>input_sequence_57819
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-----------------------------------------------------------------ATGGGTCGCTCGCCT
CGACGACGCCGGGCGATGGCGGCGGCGCCTCGCGATCCGGGGAAAAACCCTAGGGGGGTCCTCCCCGGCGACCGCATCTT
CGCCTCGGTGGCCCCCTACATCACCTTCGCCGACCACCTCCGCCTCCGCCTCGTCTGCCGCGCGTGGCGCTTCTTCTCCC
GCCGCCTCGGCCGCCGCCCGCCGCCCTTCCCGTGGCTCATGCTCCCGGAGCCGGCCTCCGCCTCGCAGTCCGCGCC----
--CGCGCCGGCCAACGTGCGCCGCCAGTTCTACGACATCCCCGGGGGGCGGCCCTACGCGTACGATGTCCCGGGGGAGGG
CTACCATCGCTGCGTCGCGTCCTCCGCCTGCGGGTGGCTCGTGTTCGTCTCCCTGGACGCGCCGCGCCGCCTCGTCCTCG
CCAACCCGGTCGCCGGCGCGCGGCTGGTCCTGTCCTGGCCGTTCAAGGAGAAGAACGCCGAAGGGCGATTCCACGCCGCG
CTCACGTCGTCGCCGGCTGACCGCCGGGCGTGCTTCCTCATCCTCGCCACGGACAGGCTCGTCGCCTACTGCCACCCCGG
CCAGCAGGACCAGGGGTGGCTCACCCTGCACGCCCCGGGGTTCCGCTACGACCCGGCCGCCAGCGACATGGTCACCGTCG
GCGCCATGGTGTACCTGGTCGACGGCAGGAGGAAGGTCTGGCGCGCGGACCTCGCGGACCCGGAGCCCAAGGTGGAGCGC
CGGAACACGGCGTGCCAGCTCCCGTTCGGCGAGAGCAGCATGCGCCACTACCTCGTGGAGTCGCTCCGGCACGTCCACCT
CGTGCTCGCGGACGAGCACAACGCGCGCGTCGCGCTCTTCAGGCTGGACTGGGACAAGAAGGTGTGGACGCAGGACCGCG
TGCGCGGGGACCGTGTCCTGCTTTTGGGCCGCGGGTGCTCGGCCTCTGTGCCGGCGGCGTCGGGCCGGCCGCCTGGCATG
CTGTTGTTCGCGCACCAGCCGTCGTTGAGTCTCGTTGACGTGGGCGGTTGTGGCGTTGGGCTCGCGTGGTTCTGGGCGGA
ATCGTGGGTGGATGAAGGCTCGGATGATAAGCTGGTGCTGAAGAAGAAGATGCACCACCGGCAAGGCGAGTTCACCGCTG
GTGACTCGTTCTGGTTCTTCCCGGCCATCGATCCGGATGAAAGGGCTATGTTTGCATCGCAGGCCTAG------------
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>chr1A_1_TraesCS1A01G208800
CACTGGTAGGTACCATTTGGGACTATCATCATGTTTAATCACAAGAGGTTCCTTGTGTGCGGACGCATGTGAGGATTCAG
GGTGGTGATCAAAAAAGATTACCGCT---CCTTTAATAGGATCGGTTGTAGAGTTTAACTTCACCGCAGTCAGTGACTCG
AGGTAGCTAAATAAGAACGTTTGTGATATTTATAGTGGTGGCGCGGGTTTTTCATGCACCACTTCATTTCGATCATGC--
------CTAAACAGTCACCAGCCTATCAATACGAACCAAAAGGTTCAAGGACCA-AAGAAGCCATGCTCTAACTGTATGT
TGGACATCAACAAAAGCACATGTAATCTCCATACTTCAGACATTTTCAACCACAAAGACACAACCATAGATCATCTACAT
AA--------------------------------------------TGCATGAAAAGCATTCTCTGGTTCCAAATCATAA
ACTGGACATGTGCTTGAAACCTCCAACCCTCTCAAATGTTTGTTTTGCCATGTAGTTAACGAATATGTAGCAACTCTTCA
AGCAAAATTTTGAATTGTTGGTGGGGCA-TAGCTCACCAAATCAGTATGATCATCGTTTATCGGGGTTATGTAACATTAC
CCCTGTTTCAATGAAAGGAGGACGCTCAGCCGTTGGATGGCATCAGAGCTAACGGGTCGCGAGCAATG------------
---------TTTTGGACGCAAATGAGAACCGAAAACGCTC-------------------------ATAATTGGTTTCCCC
CTATGTTTTGCTACTACGAATTGCAGAGATT--TAAATCAAATTATGGCATCAATCACTGGGAACCGAAAGCTGAAGCTG
