>input_sequence_57678
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---------------------ATGGCGGCCAAGATCTACATTGTGTGAGCACACCTCAACCCCACTCTGCCTTCCTTCCT
CTCGGTCGCACCCTTTATTTGCTGCGGCAACTTTCTTGTTCGACCATCCTGGCCACCAATTTGCGGCGCGGCGAGATTAT
GGTTCTTATGTCTTTTTGATTACGCACTTGGGCGATTTACTTTCTTG----GGT-GAATCCCTGACGCAGTGACACTGCA
TTTGGAAGTGTACATCGGAGTTGGTTAGTTCGACTTGGAGAGCTCTGTTGCTCCGTTGTTCTGTTCCCCAGGGGTTCAGG
CTTTCGAAACCAAATCATAGGGGAAACACCCAGAGTTGCTC-ACTACTCAGTGACTGTTTGCGC----------------
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---------------------------------------------------------------------------AAGAT
GTTCATTCATGAACTTGCACATTCTTTAGGTACTACTCCACCTATGGCCATGTGGCCAAGCTAGCAGATGAGATTCAGAA
GGGCGTATCTTCCGTCCAAGGCGTGGACGTCAAGCTATGGCAGGTGATCACACAACGTTATATCT------ATACCGACT
AAGATATAGTACTACTAGTATATTGAGATGATCTACCGCTATGTATAGTTTTCGGATTGCCGAATAATTTTTT-CCTGCC
TGCTGATACAAACCCCATCCCAAACTCTGAATATGCTACAGGTCCCGGAGACTCTTTCTGACGAAGCGCTTGCAAAGATG
GGCGCTCCACCGAAGAGGGATGACGTGCCGGTCATCTCGCCCGCAGAGCTCGCCGACGCTGATGGCCTCATCTTCGGGTT
CCCCACTAGATTCGGCATGATGCCCACGCAGTTCAAGGCGTTCATGGACGGCACCAGTGAGCTGTGGTGCCCGCAGCGGC
TCGCCGGCAAGCCCGCCGCGTTGTTCTTCTCCTCCGGTTGCCAGGGCGGTGGCCAAGAAACCACCGCGTAAGATCCCTTC
TTCCTTCGTTGATTTGTCATGGAAATTATCTAG----------------TTAGTTTGTTGCTGATCTTGTAGGTTGACGG
CCATTACTCAGCTGGTGCACCATGGCATGCTCTTTGTTCCGGTCGGGTACACGTTTGGCGCAGGCATGTTTGAGATGGGG
CAGGTGAAGGGTGGCAGCCCGTATGGGTGTGGCACCATTGCTGGGGATGGATCACGAGTTCCCACTGAGCTTGAGCTGCA
ACAGGCCTTCCACCAAGGGAAATACTTTGCGGGGATCGCGAAGAAGCTCAAGGGTTCTCCATGA----------------
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>chr7D_1_TraesCS7D01G303800
TGGAAGCTTAAAACTTCTGGCATTTTTCTGCCAAATCTATGTGTTCAGACTTTGTCAATTATATCCAACCTTTTAACTGT
AAATTTATTTGGGAACTTAAAGTCCCTCAGAAGCTCA--------AATTTTTCATTTGACATTTATATAGG--AGGGTGA
TCCTAACCGAAGACAACCTCAAAATGTGTAGATGGCAAGGTTGCGCAAAATATTATTTGGGAAAAATGAGGAATCAATTC
AACACATCTCCCTAGATTGTTCTCTTGCTAAGATTTTGTGGTCTTATACCAAAGCCCCC-----------CACCCCACCC
CACCCTAGTATTTATGGATTTGTTCGGTAACTGATCAGTTGGTGGTTTGCTTTGGGCTATATGAAACTGTCACAATGACT
ATATCTCTAATATGATGGATTTTGCGATTTTTTGCAACTCGTCTACAAGATAATGTATTGAATCTATATGTGGTCCTTTT
TGCGTCGGGAGAAGGACGTGACATCCACGGTCTCTAGGTGCAACCTAAGGTCGTTCGGGATTTTATTGAACCGATATGGG
TGACAAACTAATAACAAGCTATGTGATACATAAGCCTGTTTTCAGTTGGTTGTAAAGCAAATTTGGTTCACCATTATAGT
GTTTTTTTATCATACTTGAAATGCTTGAAAATTTTGCAATAATTAATTAAGAGTTGTGTACGTCAATCGATGTAAAGAAC
AAGGGTGTTTACTCAATCAAAAGAAAAAGGAAAATGAGTAGCGTGAATGAAGTGTATTATTTGCTACTCGCAAAAAAAAG
AG------------------------------------------------------------------------------
--------------------------------GTGTAAAAAAATGCACGTGCACTGCACGTATCTGGGTCGGGGGCACGC
GCAGGTAGCGCGCTGGTCCTCGTCTTGGCCATTCGCGCTCACGTGAACAAGAGCTCTCCCTCCCATAAACACGGCGA-CC
GAGAGCCAAGCCGCATCTCGCTCATTCCTGCT--------CCATCTTCTTCAACTAGCTAATCCAAGATCTCCAAGAACT
CC-AAGTATCCAAGCTGACCAATGGCGGCCAAGATCTACATTGTGTGAGCACACCTCAACCCCACTCTGCCTTCCTTCCT
CTCGGTCGCACCCTTTATTTGCTGCGGCAACTTTCTTGTTCGACCATCCTGGCCACCAATTTGCGGCGCGGCGAGATTAT
GGTTCTTATGTCTTTTTGATTACGCACTTGGGCGATTTACTTTCTTG----GGT-GAATCCCTGACGCAGTGACACTGCA
TTTGGAAGTGTACATCGGAGTTGGTTAGTTCGACTTGGAGAGCTCTGTTGCTCCGTTGTTCTGTTCCCCAGGGGTTCAGG
CTTTCGAAACCAAATCATAGGGGAAACACCCAGAGTTGCTC-ACTACTCAGTGACTGTTTGCGC----------------
