>input_sequence_57717
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-------------------------------------------------C---------TATATATTCAACCCTGACCAC
GACCGACGTACCTAAACAGCCCGGATCGATATGGCA------GCCGTCCCCTCTGTTGCCGACGGCCGCAATGTCACGGC
GGTGACGGGGGCGGTGAGCGAGGTGCCGATGGTGACGGGCACGCATGAGTTCACGATTCGCGAGTACAGCCGTACCAAGG
GCATGGGCGTCGGCAAGTCGATCCTGTCGCAGCACTTCTCCGTCGATGGCCGCCGGTGGCACATCCGCTTCTACCCGGAC
GGCTACAGCACGGCGGATGGCGGGTGGATCGCCTTGTACGCGCAGACGCTCCACAAGCCGCAGTTCCGGCCCGTGAGCGC
CGAGTTCACCTTCCAGCTCCTCGGCCCCGACGGCGACGTCCGCCACACGCGGCGGTCCGACCGGGCCTGCAAGTACGACA
CCTTGTGCAGCAGCTGGGGCATCCGGCGCTACATCACCCGGGCGCACCTCGAGAGCGCGGCGCTGGGCGCCATCCACGCC
GACTCCATCACCGTGCGCTGCACCGTGACGATCCACAAGGCGCGGAGGAGGAGCCTCGCCGTCAACCGCCCGGGCCTCGT
CAAGATGCCACCGCCGCCGCCGTCGAACCACGGGGAGAACGCCATCCGGTTCCTCGCCGGCAGGAAGGCCCCCTTCGACG
TGCGGTTCGAGGTGGACGGCGAGGTGTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGTCGTCGTGGTTGGAGGGCCTC
CTCTACGGCCACGGCCGCGAGGCGG------GGAAAGATCTACTGCTCGAAGTAGGCGGCGGCATTGTCACCGCGGAGGC
GTTCAGGGGCGTGCTCCACTTCATCTACACCGACGAGCTCCCCGGCGATGCGACC------------AAGGGGCGGGGGT
CGTACGATGTGACGCTGCGGCTGTTCGAGGCCGCCGACTACTACCTGATCGACAGGCTGAAGCTGATGTGCGCGTGCAGG
CTGGGCGACTTCATCAAGGACTCCACCGTGGATACGCTCATGGAGATCGCGGAGGCCTACTCGTGCAAGGACCTCCAGGA
GGCGTGCCGGAACTTCGCGGCGTGCAGGGGGTTGAGATTGCTGCCTAACCTAGGAAACATACAGAGCGCGATAAGGAAGA
GGTTAACGTCCAGCGGCGCCGCTGCTCCGGCGACGAGGAGGATCATGGACATGGCGTCCACGAGTGGCGCTGACACTGAG
TGA-----------------------------------------------------------------------------
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----------------------------------------------------------------
>chr2D_1_TraesCS2D01G486500
ACTATACCAGAATTGCTACTTTACTGTTGATTGCAAACACGCTAAATCATGGTCCGCTAAACCCGGAACAGGCACCGCTA
TCGATTTTTTTAGCTAAAAAGACCGCCATGCAATTGGACCAGAAAAAACCGAGTGAACCGGTCGGTTTTCGCATGAACCA
GAGGTATAAAACCGGCAGTTGAACCAGTGGCATGCACAAATATAGAAAAGTAACCTGTGTCAAAGTGGATTTGAATCCAA
GATGCTAGATATATGTGTGTAAGTTGTAGCTTTGGCACTATAACCATATTGGCTATCCAACTTTCGTATCAAATTTAAGT
AAATGATTGTATTTTACATCTATTTAGTACGACACTAGTACACGGAAAAAATATGATATAAGAAAACAGAAATGTAACCG
GCGAAACCGGCAATCCGACTGGTAAAAACCTGTACCGGCGGCCTTGCCGGTTCTATCACAGGTTCGGTTTTTTAAGCTAT
GGTCCTAGTATCTTGCTGCCGCAGTTGTTGCACTCGGCTGGGGTCGTGCTCGCCATCTTGCTGGTTGCAGCACCGCCTTT
GCCGGTACAGCTAGGCGTCGGCGGTTCGCAGCTGTGGCCAAGTGAACAGAGGGATCTATCAGTTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTGGGCAATTAGTAGAGGAAATTAAGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CTTTGCTGTCTACGTTCCAAGATGCTAGAGTTTCCTGGGTGCGTCGATT---------TAAGAACAAA
GTCGCGCATATCCTAGCTAGAAAGGGTTGCTGTAAGTCATTATGTAAAACTTGGTTTCATGTGGCTCTAGAGTGTATTAG
CTCGGAGATTACCGCAGAGGAGGCTATGAACTTTGAATAAAATGGCAACGTTTCCCTCAAAGGAAAAAGAGATAGGATTA
GATCAATTTGAAACGCGTTTTTTTTATGACATGGAGTTTGAAACACTGAATCAACGGAGACCGACGGCCGGACGACGATT
GCTGGGATTAGAGTTTGATCAACGTGCGATCGTGACGTTCGCGGGTATAC---------TATATATTCAACCCTGACCAC
GACCGACGTACCTAAACAGCCCGGATCGATATGGCA------GCCGTCCCCTCTGTTGCCGACGGCCGCAATGTCACGGC
GGTGACGGGGGCGGTGAGCGAGGTGCCGATGGTGACGGGCACGCATGAGTTCACGATTCGCGAGTACAGCCGTACCAAGG
GCATGGGCGTCGGCAAGTCGATCCTGTCGCAGCACTTCTCCGTCGATGGCCGCCGGTGGCACATCCGCTTCTACCCGGAC
GGCTACAGCACGGCGGATGGCGGGTGGATCGCCTTGTACGCGCAGACGCTCCACAAGCCGCAGTTCCGGCCCGTGAGCGC
CGAGTTCACCTTCCAGCTCCTCGGCCCCGACGGCGACGTCCGCCACACGCGGCGGTCCGACCGGGCCTGCAAGTACGACA
