>input_sequence_57560
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------------------------------------------------------------------------------AT
GCCGTCGCCGATCCTACCGGCCAAGGAGGTGGAGGAGGTGGTCACCGCCAACGAAGAGGTGACAGATATCATAGTCCAGA
GGGTGCCGTACTGGGACCCTCCGACGGTCCGGGCGCTGGACACGAGCGAGCTGACCACCTGGTCTCTCTACCGCGCCCTC
ATCGGCGAGTTCACGGCCTCCCTCATCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACCGGAACCAGTCCTCCGG
CGCCGACGAGCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACT
CCACCAGCGGCGTCTCAGGCACGCACGCACGCATACACA----------------------TC----------------T
CCGCA-ACAACATACATACAGGTATGCGCAAGTTGTTGCGGCGATTAATT---ATCATCGCCTCCCGT----G-------
-A----TGCAGGTGGGCACATAAACCCGGCAGTGACGTTCGCGCTGTTCATCGCCGGGAAGGTGACGCTGGTGCGCTCGG
TGCTGTACGTGGCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTGAAGGGGATCATGAAGCACCCCTACGAC
GACTTCGGCGGCGGCGCCAACGCGGTGGCCGGGGGGTACTCTCTCGGGGCGGCCCTCGGCGCGGAGATCTTCGGCACCTT
CGTCCTCGCCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTACGTCCATCGC
------TCTCCTTCTCCTCTC----------------------AGCTAGCTCGCCGTGATCACGGCCGGCG---------
------GCATCTGTCGAACCTGCATATATGATTTGTC----GTTAAT----TGCAGCTGGTGGCGGCGCTACCGATCGGT
TTGTCGGTGTTCGTGGTGCACCTGGCGACCATCCCGATCACCGGCACCGGCATCAACCCGGCCAGGAGCCTGGGCGCCGC
CGTCCTGTACAACCAGCACAAAACCTGGAAGCAACACGTACGTGAGATCCAT------TGTATTTAAATCGTACTGTATA
CAATTCCTGTAGCCATTGATTTTGTTGGAATGAGATTGAAGTGCTCCATTGATCTGC----TGCAGTGGATCTTCTGGGT
CGGGCCCTTCACCGGCGCGGCCTTAGCGGCGTTCTACCACAAGATCGTGCTGCGCGACGAGGCTGTAGTGAAGGAGTCGC
TAGAAAAGCTGGGCTCGTTCAAGAGGAGCGGCTCGACCGCTTGA------------------------------------
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>chr7B_1_TraesCS7B01G096000
TGTTTATGTATTCATACATGTATTTAAGTTTTCGATCAATTCAATTCTAGCATTAATAATAAACTTTTATCATGGATAAG
AAAATATAAAATAACAACTTTATTATTGTCTCTAGGGCATATTTCCTTCACAAGCGGGCCCTGCTGGGCCGCCGTGCGAC
AGACCTCGCTCGTCGGGGCGACGGCCACCACCCAATGAGGGTGGCCCCGGGCGCGCGCCCGCGGTCCACCTATCATGGAC
CGTTTGGGTCCGAGTAGATCAAACATCTTGAAACTCTGAGTAGCCCCCGCGGCACGCCAGCCAAAAACGGACGGTACGCG
ACCGGACCAACCCGACGCGGGGTGTACACATCGACAGGCGGGGCCAGCTGGACCGTCGCGCGTGGGACAATGCAGTAGAC
CCTATTCGCGGGCGTGATGGCCATCTCCTAATGACGGTAGCCCCGAACGTGCCCTCGTAGTCCACCCGTCATGGACCGCT
CGGCCGGGTCGCCCGGGTCCGAGCTGTCCTGGCAGATCGGACGACTCGGAGCCGCCCCGCGGTAATGGACGCCCATGAGG
CTCTCTTCATCCGCTTAGGGGGAGTAATGTCTGTGTGAATCGCTAGATGCAGAGGCCGGGCTTGCTCTGCCTTTTTCTTT
TTAAAAAAAGTGCAAAATGTGAGGTCTCAAATTGGGGACCGGACGACAAGGTGTTTAGTGAT-TGTAAAAAATAAACAAA
GAGAAATAAATCGAGCGATGTACCATTGGACATTGGGTGGAGATCCGGTCGACATAATTGGTAACTGGA--ATAACAATC
TGGTCACCTGTGCAGTAGAAGCTCACGGACACGTAG---TGGATTCCAAGGAGAGAACCTCCTCCAAGT-----------