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---------------------------------------------------------------------------AAGAT
GTTCATTCATGAACTTGCACATTCTTTAGGTACTACTCCACCTATGGCCATGTGGCCAAGCTAGCAGATGAGATTCAGAA
GGGCGTATCTTCCGTCCAAGGCGTGGACGTCAAGCTATGGCAGGTGATCACACAACGTTATATCT------ATACCGACT
AAGATATAGTACTACTAGTATATTGAGATGATCTACCGCTATGTATAGTTTTCGGATTGCCGAATAATTTTTT-CCTGCC
TGCTGATACAAACCCCATCCCAAACTCTGAATATGCTACAGGTCCCGGAGACTCTTTCTGACGAAGCGCTTGCAAAGATG
GGCGCTCCACCGAAGAGGGATGACGTGCCGGTCATCTCGCCCGCAGAGCTCGCCGACGCTGATGGCCTCATCTTCGGGTT
CCCCACTAGATTCGGCATGATGCCCACGCAGTTCAAGGCGTTCATGGACGGCACCAGTGAGCTGTGGTGCCCGCAGCGGC
TCGCCGGCAAGCCCGCCGCGTTGTTCTTCTCCTCCGGTTGCCAGGGCGGTGGCCAAGAAACCACCGCGTAAGATCCCTTC
TTCCTTCGTTGATTTGTCATGGAAATTATCTAG----------------TTAGTTTGTTGCTGATCTTGTAGGTTGACGG
CCATTACTCAGCTGGTGCACCATGGCATGCTCTTTGTTCCGGTCGGGTACACGTTTGGCGCAGGCATGTTTGAGATGGGG
CAGGTGAAGGGTGGCAGCCCGTATGGGTGTGGCACCATTGCTGGGGATGGATCACGAGTTCCCACTGAGCTTGAGCTGCA
ACAGGCCTTCCACCAAGGGAAATACTTTGCGGGGATCGCGAAGAAGCTCAAGGGTTCTCCATGATCGGCGGCCACCAAGA
TTGTGTCGACATGAATAAAGTTGAGTTTAGCTCTGAATCTGGTAATTTCATCGGTTCACTGATTGTAAAATGCCTAGTCC
TTAACTAGGTTACAATTGTTTCTGTGGCGACCTTAGGTTAACTGTGCGGACCAAGTACTTGAGGTTGAAAACTGTTGCTG
TTATAACATGTGCTGTCATGTCATGCACATTTCTATGATCAAGGCAGAAAATCGGAAAAGAGATCCTAATG-AAACTCAG
CCGTTTTCTATGAAATTCGTGCGGCCAAAAATACCCTTAATCACTTAACGTGTCCGCAGTAAAGCAATACTTTGAGGTTG
CTTTTTTTTCAAGAAACT----T--TATTCATCTTCAATCATGGCAGTACAAAGAACAGCAAAGGTAATAAAAACTACAA
CCATGTC--------------CGACGACTACAAGCACTTTAGCGAGCCGAAGGCACGC--CGC---CGTCATCGTCCCTC
CCTCAC------CGGAGCCGAGCAA---ACCTTGTTA-AGTAGACAATCGGAAAGTCGTCGTGCTAAGGCCCTATAGGAC
CAGCGCACCAGAGTAGTAACCACCGCGGATGA-AGAAAGTCGTATATCAGAAGGATCAAACCTGTAAACTCC--------
--CA----------AAC----------GAAGA----------C-----CGGATCCAAATAGATCTACCGAATACCAG---
CACCGACCGA-TCCTGCGAGATCTGAAGGAGAC--ACCTTCACACGCCCTCTGACGATGCTAGACGCACCATCGGGATGA
GAATAGAACGTGGGAGACATTATTCCTACTAAGGGACATCATCGCCGCCACACAGTCCCAACCAAGACGTTGAACCTAAC
AAGAATGAGAACGGGGCCCCTTCCGCCGGCAGGAGTCGAG---------------AACCTCTGCACCTCCATGGCCT---
--AGAGGCCATGGGAGATGGGGCGGACCGGCGGCGGCGCCGATGCGAGGAGAAGA-GCTTTTCTTTTAAAGAATATACTT
TCAGGTTGCTTGGACAAACTATTCAACAGTTTTTTTAGTTGAACTGTTCAACA
>chr7A_1
TGGAAGCTTAAAACTTCTGGCATTTTTCTGCCAAATCTATGTGTTCAGACTTTGTCAATTATATCCAGCATTTTAACTAT
AAATTTATTTGGGAACTTAAAGTCCCTCAAAAGCTCAAATATTTCAT--------TTGACATTTATATAGGATAGGGTGA
TCCTAACCGAAGACAACCTCAAAATGTGTAGATGGCAAGGTTGCGCAAAATATTGTTTGGGAAAAATAAGGAATCAATTC
AACACATCTCCCTAGATTGTTCTCT-GCTAAGATTTTATGGTCTTATATCAAAGCCCCCCTACCC-----CACCTCACCC
CACCCTAGTATTTATGAATTTGTTCGGTAATTGATCAGTCGGTGCTTTGCTTTGGGCTATATGAAACTGTCACAATGACT
ATATCTCTAATATGGTGGATTTTATGAGTTTTTGCAACTCATCTACAAGATAATTTATTGGATCTATATGTGGTCCTTTT
TGCGTCGGGAGAAGGACGTGATTTCCACGGTCTCTAGGTGCAACCTAAGGTCGTTCGGGATTTTATTGAACCAATATGGG
TGACAAACTAATAACAAGCTATGTGATACATAAGACTGTTTTCAGTTGGTTGTAAAACAAATTTGGTTCACCATTATAGT
GTTTTTT-ATCATGCTTGAAATGCTTGAAAATTTTGCAATAATTAATTAAGAGTTGCGTACGTCAATCGATGTAAAGAAC
GAGGGTGTTTACTCAATCAAAAGAAAAAGGAAAAGGAGTAGCGTGAATGAAGTGTATTATTTGCTACTCGCAAAAAAAAT
GAAATGTAG-----------------------------------------------------------------------
-------------------------------------AAAAAATGCACGTGCACTGCACGTATCTGGGTCGGGGGCACGC
GCAGGCAGCGCGTTGGTCCTCGTCTTGGCCATTCGCGCTCACGTGAAGAGGAGCTCTCCCTCCCATAAACACGGCGACCC
GAGAGCCAGGCCGCATCTCGCTCATTCCTGAAATCCTGCCCCATCTTCTTCAACTAGCTAATCCAAGATCTCCAAGAACT