AAGACGCGGCAGGCGATAGGATGCATTAACTGGTAAATATTCTGGATCAATACTAGTAAGATTTTCTTTAAACAAGCCCA
AATCTGACGAAATAAATCCGATGCATTTATGGGCATTGCGGCGCCAGATCATACATAAATCGTTGCGGCGCGTGCGCTTC
CCGGAGACCAATCGATCGATCGATCGAGCCAACCAACCAGCCAACCGGCCCGCCTCTTGCGTTGCATGGGTCGCTCGCCT
CGACGACGCCGGGCGATGGCGGCGGCGCCTCGCGATCCGGGGAAAAACCCTAGGGGGGTCCTCCCCGGCGACCGCATCTT
CGCCTCGGTGGCCCCCTACATCACCTTCGCCGACCACCTCCGCCTCCGCCTCGTCTGCCGCGCGTGGCGCTTCTTCTCCC
GCCGCCTCGGCCGCCGCCCGCCGCCCTTCCCGTGGCTCATGCTCCCGGAGCCGGCCTCCGCCTCGCAGTCCGCGCC----
--CGCGCCGGCCAACGTGCGCCGCCAGTTCTACGACATCCCCGGGGGGCGGCCCTACGCGTACGATGTCCCGGGGGAGGG
CTACCATCGCTGCGTCGCGTCCTCCGCCTGCGGGTGGCTCGTGTTCGTCTCCCTGGACGCGCCGCGCCGCCTCGTCCTCG
CCAACCCGGTCGCCGGCGCGCGGCTGGTCCTGTCCTGGCCGTTCAAGGAGAAGAACGCCGAAGGGCGATTCCACGCCGCG
CTCACGTCGTCGCCGGCTGACCGCCGGGCGTGCTTCCTCATCCTCGCCACGGACAGGCTCGTCGCCTACTGCCACCCCGG
CCAGCAGGACCAGGGGTGGCTCACCCTGCACGCCCCGGGGTTCCGCTACGACCCGGCCGCCAGCGACATGGTCACCGTCG
GCGCCATGGTGTACCTGGTCGACGGCAGGAGGAAGGTCTGGCGCGCGGACCTCGCGGACCCGGAGCCCAAGGTGGAGCGC
CGGAACACGGCGTGCCAGCTCCCGTTCGGCGAGAGCAGCATGCGCCACTACCTCGTGGAGTCGCTCCGGCACGTCCACCT
CGTGCTCGCGGACGAGCACAACGCGCGCGTCGCGCTCTTCAGGCTGGACTGGGACAAGAAGGTGTGGACGCAGGACCGCG
TGCGCGGGGACCGTGTCCTGCTTTTGGGCCGCGGGTGCTCGGCCTCTGTGCCGGCGGCGTCGGGCCGGCCGCCTGGCATG
CTGTTGTTCGCGCACCAGCCGTCGTTGAGTCTCGTTGACGTGGGCGGTTGTGGCGTTGGGCTCGCGTGGTTCTGGGCGGA
ATCGTGGGTGGATGAAGGCTCGGATGATAAGCTGGTGCTGAAGAAGAAGATGCACCACCGGCAAGGCGAGTTCACCGCTG
GTGACTCGTTCTGGTTCTTCCCGGCCATCGATCCGGATGAAAGGGCTATGTTTGCATCGCAGGCCTAGCTAGTTGGAACA
TGAATTTCTTGCTTTTGGTAGGCTGGTTTGAACATCAATTACTGGACTAAGATATACTAGTGTAGAACCATGGGTTCTGT
GAAAGCTGCATCTTATTTCTGTTCGTTTTGTCTGAAGAAAATAGTAGTCCTAAAAGTTGCAGATATCTGAAAGCTCTGGT
TCTGCATCCTGTTCCTATATGATTCAAACGTGTTGCGATGCAACCAGCAATATATAAACGTAAGCAATCATTTATCGACA
AATGTTGATTGCACCATACCGGGGTGCGATGCGTGGCCATATACACGAAACGGTGAA---TTTTTTCATAATTCATTTTC
AGCTTTG--------------------------ATTCATAATATATCATTCTAATTTTAGAGGATTATATTTCTTTTTGA
AGGAAATATTTTAGAGGATTATACCTTTTCCTTCAAAATAGAGGATTATATTTCCTAGGAAGTTTTCATGTGTAGCTTGC
TTGGAGTGGAGAATTGTAAACCATAGACAGTTTTTT------T-TGTCTGTTTTTGCGGGTCAAACCATAGACAGTTTTC
TTATACTCCACTTTACTTGCAATTTTAAAGGAAAAAAATTCCATTCAGCCCAA-ATCATGCAAAATTTCACAACAACAAC
AATGGC--------------------------------------------------------------------------
-----------ATGTGCCATGAAATCCAATTTCCTAGTCCTATCATTTTAAGAACCAAAGAGGTGCACTTACAATGTAAT
AACATAGGATCCTTAGTTTGATGGAGTCTTTCCTGTTTTGATTGGAATCGGCTT--TGTTCTCATTTCCGAAACACCTAA
