>input_sequence_57517
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------------------------------------------------------------------------------AT
GGCGCTCAGCACCTGCGTCCTCCCTTCGTTCTCCCCCCAGGCCGCCGTCCTACGCCGTACGTCCACCGTCGCCAACGCTG
CTGCAGCCTCCCGGATTGGCGGCTTCCTCTCCAGCAAGCCCTACGCGCCGCCGCCCTGGGCGTCGGGCCTCTCCCACGCC
CCGTCCCACACCTTCACCCTCGGCCACTTCCCGACCCCGATCCACAGGTGGGACCTGCCCGAGCTCCCCAGAGACACCGA
GGTGTGGATCAAGCGGGACGACCTCGCCGGCATGCAGCTGAGCGGCAACAAGGCCCGGAAGCTCGAGTTCCTCGTGGCGG
ACGCCGCCGCGCGGGGCGCCGACTGCGTCGTCACCGCCGGCGGCATCCAGAGCAACCACTGCCGGGCCACCGCCGTGGCC
GCCAAGTACGCCGGCCTCGACTCCTATCTGATACTCTGCACCTCCAAGCCCCTCGTGGACCGGGACCCTGGTCTCGTCGG
CAACCTGCTCGTCGAGAGGCTGCTGGGCGCGCACATCAACCTGGTCTCGCAGAGAGAATTTTTGAAGTTCGGGAGCGTGG
CTCTGACTGAACTGCTGGAGAAGAGGCTCCTGGAAGAAGGCCGGCGGCCGTACGTGATCCCTGCCGGCGGATCAAACGCA
CTGGGGAACTGGGGATACATCGAAGCAGTCAGAGAGATTGAGGAACAGATTCAGTTATCTGGCGGCGATGTTCAGTTTGA
CGACATTGTCGTCGCGTGCGGCAGCGGTGGGACAGTCGCCGGCCTCGCTTTGGGATCCCAGCTGAGTAGCCTGAAGGCCA
AAGTCCACGCCTTCTCTGTCTGCTATGGCCCTAAATACTTCTACGACTGTGTTCAAGGTCTGATCGATGAGCTTCAGTCT
GGTCTCAACTCACATGATATAGTCAGCATTGAAGATGCCAAGGGCTTGGGTTACGCCAGGAGCACGGCCGAGGAGCTTAG
GTTTGTGAAGGATGTCGCCGCGGCGACAGGCATCGTGCTCGATCCGGTCTACACCGGAAAGGCGGCGTACGGTATGGTGA
AGGACATGTCAGATAATCCAGGCAGCTGGGAAGGGCGACGGGTCCTCTTTGTGCACACCGGTGGTCTCCTTGGACTGTAT
GATAAGGTGGATCAGTTGTCGTCTTTGGCCGGGGGCTGGCGCAGAATGGACCTTGAAGAACCTGTACTCCATGCAAATCT
CAACTAG-------------------------------------------------------------------------
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----------------------------------------------------------
>chr5D_1_TraesCS5D01G467400
ACTGTAGCT-----------------------------------------------------------------------
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---------------------------------------------------------------------------TACTT
CTAGTTGCCTTTTTACCAATTTTCTCTCTCTCTCTCGATGATCAGGGGCTCTCCCCCCGGCTCCGTTTTATATAGAATGA
AACCTCAACCATACATTCCAGT----------------------------------------------------------
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-----------------------------TCAGTTTTTTTGGTAGCAGCAGAAAGTAAAACAGCAAAC--TCACTCAACT
CTGGTCTAAGAAGTAAGAACAGCACTGTCCAGATACTGGACTCGTACAGCCCACATTTTCAGCAGTTATGACCATACTAA
ATAAGCAGCAGGAATCAAACACACGGAGGGAACAGATTACATACAGCAGTCAGGCCTGATCACATGAATGCTACT-TATC
GTCGAGCTCTGGATGCATCCTTAGGAAGTCTACCAAAAATTCATGTCTGCCTCAATTAAAATGGACCCATCTTAGGCAAT
-------------------GCCAACCTTGCAAGAATCTGAAACTGAGTCACAAAGCCGAACAGAGGAGCAAGGTTGTGAA
ACAAAGCTCCCGTCCTGAATCGAACGGAGGGCCAAGCACACGACCGACTGGC-AAATCAAGCCATGGTGCTCGCCGACAG
TCGACTAGGTGGCGCGCATCGGCGCCTCCGGCCGCGGCGACGACCGGCGGATGAGACGAGGCACTGAGCGAATAGGACAC
AAAATGGCGGAGCTCGCCGTACCTGCCTCGCCGGCGACTCACCACTCGCTCGTGGCAGGGCCAATGGGGGAGCCCCCGCC
