>input_sequence_57702
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----------------------------------------ATGCGTAGGAACAG---GCCGCGGCAGAGCGCAGCGTCCA
TCGAACTGGAAGACGACGAGCACATCATAACCGAACTTGAGCTCTGGCAAGGGATGGGACCTAGGCGGTTCTGCCACACC
GAGCTTGCCGCCGCAACGGACAACTTCGCCGAGGAGAGGAAGATAGGGAGAGGG-GGGTTCGGTTCGGTGTATAGGGGCT
ACTTGAGTGACCAAGACCGTCATGTGGCCATCAAGACGCTCT------------CACAGGAGCTGT---CGGTGCAGGGG
CTCCGGGAGTTTCAGGCAGAGGTCGCCATCATGAGCCAGCTTAGGCACCGCAACATAGTCCAGCTCGTGGGCTGGTGCC-
--GTCGTCGGAGAGGAGGA---------------CTGGCGCTCGTCTACGAGCTCGTGGACGGAGGCAGCCTCGACACCC
ATCTCTACAATCCCGACAGATGCTTAACTTTGTCGGAG-------AGGTAGATCTCCTTCCGCGTAGACC----------
AAACTTGATCTAAAAATTCAAGGCTG-------------ACACCCAAACTCTGCCCTCGCCACCATCACTGCAGGTACAA
TATCGCGCTCGGCCTGGGCTCCGCCCTGCGGTACCTCCACACGGACTGCCACCAGTGCGTCGTGCACGGCGACATCAAGC
CCGCGAACGTGATGCTCGAGGCATCAGGCAGCGCTAAGCTCGGCGACTTCGGGCCCGCGAGGCTCGTCGACCACGGAGCC
GAGCCACGGACGACGCAGGTCGTCGCGGGGACCCTCGGGTACATCGACCCAGAGTTCGTCAGCAGCCGCCGGCCGAGGGC
CGAGTCCGACGTGTACAGCTTCGGCGTCGTGCTCCTCGAGATCGCCTGTGGCAGGCGGCCCGCGTCGAGGCGAACCGG--
-CCAGGCCTCGGCGGCGCTGCTGACCTCGGTCCGCGACTTGTACCACCGGAACCTGATCGTGGACGCGGCGGACCGGAGC
C----TGGCGAGTTTGACAAGCTGCAGATGGAGCGTCTGCTCGTGACGGGGCTTTGGTGCGCGCACCACGACCGGTTGCA
GCGGCCGTCCGTTACGCAGGCTATGGATGTGCTACGGTCCGAAGACGCCAGGTTGCCGGTGCT---TGTAGCGATAGCGA
TGCCTGGTTCCGGGGAG------ATTCGATCGTTGGAGGGGCAGGCTTATGGCGATGTGTCTGACGACAACTCTGGTTAC
TTGAATGAATCAACTGAAACTGCGTACCTTA---CTA---GCGAGGAGTGA-----------------------------
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>chr5D_1_TraesCS5D01G455600
TGGATTGGTCGGTTTCACGTGCGCGGTGCTGCTTTCCGTTTCTGGCTGTCTGGTCGCGCGCGCGGGCGGCTCCTTCCTTT
TTTGGGAGAGCGCTCGGGGCTGCGCTCGGGCGCCCGTGCGCCCGCGAGCCACGTCCATCGTTAATTGATGATTACTCTAT
AAAACTGACCGCGTAAACTGAAAGGGGTTTACCGCGAAATTCCTACCGTCCTGGGCTCCGCTTACTAAGCTCCCTCGCTG
CTTGCACTGGTCAACCGAGCCACCCCAGGAGCAACACCAGCACACCACCATGGCTGGCTGCAACGCAAGAATCCGTATCT
TGCTCGTACTATACGGCGCCTCCTACCTCGCGCCCAACGCCGCCGCACTCTCCGTCAACTGCAGCGGCCCGGATCATCGC
CGCGAGGCGATCTCTCGCCATGATACGTCCCTTGCAGGTAACACCACCATAGGCATGTTCAGTGTCCTCGCATTGGGTTG
GTGCTCTAGCAGTAGCAGGGCGCTGCCTTACATCCCCTCCGTCGACCCAGCAGTTACCCTCCGCGGTTCAACCGTCACCA
GGCATGTAATCCCCACCACCACTGATGTTGATTCAAGTTTTGACGGCCCCGTGATGGCGAAATGGGAAGGAGAACATTTT
AACTGCAGCGGCAGGTTTTTGTCTAGTCTCCTTTTCGCGTTCGAAGAACAACAAATTGCAACTGTGGCAAGAAATTACTC
TGGTGGTTCTGCTGGAAGTTTGGGACTTCCTAACATTACATGTTACACATATTTCGTCCACCGGAATTTAACCGCGCCTC
AGCCGCCGTACCCCTTTGGCCTCACTGACGAAGCTATGGCGCGAAGATTGTTGTCCGGTACACATGGCCGGAGAGCGACG