-C-AAGTATCCAAGCTGACCAATGGCGCCCAAGATCTACATTGTGTGAGCACACCTCAACCCCACTCTGCCTTCCGTCCT
CTCGGTCTCACCCTTTATTTGCTCCGGCAACTTTCTTGCCTGACCATCCTGGCCACCAATTTGCGGTGCGGCAAGATTAT
GGC--------CTTTTTGATTAATCACTTGGGCGATTTACTTTCTTG----GGGGGAATCCCTGAGTTGGTCATAGACTC
A------------------------TAGTTC------GAGAGCTCTGTTGCTCCGTTGTTCTGTTCCCCTGGGTTCCAGA
CTTTGGAAACCAAATCATAGGGAAAACAGCCAGCGTTGATC-ACTGCCCAGTGACTGTTCGCGCGTAACAGTGGCAGAGA
AAAAAGCATGCTGATATGGAGACGAGCTGTGCCAGTTCAGACCAGGACACCAACGGAAGTTGCTCACTGCTCAGCATCTG
GTTCAAGCAGAGATCGTTATAAAAAGCAGATACCGTTGTAAAACTTGGCCTTGCAACAGCCACATTACATTAACCGTTGA
AAACATTGATCTACTTCTCAGTTTTGTGGAGTTTTTTGTACTGTGTACCAAAAACGAAAGCAAATGTCATCCTACAAGAT
CTTCATTCATGAGCTTGCACATTCTTTAGGTACTATTCCACCTATGGCCATGTGGCCAAGCTAGCGGATGAGATTCTGAA
GGGTGTGTCTTCCGTCCAAGGTGTGGAGGTCAAGCTATGGCAGGTGATCACACAACGTTATATCT------ACACCGACT
AAGATATAG---TACTAGTATATTGAGATGATCTACCGCTATATATAGTTTTCGGATTGCCGAATGATCTTTT--CTGCC
TGCTGATACAAACCCCATCCCAAACTCTGAATACACTACAGGTCCCGGAGACTCTTTCCGACGAAGCACTCGCAAAGATG
GGCGCTCCTGCCAAGAGGGATGACGTGCCGGTCATCTCGCCCGCAGAGCTCGACGACGCCGACGGCCTCATCTTCGGGTT
CCCCACTAGATTCGGCATGATGCCCACGCAGTTCAAGGCGTTCATGGACGGCACCAGTGAGCTGTGGTGCCCGCAGCGGC
TCGCCGGCAAGCCTGCCGCATTGTTCTTCTCCTCCGGTTGCCAGGGCGGCGGCCAAGAAACCACCGCGTAAGATTCCTTC
CTCCTTGGTCGATTTGTCATGGAAATTATATAGTGGAAGTACATGCTAATTAGTCTGTTGCTGATCTTGTAGGTTGACGG
CCATTACTCAGCTGGTGCACCATGGCATGCTCTTTGTTCCGGTCGGGTACACGTTTGGCGCAGGCATGTTTGAGATGGGG
CAGGTGAAGGGTGGCAGCCCGTATGGGTCTGGCACCATTGCTGGGGATGGATCACGAGTTCCCACTGAGCTTGAGCTGCA
ACAGGCTTTCCACCAAGGGAAATACTTTGCGGGGATCGCAAAGAAGCTCAAGGGTTCTCCATGATCGACGGCTACCAAGA
TCGTGTCGACATGAATAAAGTTGAGTTTAGCTCTGAATCTAGTAATTTCATCGGTTCATTGATTGTAAAATACCTAGTCC
T-------------------------------------------------------------------------------
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>chr7B_75
--------------------------------------------------------------------------AACTAT
AAATTTATTTGGGAACTTAAAGTCCCTTAGAAGCTCA--------AA--------TTTATATTTATAGAGG--AGGGTGA
TCCTAACCGAAGACAACCTCAAAAAGTGTAGATAGCAAGGTTGCCCAAAATATTGTTTTAGGGAAATGAGAAATCGATTC
AACACATATCCCTAGATTGTTCTCTTTCTAAGATTTTGTGGTGTTATACCAAAGTCCCCCCACCCCACCCCACCCCACTC
CACCCTAGTATTTATGAATTTGTTCGGTAACTAGTGAGTTGGTGCTTTGCTTTGGGCT-TATGAAACTGTCGCAATGATA
ATATCTCTAATATGAGGAATTTTACATTTTTTTAGAGGTCACCTACAAGGTAATTTATTGGATCCCTATGTGGTCTTTTT
TGCGTCGGGAGAAGGACGCGACATCCACGGACTCTAGGTGCAACCTAAGGTTGTTGGGGATTTTATTCAACCGATATGGG
TGACAAACTAATAACATGATATGTGAAG-ATAAGCCTGTTTTCCGTTGGTTGTAAAACCAATTTGGTTCACCATTATAGT
TGTTTTTAATCGTACTTGGAATGCTTGAAAATTTTGCAATAATTAATTAAGAGTTGTGTACGTCAA----------GAAC
GAGGGTGTTTTTACCCAATC----AAAAAGAAAAAAAGTAGCGTGAATGAAGGGCCTGTTCGGAGTCTCGCCGCTCCGCA
CGACTCCGCTCCCGGAGCGGCCCGAGCTTCAGTTGAAAATACGGAGTGGAGAAAAAGATGCTTCGTAGATTCTTGTATTT
CTTGGAGCGGTGGATTGACGAACAGGCCTGAAGTGTAGAAAAATGCACGTGCACTGCACGTATCTGGGTCGGGGGCACGC
GCAGGTAGCGCGCTGGTCCTCGTCTTGGCCATTCGCGCTCACGTGAAGAAGAGCTCTCCCTCCCATAAACACGGCCA-CC
GAGAGCCAGGCCGCATCTCGCTCATTCCTGCAATCCTACTGCATCTTCTTCAACTAGCTAATCCAAGATCTCCAAGAACT
-CCAAGTATCCAAGCTGACCAATGGCGGCCAAGATCTACATTGTGTGAGCACACCTCAACCCCATTCTGCCTTCCTTCCT
CTCAGTCTCACCCTTTATTTGCTCCGGCAACTTTCTTGTTCGACCATCCTCGCCACCAATTTGCGGCGCGGCGAGATTAT
GGC--------CTTTTTGATTACTCACTTGGCTGATTTACAGTACTTTCTTGGGGGAATCCCTGACG--------CTGCA