CCTTGTGCAGCAGCTGGGGCATCCGGCGCTACATCACCCGGGCGCACCTCGAGAGCGCGGCGCTGGGCGCCATCCACGCC
GACTCCATCACCGTGCGCTGCACCGTGACGATCCACAAGGCGCGGAGGAGGAGCCTCGCCGTCAACCGCCCGGGCCTCGT
CAAGATGCCACCGCCGCCGCCGTCGAACCACGGGGAGAACGCCATCCGGTTCCTCGCCGGCAGGAAGGCCCCCTTCGACG
TGCGGTTCGAGGTGGACGGCGAGGTGTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGTCGTCGTGGTTGGAGGGCCTC
CTCTACGGCCACGGCCGCGAGGCGG------GGAAAGATCTACTGCTCGAAGTAGGCGGCGGCATTGTCACCGCGGAGGC
GTTCAGGGGCGTGCTCCACTTCATCTACACCGACGAGCTCCCCGGCGATGCGACC------------AAGGGGCGGGGGT
CGTACGATGTGACGCTGCGGCTGTTCGAGGCCGCCGACTACTACCTGATCGACAGGCTGAAGCTGATGTGCGCGTGCAGG
CTGGGCGACTTCATCAAGGACTCCACCGTGGATACGCTCATGGAGATCGCGGAGGCCTACTCGTGCAAGGACCTCCAGGA
GGCGTGCCGGAACTTCGCGGCGTGCAGGGGGTTGAGATTGCTGCCTAACCTAGGAAACATACAGAGCGCGATAAGGAAGA
GGTTAACGTCCAGCGGCGCCGCTGCTCCGGCGACGAGGAGGATCATGGACATGGCGTCCACGAGTGGCGCTGACACTGAG
TGAAGTTTTTTTTTCATGGTAATACGTGTCTCATTTATATCATAACGACCATAATATAAGTCACGTACATAACGACCTAA
CAAAACTGAAAAGACAGCAGAACGCTAGCCTTTGCACACAGGAACATCAGTCAAGAAGTAAAATTACAAATAAGACTGAA
GAATCCTCTGAGCTTGACACCAACGCCCGTCACCTGCCTCGGGCAACACCATAGCAGCCATCAAAGGAGGAAATGACGGA
TCACCTCCACACCCGAGCTCGACGCGGCTCCATCGCTGATATGCAGCTTTGCGGACCTCCAAGGTGGCTCGCCAATAAAG
GCGAAGACATTGCCGTTGAATGAATCAGACCGGGGCAACACCCTCGACACGTCATCGAACTCCAGATCTGGCACCCCCGC
CCAACTAAGACGTTGGAGGAGGAAACCATACCTGCATGCCACGAACCACGAACCCAGATCCACCATCTTCCAGATGCCGT
CGACGCAGACCACAATCTGCATCCGCTCCTGGACTACCTCCCAAGCTCCACGCCG-GCGCTGGAGCAAACGCCGTCGC-A
ACAGCGAAGCCCGAGGACACAGGTTCACCACGAGGAT---------GCCGCCG---CACCATCCTTGCTTGAACAGTCTG
GTTTTCAAATCCACCCCTAAAGCGGATCGTCTTGTT-GGGAAGGATCTGAAGATTTATTAGTCGGCGCCGCCATCGC--A
ATCGCCGAAGCCATGACGATGAACAACCCAAAATTCTAAG-AAACTAATGCCTAAAACAATCCACATGCATGGATCCGGC
GACCCCCCTCACCACCGATGTATGTGTACATG---CATGCATGCATATGGTACGTACGTATACTTATTAGGGTAACCGGT
CAGACTACATACATTATGGTACGTATATATACAGTACAGTACTTAGTAGCGACTGTATAGTGCTGATCTGATCGATATAG
CTAGTTTTGTTTTAGGATTGTGCTAATGTCCAGTCGACTGGACGTTAAGCAACGTATCCGCACG
>chr2A_522
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-----------------------------------------GGTCGTGCTCCCCATCTAGCTGGTTGCAGCACCGCCTTT
GCCGGTACAGCTAGGCCTCGGCGGTTCGCAGCGGTGGCTGAGTGAACAGAGGGATCTATCAGCATGTACAATGATTGATA
CGGTAGTCTTAAGTCTTGTATGTAATTTAGAAATGACAAAAAAAATGTCTACAATAAGTCATCTCTTATTCTTATCTTTA
ATAACTAGCTATTCGTAAAAACGTGGTGAGACCCATTTAGAGAGGACAAACTTTTTCTTATGAGTTCTTTCTTCTCCACC
TTATCATTTATCTACATGTCACTTCTAAGATAGCACCATTGTACATGCCCGTTGGCAAATAGTATAGAAAATTAAGGTGG
TGTTTGGTTCTCTAGTCATATGACTTTTTCTAGTTCGTAGGACTTTTTGAAAAAGACTCTCAAGGAGGTGCTTCTAAGGA
CTTTTAGCAAAAAGTTCCACCTTATTTGATTTGTTAGGGATTTTTTCTAATCCCAACACAAAAAAGTCCCTGGAACCAAA
CACCCCCTAAGACTTTGCTGTCTACGTTCCAAGATGCTAGAGTTTCTTGG-TGCGTCGATCTGCAAACAATATGAACAAA
GTCGCACATATCCTAGCTAGGAAGGATTGTTGTAAGTCGTTATGTAAAACTTGGTTTCATGTGGCTCCCAAGTGTATTAG
CTCGGAGATTACCGCAGAGGAGGTTGTGAACTTTGAATAAAATGGCAACGTTTACCAAA----AAAAAGTGATAGGATTA
CATCAATTTGAAA---GTTTTTTTTGTGACATGAAGTTTGAAACTTTGAATCAACGGAGACCAATGATC---CGACGATT
GTTGGGATTAGAGTTTGATCAACGTGCGATCGTGACGGTCGCGAGTACTGTAGTAGGAGTATATATTCAACCCTGACCAC
CAACGACCTACCGAAACAGCCCGGATCGATATGGCACTGGCAGCCGCCCCTTGTGTTGCCGACGG---------CACGGC
GGTGACGGGGTCGGTGAGCGAGGTGCCCAAGGTGACGGGCACGCATGACTTCACGATCTGCGAGTACAGCCGTACCAAGG
GCATTGGCGTCGGCAAGTCGATCCTGTCGCAGCACTTCTCCGTCGATGGCCGGCGGTGGCACATCCGCTTCTATCCGGAC
GGCTACAGCACGGCGGACGGCGGGTGGATCGCCTTGTACGCGCAGACGCTCCACAAGCCGCAGTTCCTTCCCGTGAGCGC
