>input_sequence_57663
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ATGTTGAGCTGGCTCCGTTGTTTC
CCGCACGACGGCACCGTCATGGACGAGGAGAGGAAGCCCAGGCCCGGGAGGAGCGCCACTTTCAGGAAGAAGCATAGCCC
CGATGCCGCGCCGTCTCGGAAACGGTTCGTCCGGTCGGGCACCTCGCTCACCGCGTCCTCGTCGGCACGAGCCAGCTTCG
GCCGCCACTCCGTCGACGTCCCCAACTACAACCACAGCATCGTCTCGGCGCGCTCCTTCACCTTCCCTGAGCTCGCCGCC
GCCACGGACAGCTTCAGCCATGCCAACCTCATCGGCGAGGGCGGCTTCGGCCGCGTCTACAGAGGCCTCATCGGCTCGTC
GGC---GGTGGCCGTCAAGCAGCTCGACCGCACGGGGTTCCAGGGCGACCACGAGTTCCTCGTGGAGGTGCTGGTGCTGA
GCAGCCTCCTGACCCACCCCAACCTCGTCGGCCTCCTGGGCTACTGCGCCGACGGCAACCAGCGGCTCCTCGTCTACCAA
CTCATGCCGCTCGGCTCCCTCGAAAATCACCTCTTCCTCCCCCGAGTCCCAGCGGACGGCGAAGAGAAGCCACCACCGCC
GGTTCTGCCG------------TGGCGGACCAGGATGAGGATCGCGCACGACGCCGCCCAGGGCCTGGAGTTCCTCCACG
AGACTGCCAACCCGCCGGTGATCTACCGCGACCTCAAGTCCTCCAACATCCTCCTCGACGAGGGATACAACGCCAAGCTC
TCCGACTTCGGCCTCGCCAAGCTGGCCACACCGATCACCCGCAACGGCAAGGGCGGTGACGCGGAGGAGGAGAAGGACGG
TTCGTCGAGGGTGATGGGCACGTACGGTTACTGCGCGCCGGAGTACGTGAGGAAGGGGCACCTGACGGTGAAGTCGGACG
TGTACAGCTTCGGCGTGGTGCTGCTGGAGCTCATCACCGGCAGGCGGGTCATCGACGAGAGCAGGCCCTCTGGGGAGCAG
AACCTCGTGGCCTGGGCGGCGCCCATGTTCAGCGAGCAGAGGAGGATGCACGAGCTGGTGGATCCGCTCCTGGTAGAAGG
GCCGAGCGGCAGGGAGCTGAAGCAGGCGGTGGCGGTGGCGGCTATGTGCTTGCAGGAGGAGGACACCGTAAGGCCCATCA
TGTCGGACGTCGTCATGGCGCTCAGCTTCGCCGCCGACGAC---TTACCCTCGGCTCCCAGATACACGTCACTTTAG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr4D_1_TraesCS4D01G130300
TCTTGCACTAGTTTACACTTGTTCTTTCACAATACTGAAATGTGCAAGTTTTGCATATTTTGTGTGCAAGTTTTTAATAT
ATTTTGAATCCTCTCTATATGAAAA----------------GTCTTTATGATTGTCCATCTTAGGCATATTTGCATAATA
CCACTTTCTTTTTCTTTTTACTACCCATATTATTTTTGTCTTAAGTAAAAAAA--TCAAGCTTATAAAAAAGAATACTTA
CATTCACAATGCCAAGTTTCTA-TTTCATGTTCTTTCTTCTTTAGGGTAATACCAATGCCCACAATTCATTTTACCTTAG
AATGTTTT----------------TTATTTTAGTATTTTTTG---TGTTTAAGTTTAAGCTTATTTTTTTAT--TACAAC
GAATTTTATTTAACCAGGCCGTTTTGTTGATCTTAATTCCACACCTTATAGCCCGTAGTGTAAGAATATTGTGGAAATTC
GATATGACCAATGTAATTTATTGTGTGGTTCTAATTTTAAAAATAGCATAATAGTTGCTAAAATAAAAAACC-AGAATCA
ATGTTTTAATTCCCTCTTTTCTCCTCTCATTAATTTGTATAAGTATAGTGTATGCATGCGCAAGCAAATATACT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TGTTAAGAAAAG
TTTTACATTCACATGCATAGTGTGTGCGCATGCACAAATGAC-AGATTTTAGCAAGCTGATTGGATAATAT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ATATTTTCAGGCACGTGACACATAGGTGA