GTGCTCCTCTCCATCCCCTCCATTTCCTGCCTCGTTCCCTCGCCGGCAGCTCGCCTCCCCGCCCTCGTCCCGCTGCGCTG
TGACAACGGTGAACTGACACGCGGCTGCCTCCGCATAAGGAAAAA--AAACGGTGGACGCCCTGGAAACTGGGC----CG
GGCTTCAAACCCGTTATAAAACGACGCCCGAAGCCCACATGAGCGATAGGCCCGACGGACAAACCCACGAGAACATCGCT
CTTTGACTCAAAA----AAAAAACGAGAACATCGGTCTGAGATTTCAATCCGCCGCCG------------CCGGAGCAAT
GGCGCTCAGCACCTGCGTCCTCCCTTCGTTCTCCCCCCAGGCCGCCGTCCTACGCCGTACGTCCACCGTCGCCAACGCTG
CTGCAGCCTCCCGGATTGGCGGCTTCCTCTCCAGCAAGCCCTACGCGCCGCCGCCCTGGGCGTCGGGCCTCTCCCACGCC
CCGTCCCACACCTTCACCCTCGGCCACTTCCCGACCCCGATCCACAGGTGGGACCTGCCCGAGCTCCCCAGAGACACCGA
GGTGTGGATCAAGCGGGACGACCTCGCCGGCATGCAGCTGAGCGGCAACAAGGCCCGGAAGCTCGAGTTCCTCGTGGCGG
ACGCCGCCGCGCGGGGCGCCGACTGCGTCGTCACCGCCGGCGGCATCCAGAGCAACCACTGCCGGGCCACCGCCGTGGCC
GCCAAGTACGCCGGCCTCGACTCCTATCTGATACTCTGCACCTCCAAGCCCCTCGTGGACCGGGACCCTGGTCTCGTCGG
CAACCTGCTCGTCGAGAGGCTGCTGGGCGCGCACATCAACCTGGTCTCGCAGAGAGAATTTTTGAAGTTCGGGAGCGTGG
CTCTGACTGAACTGCTGGAGAAGAGGCTCCTGGAAGAAGGCCGGCGGCCGTACGTGATCCCTGCCGGCGGATCAAACGCA
CTGGGGAACTGGGGATACATCGAAGCAGTCAGAGAGATTGAGGAACAGATTCAGTTATCTGGCGGCGATGTTCAGTTTGA
CGACATTGTCGTCGCGTGCGGCAGCGGTGGGACAGTCGCCGGCCTCGCTTTGGGATCCCAGCTGAGTAGCCTGAAGGCCA
AAGTCCACGCCTTCTCTGTCTGCTATGGCCCTAAATACTTCTACGACTGTGTTCAAGGTCTGATCGATGAGCTTCAGTCT
GGTCTCAACTCACATGATATAGTCAGCATTGAAGATGCCAAGGGCTTGGGTTACGCCAGGAGCACGGCCGAGGAGCTTAG
GTTTGTGAAGGATGTCGCCGCGGCGACAGGCATCGTGCTCGATCCGGTCTACACCGGAAAGGCGGCGTACGGTATGGTGA
AGGACATGTCAGATAATCCAGGCAGCTGGGAAGGGCGACGGGTCCTCTTTGTGCACACCGGTGGTCTCCTTGGACTGTAT
GATAAGGTGGATCAGTTGTCGTCTTTGGCCGGGGGCTGGCGCAGAATGGACCTTGAAGAACCTGTACTCCATGCAAATCT
CAACTAGGAGGAAAAGCTTGAATCATTTCC--------------------------------------------------
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----------------------------------------TTTTCTGTCAGGATGACCTGATTTGCAGGGCTAGCTTTTA
ACAAATTGATACTGAGGTTGAATTTTGCGAATATTATTGTATTAAAAGTTTAAAAAAAA--TAGAGAATATGGAAAGAGT
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-----------------------ACTTACCAAATCTTTGGCTGTTGCTTCTAGAGTCCATTGGAGAATTTAAAAAGTTTC
TCCCAACTGCGATAGATGTGGAGATCTTGAAACTGACGAACACTTGTTCTTCAACTGTCCCTACTCCAGAGCTACTTGGT
TTCACTCTATCTAGCCTTTTGAACTGAGATCCACTCTGATGATAATTT---------------TATTCATACTATCCTTT
ATCAAGCACCTGAGTCTTCTGTAATTGACCATTCCCTCTATCTTCTGTGGCTGATGCAGAGTCTG---------------
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--------------ATGTATCAAAGTGCAAAGC----------GTAGCTGATGCAGAAACTCATGCTTTATTTCTGGCCA
CACATATGCTCGATCAGCTTCAAATCAATAACCACACCCTGTTATCTGATGAAATGGCTGTTAACCAATGCTTCATTTCT
GGCCACACGTTGTTCTAGCAACCAATGCTACAGATTCCTATATGCCGTCGGTTGAATGGCAACTCAGGCCAACAATCTCT
TTGATCAGATAAATGGCAACTCAGGCCAACCATCTCCATGCCATTAGTGCAGGATTCCTTCACATATCTAGAGATTGAAA