CGAGTTCACCTTCCAGCTCCTCGGCCCCGACGGCGACGTCCGCCCCACGCGGCGGTCCGACCGGGCCTGCAAGTACGACA
CCTTGTGCAACAGCTGGGGCATCCGGCGCTACATCACCCGGGCGCACCTCGAGAGCGCGGCGCTGGGCGCCATC------
--------------------------CACGATCCACAAGGCGCGGAGGAGGAGCCTCTCCGTCAACCGCCCGGGGCTCGT
CAAGATGCCGCCGCCGCCGCTGTCGAACCACGGGGAGAACGCCATCCGGTTCCTGGCCAGCGGGAAGGCCCCGTTCGACG
TGCGGATCGAGGTGGACGGCGAGGTGTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGTCGGCGTGGTTCGAAGGCCTC
CTCTACGGCCACGGCCGCGAGGCGG------GGAAAGATCTACTGCTCGAAGTAGGCGGCGGCATCGTCACCGCGGAGGC
GTTCAGGGGCGTGCTCCACTTCATCTACACGGACGAGATCCCCGGCGAGGCCGCC------------AAGGGGAGGGGGT
CGTACGACGTGACGCTGCGGCTGTTGGTGGCCGCCGAATACTACCTCATCGACAGGCTGAAGCTGATGTGCGCGTGCAGG
CTGGGCGACTTCATCAAGGACTCCACCGTGGGCACGCTCATGGAGATCGCGGAGGCCTACTCGTGCAAGGACCTCGAGCA
GGCGTGCCGGAACTTCGCGGCGCGCAGAGGGCTGAGATTGCTGCCTAACCTAGCAAACATACAGAGCGCGATAAGGAAGA
GGTTAACGTCCAGCGGCGCCGCTGCTCCGGCGACGAGGAGGATCATGGACGTGGCATCCACGAGTGGCGCTGACGCTGAG
TGAAGTTTTTTTTG------------------------------------------------------------------
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----------------------TGTGTGCATG---CATGCATGCATATGGTACG-ACGTATACTTATTAGGGTAACCTGT
CAGACTACATACATTATGGTACGTATATAAACAGTAC-----TTAGTAGCGGCTGTATAGTGCTGATCTGATCGATATAG
CTTGTTTTGTTTTA--------------------------------------------------
>chr2B_952
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GCTGGGATTAGAGTTTGATCAACGTGCGATCGTGACGGTCGCGAGTACGT-------AGTATATATTCAACCCTGACCAC
CAACAACCAACCTAAACAGCCCGGATCGATATGGCA------GCCGCCCCTTCCGTTGCCGACGGCCGCGATCTCACGGC
GGTGACGGGCTCGCTGAGCGAGGTGCCAAAGGTGACGGGCACGCACGAGTTCACGATTCGCGAGTACAGCCGTACCAAGG
GCATGGGCGTGGGCAAGTCGGTCGTGTCGCAGCACTTCTCCGTCGATGGCCGGCGGTGGCACATCCGGTTCTACCCGGAC
GGCTACAGCACGGCGGACGGCGGATGGATCGCCTTGTACGCGCAGACGCTCCACAAGCCGCAGCTCCGCCCCGTGAGCGC
CGAGTTCACCTTCCAGCTCCTCGGCCCCGACGGCGACGTCCGGCACACGCGCCGGTCCGACCGGGCCTGCAAGTACGACA
CCATGTGCAACAGCTGGGGCATCCGGCGCTACATCACCCGGGCGCACCTCGAGAGCGCGGCGCTTGGCGCCATCCACGCC
GACTCCATCACCGTGTGCTGCACCGTGACGATCCACAAGGCGCGGAGGAGGAGCCTCGCCGTGAACCGCCCGGGGCTCGT
GAAGATGCCGCCGCCGCCGCCGTCGAGCCACGGGGAGAACGCCATCAGGTTCCTCGCCCGCGGGAAGGTCCCCTTCGACG
TGCGGTTCGAGGTGGAGGGCGAGGTGTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGTCGCCGTGGTTCGAGGGCCTC
CTCTACGGCCACGGCCGCGAGGCGGCCACGGGGAAGGACGTGCTGCTCCAAGTAGGCGGCGGCATCGTCACGGCGGAGGC
GTTCAGGGGCGTGCTCCACTTCATCTACACCGACGAGCTCCCCGGCGAGGCCACCGCCAAGGGGAGGAAGGGGAGGGGGT
CGTACGACGTGACGCTGCGGCTGTTGGAGGCCGCCGACTACTACCTGATGGAGAGGCTGAAGCTGATGTGCGCGTGCAGG
CTGGGCGACTTGATCAAGGACTCCACCGTGGAGACTCTGATGGAGACCGCGGAGGTCTACTCGTGCAAAGACCTCGAGCA
GGCGTGCCGGAACTACGCGGCTCGCAGGGGGCTGAGATTGCTGCCAAACCTAGAAAACATACAGAGCGCCATAAGGAAGA
GATTAACGTCCA---GCGCCGTTGCTCCGGCGACGAGGAGGATCATGGACGTGGCATCGACGAG------TGGCGCTGAG
TGAAGTTTTTG-TG------------------------------------------------------------------
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----------------------TGTGTGCATGCATCATGCATGCATATGGTACGTGCGTATACTTATTAGGGTAACCTGT
CAGACTACATACATTATGGTACATACATATACAGTAC-----CTAGTAGCGGCTGTATAGCGCTGATCTGATCGATATAG
CTAGTTTTGTTTTA--------------------------------------------------
>chr2D_1048
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-------------------------TCGACATGGGC------GTCGGCCCTTCCGTCGCCGACGGCGGCGACACCACGGC