TCCCTGAATAGATTAGAAGTTTTCCCCACAAAAAAAAGAGAGAGAAAAGGAAAAGAAAAGCAGGAATAGCTCGAATTTAC
AAGTAAGAAACGAACAGCGGGGCGCTTGCCATGAATAGGCAGTATGCATTCAAAACCGCGGTCACCATGGACGGCCAGCC
GGCCACCCCTCGAAATTAAAGGCTGTGCATTTCGCATGCTTCCCCCGAGCCAAATCGCCCTGCCTGCATTGCTTCCTGAT
CACCCATTCCTACTCCCGGCCGGGCTCCCGGCCGGCCGGCCGGCAAGCACTACAAGATGTTGAGCTGGCTCCGTTGTTTC
CCGCACGACGGCACCGTCATGGACGAGGAGAGGAAGCCCAGGCCCGGGAGGAGCGCCACTTTCAGGAAGAAGCATAGCCC
CGATGCCGCGCCGTCTCGGAAACGGTTCGTCCGGTCGGGCACCTCGCTCACCGCGTCCTCGTCGGCACGAGCCAGCTTCG
GCCGCCACTCCGTCGACGTCCCCAACTACAACCACAGCATCGTCTCGGCGCGCTCCTTCACCTTCCCTGAGCTCGCCGCC
GCCACGGACAGCTTCAGCCATGCCAACCTCATCGGCGAGGGCGGCTTCGGCCGCGTCTACAGAGGCCTCATCGGCTCGTC
GGC---GGTGGCCGTCAAGCAGCTCGACCGCACGGGGTTCCAGGGCGACCACGAGTTCCTCGTGGAGGTGCTGGTGCTGA
GCAGCCTCCTGACCCACCCCAACCTCGTCGGCCTCCTGGGCTACTGCGCCGACGGCAACCAGCGGCTCCTCGTCTACCAA
CTCATGCCGCTCGGCTCCCTCGAAAATCACCTCTTCCTCCCCCGAGTCCCAGCGGACGGCGAAGAGAAGCCACCACCGCC
GGTTCTGCCG------------TGGCGGACCAGGATGAGGATCGCGCACGACGCCGCCCAGGGCCTGGAGTTCCTCCACG
AGACTGCCAACCCGCCGGTGATCTACCGCGACCTCAAGTCCTCCAACATCCTCCTCGACGAGGGATACAACGCCAAGCTC
TCCGACTTCGGCCTCGCCAAGCTGGCCACACCGATCACCCGCAACGGCAAGGGCGGTGACGCGGAGGAGGAGAAGGACGG
TTCGTCGAGGGTGATGGGCACGTACGGTTACTGCGCGCCGGAGTACGTGAGGAAGGGGCACCTGACGGTGAAGTCGGACG
TGTACAGCTTCGGCGTGGTGCTGCTGGAGCTCATCACCGGCAGGCGGGTCATCGACGAGAGCAGGCCCTCTGGGGAGCAG
AACCTCGTGGCCTGGGCGGCGCCCATGTTCAGCGAGCAGAGGAGGATGCACGAGCTGGTGGATCCGCTCCTGGTAGAAGG
GCCGAGCGGCAGGGAGCTGAAGCAGGCGGTGGCGGTGGCGGCTATGTGCTTGCAGGAGGAGGACACCGTAAGGCCCATCA
TGTCGGACGTCGTCATGGCGCTCAGCTTCGCCGCCGACGAC---TTACCCTCGGCTCCCAGATACACGTCACTTTAGCAT
ATTACTATATCTGGTGGCATTGGCTAACATTGTGTGGTTTTTATCCGGTGGCATTGGCTAACATTGTGGGGTTTGCGTCT
T-ACAAAATGAAATAATAAAACAGGGGA-TTCGGCTCAGATTTCAAGTCGCAAACCTTGCAAAATACCACC-------GC
TAAATACCATGAATTTCCTACATACTCCCTCCGGTCCGAAATATAAGATCATTTAGAGATTTCAATATAT--ACTACATA
CAGAGCAAAATAAGTGAATATACGCTCTAAAATATGTGTAGTCCGTATTGAAATCTCTAAAAGGGCTTATATTTAGAAAC
GGAGGGAGTACATACATA--CAGAAAATAAAATATCGAAGCATGGCATATTAGTTCTTACCACAGGCTGAACAAAAGGAA
ACTCTTTAAAGACGGGAGACTACATGTACAGCAACAGACCCTCAGTTCCTGCTAGCTAGCTAGCTATGCTACAGACTTTT
GCCTACAGGCAGGCACAATGGAGGAGCTTTGCACCCTTCCCTAAATTCT---ACTGCCTCCAAAGTGATCACCATGAATC