ATCCCCTATTTATATCATCGCAGAAGAATGGTAGGCCATATCCATTAACTGTTTTCTTTACTATAATTGCCATAATGGTA
TTTAAATTGACGGAATTTTAGAATCATTGGTAAAA------ATCTAAATAATCATGTGACATTTCTGCCTAAATACTCCC
TACAATTATTTAAATTGATGCACTTTTAAATCAGCTGGGATGTTTGAAGTAGAGTGATTCCCCCTGATGGAGTGCATC
>chr1D_1
CACTGGTGGGTACCATTTGGGACTATCATCGTGTTTAATCACAAAAGGTTCCCTGTGTGCAGACGCATGTGAGGATTCAG
AGTGGTGATCAAAAGAGATTGCCATTTCCCCTTTAATAGGATTGCTTGTAGAGTTTAACTTCACCGCAGTCAGTGACTCG
AGGTAGCTAAATAAGAACATTTGTGATATTTATAGTGATGGCGCAGGTTTATCATGCACCACTTCATTTCGATTATGCCA
GCAACGCTAAACGGTCACCAGCCTATCAATACGAACCAAA-GGTTCAAGGGCCA-AAGAAGCCATTCTCTAACTGTATGT
TGGACATCAACA--AGCACATGTAATCTCCAAACTTCAGACATTTTTAACTACAAAGACACAAACATAGATCATCTACAT
AA--------------------------------------------TGCTTGAAACCTCCAT------------------
--------------------------CCCTCTCAAATGTTTGTTTTGCCATGTAGTTAACGAATTTGTAGCAACTGTTCA
AGCAAAAATTTGAATCGTTGGTGGGGCATTAGCTCACCAAATCAGTATGATCATCGTCCATCGGGGTTATGTAACATTAC
CCCTGTTCCAATGGGAGGGGGGCGCTCAGCCGCTGGATGACATCAAAGCTGACGGGTCGCGAGCAATTTTTGAGATATAC
TGTACTTTATTTTGGACGCAAATGAGAACCGAAAACGCTC-------------------------ATAATTGGTTTTCCC
TTATGTTCTACTACTACGAATTGCAGAGATT--TAAATCAAATTATGGCATCAATCACTGGGAACCGAAAGCTGAAGCTG
AAGACGCCGCAGGCGATAGGATGCATTAACTGGTAAATATTCTGGATCAATAC---TAAGATTTCCTTTAAACAAGCCCA
AATCTGACGAAATAAATCCGATGCATTTATGTGCATTGCGGCGCCAGATCATACATAAATCGTTGCGGCGCGTGCGCTTC
CCGGAGACCAATCGAT----CGATCGAGCCAACCAACCAGCCAACCGGCCCGCCTCTTGCGTTGCATGGGTCGCTCGCCT
CGACGACGCCGGGCGATGGCGGCGGCGCCTAGCGATCCGGGGAAAAACCCTAGGGGGGTCCTCCCCGGCGACCGCATCTT
CGCCTCGCTGGCCCCCTACATCACCTTCGCCGACCACCTCCGCCTCCGCATCGTCTGCCGCGCGTGGCGCTTCTTCTCCC
GCCGCCTCGGCCGCCGCCCGCCGCCCTTCCCGTGGCTCATGCTCCCGGAGCCGGCCTCCGCGTCGCAGTCCGCGCC----
--CGCGCCGGCCAACGTGCGCCGCCAGTTCTACGACATCCCCGGAGGGCGGCCCTACGCGTACGATGTCCCGGGGGAGGG
CTACCACCGCTGCGTCGCCTCCTCCGCCTGCGGGTGGCTCGTGTTCGTCTCCGTGGACGCGCCCCGCCGCCTCGTCCTCG
CGAACCCCGTCGCCGGCGCGCGGCTGGTTCTGTCGTGGCCGTTCAAGGAGAAGAACGCCGAAGGGCGATTCCACGCCGCG
CTGACGTCCTCGCCGGCTGACCGCCGGGCGTGCTTCCTCGTCCTCGCCACCGACAGGCTCGTCGCCTACTGCCGCCCCGG
CCAGCAGGACCAGGGGTGGCTCACCCTGCGCGCCCCGGGGTTCCGCTACGACCCGGCCGCCAGCGACATCGTCACCGTCG
GCGCCATGGTGTACCTGGTCGACGGCAGGAGGAAGGTCTGGCGCGCGGACCTCGTGGACCCGGAGCCCAAGGTGGAGCGC
CGGAACACGGCGTGCCAGCTCCCGTTCGGTGAGAGCAGCATGCGCCACTACCTCGTGGAGTCGCTCCGGCACGTCCACCT
CGTGCTCGCGGACGAGCACAACGCGCGCGTCGCGCTCTTCAGGCTGGACTGGGACAAGAAGATGTGGATGCAGGACCGCG