AGGAAACAGCAGGCAGCAGCACACGGGAAGGTCGCATCGTCGCGGCTGAAGCAAGCAGCTGTCGCCGTTTCGGCTTTAGT
CGGGTTGGTTTGCGCCGTGGCAGCCCTTCTGCGCTGCTGCATGCGTAGGAACAG---GCCGCGGCAGAGCGCAGCGTCCA
TCGAACTGGAAGACGACGAGCACATCATAACCGAACTTGAGCTCTGGCAAGGGATGGGACCTAGGCGGTTCTGCCACACC
GAGCTTGCCGCCGCAACGGACAACTTCGCCGAGGAGAGGAAGATAGGGAGAGGG-GGGTTCGGTTCGGTGTATAGGGGCT
ACTTGAGTGACCAAGACCGTCATGTGGCCATCAAGACGCTCT------------CACAGGAGCTGT---CGGTGCAGGGG
CTCCGGGAGTTTCAGGCAGAGGTCGCCATCATGAGCCAGCTTAGGCACCGCAACATAGTCCAGCTCGTGGGCTGGTGCC-
--GTCGTCGGAGAGGAGGA---------------CTGGCGCTCGTCTACGAGCTCGTGGACGGAGGCAGCCTCGACACCC
ATCTCTACAATCCCGACAGATGCTTAACTTTGTCGGAG-------AGGTAGATCTCCTTCCGCGTAGACC----------
AAACTTGATCTAAAAATTCAAGGCTG-------------ACACCCAAACTCTGCCCTCGCCACCATCACTGCAGGTACAA
TATCGCGCTCGGCCTGGGCTCCGCCCTGCGGTACCTCCACACGGACTGCCACCAGTGCGTCGTGCACGGCGACATCAAGC
CCGCGAACGTGATGCTCGAGGCATCAGGCAGCGCTAAGCTCGGCGACTTCGGGCCCGCGAGGCTCGTCGACCACGGAGCC
GAGCCACGGACGACGCAGGTCGTCGCGGGGACCCTCGGGTACATCGACCCAGAGTTCGTCAGCAGCCGCCGGCCGAGGGC
CGAGTCCGACGTGTACAGCTTCGGCGTCGTGCTCCTCGAGATCGCCTGTGGCAGGCGGCCCGCGTCGAGGCGAACCGG--
-CCAGGCCTCGGCGGCGCTGCTGACCTCGGTCCGCGACTTGTACCACCGGAACCTGATCGTGGACGCGGCGGACCGGAGC
C----TGGCGAGTTTGACAAGCTGCAGATGGAGCGTCTGCTCGTGACGGGGCTTTGGTGCGCGCACCACGACCGGTTGCA
GCGGCCGTCCGTTACGCAGGCTATGGATGTGCTACGGTCCGAAGACGCCAGGTTGCCGGTGCT---TGTAGCGATAGCGA
TGCCTGGTTCCGGGGAG------ATTCGATCGTTGGAGGGGCAGGCTTATGGCGATGTGTCTGACGACAACTCTGGTTAC
TTGAATGAATCAACTGAAACTGCGTACCTTA---CTA---GCGAGGAGTGAGCTTATCTTTAGTCCCGGCAGGACAAGTA
TCGATACATCCACAAATGTAGTGCTCCAGGTTAGATTGTCATTGTCACTTGCATGTCCACGGTCACCTTGGTGCAGTAT-
---TGGATAAATGGTTCGCCGTTTTATTAAACATTATCCTCTACTTTTCGGTTTTTCGCGCTTAACTATTTGAGTTTTCA
ATATTTATCCTCCAATAAAGGAGGGGAAATGATTGGGATCACCCAACAGAACA---------------CCATCTCGGTGG
CCGTTGGATCAGATTTGAATGAGATGGCTAGAAGCACA-TATTACCTAGACTTGTTTTTGCAACTGAGTGGTTGTTGCGA
TTTCTCTCACCGGAACAACTGGTGTGTTGTGGGATTTGAATTTTGATCCCCTCGAGAGCAGCCACCACCCGTGCTCCTCC
AAAGCATCCCCGATGCGCCACCGGTGACACCGGCAAGCACCCCCGTCGCCTGTCGCCCACCACCAAGCA-CCCCACTGTG
CCACCGCAGATGCAGCCGAGCATGCGCTCCGCTGTCGCGGTTGTCGGCCGCCTCCACCACTATCCACCCTC--TCTCCTC
CTC-----TCTCACCTTCATCCAGACCAGGTGCTGGCAGCCACGCCCTCACCGAGCACCCCCGTTGCGCCACCGCTGACG
CCGGCGAGCACGCGCTCCGCCGTCGCGGTCGTCGGCCGCCTCCACCACCACCCACCCTCT---C----------------
-----------------------------------------------CCTCCGCTCGACACCGACAACGCAAGGCACCGT
CCACTTTTGCAACATCACTGCTGTTGC-AAAAACAAATGTGCAACAAGACCGCTGTTGCAAAAGAAAATTGCACAAAGAC
CTCTGTTACAAAAAAAAAGCCGCAACAATATCTTTGTTGCAAAAA-AAATCGCAACACAACCTCTGTTGCAAAAAAAATT