ATCTAAGCACAGTCTCCCTCACGCA----GCTGTGCAAA--CACTTCACCACGAC---CCCTATTTAAGCTTCCTCTCAT
GGCGTGGACAAT-CCTA--------GAACCAAGCTAGATAA-AA-TCCTCTGCCTTGCCTTGGAG-CTCAACTCGACCAT
GCCGTCGCCGATCCTACCGGCCAAGGAGGTGGAGGAGGTGGTCACCGCCAACGAAGAGGTGACAGATATCATAGTCCAGA
GGGTGCCGTACTGGGACCCTCCGACGGTCCGGGCGCTGGACACGAGCGAGCTGACCACCTGGTCTCTCTACCGCGCCCTC
ATCGGCGAGTTCACGGCCTCCCTCATCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACCGGAACCAGTCCTCCGG
CGCCGACGAGCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACT
CCACCAGCGGCGTCTCAGGCACGCACGCACGCATACACA----------------------TC----------------T
CCGCA-ACAACATACATACAGGTATGCGCAAGTTGTTGCGGCGATTAATT---ATCATCGCCTCCCGT----G-------
-A----TGCAGGTGGGCACATAAACCCGGCAGTGACGTTCGCGCTGTTCATCGCCGGGAAGGTGACGCTGGTGCGCTCGG
TGCTGTACGTGGCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTGAAGGGGATCATGAAGCACCCCTACGAC
GACTTCGGCGGCGGCGCCAACGCGGTGGCCGGGGGGTACTCTCTCGGGGCGGCCCTCGGCGCGGAGATCTTCGGCACCTT
CGTCCTCGCCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTACGTCCATCGC
------TCTCCTTCTCCTCTC----------------------AGCTAGCTCGCCGTGATCACGGCCGGCG---------
------GCATCTGTCGAACCTGCATATATGATTTGTC----GTTAAT----TGCAGCTGGTGGCGGCGCTACCGATCGGT
TTGTCGGTGTTCGTGGTGCACCTGGCGACCATCCCGATCACCGGCACCGGCATCAACCCGGCCAGGAGCCTGGGCGCCGC
CGTCCTGTACAACCAGCACAAAACCTGGAAGCAACACGTACGTGAGATCCAT------TGTATTTAAATCGTACTGTATA
CAATTCCTGTAGCCATTGATTTTGTTGGAATGAGATTGAAGTGCTCCATTGATCTGC----TGCAGTGGATCTTCTGGGT
CGGGCCCTTCACCGGCGCGGCCTTAGCGGCGTTCTACCACAAGATCGTGCTGCGCGACGAGGCTGTAGTGAAGGAGTCGC
TAGAAAAGCTGGGCTCGTTCAAGAGGAGCGGCTCGACCGCTTGAAGATCGAGGAGAGGAGACCATGCGCCACGCATGCAT
ATACAGTACAGTATTTTTCATCGGGGTAATGAGGATCGAAAATGTTGGTGGTTGGTTTTTACTG------CTTCTCTCGG
CACTGTAATGTACGGAATCTTGCTCT-AGTATCGTTGGTTAATTAAGCGTGTCTTTTTTTTTTGAGGTGTAATTAAGCGT
GTCTTGAGACTCTTGACGTGCGCCGTTCGTCATGATGCTTATCAACTGGTCCATTCGGAACGAGCGAAATGCCCAGATTT
TTCGGAAGAAATCAATGCCACCTCCAATCATCGTTGCAAACATCAAGAGTGATGCTGATCTTTGGGAAATCACGGGAGCT
AAAATTTTGAGTGATATCTTACCGGGGTCCGGGGGAGTAGTCCCCGTTCATAAT--ATTTGGTTCTTTCTTCACTTCAAA
ACATTGTCGCACTATCCTTAATTAATAGACGAGACAGAAAACTTGTCTTCATTTCACAAATAAATAAATAACACAAGATT
CGTGCAAATTTTTATTTTTTTATTTTTTAGAAAAGGAGGATGACCCCCGGCCTCTGCATCTGGGAGATGCATACGGCCAC
TTTATTGATTATTCTCGAGGACCTTACAAAGTATTACAACAATGAGCCTGAATCCACCATCTTGGCAACACATGCCGCTA
CTCTTATCCAAAATGATGAAGGGGTGCTAGCTGGGCCACTACCCAAACCACTCACCTAAGCCTAACATCAAAAAGCCGGA
AACCGAAACATATTCGGAAGCCCCAGCCGAGCCACATACCGGGTCTGGGGCACAATCCGGTCAGACGCACTCGTGTGTCG
TCGCCACCATCTTCCACAGGTCCGTCTTCAGATCATAGTGAGGCTTCTACCTTGTCTGGCCACTCTGCCATCGACGTCAC
