>input_sequence_57644
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------------ATGGTTGCCACTGCCATTTCTGCCCGTCCGTCCCAGCGAGCGTCGAGAAGCAGCGCAGCGAAGCGAGG
CAAAGACACCAGTGAGGTTACTACA-------------------ACGATGGCGAGCAGGCGAGGGGAGGAGGTCTACGGG
GATGGGATGGAGGAGGAGTACATCGACATGGACCTGAGCCCCCCGGCGGCGGGGAGGGAGTTCGAGTTCCACTTCCACAT
GTCCGCGCCGCTGGACAGGTCGGGGCAGCCGCCGCTGGCGTCCCCGGCCGACGAGCTCTTCTACAAGGGCAAGCTGCTCC
CGCTGCACATGCCGCCGCGTGTCCAGATGGTCGAGGAGCTCCTCCTCGACGGCGCCGTCCGGGGCAGGGCCGGCCCGCGG
CTCGGCGGCCTCGCCGTCAGCACCGCCCCCGCCACGCCCTGCGAGCGCTCCCGCGGCGTGTCGCCGGCCAACTCGTGCTT
CGTCAGCGGGGAGCTCAACGTGGAGGAGTTCTTCCGGGAGTACGCGGCCGGCATGGCTCTCGCCGACGACGACGACGACG
CCGCATCGGCGGCCGGCGGCGAGAAGAAGCCCTGGTCCCGGAGGCTCCGGTTCGTCCGGCAGCTCAACCTCGGCCGCCAG
CTCAAGGCCTCCAAGGCCTACCTCAAGACCATGTTCGCCGGGAAGCAAGCGGGAGCCGGCGGCGACGACAAGCACGGGTT
GGGCGGAAAGGACCTCTCCG------------------GCCATGGCCACCACCCCCGGGCGTGGAGGAAGAACCCGTTCG
GACACATGAGAAGCAACAGGTGCATCACCGAGCAGAGCAGCGGCGGCGGCGGCCGCGCCGGGCACCGGAGGTCCTTCTCC
AGCGTCGTCGTCCGGTACTCGGCGTCCAACAAGACGTCCCCCGCGCCGGCGCCTCCAGCGTCGTCCTCGTCCTGCTCCTC
GACATCCTCCTCGTCCAAGTCCTCCACCTCGTCGTCGGTCCGGTGCTCGAGCGACTCCGACGGCGG---CGCGGGGGCGG
GGGCGCCGGCGCTGAGGAGGAGCAGCAGCGCGAGCTCGGAGGCCGAGAACCCCATCCAGGGGCTCATCGCCTACTGCAAG
AAGTCCCAGCAGCTGGCGTCGGTGCGGAAGAGCGCCAGCGACGCCGGGTTCCGGTTCCTGTCGTCGTCGGCGGCCTCCAA
GGTCGCCGCCGAGTCCGAGGGCCTGGACGAGCTCATCGAGATCTGCAGCGGATGA-------------------------
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>chr1A_1_TraesCS1A01G287300
TAAATCTAGTGCAAAAAGGGGAGTGATTTGAATCAAATAATGCGACGAATCGGAAGCTATTTGACTAAAACTAATTGAAG
GGATCGAAGGAGCTTACTTTGCCTTCTTCGGGGCCATCTCGATCCGC-AAAAACGGTGAACAAACGACGAAGATCAGAGG
GGGGAGTGGAGGAGATGAGAGAGGGGGCGAGAGGAAGAATTCCTCTGTTCTTAGGGCGGCTGGTTGGGGGGGAGAAGGGG
GAGGGGTGGGGCGTCCCACGGCTTATAACTGCCCTAAAACCCTACCGCCAGGGTCCATGGCGGTAGGGTCGGACAGCCTA
CCGCCAGGACCAGCGGCGGTAGGGTGGGACGGAGACCGTTAATGCTGTTGACGTGGATAAGTATCTTACCGCCGCAGGTT
CTGACGGTAGGCTGTCTAACCCTACCGCCAGAACCACTTGCGGTAGGCTGTCTAACCCTACCGTCAGAACCACTTGCGGT
AGGAAAAAGGATCAGATCCCGAATTTTTTTCCAACAGGGGTCAGATCCTGAATTTCTATGCGAAAAGGGTCAAAACACGA
AATTTAGCCTCGACTGGTACAAGATGGCTAGATGGACTAGGATAGATAGCCCGATAGCCATGCATGTAAAGAAGAGAAGC
GTGGAGGAGCGGAGAGAGGGGCGGGC--GGAAGGCGAAAGCAAAAGAAAAGAGGAGCCCTAATCGAGTAATCAGTCGCTA