GTACAACACAACCACTGTTGCACAAAAATTCAAGCAGTCTTGGGAATCGGCAGGCCGACGGCGGCTCTTGGTCACCCACG
GATCCATGTCGTTGTGCGGACGCGGCG
>chr5B_148
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATCATTAACCTAT
AAAACTGACCGCGTAAACCGAAAGGGGTTTACCGCGAAATTCCTACCGTCCTGGGCTCCGCTTAATAATCCCCCTCGCTG
CTTGCACTGGTCAACCGAGCCACCCCAGGAGCAACACCAGCACACCACCATGGCTGCCTGCAATGCAAGAATCCGTATCT
TGCTCGTGCTATACGGCGCCTCCTACCTCGCGCCCAACGCCACCGCACTCTCCGTCAACTGCAGCGGTCCGGATCATCGC
CGCGAGGCGATCTCTCGCCATGATACGTCCCTTGCAGGTAACACCACCATAGGCATGTTCAGTGTCCTCGACTTGGGTTG
GTGCTCTAGCAGTAGCAGGGCGCTGCCTCACAGCCCCGGCGTCGCCCCAGCAGTCACAAGGCG-----------------
----TGTAATCCCGGCCACCGCTGATGTCGATTCGAGTATTGACGGCTCAATCAGAGAGAAG------GGAGAACCGTTC
AACTGCAGCAGCAGGTTTTTGTCTGGTCACCCATTCGCGTTTCAAGAACAACAATTTGCAACTTTGGCTAGAAATTACTC
TGGTGGTTCTGCTGGAAGCTTAGGATTTGGCGATGCTATACTTTGCAATAAGTCCGGTAGCGTGAATTTAACCTCGCCCA
ATCGACTCCCTCATCACTGGCTTTCCGACGAAGCTTGGGCGCGAAGATTGTTGTCCGGTACACGTGGCCAGAGAGCGACG
AGGAAACAGCAGGCTGCACCCCGCGGGAAGGTGGCATCGTCGCGGCTGAAGCATGCATCTGTCGCCGTTTCGGCTTTGGT
AGGGTTGGTTTGCGTCGTGGCAGCCCTCCTTCGCTGCTGCATACGTACGGACAGGCCGCCGCGGCGGAGCACGGCGGCCA
TCGAACTGGAGGACGACGAGCACGTCCTAACCGAACCTGGGCTCCGGCGAGGACTGGGGCCTAGGCAGTTCTGCCACAGC
GAGCTCGCCGCCGCGACCGACGATTTCGCCGACGAGAGGAGGATCGGGAGAGGGGGGGTTCGGTCCGGTGTACAGAGGCT
ACTTGAGTGACCAAGACCGTCATGTGGCCATCAAGACGCTCT------------CACAGGAGCTGT---CCGTTCAGGGG
CTCCGGGAGTTTGAGGCAGAGGTCGCCATCATGAGCCAGCTTAGGCACCGCAACATAGTCCAGCTCGTGGGCTGGTGCC-
--GTCGTCGGAGAGGAGGA---------------CTGGCGCTCGTCTACGAGCTAGTGGACGGGGGCAGCCTCGACACCC
ATCTCTACAATCCCGACAGATGCTTAACTTGGTTGGAG-------AGGTAGTTCTCCTTCCTCGTAGACC----------
AAACTTGATCTAAAAATTCAAGGCTG-------------ACACCCAAACTCTGCCCTCGCCACCATTACTGCAGGTACAA
TATCGCGCTCGGCCTGGGCTCCGCCCTGCGGTACCTCCACACGGACTGCCACCAGTGCGTCGTGCACGGCGACATCAAGC
CCGCGAACGTGATGCTCGACGCGTCAGGCAGCGCTAAGCTCGGCGACTTCGGGCTCGCGAGGCTCGTCGACCACGGAGCC
GAGCCACGGACGACGCAGGTCGTCGCGGGGACCCTCGGGTACATCGACCCAGAGTTCGTCAGCAGCCGCCGGCCGAGCGC
CGAGTCCGACGTGTACAGCTTCGGCGTCGTGCTCCTCGAGATCGCCTGTGGCAGGCGGCCCGCGTCGAGGAGAACCGG--
-CCAGGCCTCGGCGGCGCTGCTGGCCTCGGTCCGCGACTTGTACCACCGGAACCTGATCGTCGACGCGGCGGACCGGAGG
CTGGATGACGAGTTTGACAAGCTGCAGATGGAGCGTCTGCTCGTGACGGGGCTTTGGTGCGTGCACCACGACCCGTTGCA
GCGGCCGTCCGTTACGCAGGCTATGGATGTGCTACGGTCCGAAGACGGCAGGTTGCCGGTGCT---TGTAGCGAT-----
-GCCTGGTTCCGGGGAG------ATTCGATCGTTGGAGGGGCAGGCTTATGGCGATGTGTCTGACGAGAACTCTGATTAC
TTGAATGAATCAACTGAAACTGCGTACCTTA---CTA---GCGAGGAGTGAGCTTATCTTTAGTCCCGGCAGGACAAGTA
TCGATACATCCACAAATGTAGTGCTCCAGGTTAGATTGTCATTGTCACTTGCATATCCACGGTCACCTTGGTGCAGTATA
