>input_sequence_57772
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CTATAAATA
GCCATACACCGTGAAGACCCCCTTCCATGATCCATCTTTCACACATTTAGAGCACAAACATTCAAACTAAACAATACAGA
GTAACCACAAATCCATCATGAAGATCCTCTTGGTCTTTGCCCTCCTCGTTGTATCAACGACCATCACCACCGCGATCGTG
CAGCTCGACCCTAGTGTCCATGTCCAAGAAAGGCCACAACAATCATTTCTGCAGCAGCAACCACTTACCCAGCAACAACC
ATTGCCGCTGCAAGAACCACAACAACCACTATTCCCGCAAAAAGAGCCACAACAACCATTTTCGCTGCAGCAACCACAAC
CCCAGGAACAACAACCATATCCACAACAGCCACTTCTCCAACAACAACTTCCCCAGCAACATCTATTCCCGCAGCAGCCA
CCACAACAACAATTTC------------------CGCAGCAGATGCCACTTCCATATGAACAACAAACATTCCCGCAACA
ACAGCAACAG---------------------CAACCACAATTCCCGCAACAACAACCATTTCCCCAATATCAACAACCAT
TAACACAACAACCATACCCGCAAGAGCAACCATTGCCACAACAACAACCTTCTGTGGAGGAAAAACAACAATTGAACTTG
TGCAAGGAGTTCCTCCTGCAACAGTGCAACCCGGAGGAGAAACTGTCATTAATCCAGTCAGTGATCCCGTTCCTCCGACC
AAAGACCTCGCAACAGAATAGCTGCCAGTTGAAGCGTCTACAATGTTGTCGACAACTTGCACGTATCAATGAACCGTCCC
GATGCCCGGCCATCCACAACATTGTGCATGCCATCGTCATGCAACAACAACA------------------TGTGGATAGA
GGTTTCGGCCAGCCTCAA-CCACAACAGTTGGGCCAGGGAATGCCCATGCAGCCTCAATATCAATTGGGCCAGGGCTTTA
TCCTACCTCAACAACTAGCCCAGTTCAAGTTGGTTAGGTTACTTGTGATTCAGACCCTGCCTATGTTATGCAACGTGCAT
GTCCCATCTGACTGCTACACCACTAGTGCACCATTTGGTAGCATGACTGCCATGAACGGTGGACAGTGAAATGAAAACAG
TTGTACTACTAGATAGATGGACCTTCATTGTTTACTCGATTGGACGATCGATGTAGCAATGAAAAAAATATAAAATGTCA
TGCACCATCATATGTGTGACTCCAACCAATACAAGTTCAAACTTGGGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr1B_1_TraesCS1B01G010600
AGCGAGCAGGCGACGACAGCCTGGTGCTGCTACGGGTCACAGGAGGAGCCAAGGCGGCGGTGCCGGGTGGCTCGAGCTAT
TATGCGGGCACACGGAGGTGTCCGTAGAACTGGAGGTCATTGGCCGGCGCGGTGGCGTTGATCCTCTCGACGAGTGACAC
CGAGCCTTCAACAACGGTGTCCATTTCAGTTGGGTC-----TGTTGTGTACATCGGTGGTGTCCGGCTTTTCGTCTGCGT
CCGTTGTCCATTTTGGCAACCCAAATGGAAAAATGCAGAT--AAAATCCGCGTCTGCTTGGGTCACTACATTGGAGTTGG
CCGTATGCTATTCCATAGTATACTCAACGCACTCTATAATTCACATAGCATGCTATTGTAGGTGTCGTTGTATTTGATAC
ACCGTGTGCAATATGTTTTTTTCTGGTGACTATATATGTACTATCGAACCAAGTATAAAGTTTCTTCAAAGGGTTTAATA
TCATGTGCATGGTGGTCCTGCATAAATGCGTGAGAATCACC-TAGTGTGTATTAACAACTCATATGACATTAATAACATT
GACAT-AAAG-AAAGAATTGATGAGTCATGTATGCTTGTTCATCTTACCATCATATTACACAAAACTACGAAGTTAGTTT
AGGAAGAAGGAGTCCAGAACAATCTTCACATTACTAGTATGATCTATCTTAACAACG-CAAGCAAGACTACAAACTTAGT
TCCCCACAAGTTATGCCAACCTGGATGTGCCTAACAATGTGTAGAAAATTACAAACTTAGTTTTTGAAAGGGG-TGTAAT
CTAGATAAGTGTTTCCGATGTAAAATGAATATGATGAGTCATTACGATTATCAAGCTTTCCTGACACTCCATGGATGTGT
GCTACAAGAAAGCAACTTTGGCGATTAATCCAAA--TTACACTTGCAAGTAGCCCTGCGAAGAT----------------
-AGTTTGATAAGAGTATCAGAACTTTACAAGAAAGAAAATATGAAGACGAAAAGAAATCATTTCATGGCATCTATAAATA
GCCATACACCGTGAAGACCCCCTTCCATGATCCATCTTTCACACATTTAGAGCACAAACATTCAAACTAAACAATACAGA
GTAACCACAAATCCATCATGAAGATCCTCTTGGTCTTTGCCCTCCTCGTTGTATCAACGACCATCACCACCGCGATCGTG
CAGCTCGACCCTAGTGTCCATGTCCAAGAAAGGCCACAACAATCATTTCTGCAGCAGCAACCACTTACCCAGCAACAACC
ATTGCCGCTGCAAGAACCACAACAACCACTATTCCCGCAAAAAGAGCCACAACAACCATTTTCGCTGCAGCAACCACAAC