GTGGCGGTACTTGTCCGACCGCCAAAGCCGATTTTCCCTCGAGGGAAAAGAGCAACGCAAC-------------GCATGG
ACGTGGAGGGGGGGCAGCACGACACGAATAAAGCCAGAGTCCGAGCAGTGCGTGCTCGCTAGAGCGAGACAGACAGTGAG
CAAACAAAGCACCAG---------------CGGGACGTACGCGCAGGATGCAAACAAGACTCAGATCATGCGGA-----C
AGCAATGGTAGTTTAGCTTGCTGGGTAGCCCCCACCTCCCCCG-----GGACAAAGCTCGGGT-----------ATAAGA
GCGCCCCCGCCCATGGTTGCCACTGCCATTTCTGCCCGTCCGTCCCAGCGAGCGTCGAGAAGCAGCGCAGCGAAGCGAGG
CAAAGACACCAGTGAGGTTACTACA-------------------ACGATGGCGAGCAGGCGAGGGGAGGAGGTCTACGGG
GATGGGATGGAGGAGGAGTACATCGACATGGACCTGAGCCCCCCGGCGGCGGGGAGGGAGTTCGAGTTCCACTTCCACAT
GTCCGCGCCGCTGGACAGGTCGGGGCAGCCGCCGCTGGCGTCCCCGGCCGACGAGCTCTTCTACAAGGGCAAGCTGCTCC
CGCTGCACATGCCGCCGCGTGTCCAGATGGTCGAGGAGCTCCTCCTCGACGGCGCCGTCCGGGGCAGGGCCGGCCCGCGG
CTCGGCGGCCTCGCCGTCAGCACCGCCCCCGCCACGCCCTGCGAGCGCTCCCGCGGCGTGTCGCCGGCCAACTCGTGCTT
CGTCAGCGGGGAGCTCAACGTGGAGGAGTTCTTCCGGGAGTACGCGGCCGGCATGGCTCTCGCCGACGACGACGACGACG
CCGCATCGGCGGCCGGCGGCGAGAAGAAGCCCTGGTCCCGGAGGCTCCGGTTCGTCCGGCAGCTCAACCTCGGCCGCCAG
CTCAAGGCCTCCAAGGCCTACCTCAAGACCATGTTCGCCGGGAAGCAAGCGGGAGCCGGCGGCGACGACAAGCACGGGTT
GGGCGGAAAGGACCTCTCCG------------------GCCATGGCCACCACCCCCGGGCGTGGAGGAAGAACCCGTTCG
GACACATGAGAAGCAACAGGTGCATCACCGAGCAGAGCAGCGGCGGCGGCGGCCGCGCCGGGCACCGGAGGTCCTTCTCC
AGCGTCGTCGTCCGGTACTCGGCGTCCAACAAGACGTCCCCCGCGCCGGCGCCTCCAGCGTCGTCCTCGTCCTGCTCCTC
GACATCCTCCTCGTCCAAGTCCTCCACCTCGTCGTCGGTCCGGTGCTCGAGCGACTCCGACGGCGG---CGCGGGGGCGG
GGGCGCCGGCGCTGAGGAGGAGCAGCAGCGCGAGCTCGGAGGCCGAGAACCCCATCCAGGGGCTCATCGCCTACTGCAAG
AAGTCCCAGCAGCTGGCGTCGGTGCGGAAGAGCGCCAGCGACGCCGGGTTCCGGTTCCTGTCGTCGTCGGCGGCCTCCAA
GGTCGCCGCCGAGTCCGAGGGCCTGGACGAGCTCATCGAGATCTGCAGCGGATGATCGTCGCCCCTGTCGGTGCCGTGAT
GAACGTCGAATGTGTACAATGGTGTCTGAAATGATGCATTCCGGAAATTTTGTGGCGCTGAAACTTGTGTTGGTGTCACG
ATGCTGTTGCTCAAATCAACTGACTCTGAATTACTACACTAAACCACATCTGATT-----------------AGTACGGG
TAGATTCTTTTTCTGACTCTTAAAT---TTTG-CCTTGCAGTA-------TGGTAACCAGTAGACAGTATTTGGTTAGTG
CAAGTGCAAGACAAGAAGCATATGCTGCAGCTTAAAAATA--AGAGAATGAGACCTAAGAGGAGATCACAAAGTCAAGCG
CATAATTTCAT---------------------ATATTTGCAGTCGGCACGTAGCAGTCGTTCCTT----CCCCGGAAGTC
TTACGAGTGTGAAAATGACCTCCATATC-----ATTCCCCACCGCCTGCATTTCTTCAGAGATTACGGACTG--------
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--------------------------------------TAAATTCATCTTAGCGCCGTGGCACGAAGATATGACAGGCCA