TATTGGATAAATGGTTCGCCGTTTTATTAAACATTATCCTCTACTTTTCGGTTTTTCGCGCTTAACTATTTGAGTTTTCA
ATATTTATCCTCCAATAAAGGAGGGGAAATGATTGGGATCACCCAACAGAACACGACGCATGCGTCCGCCATCTCCGTGG
CAGTTCGATCGGATTTGAATGAGATGGCTAGGAGCACA-TATCATGTAGACTTGTTTTTGCAACTGAGTGGTTGTTGCGA
TTTCTCTCACCGGAACAACTGGTGTGTTGTGGGATTTGAATCTGGATCCCCTCGAGAGCAGCCACCCCCCGTGCTCCTCC
AAAGCACCCCCGATGCGCCACCGGTGACACCGGCGAGCACCCCTGTCGCCCTTCGCCGACCACCAAGCA-CCCCGTTGTG
C-ACCACATATGTCGCCGAGCACGAGCTCCGCTGTCGCGGTTGTCGGCCGCCTAAACCACCATCCATCCTCACTCATCCT
----CTCTTCTCACCTTCATTCAGACCAGGCGCTGGCAGCCACGCCCTCACCGAGCACCCCCGTTGCGCCACCGCTGACG
CCAGCGAGCACGCACTCAGCCGTCGCGATTGTCGGCCG-CTCCACCACCACCCACCCTCT---CTCCTCCACCCTCTTCT
CTATCGACGGTACCCGCTCTTGCTGCTACCGGTGATGAAGAAGACGACCTCCGCTCGACACCGACAGCGCAAGGCACCGT
CCACTTTTGCAACATCACTGATGTTGCAAAAAACAAATGTGCAACAAGACCGATGTTACAAAAGAAAACTGCACAAAGAC
CTTTGTTACAAAA-AAAAGCCGCAACCATATCTAGGTTGCAAAAATAAATCGCAACACAACCTCTGTTGCAAAAAAA-TT
GTACAACACAACCTCTGTTGCACAAAAATTCAAGCAGTCTTGGGAATCGGCAGACCGACGGCGGCTCTTGGTCACCCACG
GATCCATGTCGTTGTGCGGACGCGGCG
>chr5B_1061
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-----------------------ATCATAACCGAACCTGAACCTCATCGAGGACCGGGGCCTAGGGAGTTCCGCTATGCC
GAGCTTGCCGCCGCGACTTGCAACTTTGCAGAGGAGAACAAGATCGGGAGA-GGGGGCTTTGGTCCGGTCTACAAAGGCT
ACCTGAGAGAACAGGACCGTCATGTGGCCATCAAGACACTCTATGTCTCAGTCTCAGAGGAGCAGC---CCTCGCAGGGT
TTCAAGGAGTTCCAGGCGGAGATAACCGTCCTGAGCCAGCTCAGGCACCACAACATTGTCCAGCTCGTCGGCTGGTGGTG
CGGTCGCCGG---AGACGGCGGAGAGGACGGCAGCTAGCGCTCGTCTACGAGCTCATGCCCGGCGGCAGCCTCGACACGC
ACCTCTACAACCCTGACAAGCAC---TTAACTTGGCCAGAGAGGTACTATCCGATTCTTTTGCACTGGATACAAACTTTA
AAATCTGATGAAGAAAAATGAGATTG-------------ACATCCACAACTT-----------------TGCAGGTACGA
GATCGCGCTGGGACTGGGCTCCGCCTTGCGGTACCTCCACACGGAGTGCGACCGGTGCATCGTGCACGGGGACATAAAGC
CCGCGAACGTGATGCTCGACGCGTCGGGCAACGCTAAGCTCGGTGACTTCGGGCTGGCGAGGCTCATCGACCATGGCGCC
GAGCCACGGACGACACAAGCCGTGGCAGGCACCGTCGGGTACATAGACCCGGAGCTCGTCAACTGCCAGAGGCCGGGCAC
GGCGTCCGACGTGTACAGCTTCGGTGTCGTGCTTCTAGAGATCGCCTGTGGCAGGCGGCCAACCTCGGG-----------
-------------GTTGCTGCTGGCGTAGGCTCGTGAAATGTACCGCCAGAGCCGGGTCCTCGACGCGGCGGACCAGAGG
CTGGGCGGCGAGTTTGACAGGCCGCAGATGGAGCGTCTGCTCGTGACGGGGCTCTGGTGCGCGCACCACGACCCGATGCA
GCGGCCGTCCGTTACCGAGGCTATAGACGTCCTGCGATTGCAAGACGCAGAGTTGCCGATGCTCGGTGGAACGAT-----
-TGGTGGTTCCGGGGAC------ATCCTCTCCTTGGAG------------------------------------------
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>chr2D_1076
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--------------------------------------GAGCTCCGGCGAGGATTAGGACCTAGGGAGTTTCGCTACCGC