CCCAGGAACAACAACCATATCCACAACAGCCACTTCTCCAACAACAACTTCCCCAGCAACATCTATTCCCGCAGCAGCCA
CCACAACAACAATTTC------------------CGCAGCAGATGCCACTTCCATATGAACAACAAACATTCCCGCAACA
ACAGCAACAG---------------------CAACCACAATTCCCGCAACAACAACCATTTCCCCAATATCAACAACCAT
TAACACAACAACCATACCCGCAAGAGCAACCATTGCCACAACAACAACCTTCTGTGGAGGAAAAACAACAATTGAACTTG
TGCAAGGAGTTCCTCCTGCAACAGTGCAACCCGGAGGAGAAACTGTCATTAATCCAGTCAGTGATCCCGTTCCTCCGACC
AAAGACCTCGCAACAGAATAGCTGCCAGTTGAAGCGTCTACAATGTTGTCGACAACTTGCACGTATCAATGAACCGTCCC
GATGCCCGGCCATCCACAACATTGTGCATGCCATCGTCATGCAACAACAACA------------------TGTGGATAGA
GGTTTCGGCCAGCCTCAA-CCACAACAGTTGGGCCAGGGAATGCCCATGCAGCCTCAATATCAATTGGGCCAGGGCTTTA
TCCTACCTCAACAACTAGCCCAGTTCAAGTTGGTTAGGTTACTTGTGATTCAGACCCTGCCTATGTTATGCAACGTGCAT
GTCCCATCTGACTGCTACACCACTAGTGCACCATTTGGTAGCATGACTGCCATGAACGGTGGACAGTGAAATGAAAACAG
TTGTACTACTAGATAGATGGACCTTCATTGTTTACTCGATTGGACGATCGATGTAGCAATGAAAAAAATATAAAATGTCA
TGCACCATCATATGTGTGACTCCAACCAATACAAGTTCAAACTTGGGAATAAAGGCAAATAAAATGTTGCACGTCATGCC
CATCTAATTCGATAGGAA------TCCATCGATTCTATATCAATTTTTCACAA-GTATATCA--------------TGCA
ATGTGAAAAAAGGAACCTCCTAGTCCGGAAAATTTAGTTCGGAGATCTCGTGCCCATAATCGCCCCTAGCCATTGAAAAA
AAA-----------------------------------------------------------------------------
---------------TGTCCGTGTGTGGATTCAGTGCATAGGAATGGGGCCCAGAGGGCAGTGCGTGCGCAAACGGCTTT
AAAGTCCAGGACCATGTGCTTCTTCAGA------------------TTTTGAATCCCATGTCGTGTTCTTCTGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTGATTCCTCACCCCAAATGTCCCAAAATATCCCAAATCTATCCCA
ATACTGAGCTCATTTGTGCGACCTCGATCCATCCAATTACCGGGTCGATCGTGACACTCAGCGATGGAGCGGAGGGAGAC
GTCTAGG------------------------------GGCTCACAATGGCTCAATCGCGGATTTGTGGTGGAGAGCGTGG
TCATGGCTACGGCGTCATCGTGTGCGTCCATAACCCATCCTCGTGTGCGTCATCGTGTACGTCTAGTACTGAGCCGTCCC
TCGTCAGTACTGGCTGCTACGCTAGCCTAGGCACCTCCTCCTCCCCAACCCATCCTCACCCATGCAGCCATTGGCATGGC
CGCCCGTAACTGCTGTG---------GCCGGGAGTGGGGGTCATGTCGTAGGGCGTCTCCTGATTGAACCACCGTGCTGG
CCGCCTCCAATACATTGC
>chr1D_151
CGAGC---------------------------------------------------------------------------
---------------------------------------------------------------------------GACAC
CAAGCCCTCAACAACCGTGTCCGTTTCAGTTGGGTCTTCCATGTTGGGTACACTGGTGGTGTCCGGCTCTCCGTCTGCGT
CCATTGTCCGTTTTGGCGACCCAAACGGACAAAAAGCGGACAAAAATTCGTGTCCGTTTGAGTCATTGCGTTGAAGTTGG
CCTTATGCTATTCCACAGTATACTCAACGCACTCTA--ATTCACATTGCATGCTATTACATGCGTCATTGTATTTGATAC
ACCGTGTGCAATATTTTTTTT-CTGGTGACAATATATCTACTATCGAACCAAGTATAAAGTTCC-TCAAAGGGTTTAATA
TCATGTTCATGGTGTTCCCGCGGAAATGCATGGGAATCATC-TAGTGTCTATTAACAACTCATACGACATTACTAACATT
GGCAT-AAAAAAAAGAATTGATGAGTCATGTATGCTTGTTCATCTTACCATCATATTACACAAAACTACGAAGTTAGTTC
AGAAAGAAATAGTCTAGAACAATCTTCATATTAATAGTATGATCTATCTTAACAACGCCAAGCAAGACTATAAACTTAGT
TCCCGACAAGCTATGCCAACCTAGATGTGCCTAACAACTTGCAGAACATTACAAACTTAGTTTTAGAAAGGGG-TGTAAT