CATGACGCCAGACAGCAACCTCCTCCTGCGCGAGTCCATCTCCGCGCATCGGGCGGCGAGCCTCAACAGCGCCATGCCGC
CGATCTTCACCGC
>chr7A_607
ATGTCA--------------------------------------------------------------------------
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---------------------------------------------------GAGGCTGGTCTTGCTCCG-CTTTTTTTTT
TTAAAGGAGGGGCAAAATGTGAGATCTGAAACTGGGGACCAGACGACCAGGTATTTAGTGATGTGTCAAAAATAAACAAA
GAGAAATAAATCGAGCGATGTATG---GGACATTGGATGGAGATCCGGTCGACGTAATTGGTAACTGGAACATAGCAATC
TGGTCACCTGTACAGTAGAAGCTCACGGACACGTAG---TGGATTCCAAGCAGAGAACCTCCTCCAAGT-----------
ATCCAAGCACAGTCTCCCTCACGCA----GCTGTGCAAA--CACTTCACCGCGAC---CCCTATTTAAGCTTGCTCTCAT
GGCGTGGACAATTCGTAGCACCCAGGAACCAAGCTAGATAAGAA-TCCTCTGCCCTGCCTTGGAGGCTCGACTCGACCAT
GCCGTCGCCGATCCTGCCGGCCAAGGAGGTGGAGGAGGTGGTCACCGCCAACGAAGAGGTGACAGACATCATCGTCCAGA
GGGTGCCCTACTGGGACCCTCCGACGGTCCGGGCGCTGGACACGAGCGAGCTGACCACCTGGTCCCTCTACCGCGCCCTC
ATCGGCGAGTTCACCGCCTCCCTCATCCTCCTCTACGTCAGCATCGCCACCGTCATCGGGTACCGGAACCAGTCCTCCGC
CGCCGACGAGCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACT
CCACCAGCGGCGTCTCAGGCACGCACGCATACACATCTCC----------------------------------------
--CGTGACCACATACATACAGGTACGCGCAAGTTGTTGCGGCGATTAATT---ATCATCGCCTCCCGTGATCG-------
-A----TGCAGGTGGGCACATAAACCCGGCGGTGACGTTCGCGCTGTTCATCGCCGGGAAGGTGACGCTGGTGCGCTCGG
TGCTGTACGTGGCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTGAAGGGGATCATGAAGCACCCCTACGAC
GACTTCGGCGGCGGCGCCAACGCGGTGGCCGGGGGCTACTCGCTCGGCGCGGCCCTCGGCGCGGAGATCTTCGGCACCTT
CGTCCTCGCCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTACGTCCATCGC
GCGCCTTCTCCTTCTCCTCTC----------------------AGCTAGCTCGCCGTGATCACGGCCGGC----------
-----------TG--------------ATGATCTGTC----ATTAAT----CGCAGCTGGTGGCGGCGCTGCCGATCGGG
CTGGCGGTGTTCGTGGTGCACCTGGCGACCATCCCGATCACCGGCACGGGCATCAACCCGGCGAGGAGCCTGGGCGCCGC
CGTGCTGTACAACCAGCACAAGACCTGGAAGCAGCACGTACGTGAGATCCATGCACCATGTATTTAAATCGCACTGTATA
CAATTCCTGTAGCCATTGCTTTTGCTCCAATGAGATTGAAGTGCTCCGTTGATCTGCC----GCAGTGGATCTTCTGGGT
CGGGCCCTTCACCGGCGCGGCCCTGGCGGCGTTCTACCACAAGATCGTGCTGCGCGACGAGGCGGTGGTGAAGGAGTCGC
TAGAAAAGCTGGGCTCGCTCAAGAGGAGCGGCTCGACCGCTTGAAGGTCGGGGAGAGGAGACCATGCGCCACGCATGCAT
GCATA-TACAGTATTTTTCATCGGTGTAAAGAGGATCGAAAA-GTTGTTGGTTGGTTTCTAGTCTTTTTACTTCTCTCGG
CCCTGTAATGTACGGAATCTTGCTCTTAGTGTCGTTGGATAATTATAAGCGTG---------------------------
----------TCTTGATGTGCGCCGTTCGTCATGATGCTTATCAATTGGTCCATTTGGAACGAGCGAAATGCCCAGATTT
TCCGGAAGAAATCAATGCCACCTCCAATCATCGTTGAAAACATCAAGAGTGATGCTGATCTTTGGAAAATCACGGGAGCT
AAACATTTGAGTGATATCTTACCGGG-------GGACTAGTCCCCTTTCATAATAAATTTGGTTCTTTTTTCGCTTCAAA