TAAAGAGGCTGGTAGATTTGCAAAAGGAAGCGATGATTGGAAATAGGAAATCTGTAATTTGTATGAATTCAGGTCATGCT
TCCTGCTCTGTTTTCTTTCTTCTGGG-TAATCAGGCTTATGGCATAATAATCATGCATGTAACATACATGTTTATCTAAT
CAATGAATACCCCTGAGGGTGTTTTCCTTAAG-AAAACAGTGTGTTTAGAAACTTGCAAATTTTACACATACCATTTGCT
GTCTCAAATGAAGGTTAATTTGTACTGAATGCTGGGTTGAGCCCGTGAGGCGTAACAC
>chr5A_1
ACTGTAGCT-----------------------------------------------------------------------
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---------------------------------------------------------------------------TGCTT
CTAGCTGGCTTTCTACCAATTTTTTTTACTT-----GATAATCAGGGGCTCTCCCACCGGCTCCATTTTATATAAAAATG
ATC--------------CCAGT----------------------------------------------------------
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-----------------------------TCAGTTTTTTTTGTAGCAGCAGAAAGTAAAACAGGAAACTTTCACTCAACT
CTGGTCTAAGAAGTAAGAACAGCACTGTCCAGATACTGCACTCGTACAGCCCATATTTTCAGCAGTTATGACTGTAC---
-TAAGCAGCAGGAATCAAACACACGGAGGGAACAGATTACA----ACACTCAGGCCTGATCACATCACATGAATGCTATC
ATCGAGCTCTGGATGCAGCTTTAGGAACTGTACCAAAAATTCATGTCTGCCTCAATTAAAATGGACCCATCTTAGGCAAA
GGCAGGAGCAGGGTACATGGCGAACCTTGCAAGAATCTGGAACTGAGTCACAAAGCCGAACAGAGGAGCAAGGTTCTGAA
ACAAAGCTCCC----TGAACCGAACGGAGGGCCAAGCACACGGCTGACTGGGGAAACCAAGCCATGGTGCCCG-------
TCGACTGGGTGGCGCGCATCGGCGCCTCCAGCCGCGGCGACTACCGGCGGATGGGACGAGGCACTGAGCGAATGGGGGC-
--AAAGGCGGGGCTCGCCGTACCTGCCTCGCCGGCGACTCACCACTCGCTCTTGGCAGGGCCAATGGGGGAGCCCCCGCC
GTGCTCCTCTCCATCCCCTCCATTTCCTGCCTCGTTCCCTCGCCGGCAGCTCGCCTCCCCGCCCTCGTCCCGCTGCGCTG
TGACAATGGTGAACTGACACGTGCCTCCGCAT--ATAGGAAAAAA--AAAGCGTGGGCGCCCTGGAAACTGGGCGGGCCG
GGCTTCAAACCCGGTAAAAAACGTCGCCCAAAGCCCACATGAGCGACAGGCCCGACGGACAAACCCACGAGAACATCGCT
CTTTGACTCAAAAGAAAAAAAAACGAGAACATCGGTCTGAGATTTCAATCCGCCGCCG------------CCGGAGCAAT
GGCGCTCGGCACCTGCGTCCTCCCTTCGTTCTCTCCCCAGGCTGCCGTCCTCCGCCGTACGTCCACCGTAGCCAGCGCAG
CTGCAGCCTCCCGGATCGGCGGCTTCCTCTCCAGCAAGCCCTACGCGCTGCCGCCCTGGGCGTCGGGCCTTTCCCACGCC
CCGTCCCACACCTTCTCCCTCGGCCACTTCCCGACCCCGATCCACCGGTGGAACCTGCCCGACCTGCCCAAGGGCACGGA
GGTGTGGATCAAGCGGGACGACCTCGCCGGCATGCAGCTGAGCGGCAACAAGGCGCGGAAGCTCGAGTTCCTCGTGGCGG
ACGCCGCCGCGCGGGGCGCCGACTGCGTCGTCACCGCCGGCGGCATCCAGAGCAACCACTGCCGGGCCACCGCCGTGGCC
GCCAAGTACGCCGGCCTCGACTCCTATCTGATACTCTGCACCCCCAAGCTCCTCGTGGACCGGGACCCCGGCCTGGTCGG
CAACCTGCTCGTCGAGAGGCTGCTGGGCGCGCACATCGACCTGGTCTCGCAGAGAGAATTTTTGAAGTTTGGGAGCGTGG
CTCTCACCGAACTGCTGAAGAAGAGGCTCCTGGAAGAGGGGCGGCGGCCGTACGTGATCCCTGCCGGCGGATCGAACGCA
CTGGGGAATTGGGGATACATCGAAGCAGTAAGGGAGATTGAGGAACAAATTCAGTCATCTGATGGTGGTCTTCAGTTTGA
TGACATTGTTGTCGCGTGCGGCAGCGGCGGAACCGTCGCCGGCCTCGCTTTGGGATCGCAGCTGAGTAGCCTGAAGGCCA
AAGTCCACGCCTTCTCTGTCTGCTATGGCCCTAAATACTTCTATGACTGTGTTCAAGGTCTGATCGATGGGCTTCAGTCT
GGTCTGGACTCACATGATATAGTCAGCATTGAAGATGCCAAGGGCTTGGGTTATGCCAAGAGCACGGGTGATGAACTTAG
