>input_sequence_57426
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--------------------ATGCCACCAGTG---CTCCTGCTCGTCCTGGCCGCCTCGCTCGTGGCGCTGCCGT-----
----CGTGCCAAAGCCTTCCGGTGCTCGCTCCGGTGACCAAGGACCCCGCCACCTCCCTCTACACAATCCCCTTCCACGA
CGGCGCCAGCCTCGTCCTCGACGTCGCCGGCCCGCTCGTCTGGTCCACGTGCGAGGGCGGCCAGCCGCCGGCGGAGATCC
CGTGCAGCAGCCCCACCTGCCTCCTCGCCAACGCCTACCCCGCCCCGGGCTGCCCAGCGCCCAGCTGCGGCAGCGACACG
CA---CGACAAG---CCGTGCACGGCGTACCCGTACAACCCGGTCACCGGCGCGTGCGCCGCCGGGAGCCTCTTCCACAC
CAGGTTCGCAGCCAACACCACCGATGGGAGCAAGCCGGTGAGCAAGGTGAACGTGGGGGTCCTGGCGGCCTGCGCGCCGA
GCAAGCTCCTGGCGTCGCTGCC----CCGGGGCTCCACGGGCGTGGCCGGGCTCGCGGACTCCGGCCTGGCGCTGCCGGC
GCAGGTGGCGTCCGCGCAGAAGGTCGCCAAAAGGTTCCTCCTCTGCCTCCCCACCGG--------CGGCCCTGGCGTGGC
CATCTTCGGCGGCGGCCCGCTCCCGTGGCCGC---------------AATTCACGCAGTCGATGCCGTACACGCCGCTCG
TCACCAAGGGCGGCAGCCCCGCACACTATATCTCGGCCAGGTTCATCGAAGTGGGGGACACCCGCGTCCCCGTATCGGAG
GGCGCGCTCGCCACCGGCGGCGTGATGCTCAGCACGAGGCTGCCCTACGCCGTGCTCCGCCGCGACGTGTACCGCCCGTT
GGTGGACGCGTTCACCAAGG-CCCTGGCGGCGCAGCATGCCAACGGAGCGCCCGTGGCGCGCGCAGTGGAGCCTGTGGCG
CCGTTCGGGGTGTGCTACGACACGAAGACGCTGGGCAACAACCTCGGCGGGTACTCGGTGCCCAACGTCCAGCTGGCGCT
CGATGGCGGGAGTGACACCTGGACGATGACCGGGAAGAACTCGATGGTGGACGTCAAGCCGGGGACGGCGTGCGTTGCGT
TCGTGGAGATGAAGGGGGTGGAGGCCGGCGACGGCAGGGCGCCGGCGGTGATCCTCGGAGGGGCCCAGATGGAGGACTTC
GTGCTCGACTTCGACATGGAGAAGAAGCGGCTCGGGTTTAGCAGGCTGCCGCACTTTACGGGTTGCGGCG----------
-----GCCTGTAA-------------------------------------------------------------------
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---------------------------------------------------
>chr3D_1_TraesCS3D01G467300
ATTTTTAACTAGCTACTTGATGTTTTTCTCATACTTTTTTATTTTAAAAAAAATTCAGAAATTTGTTGGCTGTCTGGTAA
AAAAAATCTGTGTCTATTAAAAATGTTGAGCATATATTATTAGAAGTTCACCATACATTAAGAAAAAATTCACCTTGTAA
AAGAAAAGTTCACCATAGGTTACAAAAAAAGCTCATCATACATTACAAAAGTTCACTATATATAAAATGTTCATCACATA
TTAAACAATTAAGCCTACATTACAAAATATTTGTTTTATGTGAAAATAATGTTCATCGTATATAATGAGAAAAAAATAAA
AGCAAAAACAAAACGCAAGAAATAAGAAAAGAAATAAAGTACAAACCAGTTAGAATAAGAAAATAAAAGAACAGAAAAAG
AAACTACAAAAAAGAAAGGAAAAGGAGTGGCCAACTAAACATGCGAGCATTTTTTAATAGTTTTCGTTGCAATGAGTTAG
TCTACTTTTCCATATACACAAACATACTCGAAATAGCTGCACTATTTTTACT-GCCTTTGTTATACGAACAACACAAAAG
AAGACGTGTGAGA---------------------ATGTTGTA-AGGTTTCCCTAGTCGGTGGCCCACCAAATTTTACTCG
CAGCAGGAGAGAAGTGATAGTGGTCAATTTCTGGTGGCCCTGCTTTTGCTCGGTCGCCGCACATAGGAAGCGGCGAGAAA
