>input_sequence_57491
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---------------------------------------------------------ATGGCGAAATCTTTCACCTTATT
AGCGCTACTTAGCGCACTGGTTGTGCTCTCACTTCTTGTGAGCCCCATTGCTTGTTCTCGCAAGCTCCCCAGGC------
---------------CTGCAATCAAGGCCCACAAGAACCACACCGCTTCTACCCCCTCGTCGTTTGCCGCTTATGGCTCC
GGCGGCTGGTTAGCCGGCGGCGCGACGTATTACGGCGCCCCCAACGGCGACGGAAGCGACGGTTAGTGCTTGCATGCTTA
CTCCGCTGGGAGTAGAA-----------CGTACTGTAGTACATTAACTGCACCGCACGGCGTCGGTCGA--TGGAGCTAA
AAC-CAGGCA-----AAAAATGCAGGTGGCGCGTGTGGCTACCAGAGCGCTGTGGGGAACCGGCCGTTCTCGTCGATGAT
CGCCGCCGGCAACCCGTCGCTCTACAGAGATGGCAAGGGCTGCGGAGCGTGCTACGAGGTCAGGATAACACACACACGCA
CACGTCCACAGTTTCTGTGACCCCTACACAGCGTGCTGAC--TTCGTGTA--GCTCCACC-CCGTTAAGAGTCATTTTAC
A--------------------GTCCTAACTAAAT-------GAATTCATGTGGCGCGCGTACGCAGGTTAAATGCACAGG
CAACCAGGCATGCTCCGGCCAGCCGGCGACCGTCGTCATCACCGACAAGTGCCCCGCCGGGGCCGCCTGCCTCGGTGAGG
CCGCACACTTCGACATGAGCGGCACCTCCATGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAACTCCGGGCCGGCGGT
ATCATCAAGATCCAGTACAAGAGGTACATACTAATTCAGCGAAGAATTTTGCGCTTGCAG----------------CAGA
AATTAATAG-AGACTGCATTATAATAACTAAGCTAATTTAATCTCGGTGATTCCGTTA---ACCGTAGGGTGCCATGCAA
GTATCCTGGCATGAACATTGCCTTCAAGGTGGACCAGGGCTCCAACCCCTACTACCTGGAGGTCCTGATCGAGTTCGAGG
ACGACGACGGCGACCTCAACGCCGTGGACCTCATGGAGGCCAACTGCGGCACCTGGACGCCCATGGCGCAGAACTGGGGC
GCGCTGTACCGCCTCAACTCCAACACCGGCAAGCCGCTGCGCGGGCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAG
GAAGCTCGTCGTCAACAACGTCATCCCCGCCAGCTGGACGGCCGGAGCCACCTACCGCTCCTTGGTTAACTACCCCTAA-
--------------------------------------------------------------------------------
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--------------------------------------------
>chr6B_1_TraesCS6B01G275800
GCCAATCCAAGCACTTTTTGAACTTTCAGTCACTAGTTTGAACACTGTCTAGTCACGTGCAACAGATCTAGATATAACCT
CTCCCTCTTCTTTCTA----------------------------------------------------------------
--------------------------------------------------------------------------------
-----TCTCTCATGGATTGTATTCTTCTTGTGCACTAGTCCTGGCCATGGGCAGCCCGGCCCGAACAGCTCGACCCGGCC
CGATGTTGTTCACGGGCTGGGCTCGGGCCTAAATTTCAAGCCCAAAGGCCGGCCGGGCCCGGGCCCGCCATATTTGCGTT
TTACCGAAGAGGCCTGGTAGGCTTTTACACGATAGGGCCAGACTTGGGCCTGATTTTTTAGACCCGACGCCCGTACCGGG
CCGGGCCCGGACCTGGGTTTTCTTCGTCGGGCTTGGTTAGGCCCGGCCTGGCCCGAGGGATGGCTAGGTATATTGTGCGC
TCTCTCGGTCTCACAATGGCAGCCACCACTGG----GGACTGACTAGAGTTTTCTCCATGTCTCGCTTTCATAGGAAGCA
CTATCAGTTGTTCGATGTAGCTGAGATCAACGGCTCACATGCGTTGGTCTTATATGGACTGATGTTAGGCTGCCAACACA
CCTTTATGTGAATAAACTTAGCACAACACCTACTTTTGGATTAAAATTCTTAATG-GTATGTTGTGAAATGTACTTCGCA