ATTTGTGAAGGATGTCGGTGCGGCGACAGGCATCGTGCTCGATCCGGTCTACACCGGGAAGGCGGCTTACGGTATGCTGA
AGGACATGTCAGATAATCAAGCCAAGTGGGAAGGGCGAAAGGTCCTGTTTGTTCACACCGGTGGTCTCCTTGGGTTGTAT
GATAAGGTGGATCAGTTGTCGTCTTTGGCCGGGGGCTGGCGCAGAATGGACCTTGAAGAACCTGTGCTCCATGCAAATCT
CAACTAGGACTGGCTGTTTATCTTTTTTGACTAGTGTTCCTGATTTTGTGCACCCACGACCACGAGGCCACGGCCATAGC
ATTTGAATACTACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTAGTTCAAATTTGAACTAAAACCACGACGAGTAATT
TGGAACGGAGGGGATACTTTACGGGAATTCATTTGTGTGTTTTTCTGCCAGGATGACTTGATCTGCAGTGCTAGCGGTTA
ACAAATCAATACTGAGGTTGAGTTTCGTG---------GTATTAAAAGTTTCTCTAATTCTTAGAGAATATGGAATAGTA
CCTTTAATAATAGACTTTCAAATAATTTGTTCTGTTCCTTTGTGTCATGCATTTGAAAATTTTGTCTTATCATTTATGGT
AAAGCTTATCATCAATTGTAAAATTATGATTCTAAAACTTGTCTATTCTGGGGTTATCTTAAAGGAAATTGATTAAATCT
ATTCATATATCTTAAAGGAAATTGATTAAATGTATTCATATAACACTGGACGAGCACTTGGAACATGGGCAAGATGTTTG
CTGGAGACCCTCCAAATCAGGTAACTGTACATCTCAAAGTGCCTACAGAATCTTCTTACATTAACCAAAAATAAATGATA
CTATCACTGAGATGAACTTTAATCAGATTAGCCTCGGCTTTGTTAAACAAGTTTGGAAAAATGAAAATGTTCTTGCTAGT
GTTCAAACTTTTGTTTGGAGACCACTTACTAAATCTTTGGCTGTTGCATGGGAGAAT----------TTTAAAAAGTTTC
TCCCAACTGCGATAGATTTGGAGATCTTGAAACAGACGAACACTAATTCTTCAACTGCCCTTACTCCAGAGCTATTTGGT
TTCACTCTATCCATCCTTTTGAACTGAGGCCCACTCTGATGATAATTTCACATGTGCTAGTTTTATTCATACTATCTTTT
CTCAAGCACCTGAGTCTTCTGTAATTGATTATGACCTCTATCTTCTCTGGCACATTTGGAAAGCTAGAAATGATCCAAGT
TTTAAGGGGGAAAACACCACTATCCATTCTGTTCTGCACACTGCTAATGCGCATGTCGCTCTCACGCTCTAGCCCTTTGT
GCAGAGACCTCCCTCCCCTGCCAGTCTAATGTTTTGCTGGTACCATCTATATTTAATGGAGCAGATCGACTGACAGACGG
TGAACATCATCCGGCAGCAACTTGCTTCTATTTCTCAATCTCATGCTGCAGGTCTTGAAATTTACATTTGTGCCAACACG
CCATGCATCTCTGCATGTATCAAAGTGCAAGCTCTGCTTCTCTGTAGCTGATGCAGAAGCTCATGCTTTACTTGTAGCCA
CACATATGTTCGATCAGCTTCAAATCAATAACTGCACCCTGTTATCTGATAATATAGCT---------------------
--------GTTGTTCAAGCAATCGATGCGACATATTCCTA-ATGCCATCGGTTGAATGGAAACTCAGGCCAACCATCTCT
TCGATCAGACAAGTGGGT------------------CATGCCATTAGTGCAGGATTCCTTCACATATCTAGAGATTGA--
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---------------------------------------------AATAATCAAGGATGTA----ACATGTTTATCTAAT
CAATGAATACCCCTGAGG-TGTCTTCCTTAAAAAAACATGTGTGCTTAGAAACATGCTAATTTTACACATATAATTTGCT
GTCCCAAATAAAGA-TACTTTGTACTGAATGTTGGGTCGAGCTCGTGAGCGTAACAC-
>chr5B_5
TCGATAATCAGGGGCTCTCCTCCCGGCTCCATTTTATATAAAATGAAACCACAGCCATACACCCCACCTCGGTTTTTTGT
AGCAGCAGAGAGTAACACAGCAAACTCTCTGACTCTCACTCAACTCTGCTCTAAGAACAGCACTCTCCAGATACAGGACC
CATACAGTACAGCCCATATTTTCAGCAGTTATGAACATACTAAATAAGCAGCAGGAATCAAACACGCGGAGGGAACAGAT
TACAACACTCAGGCCTGATCACATGAATTCTATCATCGAGCTCTAGAGTCTGGATGCAGCCTTAGGAACTCTGCAAAAAT
TTCATGTCTGCCTCAATTAAAATGGACCCATCTTATCTTAGGCAAAGAAAGGCAGGAGCAGGGTACGTGGGCAACCTTGC