AAGCAAAGATCGCGCGCTTTTCACAGAATCATTTGAAGGTACGATCAAAGATACTACTGTACTACTCCTACTAGCAAGAC
ATGAATAT---ACCATCAATCCACCATCATGCAGCTGCAGCCTGACAAGGGCATCATAGGCAGGGCCAAGTGAAGCCTGA
TTCCTCTCTGACACTTTGATTTCATGCCATTAGTTAATCT----------------GGATCCTACGTACATAAGTATACA
CCATGCATGCATGTGCTCGAAAGCAAAACAA-----------TACACTACTAGAGGAGAGCATCTTGTTTCAAGGAGAGG
CCGAGCTCCAGTGGCCGACACACAAAACTTG--------------CTCGACTTAATCCCACTACATGAGTATATGTATTA
GTGGT---------------------------------------------------------------------------
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-----------------------------------------------------------TGCAAATACCAATATCATGCT
CGTGTTTAAAGCTAAGCACAATCAACTAATCAAGGAAACAAGCATGGACAATGGAGGAGGCACGCAGAGCTTTTT-GTTT
CCATCAATGGCTGTCTCGTCCATGTCCGAGCCGCCATGGTAGGCATGCAGGGAAACATGG
>chr1A_1
TAAATCTAGTGCAAAAAGGAGAGTGATTTGAATCAAATAATGCGACAAATCGGAAGCTATTTGACTAAAACTAATTGAAG
GGATCGAAGAAGCTTACTTTGCTTTCTTCGGGGCCATCTCAATCCGC-AAAAACGGTGAACAAACGACGAAGATCGGAGG
GGGGAGTGGAGGAGATGAGAGAGGGGGCGAGAGGAAGAACTCCTCTGTTCTTGGGGCGGCTGGTTGGGGGG-AGAAGGGG
GAGGGGTGGGGCGGCCCATGGCTTATAACTGCCCT-AAACCCTACCGCCAGGGGCCCTGACGGTAGGGTCAGACAGCCTA
CCGCCAGAACCAGCGGCGGTAGGGTGGGACAAAGACCGTTAACGCTGCTGACGTGGATAAGTATCCTACCGCCGCAGGTT
CTGGCGGTAGGCTGTCTAACCCTACCGCCAGAACCC------------------------------------CTGGCGAT
AGGAAAAAGGGCCAGATCCCGAAATTCTTTCCAACAGGGGTCAGATCCTGAATTTCTATGTGAAAAGGGTCAAAACACGA
AATTTGGCC-----------------------------------------------------------------------
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>chr1A_1
TAAATCTTGTGC-AAAAATGGAGTGATTTGAATCAAATAATGCGATGAATCAGAAGCTATTTGACTAAAACTAATTGAAG
GGATCGAAGGAGCTTACTTTGCTTTCTTCGGGGCCATCTTGATACACAAAAAACGGTGAACAAACAACGAAGATCAGAGG
GAGGAGTGGAGGAGATGAGAGAGGGGGCGAGAGGAAGGACTCCTCTGTTCTTGGGGCGGCTGGTTGGGGGG-AGAAGGGG
GAGGGGTGGGGTGGCCCACGGCTTATAACTACCCT-AAACCCTACCGCTAGGGGCCCTGGCGGTAGGGTCGGACAACCTA
CCGCCAGGACCAGCGGCGGTAGGGTGGGACGGAGACCGTTAACGCTGCTGACGTGGATAAGTATCCTACCGCCGCAGGTT
CTGGCGGTAGGCTGTCTAACCCTACCGCCAGAACCC------------------------------------CTGGCGGT
AGGAAAAAGGGCTAGATCTCGAAATTCTTTCCAACAGGGGTCAGATCCTGAATTTCAATGCGAAAAGGGTCAAAACACGA
AATTTGGCCTGGAC------------------------------------------------------------------