TTTAGGAGTGTACATCGGAGTTGGTTAGTTC------GAGCGCTCAGTTGCTCCGTTACTCTGTTCCCCTGGGGTTCAGA
CTTTCGAAACCAAATCATAGGGAAAGCAGCCAGCATTGCTCAACTGCTCAGTGATTGTTTGCGC--AATAGTGGCAGAGA
AAAAAACATCCTGAGATGGAGACGAGCTGTGTCAGTTCAGGCCAGGACACCAACGGAAGTTGCTCACTGCTCAGCGTGTG
GTTCAAGCAGAGATCGTTGC-------------------AAAACTTGGCTTTTCAACAGCCACATTACATTAACCGTTGA
AATCATTGATCTACTTCCCAATTCTGTGGAGTATTATCTATTGTGTACCAAAAACAAAAGCAAATCCAATCCTACAAGAT
CTTCATTCATGAACTTACACATTCTTTAGGTACTACTCCACCTATGGCCATGTGGCCAAGCTAGCAGATGAGATTCTGAA
GGGCGTGTCGTCCGTCGAAGGTGTCGAGGTCAAGCTATGGCAGGTGATTACACAACGTTCTATCTGCATATATACCGATT
AAGATA------------TATACTGAGATGAACTACCGCTATATA--GTTTTCAAATTGCCGAATGATTTTTTTCCCGCC
TGTTGATACAAACACCATCCGATACTCTGAATATACTGCAGGTCCCGGAGACTCTTTCTGACGAAGCACTCGCAAAGATG
GGCGCTCCTGCGAAGAGGGATGACGTGCCGGTCATCTCGCCCGCAGAGCTCGCCGACGCCGACGGCCTCATCTTCGGGTT
CCCCACTAGATTCGGCATGATGCCCACGCAGTTCAAGGCGTTCATGGACGGCACCAGTGAGCTGTGGTGCCTGCAGCGGC
TCGCCGGCAAGCCTGCCGCATTGTTCTTCTCCTCCGGTTGCCAGGGCGGTGGCCAAGAAACCACCGCGTAAGATTCCTTC
TTCCTTTGTTGATTTGTCATGGAAATTAGATTAT-----------CTAATTAGTTTGTTGCTGATCTTGTAGGTTGACGG
CCATTACTCAGCTGGTGCACCATGGCATGCTCTTTGTTCCGGTCGGGTACACGTTTGGCGCAGGCATGTTTGAGATGGGG
CAGGTGAAGGGTGGCAGCCCGTATGGGTTTGGCACCATTGCTGGGGATGGATCACGAGTTCCCACTGAGCTTGAGCTGCA
ACAGGCCTTCCACCAAGGGAAATACTTTGCGGGGATCGCAAAGAAGCTCAAGGGTTCTCCATGATCCACGGCCACCAAGA
TCGTGTCGACATGAATAAAGTTGAGTTTAGCTCTGAATCTGGTAATTTCATCGGTTCACTGATTGTAAAATGCCTAGTCC
TTAACTAGGTTACAATTGTTTCTGTGGCGACCTTAGGTTAATTGTGCGGACCAAGTACTTGAGGTTGAATGTTACTGTTA
CTATAACATTTGCTGTCAAGTCATGCACATTTCTGTGATCAGGGCAGAAAATCGGAAAAGAGATCCTAACGAAAACTCAG
CTGTTTTCTGTGAAACTCGTGCGGACCAAAGATATCCTTAAT--------------------------------------
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>chr4A_2539
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CTTTTTTTTCAAGAAACTTTCAATCTATTTATCTTCAATCATGGCAGTACAAAGAACAACAGAGGTAATCAAAATTACAA
CCATGTCCGTGGACCACCTAGCGATGACTACAAGCACCGAAGCGAGCCGAAGGCGCGC--CGC---CATCATCGCCCTTC
CATCAC------CGGAGCTGGGCAA---ACCTTGTTGTAGTAGACAGTCCGGAAGTCGTCATGCTAAGGCCACATAGGAC
CAGCGCACCAGAGTAGCAACCATCGCCGATAA-AGAAAGTCGTAGATCAGAAGGGTCAAACCTGTAAACACC--------
--CA----------AAC----------GAAGA----------C-----CGGATCCAAACAGATCCACCGAAGACCAG---
CACCGACCAAATGCGGCGAGATCCGACGGAGACAAACCTCCGCACGCCCTCCAACGATGCTAGACGCACCATTGGGACGA
GGATAGAACGTGGGAGACATTATTCCTACTAAGGGACATCGCCGCCGCCACACAGCCTCAACCAAGACGTTGAATCTAAC
AAGAACAAGAACGGGGTCCCTCCGCCGACAGGGGGCCGAG---------------ATCCTCTGCACCTCCATGGCCA---
--AGAGGCCATCGGAGATGGGGCGGACCAGCGGCGGCGTCGACGGGAGGAGAAGA-ACTTTTCTTGTAGAG---------
-----------------------------------------------------
>chr5B_2539
CTTTTT--------------------------------------------------------------------------
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-----TTTGCGAGAAACTTCCAT--TATTCATCTTCAATCATGGCAGTACAAAGAACAACATCGATAATAAAAACTACAA
CCATGTCCGTGGACCACCTAGCGACGACTACAAGCACTGGAGCGAGCCGAAGGCGCAC--CGC---CGTCACCACCC---
---CTCCCTCATCGGAGCCGGACAA---ACCTTGTTGTAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCTCATAGGAC
CAGCGCACCAAAGTAGCAACCATCACCGACGA-AGAAACTCATAGATCAGAAATGTCAAACCTGTAAACAACCAAACGAA
GACA----------AAC----------AAAGA----------C-----CGGATCCAAACAGATCCACCGAAGACCAG---
CATCGACCGAATCCAGCGAGATCCGGCGGAGACAAACCTCCACACGTCCTCCTCCGGCGCTAGACATACCATCGGGATGG