ACATTGTCTTGCTATCCTTAATTAATAGACGAGCCAAAAAACTTGTCTTCATTTCACAAATAAATAAAT-----------
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>chr4B_801
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---TCACCTGTCGAGTAGAAGCTCTTGGACATGTAGGAGTAGATTCCAAGGAGAAAACCTCCTCCAACTCCAAGTATCTA
ATCCAAGCAGAGTCTCCTTCACGCATGCAGCTTCGCAAG--CACTTGACCACGATCATCCCTATTTAAGCTTGCACTCTT
GGAGTGGATACT-CCTATCACCAGACTGCCATTGCCATACACACACAGCTGGTTCCAACCAAG-----CCGAC-------
--------CGACCATGGCGGCCAAGGAGGTGGAGAAGGTGGTCACCGCCGACGAAGAGACAACGGACATCGTCGTCCATA
GGGTGCCGTACGGGGACCCGCCGGCGGTCCGGGCGCTGGACACGAGCGAGCTGACCACGTGGTCCCTGTACCGCGCCCTC
ATCGGCGAGTTCACGGCCTCCCTCGTCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACAGGAGCCAGTCCTCCGC
CCCCGATGACCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCTTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACT
CCACTAGCGGCATCTCAGGTAGATATATACACATCTCTATCACAACATACAATATTTTCTCCG----------------T
CCGTA-ATTACTTGTCGTAGAAATGGATAGAAATGGGTGTGTATCTAGAACCAATGGTCGCCTTGCGT----G----TGC
AA----TGCAGGCGGGCACATAAACCCGGCGGTGACGTTCGCGCTCTTCATGGCCGGGAAGGTGACGCTGGTGCGCTCGG
TGCTGTACGTGGCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTCAAGGGGATCATGAAGCACCCCTACGAC
GACCTGGGGGGCGGCGCCAACGCGGTGGCCGGGGGGTACTCGCTCGGGGCGGCCCTTGGCGCCGAGACCTTGGGCACCTT
CGTCCTCGCCTACGCCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTAC----CAGAC
G--------CCTTCTCCTCTCACTCTC------------AGCTAGCTAGCTCGTGGTGATCGCCGCCGGACCTGTACA--
-------TATATG--------------ATGATTTGTCGTCAATTAAT----TGCAGCTGGTGGCGGCGCTCCCGATCGGC
ATGGCGGTGTTCGTGGTGCACCTGGCGACCATCCCGATCACCGGCACGGGCATCAACCCGGCGAGGAGCCTGGGTGCCGC
CGTCCTGTACAACCAGCACAAAACCTGGAAGCAACACGTACGTG------------------------------------
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>chr1D_801
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---TCACCTGTGCAGTAGAAGCTCTTGGACATGTAG---TAGATTCCAAGGAGAAAACCTCCTCCAACTCCAAATATCTA
ATCCAAGCAGAGTCTCCCTCACGCATGCAGCTTTGCAAGCAA--TTGACCACGATCATACCTATTTAAGCTTGCACTCTT
GGTGTGGATACT-CCTATCACCAGACTGCCATTGCCATACACACAC-----GTTCCAACCAAG-----CCGGCTGACCAT
GTCGACGACGATCATAGCAGCCAAGGAGGTGGAGAAGGTGGTCACCGCCGACGAAGAGATAACAGATATCATCGTCCAGA
GGGTGCCGTACTCGGACCCACCGGCGATCCGGACTCTGGACACGAGCGAGCTGACCACGTGGTCCCTGTACTGCGCCCTC
ATCGGCGAGTTCACGGCCTCTCTCGTCCTCCTCTACGTGGAA---GCCACCGTCGTCGGGTACAGGAACCAGTCCTCCGC
CGCCGATGAGCGATGCACCGGCGTCAGCTACCTCGGCGTCGCCTGCTCCTTCGGTGCCACCGTCTCCGTCCTCGTCTACT
CTACCAGCGGCGTCTCAG--------------------------------------------------------------
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>chr1B_802