ATCCATTGTCTG----------------------TCCTATAAATTTTGTTGGTGCTGCATGCAGAGATTAAAAAGTACTC
CCTTCATCATATAATATAAAAATGTTTTTGACACTAGTATAGTGTTAAAAACGATTTTATATTTTAGGACAGAGGGAGTA
GTTCGCCTAGCCTATCCTGCTTTAGCACCAACCAGTCACGTTCTCCTCAATAATTTACCAGAAGCAGAATCCCCACATCT
CTTGCCACGTACGTCTACATCCCCACAAAGTACCCTATAAATACCCGCCCCATGGACACTCCCTGCAACTCACCAAGC-A
ACACTTGAGCTCACCATATCTAGTCCATATCCTCTCCCGAGCAAGCTCGAAGCAGCAATGGCGAAATCTTTCACCTTATT
AGCGCTACTTAGCGCACTGGTTGTGCTCTCACTTCTTGTGAGCCCCATTGCTTGTTCTCGCAAGCTCCCCAGGC------
---------------CTGCAATCAAGGCCCACAAGAACCACACCGCTTCTACCCCCTCGTCGTTTGCCGCTTATGGCTCC
GGCGGCTGGTTAGCCGGCGGCGCGACGTATTACGGCGCCCCCAACGGCGACGGAAGCGACGGTTAGTGCTTGCATGCTTA
CTCCGCTGGGAGTAGAA-----------CGTACTGTAGTACATTAACTGCACCGCACGGCGTCGGTCGA--TGGAGCTAA
AAC-CAGGCA-----AAAAATGCAGGTGGCGCGTGTGGCTACCAGAGCGCTGTGGGGAACCGGCCGTTCTCGTCGATGAT
CGCCGCCGGCAACCCGTCGCTCTACAGAGATGGCAAGGGCTGCGGAGCGTGCTACGAGGTCAGGATAACACACACACGCA
CACGTCCACAGTTTCTGTGACCCCTACACAGCGTGCTGAC--TTCGTGTA--GCTCCACC-CCGTTAAGAGTCATTTTAC
A--------------------GTCCTAACTAAAT-------GAATTCATGTGGCGCGCGTACGCAGGTTAAATGCACAGG
CAACCAGGCATGCTCCGGCCAGCCGGCGACCGTCGTCATCACCGACAAGTGCCCCGCCGGGGCCGCCTGCCTCGGTGAGG
CCGCACACTTCGACATGAGCGGCACCTCCATGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAACTCCGGGCCGGCGGT
ATCATCAAGATCCAGTACAAGAGGTACATACTAATTCAGCGAAGAATTTTGCGCTTGCAG----------------CAGA
AATTAATAG-AGACTGCATTATAATAACTAAGCTAATTTAATCTCGGTGATTCCGTTA---ACCGTAGGGTGCCATGCAA
GTATCCTGGCATGAACATTGCCTTCAAGGTGGACCAGGGCTCCAACCCCTACTACCTGGAGGTCCTGATCGAGTTCGAGG
ACGACGACGGCGACCTCAACGCCGTGGACCTCATGGAGGCCAACTGCGGCACCTGGACGCCCATGGCGCAGAACTGGGGC
GCGCTGTACCGCCTCAACTCCAACACCGGCAAGCCGCTGCGCGGGCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAG
GAAGCTCGTCGTCAACAACGTCATCCCCGCCAGCTGGACGGCCGGAGCCACCTACCGCTCCTTGGTTAACTACCCCTAAG
TTACAGCTTCGTCAGC--TTTTACACTGCACCGTACGTGCTTGGCTAGTAACCAAGTAATGCAGTGCAGAGTGTGGTCGT
AGTAATTTAGAACCGTGGGTTAATTTCTACTGCGGGGATTATATTTATACGAATATGCGTCCGGGAATGGCAGGAGGCTG
TGTCAGAAGAGGAAGAGTAGGTCATGCAAAGATTGTGCTAGCTCTTCCCTCCATGGTCTCTCGGCACTCCCCTAGTGATG
CGTGTCGTCGATTTGTCTGTATTTTACTTCTCTTCCTCTGTTTTGTTGATGAGTAGAAGAGCTTGTAGTGCAGTGC-AAC
TAAAGTTGCATGCCGATGTATCAAGTTGTGTGAGTGTTTTT--TTTTGCAGTGCAATCCTTGAGAGGAATGAACTTTTAC
CATCAGATAATTTATGTACTGAAATCTGCAATTCCAGGCACTTTATTCAGTTTAATTACCAAGCGTAAAGTCACTCTCTC
AACTCTCAGTGTGTGTATTACTGCTTGCAAACTGCACCTGAGCCGCTCCTCGCTGGGGGTGCACTACATTTGCGGAACCT
GCCCAAAATGTGCAGAGCTCTTCCTATGAGCACTGATGTTTTTCACACTCTGTCCTTCATTCTTCATGGACCGTGTAATT
GTGAAGTACTTTTTTACTATTCTGACCCTTTCAACAAACTTTGTCACAAAATGAACTCGACGTGAAAGTATTTCACGATC