TGCGCGGGGACCGTGTCCTGCTTTTGGGCCGCGGGTGCTCGGCTTCTGTGCCGGCGGCGTCGGGCCGGCCGCCTGGCATG
CTTTTGTTCGCGCACCAGCCGTCGTTGAGTCTCGTTGACGTCGGCGGTTGTGGCGCTGGGCTCGCGTGGTTCTGGGCGGA
ATCGTGGGTGGATGACGGCTCGGATGATATGCTGGTGCTGAAGAAGAAAATGCACCACCGGCAAGGCGAGTTCACCGCCG
GTGACTCGTTCTGGTTCTTCCCGGCCATCGATCCGGATGAAAGGGCTATGGTTGCATCGCAGGCCTAGCTAGTTGGAACA
TGAAATTCTTGCTTCTGGTAGGCTGGTTTGAACCTCAATTACTGAACTAAGATAT---AGTGTAGAACCATGGGTTCTGT
GAAAGCTGCATCTTATTTCTGTTCGTTTTGTCTGAAGAAAACAGTAGTCCTAAAAGTTGCAGATATCTGAAAGCTCTGGT
TCTGCAGCCTGTTCCTATATGATTCAAATGAGTTGCGACGCAACCAGCAATATGTAT-------------TTTATCGACA
AATGTTGATTGCGCCAAACTGGGGTGTGATGCGTGGGCATATACACGAAACGGCGATTTTTTTTTTCATAATTCATTTTC
AGCTTTGCAGAATCCTAGCTAAGGGACTCTTTGATTCATAATATATCATTGGAATGTTGGAGGATTATATTTCT------
-------------------------------------------------------TAGGAAGTATTCATGTATAGCTTGC
TTGGGGTGGAGAACTGCACACCGTAGACAGTTTTTGTGTGTGTGTGTGTGTGTTTGCATGTCAAACCATAGACTGTTTTC
TTATAATCCACTTTACATGCAATTTTAAAGGC-AAAAATTCCATTCAGTCTAACATCATGCAAAATTTCACAATGGATTT
TTTCAGTTGTTTCAACAACAGCCATGGCATGTGCATGGAGTATTTGAGAAAGCATGCTTCTTTCATTTTTTTTCAGTTCT
TGTAGGATTAAATATGCCATGAAATCAAATTTCCCAGTCCTATCTTTTTAAGAACAAAAGAGGTGCACTTACAATGTAAT
AACGTCTGATCCTTAGTTGGATGGAGTCTTTGCTGTTTTGATCGGAATTGGCCACGTGTTCTCATTTCTGAAAGACCTAA
ACCCCCTATTTATATCGTCGCAGAAGAATGATAGGCCATATCCATTCACTTTTTT-TTGGCTATAATTGCCATAATGGTA
TTTAAATTGATGGAATTTTAGAATCACTGG----TAAAATTATCTAAATAGTCATGTGATATTTGTGCTGAAATACTCCC
TACAATTATTTAAA----------------------------------------------------------------
>chr1B_1
CACTGGTGGGTACCATTTGGGACTATCATCATGTTTAATCACAAGAGATTCTCTGTGTGCAGACGCATGTGAGGATTCAG
AGTGGTGACCGAAAGAGATTACCATTTCCCCTTTAATAGGACCGGATGTAGAGTTTAACTTCATCGCAATCAGTGACTCG
AGGTAGCTAAATAAGAACCTTTGTGATACTTCTAGTGGTGGCACATGTTTATCATGCGCCACTTCATTCCGATTATGCCA
GCAGCACTAAATAGTCATCAGCTTGTTGATATTAGCCAAA-GGTTCAAGGGCCAGAAGAAGCCATTCTCTACCTATATGT
CGAACATCAACA--AGC----------------------------------ACAAATACACGACCGTAGGACCTCTACAT
AATGCATAAATAGTGATGTCTGATTTCAAATCACAAATTAGACATGTGCTTGAAACCTCCGG------------------
--------------------------CCCTCTCAAATGTTTGTTTTGCGATGTAGTTAACGGATTTGTAGCAACTCTTCA
AGCAAAAATTTGAATCGTTGGTGGGGCATTAGCTGACCAAATTAGTATGATCATCGTCCATCAGGATTATGTAACACTAC
CTATGTTTCAATGGGAGGGGGGCGCTCAGCCGCTAGATGACATCAGAGCTGAAGGGTGGCGGGCAATTTTTTAGATATAT
TGTATTTTATGTT-GATGCAAATGAGAACCAAAAACGCTCCTTGCCATAGCCCGTTCAAACAGCCATAATTGGTTTCCCC
TTATGTTCTACTACCACGAATTGCAGATTTTTATAAATCAAATTATGACATCAATCACTGGGAACCGAAAGCTGAAGCTG