GGATAGAACGTGGGAGTCATTATTCCTACTAAGGGACATCGCCGCCACCATACAGCCCTAACCAAGACGCTGGAACTAAC
AAGAACTAGAACGGGGTCCCTCCCGCCGGCG--------G---------------ATCCTCTGCACCTCCATGGCCT---
--AGAGGCCATCGGAGATGAGGCGGACCGACGGCAGCGCCGAAGGGAGGAGAAGA-GCTTTTCTTGTAGAG---------
-----------------------------------------------------
>chr7A_2540
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-TTTTTTTTCAAGAAACTTTCAATCTATTTATCTTCAATCATGGCAGTACAAAGAACAACAGAGGTAATAAAAATTACAA
TCATGTCCGTGGACCACCTAGCGACAACTACAAGCACTGGAACGAGCCGAAGGCGCGC--CGC---CGTCATCGCCC---
---CAC------CAGAGCCGGGCCA---ACCTTGTTGTAGTAGACAGTCGGGAAGTCGTCGTGCTAAGACCCCATAGGAC
TAGCGCACCAGAGTAGCAACCATCGCTGATGA-AGAAACTCGTGGATCAGAAGGATCAAACCTGTAAACACC--------
--GA----------AAC----------GAAGA----------C-----TGGATCCAAATAGATTCACCGAAGACTAG---
CACCGATCAAATCCCACAAGGTCCGACGGAGACAAACCTCCACACGTACTCCGATGATGCAAGACGCACCATCGGAATGG
AGATAAAACGTGGAAGACATTATTCGTAACAAGGGACATCGCCGCCGCCACACAACCTCAACCAAGACGTCAAATCTAAC
AAGAACAAGAACGGGGTCCCTCCCGCCGGCG--------GTGGG-C------GAGATCCTCCGCACCTCCATGGCCT---
--AGAGGCCATCGGAGTTAGGACGGACCGATGGCAGCGCCGGCGGATGGAGAAGA-GCTTTTCTT---------------
-----------------------------------------------------
>chr6A_2540
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-TTTTTTTTCAAGAAACTTCCAATCTATTCATCTTCAATCATGGCAGTACAAAGAACAACAAAGGTAATAAAAATTATAA
CCATGTCCGTGGACCACCTAGCGACGACTACAAGCACTGGAGCGAGCCGAAGGCGCGT--CGC---TGTCATCGCCC---
---TTCCATCACCGGAGCCGGGCAA---ACCTTGTTGTAGTAGACAGTCGGGAAGTCATCGTGTTAAGACCACATATGAC
CAGCGCACCAGAGCAGCAACCATCGCCGATGA-AGAAAGTCGTAGATCAGAAGGGTCAAACCTGTAAACACC--------
--CA----------AACAAAGACGAATGAAAA----------T-----CGGATCCAAACAGATCCACCGAAGACTAG---
CACCGCCCGAATCCCGCGAGATCCGACGGAGACAAACCTCCACACGCCCTCAGACGATGCTAGACACACCATCGGGATGA
GAATAGAACGTGGGAGATATTATTCCTACCAAGGGACGTCGCCGCCATCACACAACTCCAACCAAGACGTTGAATCTAAC
AAGAACAAGAAGGGGGTCCCTCCCGCCGGCA--------GGGGGCC------GAGATACTCCACACCTCCA--GCCT---
--AGAGGCCATCGGAGATGGGGCGGACCGGCTGCGGCGCCGACGGGAGGAGAAGA-ACTTTTCTT---------------
-----------------------------------------------------
>chr7D_2558
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-------------------------TATTCATCTTCAATTATGGCAGTAAAAAGAACAACAAAGATAATAAAAATTACAA
CCATGTTCGTGGACCACTTAGCGACGGCTACAAACACTGGAGCGAGCCGAAGGCGCGC--CGC---CGTCATCGCCC---
---CTCCCTCATCGGAGTCGGGCAA---ACATTGTTGTAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCTCATAGGAC
CAGTGCACCAGAGTAGCGACCATCACCGATGA-AGAAAGTCATAGATCAAAAAAACCAAACATGTAAACACC--------
--TA----------AAC----------GAAGA----------CAAATACGGATCCAATTAGATCCACCCAAGACCAA---
CATCGACCAAATCCCGCAAGATCCGACAGAGACAAACCTCCACACGCCATCCGACGATGCTAGACGCACCATCGGGATGA
GGATAGAACGTGGGAGACATTATTCCTACTAAGGGACGTCGCCGCCGCCACACAGCCTCAACCAAGACGCTGACTCTAAC
AAGAACAAGAACAGGGTCCCTCCCGCCGGCG--------GGGG-CC------GAGATCCTGCGCACCTCCATGGCCT---
--AGAGGCCATCGGAGATGGGACGGACCGGCGGCGGCACCGACAGGAGGACAAGA-GCTTTTCTT---------------
-----------------------------------------------------
>chr7A_2558
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-------------------------TATTCATCTTCAATCATGGCAGTACAAAGAACAGCAAAGGTAATAAAAATTACAA
TCATGTCCGTGGACCACCTAGCGGCTACTACAAGCACTGGAGCGAGCCTAAGGCACGC--CGC---CGTCATCACCC---
---CTTTCTCATGGGAGCCGGACAA---ACCTTGTTGTAGTAGACAGTCGGGAAGTCGCCGTGCTAAGTCCCCATGAAAA
CAGCGCACCAGAGTAGCAATCATCGCCGAT--GA-AAAGTCGTAAATCAGAAGGATCAAACCTGTAAACACC--------