TGATCCTTTTAGCAACGCCACAGCCCGCGGCGTTTCTGTCCAACATAGAAACGCCGAGGTAGCTAGCGTTTCTGACCAAG
AAGAAACGCCGAGGTAGCTAGCATTGCGGACCAGGTAAGAAACGCCAAAGGCGCTGGCGTTGCTGCCCATCATTGAAACG
CCAATGACCATGGCGTTGCTGCCCTTTTCCATGCACATGTGAAATGTGGATGAACAGCCTAACTAATAAGGCTAATTAAT
TATGACCAAAGAGGTCAGCAACGCCATGGTCCCTTGGCGTTTCA
>chr6A_1
GCCAATCCAAGCACTTTAAAA--TTTCAATTACTAGTTTGAACACTGTCTAGTCACGTGCAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTCTCTCATGGGTTGTATTCTT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTGTGCGC
TCTCTAAGTCTCATAATGGCAGCCACCACCGA----GGACTGACTAGAGTTTTCTCCTTGTTA---------AGGAAGCG
CTATCAGTTGTTCGATGTAGCTGAGATCAACGGCTCACATGCGTCGGTCTTATATGGACTGATGTTAGGCTGCCAACACA
CCTTCATGTGGAGGGACTTAGGTCAACACCTATTTCTGTATTAAAATTCTCAATG-GTATGTTGTGAAATGTACATCGCA
ATCCATTTTCGTTACAAAAGTAGAGTATTGTCTCTCCTATAAATTTTGTTCGTGCTGCATGCAGTGATTAAAAAA-----
------------------------------------------------------------------------------TA
GTTCGCTTAGCCTATTCTGCTTTAGCACCAACCAGTCACGTTCTCCTCAATAATTTACCAGAAGCAGAATCCCCACATCT
CTTTCCACGTACGTCTACATCCCCACAAGGTACACTATAAATACCCGTCCCGTGGACACTCCCTGCAACTCACCAAGCAA
ACACTTGAGCTAACCATATCTAGTCCATATCCTCTCCCAAGCTAGCTCGAAGCAGCAATGGCGAAATCTTTCACCTTATT
AGCGCTACTTAGCGCACTGGTTGTCCTCTCACTTCTTGTGAGCCCCATTGCTTGTTCCCGCAAGCTCCCCAGGC------
---------------CTGCAACCAAGGCCCACAAGAACCACACCGCTGCTACCCCTTCGTCGTCTGCCGCTTATGGCTCC
GGCGGCTGGTTAGCCGGCGGCGCGACGTATTACGGCGCCCCCAACGGCGACGGAAGCGACGGTTAGTGCTTGCATGCTTA
CTCCGCTGGGAGTAGAA-----------CGTG-----GTACATTAACTGCACCGCACAGCGTTGAGATGGGTGGAGCTAA
AAATCAGGC-----CAAAAATGCAGGTGGCGCGTGTGGCTACCAGAGCGCTGTCGGCAACCGGCCGTTCTCGTCGATGAT
CGCCGCCGGCAACCCGTCGCTCTACAGAGATGGCAAGGGCTGCGGAGCGTGCTACGAGGTCAAGATAAC-----------
---------------------CCCTAAACAGAGTGCTGACTTTTCGTGTATAGCTCCACT-CCATTAA------------
-------------------TGGTCCTAACGAAAT-------GAATTCATATGGCGCGCGTACGCAGGTTAAATGCACAGG
CAACCAGGCATGCTCCGGCCAGCCGGCGACCGTCGTCATCACCGACGAGTGCCCCGCCGGGGCCGCTTGCCTCGGTGAGG
CCGCCCACTTCGACATGAGCGGCACCTCCATGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAACTCCGGGCCGGCGGT
ATCATCAAGATCCAGTACAAGAGGTACATACTAATTGAGCGAAGAATTTTGCGCTTGCAG----------------CACA
AATTAACAG-AGACCGCATTATAATAACTAAGCTAATTTAATCTCGGTGTTTTCGTTA---ACCGCAGGGTGCCATGCAA
GTACCCTGGCATGAACATTGCCTTCAAGGTGGACCAGGGCTCCAACCCCTACTACCTGGAGGTCCTGATCGAATTCGAGG
ACGACGACGGCGACCTCAACGCCGTGGACCTCATGGAGGCCAACTGCGGCACCTGGACGCCCATGGCGCAGAACTGGGGC
GCGCTGTACCGCCTCAACTCCAACACCGGCAAGCCGCTGCGCGGGCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAG
GAAGCTCGTCGTCAACAACGTCATCCCCGCCAGCTGGAAGGCCGGAGCCACCTACCGCTCCTTGGTTAACTACCCCTAAG
TTACAGCCTCATCAACTTTTTTTCACTGCGCCGTACGTGCTTGGCTAGTAACCAAGAAGTGCAGTGCAGAGTGTGGTCGT
GGTAATTTAGAACCGCGGGTTAATTTCTACCGCGGGGATTGTATTTATACGAATATGCGTCCGGGAACGGCAGGAGGCTG
TGTCAGAGGAGGAGGAGCAGGCCATGCAAAGATTGTGCCAGCTCTTCCCTCCATGGTCTCTCGGCGCTCCCCTAGTGATG
CGTGTCGTCGATTTGTATGTATTTTGTTTCTCTTCCTCTGTTTTGTCGATGAGGAGAAAAGCTTGTAGTGCAGTGCAAAC
TAAAGTTGCACGCCGATGTATCAAGTTGTGTGAGTGTG--T--TTTTGGAGCCCAATCCTTGAGAGAAATGAACTTTTAC
CATCAGATAATTTATGTACTGAAATCTGCAATTCCAGCCACTTTATTCAGTTTAATTACCAAGCGTAAAGTCACTCTCTG
AACTCTCAATGTGTGTATTACTACTTGCAAACTGCACCTGAGCCACTCTTCGCTGGGGATGCGCTACATTTGCAGAACCT
GCCCAAAGTGTGCAGAGCTCTTCCTATGAGCACTGATGTTTTTCACACTCCGTCCTTCATTCTTCATGGACCGTGTAA--
--------------------------------------------------------------------------------
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--------------------------------------------
>chr6D_404
--------------------------------------------------------------------------------
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------------------------------------------------------------------------TTGTGCGC
TCTCTCAGTCTCACAATGGAAGCCACCACCGGGATTGGACTGACTAGAGTTTTCTCCTTGTCTCGCTTCCTTAGGGAGCA
CTATCAGCTGTTCGATGTAGCTGAGATCAACGGCTCACATGCGTTTGTCTTATATGAGTTGATGTTAGGCTGCCAACACA
ACTTCATGTGGAGGGACTTAGCCCAACACCTACTTTTCCATTAAAATTCTCAACATGTGTGTTGTAAAATGTACTTCGCA
ATCTATTTTCGTTACAAAGGAGAGA--------CTCCTATAAATTTTGTTGGTGCTGCATGCAGAGATTAAAAAA-----
------------------------------------------------------------------------------TA
GTTCGCTTAGCCTATTTTGCTTTAGCACCAACCAGTCACGTTCTCCTCAATAATCTACCAGAAGCAGAATCCCCACATCT
CTTGCCACGTACGTCTACATCCCCACAAAGTACACTATAAATACCCGTCCCATGGACACTCCCTGCAACTCACCAAGC-A
ACACTTGAGCTCACCATATCTAATCCATATCCTCTCCCAAGCTAGCTGGAAGCAACAATGGCGAAATCTTTCACCTTAAT
AGCGCTACTTAGCGCACTGGTTGTGCTTTCACTTCTTGTGAGCCCCATTGCTTGTTCCCGCAAGCTCCCCAAGC------
---------------GTGCAACCAAGGCCCACAAGAACCACACCGCTTCTACCCCCTCGTCGTTTGCCGCTTATGGCTCC
GGCGGCTGGTTAGCCGGCGGCGCGACGTATTACGGCGCCCCCAACGGCGACGGAAGCGACGGTTAGTGCTTGCATGCTTA
CTCCGCTGGGAGTAGAA-----------CGTA-----GTACATTAACTGCACCGCACGGCGTTGAGATGGGTGGAGCTAA
AAATCAGGCA-----AAAAATGCAGGTGGCGCGTGTGGCTACCAGAGCGCTGTGGGGAACCGGCCGTTCTCGTCGATGAT
CGCCGCCGGGAACCCGTCGCTCTACAGAGATGGCAAGGGCTGCGGAGCGTGCTACGAGGTCAGGATAAC-----------
---------------------CCCTAAACAGCGTGGTGAC--TTCGTGTATAGCTCCACT-CCATTAA------------
-------------------TGGTCCTGACGAAAT-------GAATTCATGTGGCGCGCGTACGCAGGTCAAATGCACAGG
CAACCAGGCATGCTCCGGCCAGCCGGCAACCGTCGTCATCACCGACGAGTGCCCCGCCGGGGCCGCCTGCCTCGGTGAGG