GGTGACGGGGTCCATCAGCGAGGTGCCCAAGGTGTCCGGCACCCACGAGTTCACGATCCGCGAGTACAGCCGCACCAAGG
GCATGGGCGTGGGCAAGTCGATCCTGTCGCAGTACTTCTCCGTCGACGGCCGCCGCTGGTACATCCGCTTCTACCCGGAC
GGCTACAGCACGGCCGACGGCGCGTGGGTCGCCTTCTACGCGCAGACGCTCTACAAGCCGCAGTTCCGCCCCGTGCGCGC
CGAGTTCACCTTCCAGCTCCTCGGCCCCAACGGCGACGTCCGCCACACGCGCCGCTCAGATCGCGCCTGCAAGTACGACA
CCTTCTGCAACAGCTGGGGCATCCGCCGCTACATCACCCGGGAGCAGCTCGAGAGCGCGGCGCTCGGCGCCATCCACGCC
GACTCCATCACCGTGCGCTGCACCGTCACGATCCACCTGGCGCGGAGGAGGAGCCTCGCGATCAACCGCCCGGGCCTCGT
CCAGATGCCGCCGCCGCCGCCGTCCAACCACGGGGAGAACGCCCTCAGGTTCCTCGCCGGCGGGAAGGCCCCCTTCGACG
TGCGCTTCGACGTGGACGGCGAGATCTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGTCGGCGTGGTTCGAGAGCCTC
CTCTACGGCCACGGCCGCGAGGCGG------GCAAGGACGTC---CTCGAGGTCGGCGGCGGCATTGTCACCGCGGAGGC
GTTCCGGGGCGTGCTCCACTTCATCTACACCGACGAGCTGCCCCCCGAGGCCGCC------------AAGGGGAGGGGGT
CGTACGACCTGACGCTGCGGCTGTTCGAGGCGGCCGACTACTACCTCATCGAGAGGCTGAAGCTGATGTGCGCGTGCAGG
CTGGGCGACTTCATCAAGGACTCCACCGTGGACGAGCTCATGGAGATCGCGGAGGACTACTCGTGCAAGGACCTCGGGCA
GGCGTGCCGGAACTTCGCGGCGCGCAGGGGCCTGAGTTTGGCA------------------------GCGATAAAGAGGA
GATTATTGTCCA---GCGGCGCTGCTCCGGCGACGAGGAGGATCATGGACGTGCCG------------------------
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>chr2B_1048
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-------------------------TCGATATGGGC------GTCGGCCCTTCCGTCGCCGACGGCGGCGACACCACGGC
GGTGACGGGGTCCATCAGCGAGGTGCCCAAGATATCCGGCACCCACGAGTTCACGATCCGCGAGTACAGCCGCACCAAGG
GCATGGGCGTGGGCAAGTCGATCCTGTCGCAGTACTTCTCCGTCGACGGCCGCCGGTGGTACATCCGCTTCTACCCGGAC
GGCTACAGCACGGCCGACGGCGCCTGGATCGCCTTCTACGCGCAGACGCTCTACAAGCCGCAGTTCCGCCCCGTGCGCGC
CGAGTTCACGTTCCAGCTCCTCGGCCCCAACGGCGACGTCCGCCACACGCGCCGATCCGATCGGGCCTGCAAGTACGACA
CCTTCTGCAACAGCTGGGGCATCCGCCGCTACATCACCCGGGAGCAGCTCGAGAGCGCGGCGCTCGGCGCCATCCACGCC
GACTCCATCACCGTGCGCTGCACCGTCACGATCCACCTAGCGCGGAGGAGGAGCCTCGCGATCAACCGCCCGGGCCTCGT
CCAGATGCCGCCGCCACCGCCGTCGAACCACGGGGAGAACTCCCTCAGGTTCCTCGCCGGCGGGAAGGCCCCCTTTGACG
TGCGCTTCGACGTGGACGGCGAGATCTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGTCGGCGTGGTTCGAGAGCCTC
CTCTACGGCCACGGCCGCGAGGCCG------GGAAGGACGTC---TTCGAAGTCGGCGGCGGCATTGTCACCGCGGAGGC
GTTCCGTGGCGTGCTCCACTTCATCTACACCGACGAGCTGCCCCCAGAGGCCGCC------------AAGGGGAGGGGGT
CGTACGACCTGACGCTGCGGCTGTTCGAGGCGGCCGACTACTACCTCATCGAGAGGCTGAAGCTGATGTGCGCGTGCAGG
CTGGGCGACTTCATCAAGGACTCCACCGTGGACGCGCTCATGGTGATCGCGGAGGACTACTCGTGCAAGGACCTCGCGCA
GGCGTGCCGGAACTTCGCGGCGCGCAGGGGCCTGAGTTTGGCA------------------------GCGATAAAGAGGA
GATTAGTGTCCA------GCGCTGCTCCGGCGACGAGGAGGATCATGGACGTGCCG------------------------
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>chr2A_1091
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--------------------------------------------------------------------------CACGGC
GGTGACGGGATCCATCAGCGAGGTGCCCAAGGTGTCCGGCACCCACGAGTTCACGATCCGCGAGTACAGCCGCACCAAGG
GCATGGGCGTGGGCAAGTCGATCCTGTCTCAGTACTTCTCCGTCGACGGCCGCCGCTGGTACATCCGCTTCTACCCGGAC
GGCTACAGCACGGCCGACGGCGCCTGGGTCGCCTTCTACGCGCAGACGCTCTACAAGCCGCAGTTCCGCCCCGTGCGCGC
CGAGTTCACCTTCCAGCTCCTCGGCCCCAACGGCGACGTCCGCCACACGCGCCGGTCCGATCGCGCCTGCAAGTACGACA
CCTTCTGCAACAGCTGGGGCATCCGCCGCTACATCACCCGGGAGCAGCTTGAGAGCGCCGCGCTCGGCGCCATCCACGCC
GACTCCATCACCGTCCGCTGCACCGTCACGATCCACCTGGCGCGGAGGAGGAGCCTCGCCATCAACCGCCCGGGCCCCGT