GAGCTTGCCGCCGCGACAGACAATTTCGCCGAGCAGAAAAAGATCGGGAGA-GGGGGGTTCGGTCCGGTGTACTGCGGCT
ACTTGAGTGACCAAGACCGGCATGTGGCCATCAAGACGCTCT------------CGGAGGAGCCGACGGCGGTGCAGGGG
CGCAAGGAGTTTGAGGCAGAGGTCAGTGTCATGAGCCAGCTTAGGCACCGCAACATCGTCCAGCTCGTCGGCTGGTACC-
--GTCGCCGG---GGACGA---------------CTAGCGCTCGTCTACGAGCTCATGCCCGGAGGCAGCCTCGACACCC
ATCTCTACAGTCCTGACAGACGCTTATTAACGTGGCCAGAGAGGTACGTAGCTCTCCTTCTGCATCCACC----------
AACCTCTGTCCTGTACTGACTACTGA---------------------------------CCACTACCAGTGCAGATACAA
GATTGCTCTTGGCCTGGGCTCTGCCTTGCGGTACCTCCACACGGAATGCGACCAGTGCATCGTGCACGGCGACATCAAAC
CCGCAAACGTGATGCTCGACGCGTCGCGCAACGCCAAGCTCGGCGACTTCGGGCTAGCGAGGCTCGACGACCATGGAGCA
GAGCCACGGACAACGCAGGTCGTCGCGGGAACCCTGGGGTACATCGACCCGGAGTTCGTCAGCAGCGGCAGGCCGAGCGC
AGAGTCCGACGTGTACAGCTTCGGAGTCGTGCTCCTCGAGATCGCCTGCGGCAGGCGGCCGACGTTAACGCGAACGGATC
ATCAAGCCTCGACGGCGCTGCTGGCCTCGGTCCGTGGCATGTACCACCGTAACCAGATCGTCGATGCAGCAGACCGGAGG
CTGAATGGCGAGTTTGACAGGCTGCAGATGGAGCGTCTGCTGGTGACAGGGCTGTGGTGCGCGCACCACGACCCGATGCG
GCGGCCGTCCGTTGCGCAGGCCATGGATGTGCTACGATCTGCAGACGCCAAGTTGCCCGTGCT---TGCAGAGAT-----
-GCGTGGCGCTGGGGAG------GTTCGGTCTTTGGAGGCACAGGCTTACGACGATGTGCCTGCCGAGAACTCTGCTTAT
TTAA------CAACTGAAAGTGCGTCCCTTA-------------------------------------------------
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>chr2B_1094
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--------------------------------------------------------GGACCTAGGGAGTTTCGCTACCGC
GAGCTTGCCGCCGCGACACACAATTTCGCCGAACAGAAAAAGATCGGGAGA-GGGGGGTTCGGTCCGGTATACTGCGGCT
ACTTGAGTGACCAAGACCGGCATGTGGCCATCAAGACGCTCT------------CGGAGGAGCCGACGGCGGTGCAGGGG
CGCAAGGAGTTTGAAGCAGAGGTCAGTGTCATGAGCCAGCTTAGGCACCGCAACATCGTCCAGCTCGTCGGCTGGTACA-
-----GTCGCCGTGGACGA---------------CTAGCGCTTGTCTACGAGCTCATGCCCGGAGGCAGCCTCGACACCC
ATCTCTACAGTCCTGACAGACGCTTATTAACGTGGCCAGAGAGGTACGTAGCTCTCCTTCTGCATCCACC----------
AACCTCTGTCCTGTACTGACTACTGA---------------------------------CCACTACCAGTGCAGATACAA
TATTGCTCTTGGCCTGGGCTCTGCCTTGCGGTACCTCCACACCGAATGCGACCAGTGCATCGTGCACGGCGACATCAAAC
CCGCAAACGTGATGCTTGACGCGTCGCTCGACGCCAAGCTCGGCGACTTCGGGCTAGCGAGGCTCGTCGACCATGGAGCA
GAGCCACGGACAACGCAGGTCGTCGCGGGAACCCTCGGGTACATCGACCCGGAGTTCGTCAGCAGCGGCAGGCCGAGCGC
AGAGTCCGACGTGTACAGCTTCGGCGTCGTGCTCCTCGAGATCGCCTGCGGCAGGCGGCCGACGTTGACGCGAACGGATC
ATCAAGCCTCGACGGCGCTGCTGGCCTCGGTCCGTGGCATGCACCACCGGAACCAGATCGTCGATGCAGCAGACCGGAGG
CTGAATGGCGAGTTTGACAGACTGCAGATGGAGCGTCTGCTGGTGACAGGGCTGTGGTGCGCGCACCACGACCCGATGCG