CCGCCCACTTCGACATGAGCGGCACCTCCATGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAACTCCGGGCCGGCGGT
ATCATCAAGATCCAGTACAAGAGGTACATACTAACTCCGCGAAGAATTTTGCGCTTGCAG----------------CACA
AATTAACAG-AGACTGCATTACAATAACTAAGCTAATTTAATCTCGGTGATTTTGTTA---ATGGTAGGGTGCCATGCAA
GTACCCTGGCATGAACATTGCCTTCAAGGTGGACCAGGGCTCCAACCCCTACTACCTGGAGGTCCTGATCGAGTTCGAGG
ACGACGACGGCGACCTCAACGCCGTGGACCTCATGGAGGACAACTGCGGCACCTGGACGCCCATGGCGCAGAACTGGGGC
GCGCTGTACCGCCTCAACTCCAACACCGGCAAGCCGCTGCGCGGGCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAG
GAAGCTCGTCGTCAACAACGTCATCCCCGCCAGCTGGAAGGCCGGAGCCACCTACCGCTCCTTGGTTAACTACCCCTAAG
TTACAGCCTCATCTACTTTTTTTCACTGCACCGTACGTGCTTGGCTAGTAACCAAGAAGTGCAGTGCAGAGTGTGGTCGT
GGTAATTTAGAACCGTGGGTTAATTTCTACTGCGGGGATTGTATTTATACGTATATGCGTCCGGGAACGGCAGGAGGCTG
TGTCAGAAGAGGAGGAGTAGGCCATGCAAAGATTGTGCTAGCTCTTCCCTCCATGGTCTCTCGGCACTCCCCTAGTGATG
CGTGTCGTCGATTTGTCTGTATTTTGTTTCTCTTCCTCTGTTTTGTTGATGAGGAGAAAAGCTTGTAGTGCAGTGCAA-C
TAAAATTGCACGCCGATGTATCAAGTTGTGTGAGTGTG--TGATTTTGCAGCTCAATCCTTGAGAGAAATGAAATTTTAC
CATCAGATAATTTATGTACTGAAATCTGCAATGCCAAGCACTTTATTCAGTTTAATTACCAAGCGTAAAGTCACTCTC--
-------AATGTGTGTATTACTAGTTGCAAACTGCACCTGAGTCACTCCTCATTGGGGATGCACTACATTGGCAGAACCT
GCTCAAAATGTGCAGAGCTCTTCCTATGATCGCTGATGTTTCTCACACTCTGTCCTTCATTCTTCATGGACCGTGTAATT
GTAAAGTACTTGTGTTTA--------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr3D_983
AGCAAGCTACAAGC------------------------------------------------------------------
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--------------------------------------------------AGCAGCAATGGCGAAAACTTGCACCTTA--
-GTGCTGCTTGGCGCACTGGTGGTGCTCTCACTCCTTGTGAGCCCCATTGCTTGCTCCGGCAAGCTCGCCAAGGTGGCCG
GGCCACACAAGCCTGCTGCAGTCAAGGGCCACAAAAACCAGACG---ACTAACCCCTCTTCGTCCGCCGCATACGG---C
GGCGGCTGGTTGCCCGCCGGCGCCACGTATTACGGAAACCCTAACGGCGCCGGAAGCGACGGTTAGTGCTT---TGCTTA
CTTTACTGTCGGTCTTGCACG-------CATG-----GGACCTGTATCGCACCCACATTCGTCGAGCTGAAAGATA---C
TGAT---AAGGAAAGAAATTTGCAGGTGGCGCGTGTGGCTACCAGACCGCTGTTGGGCACCGGCCGTTCTCGTCGATGAT
CGCCGCCGGGAGCTCGCCTCTATTCATGGCGGGCATGGGCTGCGGCGCGTGCTATGATGTAAGCATAAGTCACCAAG---
-------------------------------------------------------CTCCTTCCATTAATGGCGCAAATTG
GACAAGTGGTCGGCTCGGCTTGTCCTGACAAATTACAAAACGTGTTCATGTG----GCGTACGCAGGTTAAATGCACGAG
CAACTCAGCCTGCTCCGGGAAGCCTGTGACCGTCGTCATCACCGACCTGAGCCCCGGCAACCT---CTACCCCGGCGAGC
CGTGCCATTTCGACATGAGCGGCACCGCCCTGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAGCTCCGCGCCGGCGGT
GTCATCAGGATGCAGTACAAGAGGTACGTAGCACTACGACATAGGATAGGATCC--TCTTCAGTCTACAGTT-AGACGGA