CCAGATGCCGCCGCCGCCGCCGTCCAACCACGGGGAGAACGCCCTCAGGTTCCTCGCCGGCGGGAAGGCCCCCTTCGACG
TGCGCTTCGACGTGGACGGCGAGATCTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGTCGGCATGGTTCGAGAGCCTC
CTCTACGGCCACGGCCGCGAGGCGG------GCAAGGACGTC---CTCGAGGTCGGCGGCGGCATTGTCACCCCGGAGGC
GTTCCGGGGCGTGCTCCACTTCATCTACACCGACGAGCTGCCTCCCGAGGCCGCC------------AAGGGGAGGGGGT
CGTACGACCTGACGCTGCGGCTGTTCGAGGCGGCCGACTACTACCTCATCGAGAGGCTGAAGCTGATGTGCGCGTGCAGG
CTGGGCGACTTCATCAAGGACTCCACCGTGGACGCGCTCATGGAGATCGCGGAGGACTACTCGTGCAAGGACCTCGCGCA
GGCGTGCCGGAACTTCGCGGCGCGCAGGGGCCTGAGTTTGGCA------------------------GCGATAAAGAGGA
GATTATTGTCCA---GCGGCGCTGCTCCGGCGACGAGGAGGATCATGGACGTGCCG------------------------
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>chr5B_2198
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-------------------------------------------------------------------------------G
TGAGTTTTTTTTTGCATGGTAATACGTGTCTCATTTATATCATAACGACCATAGTACAAGTCACGTACATACCGACCTGA
CAAAACTAAAAAGATAGCAGAACGCTAGCCTTTGCACACAGGAACATCAGCCAAGAAGTAAAATTACAAACAAGACTGAA
GAATCCTCTGAGCTTGACACCAACCCCCGTCACCTGCCTTTGGCACCACCGTAGCAGCCACCAAAGGAGAAAATGATGGA
TCATCTCCACATACGAGCTCGAGGCGGCTCCATCGCTGATATGCAGCTTTGCGGACCTCCAAGGTGGCTCGCCAATAAAA
GTGAAGCCATTGCCGTTGAACGAATCAGACCGGGGCAGCATCCCAGACACACCATCGAACTTCAGATCTGACACCCCCGC
CCAACTAAGACGTTGGAGGAGGAAACCATACCTGCATGCCACGAACCACGAACCCAGATCCACCATCTTTCAGATGCCGT
CGACGCAGACCACAATCTGCATCCGCTCCTGGACTACCTCCCAAGCTCCACGCCG-GCGCTGGAGCAAATGCCGTCGCAA
-CAGCGAAGCCCGAGGACACAAGTCCACCACGAGGAT---GCAGCCGCCGCCG---CACCATTCTTGCTTGAACAGTCTA
GTTTCCAAATCCACCCCAAAAGCGGATCGTCTCGTTGGGGAAGGATCTGAAGATTTATTAGTCTGCGCCGCCATCGC--A
ATCGCCGAAGCCATGACGATGAACAACCAAATTTTTAAAA-AAACTAAGGCCTAAAACAGTCCACACGCGTGGATCCAGC
GACCCCCCTCACCACCGA--------------------------------------------------------------
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>chr1D_2202
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---AGCTTTTTTTTCATGGTAAGACGTTTCTCATTTATATCAAAAGGATCATAGTACAAGCCACGTACATACCGACCTGA
CAAAACTGGAAAGACAGCACAACGCTAGCCTTTGCACACAGGAAAACCAGCCAAGAAGT-AAATTACAAACAAGACTGAA
GAATCCTCTGAGCTTGACACCAACGCCCATCACCTGCCTCTGGCACCACCATAGCAGCCACCAAAGGAGAAAATGATGGA
TCACCTCCATACCCGAGCTCGACGCGGCTCCATCGCTGATATGCAGTTTTGCGGACCTCCAAGGTGGCTCGCCAATAAAG
GCGAAGCCATTGCCGTTGAACGAATCAGACCGGGGCAACACCCCGGACACGCCATCAAACTCTAGATCTGGCACCCCCGC
CCAACTAAGACGTTGGAGGAGGAAACCATACCTGCATGCCACGAACCACGAACCCAGATCCACCATCTTCCAGATGCCGT
CGATGCAGACCACAATCTGCATCCGCTCCTGGACTACCTCCCAAGCTCCACGCCG-GCGCTGGAGCAAACGCCATCGCAA
-CAGCGAAGCCCGAGGACACAGGTCCACCACGAGGAT---GCCACCGCCGCCG---CACCATCCTTGCTTGAACAGTCTG
GTTTCCAAATCCACCCCAAAAGCGGATTGTCTCGTTGGGGAAGGATTTAAAGATTTATTAGTCGGCGCCGCAAT--CGTC
ATTGCCGTAGCCATGACGATGAACAACCCAAAATTCTAAAAAAACTAAGGCCTAAAACAATCCACACGCGTGGATCCAGC
GACCCCCCTCACCACCGA--------------------------------------------------------------
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>chr2D_2203
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----GTATTTTTTTCATGATAATACGTGTCTTATTTATATCATAACGACCATAGTACAAGTCACGTACATGCCGACCTGA
CAAAACTGAAAAGACAGCCGAACGCTAGTTTTTGCACACAGGAACATCA-GCAAGAAGTAAAATTACAAACAAGACTGCA
GAATCCTCTGAGCTTGACACCAACGTCCTTCACCTGCCTCTGGCACCATCATAGCAGACACCAAAGGAGAAAATGACGGA
TCACCTCCACACCCGAGCTCGACGCGGCTCCATCGCTGATATGCAGCTTTGCGGACCTCCAAGGTGGCTCGCCGATAAAG