ACCAAAAATAA------AAAAAGGAAGCGAG------AAAGAACAATCTTGTCGGTAGTAGACTCCACACACGTGGTCGC
GAGTAGTC-CATTTTTGCG----------------------GCAGAGCGGTAGC--------------------------
-------------------------AGTACCATCCAAGCTGTAGGGTCGGCATGGTTTGTCTACG---------------
--CATATCTTCCCGCGTAGGGTCGCCAGTGAATCCGGTGTGCAGAGATCGCACTTGCTCCTG--------TCCACAACCC
ACGCTATATAATGAGACGCACATGCGTCGATCCGGACATCCTCCACTTC-CAC----ACTCACAAAACAATTCCACGCTC
CTCCATCTGTGCAAG-AAAGATGCCACCAGTG---CTCCTGCTCGTCCTGGCCGCCTCGCTCGTGGCGCTGCCGT-----
----CGTGCCAAAGCCTTCCGGTGCTCGCTCCGGTGACCAAGGACCCCGCCACCTCCCTCTACACAATCCCCTTCCACGA
CGGCGCCAGCCTCGTCCTCGACGTCGCCGGCCCGCTCGTCTGGTCCACGTGCGAGGGCGGCCAGCCGCCGGCGGAGATCC
CGTGCAGCAGCCCCACCTGCCTCCTCGCCAACGCCTACCCCGCCCCGGGCTGCCCAGCGCCCAGCTGCGGCAGCGACACG
CA---CGACAAG---CCGTGCACGGCGTACCCGTACAACCCGGTCACCGGCGCGTGCGCCGCCGGGAGCCTCTTCCACAC
CAGGTTCGCAGCCAACACCACCGATGGGAGCAAGCCGGTGAGCAAGGTGAACGTGGGGGTCCTGGCGGCCTGCGCGCCGA
GCAAGCTCCTGGCGTCGCTGCC----CCGGGGCTCCACGGGCGTGGCCGGGCTCGCGGACTCCGGCCTGGCGCTGCCGGC
GCAGGTGGCGTCCGCGCAGAAGGTCGCCAAAAGGTTCCTCCTCTGCCTCCCCACCGG--------CGGCCCTGGCGTGGC
CATCTTCGGCGGCGGCCCGCTCCCGTGGCCGC---------------AATTCACGCAGTCGATGCCGTACACGCCGCTCG
TCACCAAGGGCGGCAGCCCCGCACACTATATCTCGGCCAGGTTCATCGAAGTGGGGGACACCCGCGTCCCCGTATCGGAG
GGCGCGCTCGCCACCGGCGGCGTGATGCTCAGCACGAGGCTGCCCTACGCCGTGCTCCGCCGCGACGTGTACCGCCCGTT
GGTGGACGCGTTCACCAAGG-CCCTGGCGGCGCAGCATGCCAACGGAGCGCCCGTGGCGCGCGCAGTGGAGCCTGTGGCG
CCGTTCGGGGTGTGCTACGACACGAAGACGCTGGGCAACAACCTCGGCGGGTACTCGGTGCCCAACGTCCAGCTGGCGCT
CGATGGCGGGAGTGACACCTGGACGATGACCGGGAAGAACTCGATGGTGGACGTCAAGCCGGGGACGGCGTGCGTTGCGT
TCGTGGAGATGAAGGGGGTGGAGGCCGGCGACGGCAGGGCGCCGGCGGTGATCCTCGGAGGGGCCCAGATGGAGGACTTC
GTGCTCGACTTCGACATGGAGAAGAAGCGGCTCGGGTTTAGCAGGCTGCCGCACTTTACGGGTTGCGGCG----------
-----GCCTGTAATAATAAGTCTGTTTAACGACAG--TGTA---TTCGTCGACTACTGCATGTAATAAATAAGGGAA---
ACACTCTCTTCCATCAATGGTCTGATAAA---------AAGCAGTTATCAGACCTATCAGCGTCCGTCAATTCTGGTTGA
ATCTCACGGTCAAGATACCTCTTATCCGGTCGCCCTTT------------------------------------------
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--------AAAACAATCATGTCATTCGTAATGACCCGCATTGGTCGCCCATAACCCCCTCCAAAATCTCCCGCACGAATA
TCCTTCCGAGGCTCCGACCCTCCCCACTTCGTATCTCTTGCCTCACGCACCTCCCTAATCTCGCCGCCAACTGCACCGAC
CC--------CGTCCTATGCGATTGCGTTCCCCATTGCATGCTTCATCCACGCGTCCTCGTCAACCCCGT----------