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>chr5A_1
TAAAC-TAGTGCAAAAAGGGGAGTGATTTGAATCAAATAATGTGACGAATCGGAAGCTATTTGACTAAAACTAATTGAAG
GGATCGAAGGAGCTTACTTTGCTTCCTTCGGGGCCATCTTGATCCGC-AAAAACGGTGAACAAACGATGAAGATCAGAGG
GGGGAGTGGAGGAGATGAGAGAGGAGGCGAGAGGAAGAACTCCTCTGTTCTTGGGGCGGCTGGTTGGGGG--AGAAGGGG
GAGGGGTGGGGCGGCTCACAGCTTATAACTGCCCT-AAACCCTACCGCCAGGGGCCCTGGCGGTAGGGTCGGACAGCCTA
CCGCCAGGACCAGCGGCGGTAGGGTGGGACGGAGACCGTTAACGCTGCTGACGTGGATAAGTATCCTACCGCTGCAGGTT
CTGACGGTAGGTTGTCTAACCCTACCGCCAGAACCC------------------------------------CTGGCGGC
AGGAAAAAGTATCAGATCCCGAAATTCTTTTCAACAAAGGTCAGATCCTGAATTTCTATGTGAAAAGGGTCAAAACACGA
AATTTAGCCTCCCCTGGT--------------------------------------------------------------
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>chr1D_576
GTACG---------------------------------------------------------------------------
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---------------------AGACGGCTAGATGGAGTAGGATAGATAGCCTGATAGCCATGCATGTAAAGAAGAAAAGC
GTGGAGGAGCGGAGAGAGGGGGGCGGAGGGAAGGCGAAAGCAAAAGAAAAGAGGAGCCCTAATCGAGTAATCAGTCACTG
GTGGCGGTACTTGTCCGACCGCCAAAGCCGATTTTCCCTCGAGGGAAAAGAGCAACGCAAC-------------GCGTGG
A-------GGGGGGCAGCACGACACGGATAAAGCCAGAGACCGAGCAGTGCGTGCTCGGC----CGAGACAGACAGTGAG
CAAACAAAGCACCAGAGCATCGCTGCTTGCCGGGACGTACGCACAGGATGCAAACAAGACTCAGATCATGCGGA-----C
AGCAATGGTAGTTTAGTTTGCTGGGCA---CCCACCTCCCCCG-----GGACAAAGCTCGGGT-----------ATAAGA
GCGCCCCCGCCCATGGTTGCCACTGCCATTTCTGCCCATCCGTCCCAGCGAGCGCCGAGAAGCAGCGGAGTGAAGTGAGG
CGAGGTCACCAGACCACCACCAAGCTTATACAGGGCGAGGGTTGACGATGGCGAGCAGGCGAGGGGAGGAGGCCCACGGG
GACGGGCTGGAGGAGGAGTACATCGACATGGACCTGAGCC---CGGCGGTGGGGAGGGAGTTCGAGTTCCACTTCCACAT
GTCGGCGCCGCTGGACAGGTCGGGGCAGCCGCCGCTGGCGTCGCCGGCCGACGAGCTCTTCTACAAGGGCAAGCTGCTGC
CGCTGCACATGCCGCCGCGCGTCCAGATGGTCGAGGAGCTCCTCCTCGACGGCGCCGTCCGGGGCCGGGCCGGGCCGCGG
CTCGGCGGCCTCGCCGTGAGCACCGCCCCCGCCACGCCCTGCGAGCGCTCCCGCGGCGTGTCGCCGGCCAACTCGTGCTT
CGTGAGCGGGGAGCTCAACGTGGAGGAGTTCTTCCGGGAGTACGCGGCCGGCATGGCTCTCGC---CGACGACGACGACG
CCGCGTCGGCGGCCGGCGGCGAGAGGAAGCCCTGGTCCAGGAGGCTCCGGTTCGTCAGGCAGCTCAACCTCGGCCGCCAG
CTCAAGGCCTCCAAGGCTTACCTCAAGACCATGTTCGCCGGGAAGCAGGCGGGAGCCGGCGGCGACGACAAGAACGGTCT
GGGCGGAAAGGACCTCTCCGGTCACGGACATGGCCATAGCCATGGCCACCACCCCCGGGTGTGGAGGAAGAACCCGTTCG
