCATCGGCTCCATGGATTTTCTCAAGCTTTCTTGTTACCTGACCAAACCGCCTCCTTG-------
TTCCAGACCAACGGGCCACGGTTCCCGGTGGAGACCGGACGCCGGGACGGCAAGGTGTCGTCGTGCGTCGACGCCGAGAA
CGACCTGGCGCCGCCGAACGCCAACATTGTGGACCTCAAGACCTACTTCAGCGTGAAGAACCTGTCGTGGAAGGACCTTG
TCGTGCTGTCGGGGAGCCACACGATCGGGAGGGCGCAGTGCAACGCGTTCGCGCCGGACCGGCTCTACAACAACAGCGGC
AAAGGGGTGCAGGACCCGACGCTGGACAAGGCGTACGCACCGGAGCTGCGGGAGAGGTGCGAGCCAGGCAACGAGAAAGA
CGAGACGCGCGTGGACATGGACCCCAAGAGCCCCTACGAGTTCGACCTCAGCTACTACCGGGACGTGCTCAGCAACAGGA
CTCTCTTCGTCTCCGACCAGGCGCTGCTCGACGACAAGTTGACGAGGGACTACGTGGCGAGGATGGCGGCCGCCGAGTCG
ACGGAGGAGTACTTCCATGACTACGCCGCCGCCATGATCAACATGGGCAGGATGGAGGTGCTCACCGGCGACAACGGGGA
GATCAGGAAAATCTGCAGCGCGTACGTTGACTAATCGACCCGGTGGTTGGTCGATGTGAGTTGGTGGCTTGGTGCAAGTG
TTTCGTCATGTGGACGGGGTCACGACGGCCGGTGTGGCCGCCAGCCGCAAGGCACTTGCATTATTCTAGGGGTGGTTAGA
GAATTG--------ACACCGCCACGCGGCGAATCTTCCTCTGTTTGTATGT-AAAAAAGTCATCTCTTTGTTCTTGACCG
AGTGCCCTTTGAGATTTGGCGAGTTGCAATTATATTTTTTTCGCTTAATTAACTAGTCACCTGCAGAAAGTATGAATACA
TTGCTGAGAGTATTTCAATCAGAGCCCTCGGTAGCTTAA-----------------------------------------
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-CTTAAGTGAGAGATTATCTTTTGAGGGATT-AAGTGCTACTAGTATCTAACAGATCCTACCCGCAAA-AAAAAG-----
----TATCTAACAGATCCCTCAAATGTTTAGTTTCTTAAAAATATGGATTTTGATTCCTTAAAACTCAACCTCCAAGCCT
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------------ATTTTTCTCTAGGAAAGTCACTTCTCGGTAAAAATGAGAA-TGAACAGTGCCGCGCGTGGGCCGTGGG
CCGTGGCCACTGTTG------------CCGCCTCATGTGGGGCCTTCCGACAGCCTCGCCTCCCTCCAACCACCGCCTTC
GGTGAGATTCTAGTAAACATATTTTACGTTTTC-T-----------CGTCGTCTCCGACCACGGCGACGCTTCTCCTCGG
CGTCC----CCTAGCAACGCTCCTTCGTGTCGTTCCCGGCAACAAG--
>SNPs
-------------S-----------------------------------------S------------------------
----S---------------------------------------------------------------------------
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-------------S--------------------S------S--------------------------------------
----S--------------------------------------------------S------------------------
--------------S-----------------------S-S-------S-------------------------------
---------------------------------------------S-------------------S--------------
----------------------------S---------------------------------------------------
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---------------------------SS---------------------------------------S-----------
-------SSSSSSSSSS---------------------------------------------------------------
-----------S--------------------------------------------------------------------
-------------------------------S----S-----------------S-------------------------
-------S-------------------------S-------------------------SSS-S----------------
------SS------S----------------------------S------------------------------------
---------------------------------------------------------------S----------------
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---------------------SS------------S--------------------------------------------
---------------------------S------------S---------------------------------------
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---------S--------S-------------------------------------------------------------
-------------------S-SS----------------------------------------S-----S----------
--------------------------------------------------------------S---S-------------
------------------------------------------------------------------------------S-
----SS----S---------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------S-----------------------------------------------------------------------
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---------------------------S----------------------------------------------------
----------------------------S---------------------------------------------------
S-------------------------------------------------------------------------------
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--------------------------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S-------------------------S-----------------------------------------------------
------------------------S-------------------------------------------------------
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----------------------S---------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------SSS---------------------------------------------------
-----SS-S-------S-----S--------S----------------
>forward_3694
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--------------------------------------------------------------------------CATTCC
CATTCCCGTTCCCA------------------------------------------------------------------
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------------------------------------------------
>reverse_5547
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--------------------------ATCGGTAGCTTAAGGCCCTG----------------------------------
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------------------------------------------------