ATTAAAGGAAAATGGTAGAAAAAGAAAAAAG--AACTGCTTCCTATATAGATAGGTACCACTGCGTTCATTTTCATCCTT
CTTGGAAAGACAGACATGGAGGGACAGTCAGTCCTGGATCACAAACAAAACCAGAGGAACCATTCCACCAAGCGGACAGC
ATACATCTCACACCTCCGCGCCGACCAACCAATAGCACGGGGGC------CTATGGACGCTAATCAGAATCTGACTCGAC
AGCTAGTACGGATTTTGGTCGAACTGACCGTGGCTGCCCAGACAGTGAGGAAGTGCCACCAGATCTATCCCCAGCAAAGT
CGTCGTCGTCATTGCCACTCATGAGAACTGAAGCTGCACATGAGGAATCAAATGTTAGACCTTTCGGTGAAAATGCAGAG
GCACGATTATATGGGCCACTGCTCACAGTCTTCACAAAGTATAAAGAAGCAAAATGCTTCC
>chr4A_1
TCTTGCACTAGTTTACACTTGTTGTTTCACAATACTGAATTGTGCAAGGTTTGAACATTTTATGTGCAATGTTTTAATAT
ATTTTGAATCCTCTCTATATGAAAAAAAAGTTTGACAACAAGTCTTTATTATTGTCCATCTTAGGCATATTTGCATAATA
CCACCCTTTTTTCCTACCC------------ATATTTGTCTTAAGTAAAAAAA-ATCAAGCTTATAAAAAAAT-TACTGA
CATTCACAATGCCAAGTTTTTTCTTTCATGTTCTTTCTTCTTTAGAGTAATACCAATGCCCATAATTCATTCTACCTTAG
ATTTTTTTTG-------T------TTATTTTGGTATTTTTTTATTTGTTTAAGTTTAAGCTT---TTTTTAA--TACAAC
AAATTTTGTTTAACCAGGTCGTTTTGTTGATCTTAATTCCACATATTATAGCCCGTAGTGTAAGAATGTTATGGAAATAC
GGTATGACCAATGTAATTTATTGTGTGGTCTTAATTTTAAAAATAGCATAATGGTTGCTAAAATAAAAAACC-AGAATCA
ATGTTTTAATTCCCTCTTTTCTCCTCTCATTAATTTGTACAAGTATAGTGTATGCGTGTGCAAGCAAATATACT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TGTCAAGAAAAG
TTTTACATCCACATGCATAGTGTGTGCGCATGCACAAATGAC-AAA-TTTAGCAAGCTGATTGGATAATAT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GCATTTTCAGGCACGTGACACATAGGTGA
TCCCTGAATAGATTAGAAGTCTTCCCCGCAAAAAGAAAAA--AGAAAAGGAAAAGAAAAGCAGGAATAGCTCGAATTTAC
AAGTAAGCAACGAACAGCGGGGCGCTTGCCATGAATAGGCAGTATGCATTCAAAACCGCGGTCACCATGGACGGCCAGCC
GGCCACCCCTCGAAATTAAAGGCTGTGCATTTCGCATGCGTCCGGCGAGCCAAATCGCCCTGCCTCCATTGCTTCCTGAT
CACTCATTCCTACTCCCGGCCGGGCTCCCGGCCGGCCGGCCGGCAAGCACTACAAGATGTTGAGCTGGCTCCGTTGTTTC
CCGCACGACGGCACCGTCATGGACGAGGAGAGGAAGCCCAGGCCCGGGAGGAGCGCCACTTTCAGGAAGAAGCATTGCCC
CGATGCCGCACCGTCTCGGAAACGGTTCATCCGCTCGGGCACCTCGCTCACCGCGTCCTCGTCGGCACGAGCCAGCTTCG
GCCGCCACTCCGTCGACGTCCCCAACTACAACCACAGCATCGTCTCGGCGCGCTCCTTCACCTTCCCTGAGCTCGCCGCC
GCCACGGACTGCTTCAGCCATGCCAACCTCATCGGCGAGGGCGGCTTCGGCCGCGTCTACAGAGGCCTCATCGGCTCGTT
GGC---GGTGGCCGTCAAGCAGCTCGACCGCACGGGGTTCCAGGGCGACCACGAGTTCCTCGTGGAGGTGCTGGTGCTGA
GCAGCCTCCTGACCCACCCCAACCTCGTCGGCCTCCTGGGCTACTGCGCCGACGGCAACCAGCGACTCCTCGTCTACCAA