GCCACATCAGAAGCAACAGGTGCATCACCGAGCAGAGCGGCGGCGGCGGCGGCCGCGCCGGGCACCGGAGGTCCTTCTCC
AGCGTCGTCGTCCGGTACTCCGCGTCGAGCAAGACGTCCCCCGCGCCGGCGCCTCC---GTCGTCGTCGTCGTGCTCATC
GACGTCCTCCTCGTCCAAGTCCTCCACCTCGTCGTCGGTCCGGTGCTCGAGCGACTCCGA---CGG---CGCGGGGACGG
GGGCGCCGGCGCTGAGGAGGAGCAGCAGCGCGAGCTCGGAGGCGGAGAACCCCATCCAGGGGCTCATCGCCTACTGCAAG
AAGTCCCAGCAGCTGGCCTCGGTGCGGAAGAGCGCCAGCGACGCCGGGTTCCGGTTCCTGTCGTCGTCGGCGGCGTCCAA
GGTCGCCGCGGAGTCCGAGGGCCACGACGAGCTCATCGAGATCTGCAGCGGATGATCGTCGCCACTGTCGGTGCCGTGAT
GAACGTTGAATGTGTACAATGGTGTATGAAATGATGCATTCTGGAAATTTTGTGGCGTTGAGACTTGTGCTGGTGTCACG
ATGGTGTTGCTCAAATCAACTGACCCTGAAT-----CACTAAACCACATCTGATT-----------------AGTACGAG
TAGATTCTTTTTCTGACTCTTAATT---TTTCTCCTTGCAGTATGGTAATTGTTAACCACGAAACAACATCTGTTTAGTG
CAAGTGCAAGACAAGAAGCATATGCTGCAGCTTAAAAATA--AGAGAATGAGACCTAAGAAGAGATCACAAAGTCAAGCG
CATAATTTCATCGAGAGATCATATCATA---TATATTTGCAGTCGGCACGTATCAGTCGATCTTAGCGCCCCCAGAAGTC
TTACGAGTGTGAAAATGACCTCCATATATTATTATTCCCCACTGCTTGCATTTCTTCGGAGATTATAGACTG--------
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--------------------------------------TAAATTCATCTTAGCGCCGTGGCACGAAGATATGACAGGCCA
AAGCAAAGATCGCACGCTTTTCACAGAATCATTTGAAGGTACGATCAAAGATACTACT--------ACTACTAGCAAGGC
ATGAATAT---ACCATCAATCCACCATCATGCG------GCCTGACAAGAGCATCATAGGCAGAGCCAAGTGAAGCCTGA
TTCCTCTCTGACACTTTGATTTCATGCCATTAGTTAATCTGGATCCAGGCCACGGTGGATCATACATACATATACAC---
-----CATGCATGTGCGCGAAAGCAAAAAATAATAATAATACTACACTACGAGAGCAGAGTATCTTGTTTCAAGGAGAGG
CCGAGCTCCAGTGGCCGACACACAAAACTTGCAAACTACAAAGGGCTCGATTTAATCCCACTACATCAGCATATGTATTA
GTGGTCGTCTCTACAATATGTGAAGAATTAAGAATATTTACGAAGGTGTGTACATGTTTGGAGGCCATGACGAGGGATAT
TTTTACTTGGTATGGGTGGCAACATGATCTTTGGATTGACCCTCTTACCACTTAGGCGCTAGCAGTCTCCACATGATTAC
TTGTATTTTGCTCTTCTTCTTTTTTGAAACGTGAACTTGATTATGGTTGCGTACATTTTAATTATGCAGAGGCTTGGTGT
AATGCTTAAACCATTTAAGTAATAAAACACCCTTTATAAAAAATATATGTATTAGTGGTTGCCAATACTAACACCATGCT
CGTCTTTAAAGCTAAGCACAATCAACTAATCAAGGGAACAAGCATGGACAATGGAGGAGGCACACGGAGCTTTTTTGTTT
CCATCAATGGCTGTCCCGTCCATGTCCGAGCCGCCATGGTCGG-----------------
>chr1B_602
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------------------------------------------TAGATAGCCCGATAGCCATGCATGTAAAGAAGAGAAGC
GTGGAGGAGCGGAGAGAGGGGG------------CGAAAGCAAAAGAAAAGAGCGGTCCTAATCGAGTAATCAGTCACTA