GCGGCCGTCCGTTGCGCAGGCCATGGATGTGCTACGATCTGCAGACGCCAAGTTGCCCGTGCT---TGCAGAGAT-----
-GCGTGGCGCTGGGGAG------GTTCGGTCTTTGGAGGCACAGGCTTATGACGATGTGCCTGTCGAGAACTCTGCTTAT
TTAA------CAACTGAAAGTGCGTCCCTTA-------------------------------------------------
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>chr2D_1234
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-------------------------------------GCTCT------------CGCAGGAGCAGACCGCCGTGCAGGGG
CGCAAGGAGTTTGAGGCAGAGGTCACCATCATGAGCCGGCTTAGGCACCGCAACATCGTCCAGCTCGTCGGCTGGTACC-
--GTGGCCGG---AAACGA---------------CTAGCGATTGTCTACGAGCTCGTCTCCGGAGGCAGCCTTGACACCC
ATCTCTACAGCCCTGACAGACTC---TTCACGTGGCCAGAGAGGTACTTCTGCTG--TTCTGCGTCGATC----------
GATCTTAGCTGAAAGTTTTTGAGCCTGAGTTGGTAGTGTATATCCAAGCTCTATACTCGCCACTGTCACTGCAGGTACAA
GATCGCGCTCGGCCTGGGCTCCGCCTTGCGGTTCCTCCACACGGAATGCGACCAGTGCATCGTGCACGGCGACATCAAAC
CCGCAAACGTGATGCTGGACGCGTCGCGCAACGCCAAGCTCGGCGACTTCGGGCTAGCGAGGCTCGTCGACCACGGAGCC
GAGCCACGGACAACGCAGGTCGTCAAGGGAACCCTCGGGTACATCGACCCGGAGTTCGTCAGCAGCCACAGGCCGGGCGC
CGAGTCCGACGTGTACAGCTTCGGCGTCGTGCTCCTCGAGATCGCCTGCGGCAGGGGGCCGACGTTGACGCGAACGGATC
ATCAAGCCTCGGCGGCGCTGCTGGCCTCGGTCCGTGGCATGCACCACCGGAACCGGATCGTCGACGCGGCAGACCGGAGG
CTGAATGGCGAGTTTGACAGGCTGCAGATGGAGCGTCTGCTCGTCACAGGGCTGTGGTGCGCGCACCACGACCCGATGCG
GCGGCCGTCCGTTGCGCAGGCCATGGATGTGCTACGATCTGCAGACGCCAAGTTGCCCGTGCT---TTCAGAGAT-----
-GCGTGGCGCC-GGGAG------GTTCGGTCTTTGGAGGCACAGGCTTATGG----------------------------
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>chr7A_1522
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--------------------------------------------------------------------CTGCAGGTACAA
GATCGCGCTGGGGCTGGGCTCCGCGCTGCGGTACCTCCACACGGAGTGCGAGCAGTGCGTCGTGCACGGGGACAACAAGC
CTGCAAACATGATGCTCGACGCGTCGCGCAACGTCAAGCTCGGCGACTTCGGGCTGGCGAGGCTCGTCGACCACGGCGCA
GAGCCGCAGACGACGCAGGTCGTGGCAGGCACCGTCGGGTACATTGACCCGGAGTTCGTCAACGACCGCAGGCCGAGCGC
CGAGTCCGACGTGTACAGCTTCGGCGTCGTGCTCCTCGAGATCGCCTGCGGCAGGCGGCCGGCGTCGAGGGGGCCAGG--
-CCATGCCTCGGCGGCGCTGCTGGCGTCTGTCCGGGAGATGTACTGCCGGAACCAGATCCTTGACGCGGCAGACAGGAGG
CTCGACGGCGACTTCGACGGGCTGCAGATGGAGCGTCTGCTCGTGACAGGGCTTTGGTGCATGCACCACGATCCGGTGCG
GCGGCCGTCGGTGACGCAGGCTGTCGATGTGCTACGATCTGAGGACGCCAGGTTGCCGGTGCT---TGAAGCGGT-----
-GCGTGGTTCTGGGGAG------ATTCACTTCTTGGAGGGACAGGCTTATGGTGATCTACCCGCCGAGGACTCTGCTTAT
TTGCATGAATCAACTGAAACTGCGTACCTTAGTGCTA---CCGAGGACTGAGCTTATTTAT--TCCCGGCAG--------
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>chr7A_1523