GCGAAACCATTGCCGTTGAACGAATCAGGCCGGGGCAACACTCCGGACACGCCATCGAACTCCAGATCTGGCACCCCCGC
CCAACTAAGACGTTGGAGGAGGAAACCATACCTGCATGCCACGAACCACGAACCCAGATCCACCATCTTGCAGATGTCGT
CGATGCAGACCACAATCTGCATCCGCTCCTGGACTACCTCCCAAGCTCCACGCCG-GCGCTGGAGCAAACGCCGTCGC-A
-CAGCGAAGCCCGAGGACACAGGTCCACCACGAGGAT---GCCACCGC---CGCCGCACCATCCTTGCTTGAACAGTCCG
GTTTCCAAATCCACCCTAAAAGCGGATCGTCTCGTTGGGGAAGGATCTGAAGATTTATTAGTCGCCGCCGCCAT--C--A
ATCGCCGAAGCCATGACGATGAACAACCCAAAACTCTAAT-AAACTAAGGCCTAAAACAATCCGCACGCGTGGATCCAGC
GACCCCCCTCACCACCGA--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr6D_2203
G-------------------------------------------------------------------------------
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-----TTCTTTTTTCATCGTAATACGTGTCTCATTTATATCATAACGACCATAGTACAAGTCACGTACATACCGACCTGA
CAAAACTAAAAAGACAGCAGAACGCTAGCCTTTGCACACAGGAACATCAGGCAAGAAGTAAAATTACAAACAAGACTGAA
GAATCCTCTGAGTTTGACACCAACGCCCGTCACCTGCCTCTGGCACCACCATAGAAGCCACCAAAGGAGAAAATGACGGA
TCACCTCCACACACGAGCTCGACGCGGCTCCATCGCTGATATGCAGCTTTGCGGACCTCCAAGGTGGCTCGCCAATAAAG
GCGAAGCCATTGCCGTTGAATGAATCAGACCGGGGCAACACCCCGGACACGCCATCGAACTCCAGATCTGGCACCCCCGC
CCAACTAAGACGTTGGAGGAGGAAACTATACCTGCATGCAACGAACCACGAACCCAGATCCACCATCTTCCAGATGCCGT
CGATGCAGACCACAATATGCATCCGCTCCTGGACTACCTCCCAAGCTCCACGCCG-GCGCTGGAGCAAACGCCATCGCAA
-CAGCGAAGCCCGAGGACACAGGTCCACCACGAGGAT---GCCGCCGCTGCCG---CACCATCCTTGCTTGAACAGTCTG
GTTTCCAAATCCACCCTAAAGGCGGATCGTCTCGTTGGGGAAGGATCTGAAGATTTAGTAGTCGGCGCTGCCAT--CGCA
ATCGCCGAAGCCATGACGATGAACAACCCAAAATTCTAAG-AAACTAAGGCCTAAAACAATCCACACGCGTGGATCCGGT
GACCCC--------------------------------------------------------------------------
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----------------------------------------------------------------
>chr3B_2204
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-----TTTTTTTTTCATAGTAATACGTGTCTCATTTATATCACAAGGATCATAGTACAAGCCACGTACATACCGACCTGA
CAAATCTGAAAAGACAGCAGAACGCCAGCCTTTGCACACAGGAACACCAGCCAAGAAGTAAAATTACAAACAAGACTAAA
GAATCCTCTGAGCTTGACGCCAACGCCCGTCACCTGCCTCTGACACCACCATAGCAGCCACCAAAGGAGAAAATGACGGA
TCGCCTCCACACCCAAGCTCGACGCGGCTCCATCGCTGATATGCAGCTTTGCGGACCTCCAAGGTGGCTCGCCAATAAAG
GCGAAGCCATTGCCGTTGAACGAATCAGACCGAGGCAACACCCCGGACACGCCATCGAACTTCAGATCTGGCTCCCCCGC
CCAACTAAGACGTTGGTGGAGAAAACCATACCTACCTGCCACGAACCACGAACCGAAATCCACCATCTTCCAGATGCCAT
CGATGCAGACCACAATCTGCATCCGCTCCTGGACTACCTCCCAAGCTCCACGCCG-GCGCTGGAGCAAACGTCGTCGC-A
ACGGCGGAGCCCGAGGACACAGGTCCACCACGAGGAT---GCCGCCGC---CG---CACCATCCTGGCTTGAACAGTCTG
GTTTTCAAGTCCACCCC-AAAGCGGATCGCCTCGTTGGGGAAGGATCTGAAGATTTATTAATCGACGCCGCCAT--CGCC
AGCGCCGAAGCCATGACGATGAACAACCCAAAATCCTAAA-AAACTAATGCCTAAAACAATCCACACGCTTGGATCCGGC
GATCCCCCTCACCA------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr7B_2204
TTTTTT--------------------------------------------------------------------------
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----------TTTGCATGGTAATATGTGTCACATTTATATCATATGGATCATAGTACAAGTCACGTACATACCGACCTGA
CAAAACTGAAAAGACAGCAGAACGCTAGCCTTTGCACACAGGAACACCAGCCAAGAAGTAAAATTACAAACAAGACTGAA
GAATCCTCTGAGCTTGACACCAACGCCCGTCACCTGCCTATGGCACCACCATAGCAGCCACCAAAGGAGAACATGACGGA
TCACCTCCACACCCGAGCTCGACACGGCTCCATCGCTGATATGCAGCTTTGCGGACCTCCAAGGTGGCTCGCCAATAAAG
ACGAAGCCATTGCCGTTGAACGAACCAGGCCGGGGCAACACCCCGGACACGTCATCGAACTCCAGATCTGGCACCCCCGT