------------------------------------------------------------------ACTACGCCGTCACT
AGGGCATTTTTAACCGATCCCCTAAA---AACACCCCCCCCCTCCCCCCCCCGCA--TCGTCTCCTCTGAGGCAACTCGG
GGGACAACCCTAGCCGCTGCATTTAGCCCCTTTCCCTCCCTTCCTCACCCCTTCACTGTCGCTAGAGGAGCCCATCGGCA
CGCCCGCGAGGCTCCGATGAAGGTGGCTGCGGGGATCCCGGTGGATCCACCCCGTGTGAAGGGCCTTGGCTTCCGGGGCG
GCGGCCCTGGGTGGCGGTGCGCGACATGGCCTGTGCGGCGGGCGGCGGCGGCGGGTGCAGGTGGGCTGCCTCCCTGGCCG
TGCGGGTAGCGCGAAGGTGTCGGGTGTCATCTGCTGCGGCAGCCCCTCGGGGTCT-GTGTGCCATGGAGAAGAGGCGTCC
TCAACTTCGAGCGCGTT-ACCCATGCCACGTCGACAGAGGGCCCAACCGGCTGGCAAGAAAAATACATTGGTGGTCCTAA
AAGTTTCTGAGCAGTGTCACTTTAGTCCTACTTCTTTCAACCTGCACGTTTAGGTCCTAATTCTACAGTAAGTGGCTCAC
CCAACATCCTTTTTCGCACAATCATTCACAGACCTGCTTGGTTGCATGTTG
>chr3A_499
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------------------CAAACAAACTGGAGATAGTTGCACTATTTTTTACCGCCTTTGATATACGAACAACACAAAAG
AACACGTGTGAGAATGTTGTGTACACATAAAATAATGTTGTA-AAGTTTCCCTAGTCGGTGGCCCACCAAATTTTACTCG
CGGCAGGAGAGAAGTGCTCGTAGTCAATTTCTAGCAGCCCTGCTTTTGCTCGGCCGCCGCACATAGGAAGCGGCGAGAAA
ACCT---AAAA------AAGAAGGAAGCGAGAAAGGAAAAGGAAAATCTTGTCGGTAATGGACTCCACACAGGTGGACGC
GGGTAGTC-CATTTTTGCGCGCCACTGGTGGGATCCAAGCGGCAGAGCGGTACACGTAGAGCCATTTGTGCGCGCCACTA
GTCAATTTCTGCAGAGCCATTTGTGAGTACCATCCAAGCTGTAGGGTCGGCATGGTTTGTCTACGCACATTGCATGTGCA
TGCATATCTTCCCGCGTAGGGTCGCCAGTGAATCTGGTGTGCAGAGATCGCACTTGCTCCTG--------TCCAGAACCC
ACGCTATATAATGAGACGCACACGCGTCGATCCAGACATCC---ACTTCACAC----ACTCGC-AAACAATTACACG---
CTCCATCTGTGCAAG-AAAGATGCCACCAGTG---CTCCTCCTCGTCCTGGCCGCCTCGCTCGTGGCGCTGCCGT-----
----CGTGCCAAAGCCTTCCGGTGCTCGCTCCGGTCACCAAGGACCCCGCCACTTCCCTCTACACAATCCCCTTCCACGA
CGGCGCCAGCCTCGTCCTCGACGTCGCCGGCCCGCTCGTCTGGTCCACGTGCGAGGGCGGCCAGTCGCCGGCGGAGATCC
CGTGCAGCAGCCCCACCTGCCTCCTCGCCAACGCCTACCCCGCCCCGGGCTGCCCCGCGCCCAGCTGCGGCAGCGACAGG
CA---CGACAAG---CCGTGCACGGCGTACCCATCCAACCCGGTCACAGGCGCGTGCGCCGCCGGGAGCCTCTTCCACAC
CAGGTTCGCAGCCAACACCACCGACGGGAACAAGCCGGTGAGCGAGGTGAACGTCGGGGTCCTGGCGGCGTGCGCGCCGA
GCAAGCTCCTGGCGTCGCTGCC----CCGGGGCTCCACGGGCGTGGCCGGGCTCGCGGCCTCCGGCCTGGCGCTGCCGGC
GCAGGTGGCGTCCGCGCAGAAGGTCGCCAACAGGTTCCTCCTTTGCCTCCCCACCGG--------CGGCCCTGGCGTGGC
CATCTTTGGCGGCGGCCCGGTCCCGTGGCCGC---------------AATTCACGCAGTCGATGCCGTACACGCCGCTCG
TCACCAAGGGCGGCAGCCCCGCACACTACATCTCGGCCAGGTTCATCGAAGTGGGGGACACCCGCGTCCCTGTATCGGAG
GGCGCGCTCGCCACCGGCGGCGTGATGCTCAGCACGAGGCTTCCCTACGCCTTGCTCCGCCCCGACGTGTACCGCCCGTT