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----CACCTTAGCCGTAGAAGCTCTTGGACATGTAG---TAGATTCCAAGGAGAAAACCTCCTCCAACTCCAAGTATCTA
ATCCAAGCAGAGTCTCCCTCACGCATGCAGCTTTGCAAGCACACTTGACCACGATCATACCTATTTAAGCTTGCACTCTT
GGTGTGGATACT-CCTATTACCAGACTGCCATTGCCATACACACAC-----GTTCCAACCAAG-----CGGCCTGACCAT
GTCGACGACGATCATAGCGGCCAAGGAGGTGGAGAAGGTGATCACCGCCGATGTAGAGATAACAGAAATCATCGTCCAGA
GGGTGCCATACTCGGACCTGCTGGCAGTCCGGGCACTGGACA-------------------------GTACCGCGCCCTC
ATCGGCGAGTTCACGGCCTCTCTCATCCTCCTCTACGTGAGCATCACCACCGTCGTCAGGTACAGGAACCAGTCCTCCGC
CACCGA---GCGGTGCACCGGCGTCAGCTACCTAGGCGTCGCCTGGTCCTTCGGTGCCACCGTCTCCGTCCTCATTTACT
CTACCAGCGGCGTCTCAGG-------------------------------------------------------------
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>chr7D_826
ACC-----------------------------------------------------------------------------
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-------------------------------CGTAG---TGGATTCCAAGCAGAGAACCTCCTCCAAGT-----------
ATCCAAGCACAGTCTCCCTCACGCA----GCTGTGCAAA--CACTTCACCGCGAT---CCCTATTTAAGCTTCCTCTCAT
GGCGTGGGCAGT-CGTAGCACCCAGGAACCAAGCTAGATAA-AAATCCTCTGCCTAGCCTTGGAGGCTCAACTCGACCAT
GCCGTCGCCGATCCTGCCGGCCAAGGAGGTGGAGGAGGTGGTCACCGCCAACGAAGAGGTGACAGACATCATCGTCCAGA
GGGTGCCGTACTGGGACCCTCCGACGGTCCGGGCGCTGGACACGAGCGAGCTGACCACCTGGTCCCTCTACCGCGCCCTC
ATCGGCGAGTTCACCGCCTCCCTCATCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACCGGAACCAGTCCTCCGC
CGCCGACGAGCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACT
CCACCAGCGGCGTCTCAGGCACGCACGCATGCATACACA----------------------TC----------------T
CCCGTGACCACATACATACAGGTGTGCGCAAGTTGTTGCGGCGATTAATT---ATCATCGCCTCCCGT----G-------
-ATGTGTGCAGGTGGGCACATAAACCCGGCAGTGACGTTCGCGCTGTTCATCGCCGGGAAGGTGACGCTGGTGCGCTCGG
TGCTGTACGTGGCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTGAAGGGGATCATGAAGCACCCCTACGAC
GACTTCGGCGGCGGCGCCAACGCGGTGGCCGGGGGGTACTCGCTCCGGGCGGCCCTCGGCGCGGAGATCTTCGGCACCTT
CGTCCTCGCCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTACGTCGATCGC
GCGCCTTCTCCTTCTCCTCTC----------------------AGCTAGCTCGCCGTGATCACGGCCGGCG---------
------GCATCTG--------------ATGATCTGTC----GCTAAT----TGCAGCTGGTGGCGGCTCTCCCAATCGGT
TTGGCGGTGTTCGTGGTGCACCTGGCGACCATCCCGATCACCGGCACGGGCATCAACCCGGCGAGGAGCCTGGGCGCCGC
CGTGCTGTACAACCAGCACAAAACCTGGAAGCAACACGTACGTGCGATCCATGCACCATGTATTTAAATCGTACTGTATA
CAATTCCTGTAGCCATTGATTTTGTTGGAATGAGATTGAAGTGCTCCATTGATCTGC----TGCAGTGGATCTTCTGGGT
CGGGCCCTTCACCGGCGCGGCCCTGGCGGCGTTCTACCACAAGATCGTGCTGCGCGACGAGGCTGTGGTGAAGGAGTCGC
TAGAAAAGCTGGGCTCGCTCAAGAGGAGCGGCTCGACCGCTTGAAGGTCGA-GAGAGGTGACCATGCGCAC-----GCAT