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---------------------------------------------------------------------TGCAGGTACAA
GATCGCGCTGGGGCTGGGCTCCGCGCTGCGGTACCTCCACACGGAGTGCGAGCAGCGCGTCGTGCACGGGGACATCAAGC
CTGCAAACGTGATGCTCGACGCGTCGGGCGACGCCAAGCTCGGCGACTTCGGGCTGGCGAGGCTCGTCGACCACGGCGCC
GAGCCGCGGACGACGCAGGTGGTGGCGGGCACCGTCGGGTACATCGACCCGGAGCTCGTCAACGGCCGCAGGCCGAGCGC
CGAGTCCGACGTGTACAGCTTCGGCGTCGTGCTCCTGGAGATCGCCTGCGGCAGGCGGCCGACGTCGAGGGGGCCGGG--
-TCAGGCCTCGGCGGCGCTGCTGGCGTCGGTGCGGGAGATGTACCGCCGGAACCAGATCCTTGACGCGGCAGACAGGAGG
CTGGGCGGCGGGTTCGACAGGCCGCAGATGGAGCGTCTGCTCGTGACGGGGCTTTGGTGCGCGCACCACGATCCGATGCA
GCGGCCGTCGGTGACGCAGGCTGTCGATGTGCTACGATCTGAGGACGCGAAGCTGCCGGTGCT---TGAAGCGGT-----
-GCGCGGTTCTGGGGAGGGCGAGATTCACTCCTTGGAGGGACATGCTTATGGTGATCTGCCCGCCGAGGACTCTTCTCGT
TTGCA---------TGAAACTGCGTACCCTA---CTTCTTCCGAGGACTGAGCTTATCTAT--TCCCGGCAG--------
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>chr2D_2441
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--------------------------------------------------------------------CCATCTCCGTGG
TTGTTGGGTCAGATTTTAGTGTGATAGCTAGAAGCAACGTATTACCTAGACTAGTTTTTGTAACTGAGTGTTTGTTGCGA
TTTCTCCCACCGCAAAAATAGGTGTGTTGCAGGATGTGAATCTGGATCCCCTAGAGAGCAGCCACCACCCATGCTCCTCC
AGAGCACCCCCGATGCACCACTGCTGACGCCGACGAGCACCCCCGTCGCG------CCACCGCCAAGCACCCCCGATGTG
CCACCGCTGACGCC-GCGAGCACGCGCTCCGCCGTCGTGGTTGTCGGCCGCCTCCACCACCATCCACCCTT--TCTCCTC
CTCCCTCTTCTCACCTTCATCCAGACCAACCGCTGGCAACCACACCGCCGGCGAGCACCCCCGTTGCGCTACCGCTGACG
CCGGCGAGCACGCGCTCCGCTGTCGCGGTTGTCGGCCGCCTCCACCACCATCAACCCTCT---CTCCTCCTCCCTCTTCT
CTCCTTCATCCAGTCGCGCCTCCGCGAGCATCCCCACTGCACCGTCGCTGACGCCGGCGAGCACGCGCTCCGCCCCAATG
ATCGTCGGCCGCC-TCCACCACCACCCACCCTCTCTCCTCC---------------------------------------
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>chr3A_2455
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--GTTGTATCAGATTTTAATGAGATGGCTAGAAGTAACGTATTACCTGACTAG--TTTTGCAACTGAGTGGTTGTTGCGA
TTTCTTCCACCGCAAAAATTGGTGTGTTGCGGGATTTGAATTTATATCCCCTCGAAAACAACCACCACCCATGCTCCTCC
AAAGCAACCTCGATACGCCACCGCTGACGCTGGCGAGCACCCGCGTCGCG------CCACCGCGAAGCAGCCTCGCTGTG
CCACTACTGACGTCGGCGAGCACGTGCTCCCCCATCGCGGTTGTCGGCCGCCTCCACCACCATCCACTCTCTCTCTCCTC
CTCCCTCTTCTCACCTTCATCCAGACCAGGCGCTGCCAGCCGCGCCACCGCCGGGCACTCCCGCTGCACCCGCACTGACG
CCGGCGAGCACGCGCTCCGCCATCGCGGTCATCAGTCGCCTCCACCACCACTAACCCTCTCTCCTCCTCCTCCCTCTTCT
CTCCTTCATCCAGTCGCGCCGTGGCAAGCACCCCCGATGCGCCGCCGCTGACACCGGCTAGCACGTGCTCCGCCGTCGCG
GTCGTCGGCCGCCTTCCACCACCACCCACCCTCTCTCCTCC---------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----SS----