ATAGATAAGTGTTTCGCATGTAAAATGAATATGATGAGTCATTACGATTATCAAGCTTTCCTGGCACTCCATGGATGTGT
GCTGCAAGAAAGCAACTTTGGCGATCAATCTGAAAATTACACTTGTAAGTAGCGCCACCGAACAAAACATACCAAAGGAT
CAGTTTGATAAGAGTAGAGGAACTTTACAAGAAAGCAAATGTGAAGACGAAAAGAAATCATTTCATGGCAGCTATAAATA
GCCATACGCCATGAAGACCCCCTTCCATCATCCATCCTTCAGAAATTTGGAGCACAAGCATCCATAATAAACAATCAAGA
GTAACCACAAATTCACCATGAAGATCTTCATGGTCTTTGCCCTCCTCGTTGCATCAACGACCATCACCACCGCGACCGCA
CAGCTCGACCCTCGCATCCATGACCAAGAAAGGCCACAACAATCGTTTCTGCAACAGCAACCACTTATCCAGCAACAACC
ATACCCGCCTCAAGAGCCACAACAACCACTATTCCCGCAAAAAGAGCCACAACAACCATTTCCGCTGCAGCAGCCACAAT
ACCAGCAACAACAACCGTATCCACAACAACCACTTCCCCAAGAACAACTTCCCCAGCAACATTTATTTCCGCAGCAGCCG
CCACAACAACAATTTC------------------CACAACAGATGCCACTTCCGCATCAACAACAAACATTCCCGCAACA
ACAACAACAACAAGAACAACTCCCACAACAACAACCACAATTCCCGCAACAACAACCATTTTCCCAATATCAACAACCAT
TAACACAACAACCATACTCGCAAGAGCAACCATTGCCACAACAACAACCTTCTGTAGAGGAAAAACAACAATTGAACTTG
TGCAAGGAGTTCCTCCTGCAGCAGTGTAACCCAGAGGAGAAACTGTCGTTACTCCAGTCAGTGATCCCGTTCCTCCGACC
AAAGACCTCGCAACAGAACAGCTGCCAGTTGAAGCGACTACAATGTTGTCGACAACTTGCACATATCAGTGAACCGTCCC
GATGCCCGGCCATCCACAACATTGTGCATGCCATCGTCATGCAACAACAACA------------------TGTGGATAGA
GGTTTCGGCCAGCCTCAA-CCACAACAGTTGGGCCAGGAAATGCCCATGCAGCCTCAACATCAATTGGGCCAGCACTCTA
TCCTACCTCAACAACTAGCCCAGTACCAGTTGGTTAGGTTACTTGTGATTCAGACCCTTCCTATGTTATGCAACGTGCAT
GTCCCGTCTGATTGCTACACCATTACTGCACCATTTGGTAGCATGACTGCCTACAATGGTGGACAATGAAATCACAATAG
TTGTACTACTAGATAGATGGACCTTCATTGTTTACTCGATTGGACGATCGATGTAGCAATGAAAT-AAAATAAAATGCCG
TGCACCATCATATGCGTGACTCCAACCAGTACAAGTTCAAACTTGGGAATAAAGGCAAACAAAATATTCCACGTCATGCA
CATCTACTTTGATAGGAACTGCAATCCATCGATTATGTATCATTTTTTTCATAGGTATATCAACCCAGTCCCACCATGTG
ATGTCAAAAAAGGAACCTCCTTATCCGGAAAATTTAGTTCAGGGATCTCATGCCTCTAATCCCCCCAGCCA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr1A_276
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AAAATCCGTGTTTGTTTGGGTCGCTGCATTGAAGTTGG
CCTTGTGCTATTCGACAATATGCTCAGCGCACTCTATAACTCACATAGCATGCTATTACATGTGTCATTGTATTTGGTAC
ACCGTGTGCAATATGTTTTTT-CTGGTGACTATATATCTACTATCTAACCAAGTATAAAGCTTCTTCAAAAGGTTTAA--
TCATGTGCATGGTGTTCCCGTGGAAATGGATGGGAATCATCTTAGTGTCTATTAACAACTCATACGATATTACTAACATT
TACAAGAAAAAACATAATTGATGAGTCATGTATGCTTGTTCATCTTACCATCATATTACACAAAACTACGAAGTTAGTTT
AGAAAGAAGCAGTCTAGAACAATCTTCACATTAATAGCATGATCTGTCTTAACAACGCCAAGCAAGACTACAAACTTAGT
TCCCCACAAGCTATGCCAACCTGGATGTGCCTAACAACTTGTAGAACATTATGAACTTAGTTTTAGAAAGGGGATGTAAT
CTAGATAAGTGTTTTGCATGTAAAATGAATATGATGAGTCATTTGGATTATCAAGCTTTCCTGACACTCCATGGATGTGT
GCTACCAGAAAGCAACTTTGGCGATCAATCCAAAAATTACACTTGTAAGTAGCGCCACCGAACAAAACATACCAAAGAAT
CAGTTTGATACGAGTAGAGGAACTTTACAAGAAAGCAAATGTGAAGACGAAGAGAAATCATTTCATGGCCGCTATAAATA
GCCATACACCATGAAGACCCCCTCCCATCCTCCATCCTTCACACATTTGGAGCACAAACATTCACACTAAACAATCAAGA
GTAACCAAAAATCCACCATGAAGATCTTCTTGGTCTTTGCCCTCCTCGTTGTATCAACGATCATCACCACCGCGACCGCG
CAGCTCGACCCTAGCATCCATGTACAAGAAAGGCCACAACAATCGTTTCCGCAGCAGCAACCACTTACCCAACAACAACC