GCATA-TACAGTATTTTTCATCGGTGTAAAGAGGATCGAGAA-GTTGTTGGTTGGTTTTTAGTCTTTTTACTTCTCTCGG
CCCTGTAATGTACGGAATCTTGCTCT-AGTGTCGTTGGTTAATTAAGCGTGTCTT-------------------------
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>chr4A_996
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-------------------------------------------------------------------------CGACCAT
GCCGCAGACGACCATAGCGGCCAAGGAGGTGGAGAAGGTGGTCACCGCCGACGAAGAGACAACAGATATCGTCGTCCATA
GGGTGCCGTACGGGGACCCGCCAGCGGTCCGGGCGCTGGACACGAGCGAGCTTGGCACGTGGTCCCTGTACCGCGCCCTC
ATCGGCGAGTTCACGGCCTCCCTCATCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACAGGAACCAGTCCTCCGC
CGCCGACGAGCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACT
CCACCAGCGGCGTCTCAGGTTGGTATATACACATCTCTATCACACC-----ATATTTTCTCCG----------------C
CCATA-ATTACTTGTCATAGAAATGGATAGAAATGA--GTGTATCTAGAACTAATTGTCGTCTTTCAT----GTGCATGC
AA----TGCAGGTGGGCACATAAACCCGGCGGTGACGTTCGCGCTCTTCATGGCCGGGAAGGTGACGCTGGTGCGCGCGG
TGCTGTACGTGGCGGCGCAGTGCCTCGGCGCCGTCGTTGGCGTGGGCGTCGTCAAGGGGATCATGAAGCACCCCTACGAC
GACCTGGGGGGCGGCGCCAACGCGGTGGCCGGGGGGTACTCGCTCGGGGCGGCCCTTGGCGCGGAGACCTTGGGCACCTT
CGTCCTCGCCTACGCCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTACGTACCAGAC
G--------CCTTCTCCTCTCACTCACTCACTCTCAGCTAGCTAGCTAGCTCGTGGTGATCACGGCCGGAAGTGCCTATA
TACTATGTATATG--------------ATGGTTTGTCGTCGATTAACTGCGTGCAGCTGGTGGCGGCGCTCCCGATCGGC
ATGGCGGTGTTCGTGGTGCACCTGGCCACCATCCCGATCACCGGCACGGGCATCAACCCGGCGAGGAGCCTGGGCGCCGC
CGTGCTGTACAACCAGCACGAAACCTGGAAGCAACACGTACGTACGTGGGACCCATTAATTGCTGTTGTTAGAAAA----
---------------------TTAATGAGATTAAAATAAAGTGTCCCGTTGATGATCTGCATGCAGTGGATCTTCTGGGT
CGGGCCTTTCACCGGCGCGGCCATGGCGGCGTTCTACCACAAGATCGTGCTGCGCGACGGGGCTGTGGTGAAGGAGTCGC
TGGCGGCGATGGGCTCCTTCAAGAGGAACAGCTCCACCGCTTGAAGATCGA-----------------------------
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>chr5D_1080
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-----------------------------------------------------------------------------AGA
AGGCGCCCTACTGGGACCCGCCGCCGGCCCCGCTGCTGGACACGAGCGAGCTGACCCGGTGGTCGCTGTACCGCGCGGTC
ATCGCCGAGTTCGTGGCCACGCTCATCTTCCTCTACGTCAGCCTCGCCACCGTCATCGGCTACAAGAGCCAGTCCGCCGC
CC------AGCCGGGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGGCCTTCGGCGCCACCATCTTCGTCCTCGTCTACT
GCACCGGCGGCGTCTCAGGCACGCACGCACGCACGCACA----------------------TATGCATACGTCCATCTCC
CTAGA-ACAACTTAACCCACACATGGATACGATTCGATACGTGAACTGTCGAGTGTA--CTGC-----------------
------TGCAGGTGGCCACATCAACCCGGCGGTGACGTTCGGGCTGTTCGTGGGGAGGAAGCTGTCGCTGGTGCGCACGG