CCAACTAAGATGTTGGAGGAGGAAACCATATCTGCCTGCCGCGAACCATGAACCCAGATCCACCATCTTCTAGATGTCGC
CGATGCAGACTACAATCTGCATCCGCTCCTGGACTACCTTCCAAGCTCCACGTCG-GCGCTGGAGCAAACGTCGTCGC-A
GGGGCGGAGCCGGAGGACACAGGTCCACCACGAGGAT---GCCGTCGTCGCCG---CACCATCCTTGCTTGAACAGTCTG
GTTTCCAAATCCACCCCAAAAACGGATCGCCTCGTTGGAGAAGGATCTGAAGATTTATTAGTCGGCGCCGCCAT--CGCC
ACTGCCGAAGCCATGACGATGAACAACCCAAAATTCTAAG-AAACTAATGCCTAAAACAATCCACACGGATGGATCCGGC
GGCCCCCCTCACCACCGA--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr6D_2205
--------------------------------------------------------------------------------
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------TTTTTTTACATGATAATACGTGTCTCATTTATATCATAACGACCATAATACAAGTCATGTACATACCGACCTGA
CAAAACTGAAAAGACAGTAGAACGCTAGCCTTTGCACACAGGAACATCAGCCAAGAAGTAAAATTACAAACAAGACTGAA
GAATCCTCTGAGCTTGATACCAATGCCCGTCACCTGCCTCTGGCACCACCATAGCAGCCACCAAAGGAGAAAATGACGGA
TCACCTCCACACCCGAGCTCGACGCGGATCCATCGCCGATATGCAGCTTTGCGGACCTTCAAGGTGGTTCGCCAATAAAG
GCAAAGCCATTGCCGTTGAACGAATCAGACCGGGGCAACACCTCGGACACGCCATCGAACTCCAGATTTGGCACCCCCGC
CCAACTAAGACGTTGGAGGAGGAAACCATACCTGCATGCCACG-------AACCCAGATCCACCATTTTCTAGATGCCGT
CGATGCAGACCACAATCTGCATCCGCTCCTGGACTACCTCCCAAGCTCCACGCCG-GCGCTGGAGCAAACGCCGTCGC-A
ACAGCGAAGCCCGAGGATACAGATCCACCACGAGGAT---GCCGCCGCTGCCG---CACCATCCTTGCTTGAACAGTCTG
GTTTCCAAATCCACCCCAAAAGCGGATCGTCTCGTTGGGGAAGGATCTGAAGTTTTATTAGTCGGCGCCGCCAT--CGCA
ATCGCCGAAGCCATGACGATGAACAACCCAAAATTCTAAG-AAACTAAGGCCTAAAACAATCCACACACGTGGATCCGGC
GACCCCCCTCACCACCGA--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr4D_2206
--------------------------------------------------------------------------------
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-------TTTTTTTCATGGTAATACGTGTCTCATTTATATCATAAAAATCATAGTACAAGTCACGTATATACCGACCTGA
CAAAACTGAAAAGACAGCAGAACGCTAGCCTTTGCATACAGGAACACCAGTCAAGAAGTAAAATTACAAACAAAACTGAA
GAATCCTCTGAGCTTGACACCAACGCCCGTCACCTGCCTTTGGCACCACCATAGCAGCCACCAAAGGAGAAAATGACGGA
TCACCTCCACAACCGAGCTCGACGCGGCTCCATCGCTGATATGCAGCTTTGCGGACCTCCAAGGTGGCTCGCCAAAAAAG
GCGAAGCCATTGCCGTTGAACGAATCAGACCGGGGCAACACCCCGGACACGCCATCGAACTCCAGATCTGACACCCCCGC
CCAACTAAGACGTTGGAGGAGGAAACCATACCTGCCTGCCACGAACCATGAACCCAGATCCACCATCTTCCAGATGCCGT
TGATGCAGACCACAATCCGCATCCGCTCCTGGACTACCTCCCAAGCTCCACGCCG-GCGCTGGAGCAAATGTCGTCGC-A
GCGGCGGAGCCCGAAGACACAGGTCCACCACGAGGATGTCGCCGC---CGCCG---CACCATCCTTGCTTGAACAGTCTG
GTTTCCAAACCCACCCTAAAAGCGGATTGCCTCGTTGGGGAAGGATCTGAAGATTTATTAGTCGGCGCCGCCAT--CGCC
ACCGTCGAAGCCATGGCGATAAACAGCCCAAAACCCTAAG-AAACTAAGGACTAAAACAATCCACACGCGTGGATCCTGC
GACCCCCCTCACCACCGA--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr7D_2207
--------------------------------------------------------------------------------
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--------TTTTTTCATGGTAATACGTGTCTCATTTATATAATAAGGATTATAGTACAAGCCA-GTACATACCAACCTGA
CAAAACTGAAAAGACAGCAGAACGCTAGCCTTTGCACACAGGAACACCAGCCAAGAAGTAAAATTACAAACAAGACTGAA
GAATCCTCTGAGCTTGACACCAACACCCGTCACCTGCCTCTGGCACCACCATAGCAGCCACCAAAGGAGAAAATGACGGA
TCACCTCCACACCCGAGCTCGACGCGGCCCCATCGCTGATATGCAGCTTTGCGGACCTCCAAGGTGGCTCGCCAATAAAG
GCGAAGCCATTGCCGTTGAACGAATCAGACCGGGGCAACACCCCGGACACGCCATCGAACTCCAGATCTGGCACCCCCGC
ACAACTAAGATGTCGGAGGAGGAAACCATACCTGCCTGCCACGAACCACGAACCCAGATCCACCATGTTCCAGATGCCGT