GTGGCGGTACTTGTCCGACCGCCAAAGCCGATTTTCCCTCGAGGGAAAAGAGCAAGGGAAAAGAGCAATGCAATGCGTGG
A-------GGGGGGCAGCACGACACGGATAAAGCCAGAGACCGAGCACG--------------------CAGACAGTGAG
CAAACAAAGCACCAG----------------GGGACGTACGTGCAGGATGCAAACAAGACTCGGATCATGCGGACGGACC
AGCAATGCTAGTTTAGTTTGCTGGGTAGGTAGCCCCCACAACCAGGGCGGGCAAAGCTCGGGTCCGTCTTCGGTATAAGA
GCGCCCCCACCCATGGATGCCACTGCCATTTCTGCCCGTCC----CAGCCAGTGTCGAGA-GCAGCGGAGCG-AGTGAGG
CACAGCGACCACAGAGCTTACCA----------GGCGAGGGCTGACGATGGCGAGCAGGCGAGGGGAGGAGGTCTATGGG
GACGGGCTGGAGGAGGAGTACATCAACATGGACCTGAGCC---CCGCGGCGGGGAGGGAGTTCGAGTTCCACTTCCACAT
GTCCGCGCCGCTGGACAGGTCGGGCCAGCCGCCGCTCGCGTCCCCGGCCGACGAGCTCTTCTACAAGGGCAAGCTGCTGC
CGCTGCACATGCCGCCGCGCGTCCAGATGGTCGAGGAGCTCCTCCTCGACGGCG---TCCGGGCCAGGGCCGGGCCGCGT
CTCGGCGGCCTCGCCGTCAGCACCGCCCCCGCCACGCCGTGCGAGCGCTCCCGCGGCGTCTCGCCGGCCAACTCGTGCTT
TGTCAGCGGGGAGCTCAACGTGGAGGAGTTCTTCCGGGAGTACGCGGCCGGCATGGCTCTCGC---CGACGACGACGACG
CCGCGTCGGCGGCCGGCGGCGAGAAGAAGCCCTGGTCCAGGAGGCTCCGGTTCGTCAGGCAGCTCAACCTCGGCCGCCAG
CTCAAGGCCTCCAAGGCTTACCTCAAGACCATGTTCGCCGGGAAGCAAGCCGGAACCGGCGGCGACGACAAGCACGGTTT
GGGTGGAAAGGATCTCTCCGGC------CATGGCTACGGACATGGCCACCACCCCCGGGCGTGGAGGAAGAACCCGTTCG
GACACATCAGAAGCAACAGGTGCATCACCGAGCAGAGCGGCGGCGGCGGCCGCCGCGCCGGGCACCGGAGGTCCTTCTCC
AGCGTCGTCGTCCGGTACTCGGCGTCCAACAAGACGTCCCCCACGCCGGCGCCCCC---GTCATCCTCGTCGTGCTCCTC
GACGTCCTCCTCGTCCAAGTCCTCCACCTCGTCGTCGGTCCGGTGCTCGAGCGACTCCGA---CGGTGGCGCGGGGGCGG
GGGCGCCGACGCTGAGGAGGAGCAGCAGCGCGAGCTCGGAGGCGGAGAACCCCATCCAGGGGCTCATCGCCTACTGCAAG
AAGTCCCAGCAGCTGGCCTCGGTGCGGAAGAGCGCCAGCGACGCCGGGTTCCGGTTCCTGTCGTCGTCGGCGGCGTCCAA
GGTCGCCGCGGAGTCCGAGGGCCTCGACGAGCTCATCGAGATCTGCAGGGTGTGATCGACCGATCCGTCGGTGCTGTCAT
GAACGTCGAATGTGTACAATGGTGTATGAAATGATGCATTCTGGAAATTTTGTGGTACTCAAACTTGTGTTGGTGTCACG
ATGGTGTTGCTCAAATCAACTGACTCTGAAT-----TACTAAACCACATCTGATTAGTACAGGCATGAGTACAGTACGAG
TAGATTCTTTCTCTGACTCTTAACTAAATTTG-TCTTGCAGTA-------TGGTAACCACTAAACAACATCTAATTAGTG
CAAGTGCAAGACAAGAAGCATATGCTGCAGCTTAAAAAAAAGAGAGAATGAGACCTGAGAAGAGATCACAAAGTCGAGCA
CACAATTTCATCGAGAGATCATATCATAGTATATATTTGCAGTCGGCACGTATCAGTCGATCCTT----CCCAAGAAGTC
TTACGAGTGTGAAAATGACCTCCGTAT-----TATTCCCCACCGCTTGCATTTCTTGAGAGACTATAGACTGTAAGGCCA
ACTCCACCGCGCGACCCTATCCTGTCCGGCTTCGTCCGTTTGGGGTAAAAGGAACAAAAGAGATGGTCCAGCGCACGGCC