ATTCCCGCTGCAAGAGCCACAACAACCACTATTCC---------------------------------------------
---AGCAACAACAACCGTATCCACAACAGTCACTTCGCCAACAACAACTTCCCCAGCAACATTTATTTCCGCAGCAACCG
CCGCAACAACAATTTC------------------CATAGTAGATGCCACTTCCGCATCAACAACAAATATTCCCGCAACA
ACAACAACC---------------------------------CCCACAACAACAACCATTTTACCAATATCAACAACCAT
TAACACAACAACCATACACGCGAGAGCAACCATTGCCACAACAACAACCTTCTGTGGAGGAAAACCAACAATTGAACTTG
TGCAAGGAGTTCCTGCTGCAGCAGTGCAACCCGGAGGAGAAAGTGTCATTACTGCAGTCAATGATCCCGTTCCTCCGACC
AAAGACCTCGCAACAGAACAACTGCCAGTTGAAGCGGCAACAATGTTGTCGACAACTTGCACATATCAGCGAGCCGTCCC
GATGTCCGGCCATCCACAACATTGTGCACGCCATCATCATGCAACAACAACAAC------------AACATGTGGATAGA
GGTTTCGTCCAGCCTCAA-CCACAACAGTTGGGCCAGGGAATGCCCATGCAGCCTCAACATCAATTGGGCCAGGGCTTAA
GCCTACCTCAACAACTAGCCCAGTTCAAGTTGGTTAGGTTACTTGTGATTCAGACCTTGCCTATGTTATGCAATGTGCAT
GTCCCATCTGATTGCTACACCATTAGTGCACCATTTGGTGGCATCACTGCCTACAACGGTGGACAATGAAATCACAAGAG
TTGTACTACTATATAGATGGAACTTCATTGTTTACTCGATTGGACGATCGATGTAGCAATGG---AAAAATAAAATGTCA
TGCACCATCATATGCGTGACTGACACCAATACAAGTTCAAATTTGGGAATAAAGGCAAACAAAATATTGCACGTCATGCC
CATCTAATTCAATAGGAACTGCAATCCATCAATTCCATATCAATATTTCACAA-GTATATCAACTCAGGCTCAGCGTGCA
ATGTGAAAAAAGGAGCCTCTTGATCCGGAAAATTTAGTTCAGGGATCTCGCGCCCCTAATCACCCCCAGCCACCAAAGTC
CATCGACGGCTGCCAGGAGGTATGATCTCAGGGTCATGTCCTGGGTCGATGAGTTGTACCAGCATGTGTCGCCGTGTGAC
CTTTTCCAAAAAATGTGTCCGTGTGTGGGTTCATTGTATAGGAATGGGTCCCAGAGGGCGGTGTGTGTGCGAATGGCTTT
AAAGGCCAGGACCATCTGCTTCGAGAGGCATGTCAATGAATGAATGTTCTGAATCCCATCTGTGTTCTTTTGGTCCTCAC
CTCCTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CTCTGATTCCTCACTCCAATTCTCTCAAAATATCCCAAATCTATCCAA
ATACCGAGCTCATTTGTGCGATCTCGATCAACGACCGGG---------TCGTGACACTCAGCGATGGAGCGGAGGGACAC
GTCCGAGGGAGGAGGCGTTGCTCATAGGGTGGCATGAGGCTCACACTGGCTCGATCGCGGATTTGTGGTGGAGGGCGTGG
TCATGGCCACGGCGTCATCATGTGCGTCCATGTATGGGCACGAGG-----------------------CTGAGCCGTTCC
TCCTCAGTACTGGCTGTTGCGCTAGCCTGGGCACCTCCTCGTTCCCAACCCATCCTCACCCATGCAGCCATCGGCATGGC
CGCCCGTAATTGCAGTGGTGAGCGGCGCCGGGAGTAGGGGTCATGTCGTAGGGCGTCT----------------------
------------------
>chr1A_1368
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CAACAACCACTTCCCCAACAACATCTATTTCCGCAGCAACCG
CCACAACAACAATTTC------------------CACAG------------------CAACAACAAACATTCCCGCAACC
T------------------------CATCAACAACCACAATTCCCGAAACAACAACCATTTTACCAATATCAACAACCAT
TTACACAACAACCATAACCGAAAGAGCAACCATTGGCACAACAACAACCTTGTGTAGAGGAAAGACAACGACTGAACTTG
TGCAAGGAATTCCTCTTGCAGCAGTGCAACCCGGAGGAGAAGGTGTCGTCACTCCATTCGATGATCCCGTTCCTCTGACC
AAAGACCTCGCAACAGAATAGCTGCCAGTTGAAGCGACAAGAATGCTGTCGCCAACTTGCACATATCCATGAGCAGTCTT
GATGCCTGGCCATCCAAAGCCCTGTGCATGCCATCATCGTGCAACAACAACAACGACGACAACAACAACAGGTTGATAGA
GGTTTTGGCCAGCCTCAACCCACCACAATTGGGCCAGGGAATGCCCATGCAACCTCAATAGCCACTGGGCCAGGGCTTTA
TCCTACCTCAGCAACTAGCCCAGTTTAAGTTGGTTAGGTCACTTGCGATTCAGATCCTGCCTATGTTATGCAACGTGCAT