AAACAATGGAAG------------TAAATGTCT---GCTGATCTTGGTGTTCCTGTTAATCATCCTAGGGTGCCATGCAA
GTACCCTGGCGTGAACATTGCATTCAGGGTGGACCAGGGCTCCAACCCCTTCTACTTCAAGACCCTGATCGAGTTCGTGG
GCGACGACGGCGACCTCAAGGCCGTGGCCCTCAAGGAGGCTGGAAGCGGCGCCTGGACGCCAATGGCGCAGGACTGGGGC
GCACTGTGGCGCCTCAAC------AACGGCAGGCGGCTGCGCGCCCCATTCTGCCTCAAGCTCACCTCCGACTCCGGCAG
GGTCCTCGTCGTCAACAACGTCATCCCCGCCAACTGGAAGGCCGGGGCCACGTATCGCTCCCTGGTGAACTACCGCTAAG
TTACA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr6B_994
--------------------------------------------------------------------------------
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--------------------------------------------------AGCAGCAATGGCGAAAACTTGCACCCTA--
-GCGCTACTTGGCGCACTGCTGGTGCTCTCGCTTCTTGTGAGCCCAATTGCTTGCTCCCGCAAGCTCGCCAAGGTGGGCG
GGCACGACAAGTCTGCTCCGGTCAAGGGCCACAAAAACCAGACCACCACTAACCCCTCCTCGTCCGCCGCATACGG---C
GGCGGCTGGTTGCCCGCCGGCGCCACGTATTACGGCAACCCCAACGGCGACGGGAGCGACGGTTAGTGCCT---TGCTTA
CTTTACTGTCGGCCTTATGTCCATAATCCATG-----GGACTTACGTCGCACCCACATTCATCGAGCTGAAAGATA---C
TGACGACAAGAAAACAAATTTGCAGGCGGAGCGTGTGGCTACCAAACCGCTGTTGGGCACCGGCCGTTCTCGTCGATGAT
CGCCGCCGGGAGCTCGCCTCTGTTCATGGCGGGCAAGGGCTGCGGCGCGTGCTATGATGTAAGCATAACTCACCAAG---
-------------------------------------------------------CCCCTTCCATTAATGGTGCA-----
---AAGTGGTCGGCTCGGCTGGTCCTGACAAAAT-------GTGTTGATGTG----GCGTACGCAGGTTAAATGCACGAG
CAACTCGGCCTGCTCCGGGAAGCCTGTGACCATCGTCATCACCGACCTGAGCCCCGGCAACCT---CTACCCCGGCGAGC
CGTGCCATTTCGACATGAGCGGCACCGCCCTGGGCGCCATGGCGAAGCCTGGCATGGCCGACAAGCTCCGCGCCGGCGGT
GTCATCAGGATGCAGTACAAGAGGTACGCA---CTACCACCTAGGATCCTCTTCAGTCTTCAGTCTACAGTT-GCACAGA
AAATAATGG-AG------------TAAATATGT---GCTGATCTTGGCGTTCCTGTTAATCATGGCAGGGTGCCATGCAA
GTACCCTGGCGTCAACATTGCCTTCAGGGTGGACCAGGGCTCCAACCCCTTCTACTTCAAGACCCTGATCGAGTTTGAGG
ACGACGACGGCGACCTCAAGGCCGTGGCCCTCAAGGAGGCCGGCAGCGGCGCCTGGACGCCCATGGCACAGGACTGGGGC
GCATTGTGGCGCCTCAAC------GAGGGCAGGCAGCTGCGCGCCCCCTTCTCGCTCCGGCTCACGTCCGACTCCGGCAG
GAAGCTCGTCGTCAGCAACGTCATCCCCGCCAACTGGAAGGCCGGGGCCACGTACCGCTCCCTGGTGAACTACCCCTGAG
TCACAGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr6A_994
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------AGCAGCAATGGCGAAAACTTGCACCCTA--
-GCGCTGCTTGGCGCGCTGGTAGTGCTCTCGCTTCTTGTGAGCCCCATTGCTTGCTCCCGCAAGCTCGCCAAGGTGGGCG
GGCACCACAAACCTGCTCCAGTCAAGGGCCACAAAAACCAGACCACCACTAACCCCTCCTCGTCCGCCGCATACGG---C
GGCGGCTGGTTGCCCGCCGGCGCCACGTATTACGGCAACCCCAACGGCGACGGGAGCGACGGTTAGTGCCT---TGCTTA
CTTTACTGTCAGCCTTATGTCCATAATCCATG-----GGACCTAC-----------ATTCATCGAGCTGAAAGATAGTAC