AAGGATCTGAAACTGAGTCACAAAACCGAACAGAGGAGCAAGGTTCTGAAACAAAGCTCCCGTCCTGAATCGAACGGAGA
ACCAAGCACACGACTGGGAAAATCAAGCCATGGTGTTCGTCAGACTGGGTGGCGCGCATCGGCGCCTCCGGCCGCGGCGA
CGACCGGCGGATGAGACGAGGCACTGAGCGAATATGACATAAAAAAAGGCGGAGCTCGCCGTACCTGCTTCGCCGGCGAC
TCACCACTAGCTCCAGACTGATGGACCGAAAAAGGAAAGAAAAAGCCATACTTTTTTTTGGGGGTAGGAAAAAAAAACCA
TACGAGACTGATGTTTCTCAGATGGGCCAGGCTCTGTCTATCTAGCAGGCAGCAGCCCACGAACCTCACGGGCAAGCACT
TACGAGTCCTTCTAAAAGCTCCCACCGAGGGGGCGCTGGCGCGGCTGTGCAGCAGCACGCCTAACATTAGTCCCACCTCG
CCAGTTTACAGGGAGCAGAACCAGCTTATAAGCCGAGGCGCATCCTGAGGTAGCACGACCTTACTTGAACAGGATCTGTT
CTATAGGCTCGTACCGCTGCATCCTTTACCAATAAGGAGGCAAGCACTTCAGTCTGGTTGATGCATTCTAACCTCTGGGC
CAGAGCGTGATTAACGGCCAGGATTTCCCTGATGGGGCAATCCAATGGCTGTAGAGGATCGTTCCTGCCTTGCTCATGCC
TGTGCAGGGTGGCCCAGAGGTTGTCTGACAGACTACAAAATATATTTTTTTTCCCTTTTGTTTTTCAAGCCAGCCATTTT
TTTCAGAATAACTGAAGACTGCTGGAAAACAAGATAACCGAGGAGGAAAGAATGAGTAAGAGTGGTAGACTAAAAATGAA
AGCCTGATCGCCATCCACCAACTTTATGCACATATGCTAACTCGGTTTTATCAATAATTCTTGTAAAGTATGACAAGCTG
TTTAAACTAAAAAGTCTAAAAACTGATCCTAAAACTGAGAAAAATGGCTGAAGACTAGCAGATAGCTAAACTCTCATGAC
TGAACACTGACAAGACTAAAGGACTAGTAATTAAAACTCAGAAGCACTGGCTACAATTGGTGGGTGGCAGACCTCGGCCG
ACAACGCCACCTCCACTTCAAACTTCTATTTTTCTCTTGGAAAAACAGGGTATAAGTTCTCCATGTAGGGTGCTGCCGTA
TTGATAATCGACCTAGCGCTTAGTATAGCTGAAGAAGAATAGACTGAAATCTGATATGAGCCTTCCTGTTCCTAGAAAGT
TATAACTGACAGAAAAGCAAATGGATATTAGTAATGAAAAGCAAATTAAATTACAAAGGTCTCAAATATGATCTGAGCCT
TCATGTTTCTAAATCAATTATAACTGGCAGAAGAAGAACAAGAAAGTGCAATGACTGGTGACCAAAAGGCCAAAGAGAGC
AAAAACCGCCTACTAGACTCGTGATTTTTTCAACAGAAGACTACTCACTAATGGTGCAAAAGAAAAGCTCTCCTTGTAAT
GAACTAACAATAGGCAAATGAAGCAAAGCTGCACAAAAAAACTATAGCATAGATGGTTGTACTAAGCCCATCAAAATGAA
AAGCAGGAAGCAAAACCTAGCAATAAGCACCAAGCACCGCTTGAAAGATTGTGCACTAATCCATACAGATGTGTTTCCTC
ACAGAAAAAGGACAGTAATAATCTTCAGAAGACACTATTTAAAAAAACAAGTATATATTCTGTTAATAGAGTTTACTAGC
AACTTTGTATCGAAAAAATTGATTCGACGGTAAAAATGGTGAAATTATCCTAAAAGGCTAAAATTGCATCACCAGTCATA
GGACACTTCAGAACTTGATTACCACTAGTTATTCACTCCAGAAAACAAAATGAACCCTACACAACTAGTTAGCAAGATGA
AAAAAAATAGCATCATGAGCACTAAACTACTTTTACACTTTCACATCGCCATAGCAGCAATGCAGCATCAACAAGATAAA
AATGAGCTACTGTCGGCGCGATGAACAAGATGAAATGAGCCGACCAACACCACCACTAGCCACAATATGTTAGCTTACTT
CTACCTAGCTCTCTACCAAAAATTCTTTTTTTTCCCGATAATCAGGGGCTCTCCTCCCGGCTCCATTTTATATAAAATGA
AACCACAGCCATACACCCCACCTCGGTTTTTTGTAGCAGCAGAGAGTACACAGCAAACTATCTGACTCTCACTCAAGTTT
GGTCTAAGAACAGCACTCTCCAGATACAGGACCTATACAGTACAGCCCATATTTTCAGCAGTTATGACCATACTAAGCAG
CAGGAATCAAACACGCGGAGGGAACAGATTACAACACTCAGGCCTGATCACATGAATCCTATCATCGAGCTCTGGAGCCT
GGATGCAGCCTTAGGAACTCTGCCAAAAATTCATGTCTGCCTCAATTAAAATGGACCCATCTTAGGCAAAGAAAGGCAGG
AGCAGGGTACGTGGCCAACCTTGCAAGAACCTGAAGCTGAGTCACAAAACCGAACAGAGGAGCAAGGTTCTGAAACAAAG
CTCAGGTCCTGAATCGAACGGAGGGCCAAGCACACGACTGACAGGGAAATTCAAGCCGTGGTGCTCGTCGACTGGGTGGC