GTCCCGTCTGATTGCTACACCATTACTGCATATTTTGGTAGCATGACTGCCTGCAGCTGTGGACAATGAAATGACAAGAG
TTGTACTACCACACAGGTGGACCTTCATTGTTTACTCGATTGGACAATCGGTGTAGCAATG-----AAAAAAAAATGTTG
TGCACCATCATATGTGCGACTCCAACCAGTACAAGTTCAAACTTTGGAATAAAGGCAAACAAAAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr1D_1386
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CAACATCTATTTCCGCAGCAACCG
CCACAATAACAATTTCCACGACAGATGCAAGTTCCACAG------------------CAACAACAAACATTCCCGCAACC
T------------------------CAACAACAACCAC-ATTCCTGCAACAACAACCATTTTACCAATATCAACAACCAT
TAACACAACAACCATACCCGCAAGAGCAACCATTGGCTCAGAAACAACCTTTTGTAGAGGAAAAACAACAATGGAACTTG
TGCAAGGAGTTCCTCTTGAGGCAGTGCAACCCGGAGGAGAAGGCGTCGTTACTCTATTCGGTGACCCCGTTCCTCCGACC
AAAGACCTCGCAACAGAATAGCTGCCAGTTGAAGCGACAAGAATGTTGTCGCCAACTTGCACATGTCAGTGAGCAGTCCC
GATGCCCGGCCATCCAAAGCATTGTGCATGCCATCGTCGTGCAAC-----------------------------------
--------------------CACAACAGTTGGGCCTGGGAATGCCCATGCAACCTCAACAGCAATTGGGCCAGGGCTTTA
TCCTACCTCAGCAACTAGCCCAGTTTAAGTTCGTTAGGTCACTTGTGATTCAGACTCTGCCTATGTTATGCAACGTGTAT
GTGCTGTCTGGTTGCTACACCATT-----------TGGTAGCATGACCGCTTGCATGGGTGGACAATGAAATGACAAGAG
TTGTACTACTAGATCGGTGGACCTTGATTGTTTACACAATTGGACGATCAATGTAGAAATG------AAAAAAAAAATTG
TGCACCATCATATGTGCGACTCCAATCAGTACAAGTTCAAACTTGGTAAGAACGGCAA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>SNPs
S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
-S----S--------S------S-----------------------S-----SS--------------S-S---------
--S------S-------S-------S---S---SSSS-SS----------S-----S----------S-----S------
--S------------S-----------------------------------------SS-S-----S-------------
---------------------S---------------S------------------------------------------
--------------S---S--SS------S--S------S--------S---------------S-------S-------
---------S----------------------------------------------------------------------
--S------S----S------------------S----------------------------------------------
----------S--------------------------SS-------S-----------------S---------------
---------------SS---------------------------------------------------------------
-------------------------S-------------------S-------S-SS-SS-SSS----------------
----------------SSS----------------S----S-----------------------------S---------
----------S-----------------S-------S-----------S---------------S----------SS---
---------------S----------S------------------------------------------------S--S-
--------------SS----------------------------S-----------------------------------
---S-----------S---------------------------------------------S----------S------S
S----S----------S-------------------S------------------------------S-----------S
-----------------------------------S-----------------SS--S----------------------