CTCATGCCGCTCGGCTCCCTCGAAAATCACCTCTTCCTCCCCCGAGTCCCAGCGGACGGCGAAGAGAAGCCACCACCGCC
GGTTCTGCCG------------TGGCGGACCAGGATGAGGATCGCACACGACGCCGCCCAGGGCCTGGAGTTCCTCCACG
AGACTGCCAACCCGCCGGTGATCTACCGCGACCTCAAGTCCTCCAACATCCTCCTCGACGAGGGATACAATGCCAAGCTC
TCCGACTTCGGCCTCGCCAAGCTGGCCACACCGATCACCCGCAACGGCAAGGGCGGCGAGGCGGAGGAGGAGAAGGACGG
CCCGTCGAGGGTGATGGGCACGTACGGGTACTGCGCGCCGGAGTACGTGAGGACGGGGCACCTGACGGTGAAGTCGGACG
TGTACAGCTTCGGCGTGGTGCTGCTGGAGCTCATCACCGGCAGGCGGGTCATCGACGACAGCAGGCCCTCTGGGGAGCAG
AACCTGGTGGCCTGGGCGGCGCCCATGTTCAGCGAGCAGAGGAGGATGCACGAGCTGGTGGATCCGCTCCTGGGAGAAGG
GCCGAGCGGCAGGGAGGTGAAGCAGGCGGTGGCGGTGGCGGCCATGTGCTTGCAGGAGGAGGACACCGTAAGGCCCATCA
TGTCGGACGTCGTCATGGCGCTCAGCTTCGCCGCCGACGACGACTTGCCCTCTGCTCCCAGATACACGTCACTTTAGCAT
ATTACTATATCTGGTGGCATTGGCTAACATTGTGTGGTTTCTATCTGGTGGCATTGGCTTACATTGTGGGGTTTGCGTCT
TGACAAAATGAAATAATAAAACAGGGGATTTCGGCTCAGATTTCAAGTCGCAAACCTTGCAAAATACCA-----------
---------TGAAACTCCTACATACTCCCTCCGGTCCGAAATATAAGATCATTTAGAGATTCCAATATA--GACTATATA
CGGAGCAAAATGAGTGAATCTACGCTCTAAATA---TGTGGTCTGTATTGAAATCTCTAAAAGTGCTTATATTTAGAAAC
GGAGGGAGTACATACATATACAGAAAATAAAATATCGAAGCATGGCATATTAGTTCTTACCACAGGCTGAACAAAAGGAA
ACTCTTTAAAGACAGGAGACTACATGTACAGCAACTGACACTCAGTTCCTGCTAGCTAGCTAGCTATGCTACATACTTTT
GCCTACAGGCAGGCACAATGGAGGAGCTTTGCACCCTTCCCTAAATTCT---ACTGCCTCCAAAGTGGTCACCATGAATC
ATTAAAGGAGAATGATAGAAAAAGAAAAAAAAAAACTGCTTCCTATATAGATAGATACCACTGCGTTCATTTTCATCCTT
CTTGGAAAGACAGACATGGAGGGACAGTCAGTCCTGGATCACAAACAAAACCAGAGGAACCATTCCACCAAGCGGACAGC
ATACATCTCACACTC-CGCGCCGACCAACCAGTAGTACGGGGGCACCAAACTATGGACGCTAATCAGAATCTGACTCAAT
GGCTAGTACGGATTTTGGTCGAACTGACCGTGGCTGCCCAGACAGTGAGGAAGTGCCACCAGATCTATCCCCAGCAAAGT
CGTCGTCGTCATTGCCACTCATGAGAACTGAAGCTGCACACGAGGAATCAAATGTTAGACCTTTCGGTGAAAATGCAGAG
GCACGATTATATGGGCCACTGCTCACTGTCTTCACAAAGTATAAAGAAGCAAAATGCTTCC
>chr4B_1
TCTTGCACTAGTTTACACTTGTTCTTTCACAATACTGAATTGTGCAACTTTTGCATATTTTGTGTGCAAGTTTTTCATAT
ATTTTGAATCCTCTCTATACGAAAAAAGTTTGGCAAGTCT--------------------TTAGGCATGTTTGCACAATA
CCACTTTCTTTTTCTTTTTACTACCCATATTATTTTTGTCTTGAGTAAAAAAA-ATCAAGCTTATAAAAAAGAATACTAA
CATTCACAATGCCAAGTTTTT-CTTTCATGTTCTTTCTTCTTTGGGGTAATACCAATGCCCAT-ATTCATTCTACCTTAG
AATTTTTAAATTTTTGTT------TTATTTTGGTA--TTTTTATTTGTTTAAGTTTAAGCTT---TTTTTTTACTACAAC