GCGCATCGGCGCCTCCCGCCGCGGCGACGATCTGTGGATGAGACGAGGCACTGAGCGAATATGACATGAAAAAAGGCAGA
GCTCGCCGTACCTGCCTCGCCGGCGAGTCACCACTTGCTCCAGACTGATGGACCGAAAAAGGAAAGAAAAAGGCATACTT
TTTTGGGGGGGGTAGGAAAAAAAGGCCATACGAGACTGATGTTTCTCAGATGGGCCAGGCTCTGTCTATCTAGCAGGCAG
CAGCCCACGAACCTCACGGGCCAGCACTTGCGAGTCCTTCTAAAAGCTCCCACCTCGCCAGTTTACAGGGAGCAGAACCA
GCTTATAACCCGGGGCGCGGCAGGAGGTAGCACGACCTTACTTGAACAGGATCTGTTCTACAGGCTCGTACCGCTGCATC
CTTTACCAATAAGGAGGCAAGCACTTCAGTCAGTTTTTTTTGTAGCAGCAGAAAGTAAAACAGCAAACT--CACTCAACT
CTGGTTTAAGAAGTAAGAACAGCACTGTCCAGATACTGGACTCGTACAGCCCATATTTTCAGCAGTTATGAACATACTAA
ATAAGCAGCAGGAATCAAACACACGGAAGGAACAGATTACATACAACAGTCAGGCCTGATCACATGAATGCTACT-TATC
ATCGAACTCTGGATGAATCCTTAGGAAGTCTACCAAAAATTCATGTCTGCCTCAATTAAAATGGACCCATCTTAGGCAAT
-------------------GCCAACCTTGCAAGAATCTGAAACTGAGTCACAAAGCCGAACAGAGGAGCAAGGTTGTGAA
ACAAAGCTCCCGTCCTGAATCGAACGGAGGGCCAAGCACACGACCGACTGGC-AAATCAAGCCATGGTGCTCGCCGACAG
TCGACTAGGTGGCGCGCATCGGCGCCTCCGGCCGCGGCGACGACCGGCGGATGAGACGAGGCACTGAGCGAATAGGACAC
AAAATGGCGGAGCTCGCCGTACCTGCCTCGCCGGCGACTCGCCACTCGCTCGTGCCAGGGCCAATGGGGGAGCCCCCTCC
GTCCCGCCGGCAG-------------------------CTCGCCGGCAGCTCGCCTCCCCGCCCTCGTCCCGCTGCGCTG
TGACAGCGATGAACTGACACGTGCCTCCGCAT--ATAGGAAAAAACAAACGCGTGGACGCCCTGGAAACTGGGC----CA
GGCTTCAAACCCGGTAAAAACCGACGCCCGAAGCCCACATGAGCGACAGGCCCGACGGACAAACCCACGAGAACATCGCT
CAAG------------------------------------GATTTCAATCCGCCGCCGTCGCCGCCGCCACCGGAGCAAT
GGCGCTCAGCACCTGTATCCTCCCTTCGTTCTCCCCGCAGGCCGCCGTCCTACGCCGTACGTCCACCGTCGCCAACGCCG
CCGCAG---CCCGGATCGGCGGCTTCCTGTCCAGCAAGCCCTACGCGCCGCCGCCCTGGGCGTCGGGCCTCTCCCACGCC
CCGTCCCACACCTTCTCCCTCGGCCACTTCCCGACCCCGATCCACAGGTGGAGCCTGCCCGACCTGCCCAAGGGCACGGA
GGTGTGGATCAAGCGGGACGACCTCGCCGGCATGCAGCTGAGCGGCAACAAGGCGCGGAAGCTCGAGTTCCTCGTGGCGG
ACGCCGCCGCGCGGGGCGCCGACTGCGTCGTCACCGCCGGCGGCATCCAGAGCAACCACTGCCGGGCGACCGCCGTGGCC
GCCAAGTACGCCGGCCTCGACTCCTATCTGATACTCTGCACCTCCAGGCTCCTCGTGGACCAGGACCCCGGTCTCGTCGG
CAACCTGCTCGTCGAGAGGCTGCTGGGCGCGCACGTCGACCTGGTCTCGCAGAGAGAATTTTTGAAGTTCGGGAGCGTGG
CTCTGACTGAACTGCTGAAGAAGAGGCTCCTGGAAGAAGGCCGGCGGCCGTACGTGATCCCTGCCGGCGGATCAAACGCA
CTGGGGAATTGGGGATACATCGAAGCAGTCAGGGAGATTGAGCAGCAAATTCAGTTATCCGGGGGCGATGTTCAGTTCAA
CGACATTGTCGTCGCGTGCGGCAGCGGCGGGACCGTCGCCGGCCTCGCTTTGGGGTCGCAGCTGAGTGGCCTGAAGGCCA
AAGTCCACGCCTTCTCTGTCTGCTATGGCCCTAAATACTTCTATGACTGTGTTCAGGGTCTGATCGATGAGCTTCAGTCT
GGTCTAAACTCACATGATATAGTCAGCATTGAAGATGCCAAGGGCTTGGGTTATGCCAAGAGCACGGGTGATGAACTTAG
ATTTGTGAAGGATGTCGCTGCGGCAACAGGCATCGTGCTCGATCCGGTCTACACCGGGAAGGTGGCATACTGTATGGTGA
AGAACATGTCAGATAATCCAGGCAGGTGGGAAGGGCGAAGGGTCCTCTTTGTGCACACCGGTGGTCTCCTTGGGTTGTAT
GATAAGGTGGATCAGTTGTCGTCTTTGGCCGGGGGCTGGCGCAGAATGGACCTTGAAGAACCTGTGCTCCATGCAAATTT
CAACTAGGACTGGCTGTTTATCTTTTGTGGGATGTGTTGCTGATTTTGTGCACCCACGACCA--------------TAGC