CGATGCAGACCACAATCTGCATCCGCTCCTGGACTACCTCCCAAGCTCCACGCCGCGCGTGAGAACAAACGCCGGCGC-A
ACGGCGGAGCCCGAGGACACAGGTCCACCACGAGGAT---GCCGC---CGCCG---CACCATCCTTGCTTGAACAGTCTG
GTTTCCAAATCCACCCCAAAAGCGGATCACCTCATTGGGGAAGGATCTGAAGATTTATTAGTCGGCGCCGCCAT--CGCC
ACCGCCGAAGCCATGACGATGAACAACCCAAAATCCTAAG-AAACTAATGCCTAAAACAATCCACACGCGTGGATCTGGT
GACCCCCCTCACCACC----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>SNPs
SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S------S---------------------
----------------S---------------S-----SS----------------------SSS---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-----S-----S--S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---S---------S-----------S-------
-----S--------------S----S---S--------S----------------------------SSS----------
-----------------------S-S---------------------------S--SS-SSSS------S----------
S------------SSS---------S-------S----------SS----------------S-S-SS-SSS--------
-------------------------------------S-----S---SSS------------------------------
S-S----S--------------------------------------S---S------------------S--S-------
----------S----------------S-S--------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------S-----------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S---------------------------------------------------S------------------
--------------------------------------------------------------S-------S---------
--------------------------------------------------------------------------------
------------------------------------------------S--S---------------------S------
-------S------------------------------------------------------------------------
--------------------------------S------------------------------------------S--S-
----------------------S--------S---------------------S--------------------------
--------------------------------------------------S-----------------------S-----
--------------------------------------------------------S--------------S------S-
----------------------------------------------------------------------S---------
----------------------------------------S----S--------------S--------S----------
--------------------------------------------------------------------------------
------S------------------------------------SS-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-----------------S--------------S-----------------------------------------------
------------------------------------------------------------------S-------------
------------------SSSS-----S-------------------------------------------------S--
-------------------------------------SSSSS---------S----------------------------
--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1224
--------------------------------------------------------------------------------
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----GAGATTACCGCAGAGGAGGC--------------------------------------------------------
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----------------------------------------------------------------
>reverse_3005
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------CGACACGTCATCGAACTCCA----------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