TCAAACGGACAATTGTCCGGATTCCGTCCGTTTTCGACCCATCCCCGACGCAGGTTGGCTCGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCGCCTGTCGGGGACACTAGCAGTCCCTCCGCTCCCAACGTTT
CACCCTCTCTCCCCGCCCCGCCCCGCCGTCGGTGCCGCCGCTATTCTCCGGCCGCCTCCTCACCGCGCAGCCCCCCGCCG
TCCATACCAAACCACGTCTCGACATGGCCGCCACCACGCCCGCGCTTTCGCCGTAGTTTTGGTCGTCTATCGGGGGAGGT
TTGGCCGTCGCCGTCCTTGCCGATGGCGGAGGGGACACGAGTGCCGGCGACGTACCACGGCGGCCGAGGCAGATTCCGAC
GAGAGCTCCAGAGCGGCCAGTAGCCGGCCGGCAACCACCCCTGCTGCGTCGAGGTGATCATCGCGGCCTCTTCGCCACCA
CGACCGCAAGGTGTTCGACCTTTTGCCAACAAAGGTATGGACAGTGGAGACTAGTTTTTCTTCCATCATTTCCTCTGTTC
ATCGGACGATTCGTCGTCGGATGATGAAGATCTTGTGGTGGCTGCACTGGTCGTTCACGACCATATTCAACGGCAGCTTC
CTCGGTACAGGGGGTCACTCCCTGGCCGTGCTCCCAACCTGAACCGCAACAAGGAGAGAGGCCACGCCTTGCTCTATGCC
GATTACTTTGCCAACACCCCACTCTTCAAGCCGGATAAATTTCGTCGCCGTTTTCGTATGGCAAGGCATGTGTTCAATCG
TATCCAAGAGGGAGTGGTTGCTCATGACCCATACTTCGAGTGCAAGATGGATGCCCTTGGAAAGTTTGGATTCTCCTCTT
ACCAGAAATGCACCGCGGCCATCCGCATGCTTGCATATGGAATTCCAGGCGATCTGGTGGATGAGTATGTGCGTATGAGT
GAGACAACATGTCTGATGTCAATGTACAAGTTTTGCCAGGCTGTGATCGAGATGTTTGGCCCAGAGTACTTGAGGCAGCC
AATTGCCGCTGATACAAAGAGATTGTTGGCGACCAACGCAGCTAGAGGCTTTCCAGGCATGCTTGGCAGCATAGATTGTA
TGCATTGGGAGTGGAAGAACTGTCCATTTGCTTGGCAGGGCCAGTACAAGGGGCATGTTAACGGGTGCACTGTCATATTA
GAAGCGGTGGCATCGCAAGATCTTTGGGTATGGCATTCTTTCTTCGACATGGCAGGTTCTCACAATGATATCAACGTGCT
GCAGCGTTCTCCAATCTTCGCGAGGCTTGCAGAAGGCCACTCCCCACCTGTCAACTTTGAGATCAACGGCCACCATTACA
ACAAGGGATACTATCTAGCAGATGGTATATATCCTCAGTGGTCAACTTTTGTGAAGGCAATCTCGAAACCCCAATGTGAG
AAAAGAAAGAGATTTGCCCAAATGCAAGAGAGTGTTAGAAAGGATGTGGAACGTGTTTTTGGTGTGCTTCAATCCCGGTG
GGGTATCGTTCGAAACCCTTCACTGTCATGGGATGAAATGAAGCTTTGGGAGGTGATGACTGCTTGTGTGATCATGCACA
ACATGATCGTCGAGGACGAGCGTGATGAGAGTATCTTCGACAAAGGATTTGAGTATCAAGGTGAAAATATTGAGCCCCTG
CACCAAGACCCGGCCACATTTGAACAGTTTGCCCAATCCACCGTGAGATGCGTGATTGGCACACTCATTTGAATCTTCAA
AATGACTTGGTTGAGCACGTCTGGGATCACATTGGCAACCAATAGATGTAAAACTACTTTATGTTCAGTCAAGACAATTT
CGATTTGATTGTAAAACTATTTTATTAAAGACAATTTCAATTGGGTTGTAAAACTATTTTAATTTTCAGACAAATATTTG
GGTTGGAAACTAGTTTTGATGCAAATTAGGGCATTTTTGGCCCTGGCGGACAGGATGGGGCAAATGGATGCGGCCGCGCG
CTGGGTGCACGGCCACCGCATTCCAGGACAGGCCCGGACACGACCCCAAATCCATACCCAAACAGACAGAAACCGGACAA
AACGGACGTCCGTTTGGGGTCGCGCGGTGGAGTTGGCCTAAATTCATCTCAGCGCCGTGGCACGAAGATACGACAGGCCA