TGCTGTACATCGTGGCGCAGTGCCTCGGCGCCATCTGCGGCGCGGGCATGGTGAAGGGGATCGCGGGGGCCAGCTACGAG
ACCCTCGGCGGCGGCGCGAACTCGGTGGCCGACGGCGTCTCGGTGGGGGCGGGGCTCGGCGCGGAGATCGCCGGCACGTT
CGTGCTGGTGTACACCGTGCTCTCCGCCACCGACCCCAAGCGCACCGCGCGCGACTCCTTCATCCCCGT-----------
--------------------------------------------------------------------------------
----------------------------------------------------------GCTGGTGCCGCTGCCCATCGGC
TTCGCCGTGTTCATCGTGCACCTGGCCACCATACCCATCACCGGCACCGGCATCAACCCGGCCAGGAGCCTCGGCGCCGC
CGTCATGTACAACCAGCACAAGGCATGGAAGGACCACGTA----------------------------------------
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>chr5B_1080
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-----------------------------------------------------------------------------AGA
AGGCGCCCTACTGGGACCCGCCGCCGGCCCCGCTGCTGGACACGAGCGAGCTGACCCGGTGGTCGCTGTACCGCGCGGTC
ATCGCCGAGTTCGTGGCCACGCTCATCTTCCTCTACGTCAGCCTCGCCACCGTCATCGGCTACAAGAGCCAGTCCGCCGC
CC------AGCCGGGCACCGGCGTCGGGTACCTCGGCGTCGCCTGGGCCTTCGGCGCCACCATCTTCGTCCTCGTCTACT
GCACCGGCGGCGTCTCAGGCACGCACGCACGCACATATGCATACGTCCA----------TCTC----------------T
CTGCA-ACAACTTAAC-CACACATGCATA-----CGATACGTGAACTGTCGAGTGTGTGCTGC-----------------
------TGCAGGTGGCCACATCAACCCGGCGGTGACGTTCGGGCTGTTCGTGGGGAGGAAGCTGTCGCTGGTGCGCACGG
TGCTGTACATCGTGGCGCAGTGCCTCGGCGCCATCTGCGGCGCCGGCATGGTGAAGGGGATCGCGGGGGCCAGCTACGAG
ACCCTCGGCGGCGGCGCGAACTCGGTGGCCGACGGCGTCTCGATCGGGGCAGGGCTCGGCGCGGAGATCGCCGGCACGTT
CGTGCTGGTGTACACCGTGCTCTCCGCCACCGACCCCAAGCGCACCGCGCGCGACTCCTTCATCCCCGT-----------
--------------------------------------------------------------------------------
----------------------------------------------------------GCTGGTGCCGCTGCCCATCGGC
TTTGCCGTGTTCATCGTGCACCTGGCCACCATACCCATCACCGGCACCGGCATCAACCCGGCCAGGAGCCTCGGCGCCGC
CGTCATGTACAACCAGCACAAGGCATGGAAGGACCACGTA----------------------------------------
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>chr5A_1080
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-----------------------------------------------------------------------------AGA
AGGCGCCGTACTGGGACCCGCCGCCGGCACCTCTGCTGGACACGAGCGAGCTGACCCGCTGGTCGCTGTACCGCGCGGTC
ATCGCCGAGTTCGTGGCCACGCTCATCTTCCTCTACGTCAGCCTCGCCACCGTCATCGGCTACAAGAGCCAGTCGTCCGT
CC------AGGCCTGCACCGGCGTGGGGTACCTCGGCGTCGCCTGGGCCTTCGGCGCCACCATCTTCGTCCTCGTCTACT
GCACCGGCGGCGTCTCAGGCACGCACATATGCACACGTCCA----------------TCTCTC----------------T
CTGCA-ACAACTTAACACACACATGGATA-----CGATACGTGAACTGTCGAGTGTGTGCTGC-----------------
------TGCAGGTGGCCACATCAACCCGGCGGTGACGTTCGGGCTGTTCGTGGGGAGGAAGCTGTCGCTGGTGCGCACGG