TGATGACAAGAAAACAAATTTGCAGGCGGAGCGTGTGGCTACCAGACCGCTGTCGGGCACCGGCCGTTCTCGTCGATGAT
CGCCGCCGGGAGCTCGCCTCTGTTCATGGCGGGCAAGGGCTGCGGCGCGTGCTATGATGTAAGCATAACTCACCAAG---
-------------------------------------------------------CCCCTTCCATTAATGGTGCA-----
---AAGTGGTCGGCTCAGCTGGTCCTGACAAAAT-------GTGTTCATGTC----GCGTACGCAGGTTAAATGCACGAG
CAACTCGGCCTGCTCCGGGAAGCCTGTGACCGTGGTGATCACCGACCTGAGCCCCGGCAACCT---CTACCCCGGCGAGC
CGTGCCATTTCGACATGAGCGGCACCGCCCTGGGCGCCATGGCGAAGCCCGGCATGGCCGACAAGCTCCGCGCCGGCGGG
GTCATCAGGATGCAGTACAAGAGGTACGCAGCACGACCACATAGGATCCTCTTCAGTCTTCAGCCTACAGTTTACACGGA
AAACAATGG-AG------------TAAATGTGTAGAGCTGATCTTGGCGTTCCTGTTAACCATGGCAGGGTGCCATGCAA
GTACCCCGGCGTCAACATTGCCTTCAGGGTGGACCAGGGCGCCAACCCCTTCTACTTCAAGACCCTGATCGAGTTCGAGG
ACGACGACGGCGACCTCAAGGCAGTGGCCCTCAAGGAGGCCGGCAGCGGCGCCTGGACGCCCATGGCGCAGGACTGGGGC
GCGCTGTGGCGCCTCAAC------AATGGCAGGCGGCTGCGCGCCCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAG
GAAGCTGGTCGTCAACAACGTCATCCCCGCCAACTGGAAGGCCGGGGCCACGTACCGCTCCCTGGTGAACTACCCCTGAG
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr6D_994
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------AGCAGCAATGGCGAAAAGTTGCACCTTA--
-GCGCTACTTGGCGCACTCCTGGTGCTCTCGCTTCTTGTGAGCCCCATTGCTTGCTCCCGCAAGCTCGCCAAGGCGGCGG
GGCACCACAAGCCTGCTCCAGTCAAGGGCCACAAAAACCAGACCACCACTAACCCCTCCTCGTCCGCCGCATACGG---C
GGCGGCTGGTTGCCCGCCGGCGCCACGTATTACGGCAACCCCAACGGCGACGGGAGCGACGGTTAGTGCCT---TGCTTA
CTTTACTGTGGGCCTTATGTCCATAATCCATG-----GGACCTACGTCGCACCCACATTCATCGAGCTGAAAGATA---C
TGACGACAAGAAAACAAATTTGCAGGCGGAGCGTGCGGCTACCAGACCGCTGTAGGGCACCGGCCGTTCTCGTCGATGAT
CGCCGCCGGGAGCTCCCCTCTGTTCATGGCGGGCAAGGGCTGCGGCGCGTGCTATGATGTAAGC--AACTCACCAAG---
-------------------------------------------------------CCCCT-CCATTAATGGTGCA-----
---AAGTGGTCGGTTCGGCTGGTCCTGACAAAAT-------GTGTTGATGTG----ACGTACGCAGGTTAAATGCACGAG
CAACTCGGCCTGCTCCGGGAAGCCTGTGACCGTGGTCATCACCGACCTGAGCCCCGGCAACCT---CTACCCCGGCGAGC
CGTGCCACTTCGACATGAGCGGCACCGCCCTGGGCGCCATGGCGAAGCCCGGCATGGCCGACAAGCTCCGCGCCGGCGGT
GTCATCAGGATGCAGTACAAGAGGTACGCAGCAGCACCACATAGGATCCTCTTCAGTCTTCAGCCTACAGTT-ACACGGA
AAACAATGG-AG------------TAAATGTGT---GCTGATCTTGGCGCTCCTGTTAATCATGTCAGGGTGCCATGCAA
GTACCCCGGCGTCAACATTGCCTTCAGGGTGGACCAGGGCGCCAACCCCTTCTACTTCAAGACCCTGATCGAGTTCGAGG
ACGACGACGGCGACCTCAAGGCCGTGGCCCTCAAGGAGGCCGGCAGCGGCGCCTGGACGCCCATGGCTCAGGACTGGGGC
GCTCTGTGGCGCCTCAAC------AATGGCAGGCGGCTGCGCGCCCCCTTCTCGCTCCGGCTCACCTCCGACTCCGGCAG
GAAGCTCGTCGTCAACAACGTCATCCCCGCCAACTGGAAGGCCGGGGCCACGTACCGCTCCCTGGTGAACTACCCCTGAG
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>SNPs