------------------S---------------------------------------------S---S-S---------
--------------------------------------------------------S------S----------------
-------S---------------------------------S-------------------------S------------
----------------------------------------------------------------------SS--------
----------------------------S---S----SS-----S---------S--SSSS--SSSSSSSSSSSSSSSSS
SSSS---------SS-----S-------S-----S---S--------S-SS-S-SS-S---SSSSSSS-------SS--S
---------S--------------S---S--SS--------SS-----------S--------S----S-----------
------------------S--S---S--SSSS-SSS--S-SS--S--SSS-S-S--SSSS-SS----------S----SS
-S-SS-SSSSS-SSSSSS-S--SS-S---------SS--------------------------S-----S----------
--------------S---S-S-S---------S--------------------S---S-------------------S--
S-------------S------------S--S-----------S----S-S---------------S----S-S---S---
----------S-------------------------S-------S---S---SS------------S-------------
--------------S--S--------------------------S-------------------S-------S--S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S--S-----------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S--S-------------------------------S-------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
-----------------------S-------------------------------------S-----------------S
-------------------------------------------------------------------------S------
---------------------------------------------------------------------------SSSSS
S------------------------------------------------------------------S-------S----
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-S------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
------S---------------------------S---------------SS----------------------S-----
-------------S--------S-------------------------------------S-------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------S-------------------------------S----S----------S-----------
--S----------S------------S------SS------------------------------------------S--
-------------S---------------------------------------S--------------------------
---------------------------
>forward_581
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GCATGTAATCCCCACCACCA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_2556
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GGTGG
CCGTTGGATCAGATT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