--TA----------AAC----------GAAGATGAACGAAGAT-----CGGATCCAAATAGATCCACAAAAGACTAG---
CATCGACCGAATCCCGCAAGATCCGACGGAGACAAACCTCCACACGTCCTCCGACGATGCTAGACGCACCATTGGGAAGG
GGATAGAATGTGGGAGACATTATTACTACTAAGGGACATCACCGCCGCCACACAGCCCCAACCAAGACGCTGACTCTAAC
AAGAACGAGAACGGGGTCCCT-----------------------------------------------------------
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>chr7B_2558
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-------------------------TATTCATCTTCAATCATGACAGTACAAAGAACAACAGAGGTAATAAAAATTACTA
CCATGTCCGTGAACCACTTAGCGACGACTACAAACACTGAAGCGAGCCGAAGGCACGC--CGC---CGTCATCGGCC---
---CTCCCTCACCGGAGCCAGGCAA---ACCTTGTTGTAGTAGACAGTTGGGAAGTCGTCGTCCTAAGGCACCATAGGAC
CAGCGCAACAGAGTAGCAACCATCGCCGATGA-AGAAAGTCGTAGATCAGAAGGATCCAAACTGTAAACACC--------
--TA----------AAC----------GGAGA----------C-----CTGATCGAAATAGATCCACCGAAGATCAA---
AACCGACCGAATCCCGCAAGATCCAACGAAGACAAACCTCCATATGCTCTCCGACGATGCTAGACGCATCATC-GGACGA
GGATAGAACGTGGGAGACATCATTCCTACTAACGAACATCGCCGCCGCAACACAACGTCAATCAAGATGCTGACT---AC
AAATACGAGAACGGGGTCCCTCCCGCCGACG--------CGGGGAGGGGGGAGAGATCCTCCGCACCTCCATGGCCTTGC
CTAAAGGCCATCGGAGATGGGACGGACCGGCGGGGACGCCGACGGGAGGAGTAGA-GCTTTTCTT---------------
-----------------------------------------------------
>chr5D_2558
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-------------------------TATTCATTTTCAATCATGGCAGTACAAAGAATAACAAAGGTAATAAAAATTACAA
CCATGTCCGTGGACCACCTGGCGACGACTACAAGCACTGAAGCGAGCCGAAGGCGCGC--CGC---CACAATCGCCC---
---CTCCCTCACCGGAGCCGGACAA---ACCTTGTTGTAATACACAGTTGGGAGGTCATCATGTTAAGGCCCCATAGAAC
CAGCGCACCAGAGTAGCAACCATCGTCGATGA-A-AAAGTCGTAGATCAGAAGGATCAAACATGTAAGCACC--------
--CA----------AAC----------GAAGA----------C-----TGGATCCAAACAGGTCCACTGAAGACCAG---
CACCGACCGAATCCCGCAAGATCCAACGGATACAAACCTCCACACGCCCTCCGACGATGCAACACGCACCATCGGGACAT
GGATAGAACGTGGGAGACATTATTCCTAACAAGGGACATCACCGCCGCCACACAGTCCCAATCAAGACGCTAAAACTAAC
AAGAACGAGAACGGGGTCCCTCCCGCCGGCG--------GGGGGCC------GAGATCCTCTGCACCTCCATGGCCT---
--AGAGGCCATCAGAGATGGGACGGACCGGCGACAACACCGACGGGAGGAGAAGA-GCTTTTCTT---------------
-----------------------------------------------------
>chr3B_2558
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-------------------------TATTCATCTTCAATCATGGCAGTATAAAGAACAACAGAGGTAATAAAAATTTCAA
TCATGTCCGTGGATCACCTAGCGACGACTACAAGCATTGGAGCGAGCTGAAGGCGTGCACCAC---CGTCATCTTCC---
---CTCTTTCGTCGGAGCCGGGCAA---ACTTTGTTGTAGTAGATAGTCGAGAAGTTGTTGTGCTAAGGCTTT----AAC
CAACGCACCAGAGTAGCAACCATCGTTAATGA-ATAGTGTCTTAGATCAGAAGGATCAAACATGTAAACACC--------
--TA----------AAC----------GAAGA----------C-----TGGATCCAAATAGATCCACCAAAGACCAG---
CATCGACCGAATCCCGCAAGATCTAACGGAGACAAACCTCCACACGCACTCCGACGAAGCTAGATGCACCATCTGGAGAG
GGATAGAACGTGGGAGACATTATTCCTACTAAGGGATATCGCCGCCACCACAGAACCCCAACCAAGACGCTGAATCAAAC
AAGAACGAGAACAGGGTCCCTCCCGCCGGCA--------GGGGGCC------GAGACCCTTCGCACCTCCATGGCCT---
--AGAGGCCATCGGAGATGGGACGGATCGATGGCGGCGTCGACGGGAGGAGAGAG--CTTTTCTT---------------
-----------------------------------------------------
>chr2D_2558
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-------------------------TATTCATCTTCAATCATGGCAGTACAAAGAACAACAGAGGTAATAAAAACTACAA
CCATGTCCGTGGACCACCTAGCGACGACTACAAGCATTGGAGCGAGCCAAAGGTGCGC--CGC---CGTCATCGACC---