-----------------SSS-SS-----S-S-------------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
------S----------------------S---------------------------S----------S-S---------
--------------------------------------------------------------------------------
----S-----S-SSS-------S---------------S-----------S-----------------------------
-------S--SS--------------------------------------------------------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
------S--------S----------------------------------------------------------------
---------------------------------S-------------S--------------------------------
--------------------------------------S---S-------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------SSSSS---------------------------SS-SS-----------
--S-----------------------------------------------------------------------------
---------------------------------------------------------------------S---SS-SSSS
SSSSSSSSSSSSSSSSSSSSS-----S--------------------------------S---S----SS--SSSSS-SS
S----------------------------S--------------------------------------------------
----------------------------------------------S---------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
-------S--S---S-------S---------------------------------S-S---------------------
S---------------------------------------S--------------------------S------------
-------------S-------S----------------------------------------------------------
-------------------------SS--------------------------S----S---------------------
----------S--------------------------SSS-----------SS-------------S-------------
-------------------------------------------------------------------------------S
--------S-------------S---------------------S-------------S--------------S------
--------------------------------------------------------------------------------
--S--------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_517
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TTTTCTTCGTCGGGCTTGGT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1678
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GCA
CACGTCCACAGTTTCTG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_1473
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCGCTGGGAGTAGAACGTAC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_3308
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GGACCAGGTAAGAAACGCCA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