AAGCAAAGATCGCGCGCTCTTCACAGAATCATTTGAAGGTACGACCAAAGATACTACT-----ACTACTACTAGCAACGC
ATGAATATACCACCATCAATCCACCATCATGCAA------CCTGACAAGAGCATCATAGGCAGAGCCAAGTGAAGCCTGA
TTCCTCTCTGACACTTTGATTTCATGCCATTAGTTAATCTGGATCTAGGCCACGGTGGATCATACGTACATAAGTATACA
CCATGCATGCATGTGCGCGAAAGCAAAAAAA-----------TACACTACGAGAGCAGAGTATCTTGTTTCAAGGAGAGG
CCGAGCTCCAGTGGCCGACACACAAAAATTGCAACCTACAAAGGGCTGGATTTAATCCCACTGACTACATCAG-------
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-------------------------------------------TATATGTATTAGTGGTTGCCAATACCAACACCATGCA
CGTCGTTAAAGCTAAGCACAATCAACTAATCAAGGAAATTAACAAGCAT-------GAGGCACGCAGAGCTTTTT-GTTT
CCATCAATGGCTGTCTCGTCCATGTCCGAGCCGCCATGGTAGGCATGCAGGGAAACATGG
>SNPs
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----------------------S---------------------------------------------------------
---------------------------------------S------------S------------------S--------
-------------S---------------------S-----------------S--S-----------------------
------------------------------------------S----S-----------------S--------------
-----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----
-----------------------S--S-----------------------------------------------------
------------------SSS---S-----------S-------------------------------------------
---------------------S-S-S--------------------------------------------------S---
----------------------------------------------------------------------------S---
-SSSSSSS------------------S------------S------------------SSSSSS----------------
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----------------------------------------------------------SSSSS---S-----------S-
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---S----------------------------------------------------------------------------
------------------------------------------------------------
>forward_464
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AGGCTGTCTAACCCTACCGT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>reverse_2362
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------CGGAAATTTTGTGGCGCTGA-------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------