AAATTTTGTTTAACCAGGTCGTTTTGTTGATCTTAAGTCCACACCTTATAGCCCGTAGTGTAAGAATATTGTGGAAATCT
GATATGACCAATGTAATTTATTGTGTGGTTTTAATTTTAAAAATAGCATAATGGTTGCTAAAATAAAAAAACAAGAACCA
ATGTTTTAATTCCCTCTTTTCTCCTCTCATTAATTTGTATAAATACAGTGTATGCGTGTGCAAGCAAATATACTCCTTCC
ATTCCCTAATATAAGACCTTTTAGCTATTACAAAATATTGACTACATACGTACTAAAATGAGTGAACATACATGCCAAAA
TGTGTCTGAATATGTATGAATCAAGAAAAAAGTTAAAAGATCTTATATGAGGGAATGGAGGGAGTACTTGTTACGAAAAG
TTTTACATTCACATGCATAGTGTGTGCGCATGCACAAATGATAAAA-TTTAGCAAGCTGATTAGATAACATATACTCCCT
CCGTTCCAAATTACTCGTCGCTGAAATGGATGTCTCTAGAATTAAAATACATCTAGATACATCCATATATGAGACAAGTA
ATTCGGAACGGAGGGAGTACTTACTAGTACTAGTATTATAGGTTGATGCCCCATACTCGGTTAAATTTATTGTCAAATTT
AAATCTTGAAAAGCTCAGGCGCATTACATTGCGAAACGGAGGGAGTACTTAAAATCGACTGGAAGGAGAAGAATCATTCA
GTCAACCCAGCGATCTTGTTTTTCTGCCTTTGAACGCAAATCCAACAAGAAATATTTTCAGGCACCTGACACATTGGTGA
TCTCTGAATAGATTAAAAGTTTTCCTCGCCAAAAAAAAG-------AAGGAAAAGAAAAGCAGGAATAGATCGAATTTAC
AAGGAAGCAACGCACAGCGGGGCGCTTGCCATGAATAGGCAGTATGCATTCAAAACCGCGGTCACCATGGACGGCCAGCC
GGCCACCCCTCGAAATTAAAGGCTGTGCATTTCGCATGCTTCCCCCGAGCCAAATCGCCCTGCCTCCATTGCTTCCTGAT
CACCCATTCCTACTCCCGGCCGGGCTCCCGGCCGGCCGGCCGGCAAGCACTACAAGATGTTGAGCTGGCTCCGTTGTTTC
CCGCACGACGGCACCGCCATGGACGAGGAGAGGAAGCCCAGGCCCGGGAGGAGCGCCACTTTCAGGAAGAAGCATAGCCA
CGATGCCGCGCCGTCTCGGAAACGGTTCATCCGGTCGGGCACCTCGCTAACCGAGTCCTCGTCGGCACGAGCCAGCTTCG
GCCGCCACTCCGTCGACGTCCCCAACTACAACCACAGCATCGTCTCGGCGCGCTCCTTCACCTTCCCCGAGCTCGCCGCC
GCCACGGACAGCTTCAGCCATGCCAACCTCATCGGCGAGGGCGGCTTCGGCCGCGTCTACAGGGGCCTCATCGGCTCGTC
GGC---GGTGGCCGTCAAGCAGCTCGACCGCACGGGGTTCCAGGGCGACCACGAGTTCCTCGTGGAGGTGCTGGTGCTGA
GCAGCCTCCTGACCCACCCCAACCTCGTCGGCCTCCTGGGCTACTGCGCCGACGGCAACCAACGACTCCTCGTCTACCAA
CTCATGCCGCTCGGCTCCCTCGAAAATCACCTCTTCCTCCCCCGAGTCCCAGCGGACGGCGAAGAGAAGCCACCACCGCC
GGTTCTGCCG------------TGGCGAACCAGGATGAGGATCGCGCACGACGCCGCCCAGGGCCTGGAGTTCCTCCACG
AGACTGCCAACCCGCCGGTGATCTACCGCGACCTCAAGTCCTCCAACATCCTCCTCGACGAGGGATACAACGCCAAGCTC
TCCGACTTCGGCCTCGCCAAGCTGGCCACACCCATCACCCGCAACGGCAAGGGCGGTGATGCGGAGGAGGAGAAGGACGG
CTCGTCGAGGGTGATGGGCACCTACGGTTACTGCGCGCCCGAGTACGTGAGGAAGGGGCACCTGACAGTGAAGTCGGACG
TGTACAGCTTCGGCGTGGTGCTGCTCGAGCTCATCACCGGCAGGCGGGTCATCGACGAGAGCAGGCCCTCTGGGGAGCAG
AACCTCGTGGCCTGGGCGGCGCCCATGTTCAGCGAGCAGAGGAGGATGCACGAGCTGGTGGATCCGCTCCTGGTAGAAGG