AATTGAATACTACTTAT---------------------------------------------------------------
----------------------GGGAATTGATTTGTGTTTTTTTCTGTCAGGATGATCTGATTTCCAGTGATAGCTTTTA
ACAAATCGATACTGAGGTTTAGCTTCGCGAATATGATTGATTTCC-----------------------------------
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-------------------------------------------------------------CATGCTTTATTTCTGGCCA
CACATATGCTCGATCAGCTTCAAATCAATAACCGCGCCCCGCTATCTGATAAAATGGCT---------------------
--------GTTGTTCTAGCAACCAATGCTACAGATTCCTATATGCCG----------GGCAACTCAGGCCAACCATCTCT
TTGATCAGATAAATTTG------------------CCATGCCATTAGTGCAGGATTCCTTCACATATCCAGAGATTGAAA
TAAAGAGGCTGGTAGATTGGCAAAAGGAAGCGATGATTGGAAATAGGAAACCTGTAATTTTTATGAATTCAGGTCATGCT
TCCTGCTCTGTTTTCTTTTGTTCTGTATAATCAGCCTTATGGCATAATAATCATGCATGTAACATACATGTTTATCTAAT
CAATGAATACCCCTGAGGGTGTTTTCCTTAAAAAAAACAGTGTGTTTAGAAACTTGCAAATTTTACACATACCATTTGCT
GTCTCAAATGAAGGTTAATTTGTACTGAATGCTGGGTTGAGCTCGCAAGCGTAACAC-
>SNPs
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----S--S----S----------S-S-S-S-S--S----S------------------------S---------S-----
----S--S-------SS---------------------------------------------------------------
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----------------------------------------S---------------------------------------
-----------------------------------------------------S--------------------------
---------------------------------------------S----------------------------------
S-------------------------------------------------------------------------------
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---------------------S-S--S-SSSSSS---S-S----------SS----------------------------
-------------S--S-----------------------------S---------------------------------
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------------------------------------------------------------------------------S-
----------------S---------------------------------------------------------------
---------------S-----------------------------------S----------S--S----SS-S---S--
------------------------------------------------------S-------------------------
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-------------------------------------------------S------------------S-----------
-------------------------------------S------------------------------------------
-----------------S--------------------------------------------------------------
--------S-----------------------S--------------S--------------S-----------------
---------------------------S-----S-----------------------S----------------------
-------------------------------------------S------------------------------------