AAGACGCGGCAGGCGATAGGATGCATTAACTGGTAAATATTCTGGATCAATAC---TAAGATTTCCTTTAAATAAGCCCA
AATCTGATGAAATAAATCCGATGCATTTATGGGCATTGCGGCGCCAGATCATACATAAATCGTTGCGGCGCGTGCGCTTC
CCGGAGACCAATCGAT----CGATCGAGCCAACCAACCAGCCAACCGGCCCGCCTCTTGCGTTGCATGGGTCGCTCGCCT
CGACGACACCGGGCGATGGCGGCGCCGCCTCGCGATCCGGGGAAAAACCCTAGGGGGGTCCTCCCCGGCGACCGCATCTT
CGCCTCGCTGGCCCCCTACATCACCTTCGCCGACCACCTCCGCCTCCGCATCGTCTGCCGCGCGTGGCGCTTCTTCTCCC
GCCGCCTCGGCCGCCGCCCGCCGCCCTTCCCGTGGCTCATGCTCCCGGAGCCGGCCTCCGCCTCGCAGTCCGCGCCCGCG
CCCGCGCCGGCCAACGTGCGCCGCCAGTTCTACGACATCCCCGGGGGGCGGCCCTACGCGTACGATGTCCCGGGGGAGGG
CTACCACCGCTGCGTCGCGTCCTCCGCCTGCGGGTGGCTCGTCTTCGTCTCCGTGGACGCGCCGCGCCGCCTCGTCCTCG
CGAACCCCGTCGCCGGCGCGCGGCTGGTCCTGTCGTGGCCGTTCAAGGAGAAGAACGCCGAAGGGCGATTCCACGCCGCG
CTGACGTCATCGCCGGCTGACCGCCGGGCGTGCTTCCTCGTCCTCGCCACGGACAGGCTCGTCGCCTACTGCCGCCCCGG
CCAGCAGGACCAGGGGTGGCTCACCCTGCGCGCCCCGGGGTTCCGCTACGACCCGGCCGCCAGCGACATGGTCACCGTCG
GCGCCATGGTGTACCTGGTCGACGGCAGGAGG------------------------------------------------
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>chr1B_1675
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-------------------------CAGGAGGAAGGTCTGGCGCGCGGACCTCGCGGACCCGGAGCCCAAGGTGGAGTGC
CGGAACACGGCGTGCCAGCTCCCGTTCGGCGAGAGCAGCATGCGCCACTACCTCGTGGAGTCGCTCCGGCACGTCCACCT
CGTGCTCGCGGACGAGCACAACGCGCGCGTCGCGCTCTTCAGGTTGGACTGGGACAAGAAGATGTGGATGCAGGACCGGG
TGCGCGGGGACCGTGTCCTGCTTTTGGGCCGCGGGTGCTCGGCCTCTGTGCCGGCGGCGTCGGGCCGGCCGCCTGGCATG
CTGCTATTCGCGCACCAGCCGTCGTTGAGTCTCGTTGACGTGGGCGGTTGTGGCGCTGGGCTCGCGTGGTTCTGGGCGGA
ATCGTGGGTGGATGACGGCTCGGATGATATGCTGGTGCTGAAGAAGAAGATGCACCACCGGCAAGGCGAGTTCACCGCTG
GTGACTCGTTCTGGTTCTTCCCGGCCATCGATCCGGATGAAAGGGCTATGGTTGCATCGCAGGCCTAGCTAGTTGGAACA
TGAAATTCGTGCTTCTGGTAGGCTGGTTTGAACCTCAATTACTGGACTAAGAGAT---AGTGTAGAACCATGGGTTCTGT
GAAAGCTGCATCTTATTTCTGTTGTTTTTGTCTGAAGATAGCAATAGTCCT-AAAGTTGCAAATATCTGAAAGCCCTGGT
TCTGCATCCTGTTCCTATATGATTCAAACGAGTTGTGATGCAACCAGCAATACATGAACGTAAGCTATCATTTATCGAGA
AGTGTTGATTGCGCCATACCGGGGTGCGATGCGTGGCCATATACACGAAACGGTGATTTTTTT---CATAATTCATTTTC
AGCTTTTCAGAATCCTAGCTAAGGGACCCTTTGATTCATAATATATCATTGGAATTTTGGAGGATTATGTTTCT------
-------------------------------------------------------TAGGAAGTTTTCATTTGTAGCTTGC
TTGGAGTGGAGAATTGTAAACCATAGACAGTTTTTT------TGTGTGTGTTTTTGCGGGTCAAACCATAGACAGTTTTC
TTATAATCCACTTTACTTGCAATTTTAAAGGAAAAAAATTCCATTAAGCCCAA-ATCACGAAAAACTTCACAATGGATTT
TTTTT---------------------------------------------------------------------------