GCCGACCGGCAGGGAACTGAAGCAGGCGGTGGCCGTGGCGGCCATTTGCTTGCAGGAGGAGGACACCGTAAGGCCCATCA
TGTCGGACGTCGTCATGGCCCTGAGCTTCGCCGCCGACGACGACTTACCCTCTGCTCCCAGATACACGTCACTTTAGCAT
ATTACTATATCTGGTGGCATTGGCTAACATTGTGTGGTTTTTACCTGGTGGCATTGGCTAACATTGTGGGGTTTGCGTCT
TGACAAAATGAAATAATGAAACGGGGGATTTTGGCTCACATTTCAAGTCGCAAACCTTGCAAAATACCACCGCTAAATGC
TAAATACCATGAATTTCCTACATACTCCCTCTGGTCCGAAATATAAGATCTTTTAGAGATTTCAATATATAGACTACATA
CGGAGCAAAATGAGTGAATCTACGCTCTAAAATATGTGTAGTCTGTATTGAAATCTCTAAAAGTGCTTATATTTAGAGAC
GGAGGGAGTACATAC--ATACAGAAAATAAAATATCGAAGCATGGCATATTAGTTCTTACCACAGGCTGAACAAAAGGAA
ACTCTTTAAAGACGGGAGACTACATGTACAGCAACTGACCCTCAGTTCCTGCTAGCTAGCTAGCTATGCTACAGACTTTT
GCCTACAGGCAGGCACGATGGAGGAGCTTTGCACCCTTCCCTAAATTCTTCTACTGCCTCCAAAGTGATCACCATGAATC
ATTAAAGGAGAATGATAGAAAAAGAAAAAAG--AACTGCTTCCTATATAGATAGATACCACTGCGTTCATTTTCATCCTT
CTTGGAAAGACAGACATGGAGGGACAGTCAGTCCTGGATCACAAACAAAACCAGAGGAACCATTCCACCAAGCGAACAGC
ATGCATCTCACACCT-CCGGCCGACCAACCAATAGTACGGGGGCACCCAACTAGGGACGCTAATCAGAATCTGACTCAAT
AGCTAGTACGGATTTTGGTCGAACTGACCGTGGCTGACCAGACAGTGAGGAAGTGCCACCAGATCCATCCCCAGCAAAGT
CGTCGTCGTCATTGCCACTCATGAGAACTGAAGCTGCACACAAGGAATCAAATGTTAGACCTTCCGGTGAAAATGCAGAG
GCACGATTATGTGGGCCACTGCTCACTGTCTTCACAAAGTATAAAGAAGCAAAATGCTTCC
>chr3D_1
TCCTGCACTAATTTACACTTGTTCTTGCACAATACCGAGTTGTGCAAGTTTTGCATATTTTGTGTGCAAGTTTGTAATAT
ATTTTGATCCCTCTTTATAAGAAAAATGTTCAACCAG--AAGTCTTTATGATTGTCCATGTTAGGCATATTTGCATAATG
GCACTTCCTTTT-CTTTTGACTACTTATATTATTTTTGTCTTAAGTAAAAAAACATCAAGCATATAGAAAAGAATATCGA
CATTTCGGATGCCAAGTTTTTT--------TTCTTTCTTCTTTAGGGTAACACCAATGCCCCTAATTCATTCTACCTTGG
AAAATTTCAGTTTTTTTTATGTAGTTATTTTATATTTTTCTG---AGTTTAATT-----------TTTTTAT--TGCATC
GGACTTTGTTTAACTAGGTCGTTGTGTTGATCTTAACTCCACACCTTAAATCCCGTCATATAAGAATATTATGGAAATCC
GATATGACCAATATAATTTATTGTGTGTTTTTATTAA-AAAATTAGCATAATGTTTGCTACAATAAAAAAACTAGAACCA
ATGTTTTAATCCCCTCTTTTCTCCTCTCATTAATTT------ATACAATGTACGTGTGGGCAAGCAAATATAAT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TGTTAAGAAAAT
TTATGTACAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>chr3B_1232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GCGCGCGCCTTCACCTACGACCAGCTCGCCGAC
GCCACCGGCAACTTCCGCGCCGACTGCCTGCTCGGCGAGGGCGGCTTCGGCCGCGTCTACCGGGGGCGCCTGGACGACGG