-----S-----------------------------------------------S----S--------SS--S--S-----
S-----------------S--------------------------------------S--------S-------------
-------------------------S------------S----------------------------------SS-----
-----------------------------------------------------------------S--------------
---------SSSSSS-S--SSS-SS---SS--------------------------------------------------
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--------------------------------------------------------------------S-----------
------S--------------S---S--------S----------------SSSS--SS----------------SSSSS
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-----------------------------S-----------------S-SSSSSSSSSSSSSSSSSS-------------
-----------------S---------------S----------SS-----------S--S-------------S-----
-----------S-S--------------SS----------------------------------------------S---
S---------------------------SS--SS------------S----SS--SSS--SSSSS---------------
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------------------------------SSS-------------------------S---------------------
---------------------------------S----------------S--------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-----------------------------------------------------------------S------
----------------SSSSSSSSSSSSSSSSSSS---------------------------------------------
------------------S-------------------------------S---------S-------------------
------------------SS-SSS-S--------S---------------------------------------------
-------------------------------S------------------------------------------------
------------------------------------------S------SSSS-SSSS
>forward_3574
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-----------------------------------CTGGACTCGTACAGCCCAC--------------------------
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>reverse_5361
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GTTTGTGAAGGATGTCGCCG------------------------------------------------------------
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>forward_5049
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---------------------------------------------------------------------GATCAAACGCA
CTGGGGAAC-----------------------------------------------------------------------
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>reverse_7037
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----------------------------------------------------------------------------TTCT
GGCCACACGTTGTTCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