---CTCCCTCATCGGAGCCGGATAA---ACCTTCTTGTAGTAGAAAGTCAGGAAGTCGTCGTGCTAAGACCCTATAGGAC
CAGCGCACCGGAGTAGCAACCATCGTCGATGA-AGAAAGTCGTAGATCAGAAG--TCAAACATGTAAACACC--------
--TAAACAAAGACGAAC----------AAAGA----------C-----CGGATCCAAATAGATCCATCGAAGACCAG---
CACCGACTGAATCCCGCAAGATCCGACAGAGTCAAACCTCCAAACGCCCTCCAGTGATGCTAAACGCACCATCACGACGG
GGATAGAACATGGGAGACATTATTCCTACTAAGCGACATCGCCACCGCCATACAGCCCCAACTAAGACGCTGAATCT--C
AAGAACGAGAACGGGGTCCCACCCACCGGCG--------GGGGGCC------GAGATTCTCAGCACCTCCATGGCCT---
--AGAGGCCATCGGAGATGGGATGGACTGGCAGCAGCGCTGACGTGAGGAGAGGG--CTTTTCTT---------------
-----------------------------------------------------
>chr6A_2620
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---------------------CGACGATTACAAGCACTGGAGTGAGCCGAAGGCGCGC--CGC---CGTCATCGCCT---
---CTCCCTCACGGGAGCCAGGCAACAAACATTATTGTAGTAGGCAGTCGGAAAGTCGTCGTGCTAAGGCCCG-TAGGAC
CAGCGCATCAAAGCATCAACCGTCGCTGATGAGA-AAAGTCGTATATCAGAAGGATCAAACCTGTAAACACT--------
--CA----------AAC----------GAAGA----------C-----CAGATCAAAACAGATCCACCGAAAACCAGCAC
CACCGACCGAATCCCGCGAGATCCAACGAAGACACACCTCCACACGCCCTCCGACGATAGCAGACGCATCATCGGGACAT
GGATAGAACGCGGGAGACATTATTCCTACCAAATGACACCGTCGTCACCATACAACCCCAACGAAAATGTTGAATCTAAC
AAGAACGAGAATGGAGTACCTCCCGCCAAC---------GGGGGCC------GAGATCCTCCTCACCTCCATGGCCA---
--AGTGGCCATTAGATATGGGGCAGACCGGTGGCGGCATCGATGGGAGGAGAAGGGACTTTTCTT---------------
-----------------------------------------------------
>chr4D_2620
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---------------------CGACGACTACAAGCACTGGAGCGAGCCGAAGGCGCGC--CGC---CGTCATCGCCT---
---CTCCCTCACCGGAGCCGGGCAA---ACCTTGTTGTAGTAGACAGTCGGGAAGTCGTCGTGCTAAGACCCCATAGGAC
CAGCGCACCAGAATAGCAACCATCACCGATGA-AGAAAGTCGTAGATCAGAAGGATCAAACCTGTAAATACC--------
--TA----------AAC----------AAAGA----------C-----TGGATCCAAATAGATCCACCGATGACCAG---
CACCGACCAAATCCCGCAAGATCCGATGGAGACAAACCTCCACACGCCCTACGATGATGCTAGACGCACCATCGGGACGG
GGATAGAACGTGGGAGACATTATTCCTACTAAGGGACACCGCCACTGGCACAGAGCCCCAACCAAGACGCCGACTCTGCC
AAGAACGAGAACGGGGTCCCTCCTGCTGGCG--------GGGGGCC------GAGATCCTCCGCACCTCCATGGCCT---
--AGTGGCCATTGAAGATGGGACAGACTGGCGGCGGCGCCGATGGGAGGAGAAGA-GCTTTTCTT---------------
-----------------------------------------------------
>chr3A_2620
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---------------------CGACGACTACAAGCACTGAAGCAAGTCGAAGGCGCGC--CGCCACCGTCAGTACCC---
---CTCCCTCGTCGGAGCTGGGCA---AACCTTATTGTAGTAGATAGTCGGAAAGTCGTCGTGCTAAGCCCGCATAGGAC
TAGCGCACTAGAGCAACAACCATCTCCAATGA-AGAAAGTCGTAGATCAAAAAGATAAAACCTGTAAATAGC--------
--CA----------AAC----------GTAGA----------C-----GAACTAAGATCAGATCCACTGAAAGCCAG---
CACCGACCGAATCCTGCGAGATCCGGCGGAGACACACCTCCACATGCCCTCCAAAGACACTAGACACACCATCGGTACGG
GGATAGAATGCGGGAGACATTATTCCTACTAAGGGACATCGCCGCCGCCACGCAGCCCCAACCAAGACGTTGAACCTAAC
AAG-ACGAGAACGGGGTCCCTCCCGCCAGCG--------GGGGGCA-------AGGTCCTCCGCACCTCCATGGCCC---
--AAAGGCCATCAGAGATGAGGGGGACCGGCGACGGTGCCGACGAGAGGAGGAAA-GC----------------------
-----------------------------------------------------
>SNPs
-------------------------------------------------------------------S-S--------S-
-----------------------------------------------SSSSSSSS-------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
----------------S---------------------------S-----------------------------------