CCAGCTGGTGGCGGTGAAGCAGCTGGACCTGGAGGGCCTGCAGGGCGACCGCGAGTTCGTGGTGGAGGTGCTCATGCT--
-CAGCCTCCTCCACCACCACAACCTCGTCAGCCTCGTCGGCTACTGCTCCCACGGCCACCAGCGGCTGCTCGTCTACGAG
TACATGGCGCTCGGCTCCCTCGCCGACCACCTCCTCCTCCTCGACGACCGCTTCGCCGGCGAGGGTACCCCGAGGGCGAG
GGCGTCGCCGGCCGCGCTGAGCTGGGAGACGCGGATGCGGGTGGCGCTGGGCGCCGCGAGGGGGCTCGAGTACCTCCACG
AGACGGCCAACCCGGCCGTCATCTACCGCGACCTCAAGTCCTCCAACGTCCTCCTCGACGACGCCTTCTGCCCCAAGCTC
TCCGACTTCGGCCTCGCC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>SNPs
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
-------------------S-S----------------------------------------S--------S--------
---S----------------------------------------------------------SSS---------------
-------S----------S-----------------------------------------------------------S-
------------------------------S---------------------S---------------------------
-------------------------------------------------------S--S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S---------S-SSS--------------------------------------
-------S------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
----------------------------------------------------S---------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S---------S-------S-----------------------S-------------------S----------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
---------S----S---------------------------------------S-------------------------
--------------------------------------------------------------------------------
---------------S-------------------S-----------------------------------------S-S
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------S----------------------------------
>forward_847
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCGCATGCACAAATGACAGAT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_2693
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GGCTCCCAGATACACGTCAC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_2321
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GGAGGAGGAGAAGGACGG
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_3520
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
AGCTAGTACGGATTTTGGTCG-----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