TGCTGTACATCGTGGCGCAGTGCCTCGGCGCCATCTGCGGCGCCGGCATGGTGAAGGGCATCGCGGGGGCCAGCTACGAG
ACCCTCGGCGGCGGCGCAAACACGGTGGCCGACGGCGTCTCGGTCGGGGCGGGGCTCGGCGCGGAGATCGCCGGCACGTT
CGTGCTGGTGTACACCGTGCTCTCCGCCACCGACCCCAAGCGCACCGCGCGCGACTCCTTCATCCCCGT-----------
--------------------------------------------------------------------------------
----------------------------------------------------------GCTGGTGCCGCTGCCCATCGGC
TTCGCCGTGTTCATCGTGCACCTGGCCACCATACCCATCACCGGCACCGGCATCAACCCGGCCAGGAGCCTCGGCGCCGC
CGTCATGTACAACCAGCACAAGGCATGGAAGGACCACGTA----------------------------------------
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>SNPs
SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--S-------S-S------S---
-----SS-S-S------------S---S---S--------S------S----S-------------S-------------
----------------------SSSSS---------S----------------S--------------------S-----
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
----------------------------------------------------------------S---------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------SSSSSSSSSSSSSS-------------------------------------------S---------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S-S-----------------------------------------S-------------
--------------------------------------------------------------------------------
SS-S-S------------------S----S------------S----S-------------S-S----------------
-S----------------------------S------------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS------S----------------------------S---------S------------------------
-S----------------------------------S----------------------------S--------------
---SS---------------------SSSSSSS---S--------S----------------------S---S-------
--------SSS----------------------S--S--------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS
>forward_617
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AATCGCTAGATGCAGAGGCC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>reverse_2263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TTAGCGGCGTTCTACCACAA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>forward_1945
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GGCATCTGTCGAACCTGCAT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>reverse_3204
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CCACCATCTTCCACAGGTCC---------------------------------------------------------
--------------------------------------------------------------------------------
-------------