-----------------------S----------------S-------------S-----S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-------S------------------------------------------------------------------------
S---------------------------------S--------------------------------------------S
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------S----------------------S------------------------------------------------
S-------------------------------------------------------------------------------
-------S---------------S--------------------------------------------------------
--SSSSSSSSS------------S-----------------------------S-------------SS--S-S------
---S-S-------------------------SSSSSS--------------------------------S---------S
----------------------S-----S----S-----------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S---------------------------------------------------------------------------S---
------S--------------S-----S----------------------------------------------------
---------SSS------------------------------S----------------------S--------------
----------------------------------S--------------------------------S--S---------
--------SS-------------------------------------------------S--S-----------------
--------------------------------------------------------------------------------
-------------S-----S------------------------------------------------------S-----
------S----------------------S--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------------------------S---------------------------S------------
-S------------------------------------------------------------------------------
-----------------------------------------S---------------------------SSS-SS--S-S
S--------S--------S---------------S------S---------------------------S----------
-S-------S-----S--------S-S---SSSSS-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
--------------------------------------------------------------------------------
--------------------------------------SS-------------------------------------S--
-S------------------S---------------S---------S---------------------------------
----------------S-----S---S------------------------------------------S----------
----------------------------------------------------------------S------S--------
--------------------------S------------S-----------S----------------------------
--------------------------------------------------------------------------------
-----S----------S----S-----------S-S--------------------S-----------------------
-----------S--------------------------------S--------------------S--S--SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1072
--------------------------------------------------------------------------------
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------------GCATCTCGCTCATTCCTGCT------------------------------------------------
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>reverse_2896
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---------------TTCGTGCGGCCAAAAATACC---------------------------------------------
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-----------------------------------------------------