---S-----S---------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------S------------------------------S----------------------------
------------------------------------S-------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S----------S----------------------------SSS-----------S--------S--S--
----------------------------------------------------------------S---S-----------
-----------------------------------------------------------S-----S--------------
--------------------------------------------------------------------------------
---------------------SS-----------------S-S------------S-----S----S-----SSS--SSS
S-S-----------------------------------------------------------------------------
----------------------------S----S--S-----------S----------S---S---S--S--S------
----S----------S------SSS--S--------------------S----------S-SSSS-SS--SS-SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S----S-S--S---------------------S-
----S----------------S-------S-SSSSSSSSSSSSSSSSS-----------------------------S--
---SSS---------------------------------------S------S--------------------S------
-------S-----------S-----------SSSSSSS-SSSSS-SSSSSSSSSSSSSSSSSSSSSSS---------S--
--S-------------S-S---------S-----------S-S----------------------------S--------
---------S---S---------------------S----------------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_87
-------------------------------------------------------------------TGGCTCGAGCTAT
TATGCGG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_1353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ACCACAAC
CCCAGGAACAAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_90
----------------------------------------------------------------------CTCGAGCTAT
TATGCGGGCA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_1530
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GCAACCACAATTCCCGCAAC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_96
----------------------------------------------------------------------------CTAT
TATGCGGGCACACGGA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_1732
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ATCCAGTCAGTGATCCCGTTC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_125
--------------------------------------------------------------------------------
-------------------------AGAACTGGAGGTCATTGGCC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2092
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CTGCTACACCACTAGTGCAC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_1797
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATAGCTGCCAGTTGAAGCGT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_3045
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TGAGCTCATTTGTGCGACCT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