------------------------TCATATTTCCTAGTCCTATCATTTTAAGAACCAAAGAGGTGCACTTACAATGTAAT
AACATCTGATCCTTAGTTTGAGGGAGTCTTTCCTGTTTTGATTGGAATTGGCTT--TGCTCTCATTTCCGAAACACCTAA
ATCCCCTATTTATATCATTGCAGAAGAATGATAGGCCATATCCATTCACTGTTAT-TTTACTATAATTGCCATAATGGTA
TTTAAATTGATGGAATTTTAGAATCATTGGTACATAAAATTATCTAAATAATCATGTGATATTTCTGCCTAAATACTCCC
TACAATTATTTAAATTGATGCACTTTTAAATCTGCTGGGATGTTTGAAGTAGAGTGATTCCCCCTGATGGAGTGCATC
>SNPs
-------S--------------------------------------------S-------S-------------------
S-------------S--------SS-------------------------------------------------------
------------------S-------------------------S-----S----------------------S------
----------------------------------------S---------S--------------S--------------
------------SS-----------------S--------------S---S-----------------------------
-------------------------------------------------S-----SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------S---------------
-------S-------S-----------------------------------------SS---------------------
-------------SS---S--S----------S------S----------S----------------S------------
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S------S-S----------------------------------------------------------------------
-----------------------------------------------------SSS--------S---------------
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----------------SSSS------------------------------------------------------------
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-------S-----------------------------------------S------------------------------
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------S---------------------------------------------S---------------------------
-S-----S--------------------------S---------------------------------------------
--S-----S------------------------------S---------------------------------S------
-----------------------------S--------------------------------------------------
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-------------------------------------------------------------S------S-----------
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-------------------------------------------------------S------------------------
---------------S-------------S--------------------------------------------------
--------------------------------------------------S-----------------------------
----S---------S------------------S---------------------SSS----------------------
-----------------------------------------S--------------------------------------
------------------------------S----------------------------------S--------------
------------S-------------------------------------------S-----------------------
--------------------------------------------------SS------S---------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
-----------------------------------------------S--------------------------------
-----S-------------------------------------------------------------------SSSSSSS
SS-SSS--------------------------------------------------------------------------
-------------S------------S-----------------------------------------------------
-----SS-----------------------------------------S-------------------------------
------------------------------S---------------S--------S------------------------
----------S---------------------S-S------------------------S--------------------
--------------------------------S---------------------------------------------
>forward_61
-----------------------------------------CAAGAGGTTCCTTGTGTGCG-------------------
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>reverse_1555
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----------------------------------CTGGCCGTTCAAGGAGAAGA--------------------------
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>forward_1060
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CCGGAGACCAATCGATCGAT------------------------------------------------------------
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>reverse_2176
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---------------AGGCTCGGATGATAAGCTGG---------------------------------------------
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>forward_1982
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------------------------------------------GCTGGACTGGGACAAGAAGG------------------
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>reverse_3169
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------------------------------------------------CGGCTTTGTTCTCATTTCCGA-----------
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