GGTGGACACGTTCACCAAGG-CC-TGGCGGCGCAGCCTGCCAACGGAGCGCCCGTGGCGCGCGCAGTGAAGCCTGTGGCG
CCGTTCGGGGTGTGCTACGACACGAAGACGCTGGGCAACAACCTCGGCGGGTACTCGGTGCCCAACGTCCAGCTGGCGCT
CGATGGCGGGAGTGACACGTGGACGATGACCGGGAAGAACTCGATGGTGGACGTCAAGCCGGGGACGGCGTGCGTTGTGT
TCGTGGAGATGAAGGGGGTGGAGGCCGGCGACGGCAGGGCGCCGGCGGTGATCCTCGGAGGAGCCCAGATGGAGGACTTC
GTGCTCGACATCGACATGGAGAAGAAGCGGCTCGGGTTTAGCAGGCTGCCGCATTTTACGGGTTGCGGCG----------
-----GCCTGTAATAATAAGTCTGTTTAACGACAG--TGTA---TTCGTCGACTACTACGTGTAATAAATAAGGGAA---
ACAC---CTTCCACCAGTGGTATGAATCGTATGATAAGAAGCAGTCATCAGACCTATCGGCGTCCGTCGATTCTGGTTGA
ATCTCACGGTCAAGATACCTCTTATCCGGTCGCCCTTTAAAAAAAATAAGTTAAATACACTACAGGTGTTCTAACTTGTC
CGACGCGGTTAGTTTGGTGCCTAAACTTGAAAAATACACAAAAATGGTGTCGTAATTTATCTGGGCGTTCAAATACGGTG
CCTCTGGACATATGCCGCCGTATCGAGTGACCGTGTGGCATGCCAGCGTGTTGCCGGGCCACATGTCAGTGGTTGCAGGC
GCGACGCGTGCTGTTTTTTACAGGAATGACCCCATATTTTAATTAATTCTCACGAAAAATACCTCTTGATTTTAATTAAT
ACTCACAAAAAATAACAGAAAGCGAGCGTGCAGGGAATTCGAACATGGAATATCCTTGTTGCCTGACAATCGAGCGGACC
AGACGGCCACGGTCTGGTTTGCTCTTAATTGTCAGCCAACAATTTATATAGATGATTGCACGTATCGCTCTGCACATGCT
TCTACTGGAGTAATTTTATTTCTATTTATTTCCAAGTTACTATCTTATTTTTCTTCGGGTGAAGTTTCTGTTTAGTTTTC
ATGATACATAAATTTTTCCATATGAAAAAATAGAATAATTGTTAATATGAAATTTTGTTTATTTTATATCTCTATTCTAT
TTCCATCACTGTGTACTTTGAAGAGATAAAAATGATTTTTTTTCTAAAATTGATGTGGAATTAAAAAGTTGAACTTATAT
TAAAAACACAGTGGAGAATTTTTCTGAAATAAACATTCACGTTCACATTCATTTTCATATTATTTTAGAAAATGCTCACC
ATGTTTCTTGAAAATGTTGAATGCATATTAAAATAATATTGTGTAATATTATTCTTAAATTTCTACAAACCCGCTTAACA
TGTTAGTACAGTTCTAGAAATTATTATTGACACACAATAATATTTAATACATGTTGAACAGTTTTTAAAATACAATATTG
TCAATTTTAAATAATTGTTTATTTAAAAAATAGAATGAAGATACACAATAATTGTTCGTGCTTATGGTCCTCAATGAGGA
TGCATAAATTTACACAATAACTTTTAATATACGTTCAACTTTTTTGTCCACATTAATTTTAGAAAAAATCATGTTTATCT
CATCAAGGTACACAATAATGAAAATAGAATAAAGATGTAAAATAAAAAATAATTGCATATTGATAATTATTTTATTTTTC
ATATGGGAAAATTTATGTATCATGAAAATTAAACAGAAACTTTGCTCAAAAAAACCCAAAGCAGTACTTGAAAAAAACTG
TAGAAAACATGGGCAAAGCGATACATGGAATCGTGCATATAAGTTGCTAGCTAACCTTTCAACGTAAACCAAAGTGTGGC
CTCTTGATGTGCCTGTTTGATAGGCAACCAACAGGTCCGTTGTTCGAATTCTCTTCATGCCAACTTGTGTTTATATTTTT
GTGAGAATTAATTAAAGTATAGGCGCGTTTCGGTAGAAAAAACAGTGTGCATGCAGTGTCTGTAACGATTTTTCCAAGAA
TTAACTAAAGTTTAGAGGCATTTCTGTAAAAAAAACTACGCACAACTCACAATGCGCCCGCAGCAACTGACATGTGGACC
AGCGACACGATGGCATGCCACCCGGACACTTGATACGACGGCATACGCCCAGAGGCACCGTATTTGAACGACTAGACAAG
TTACGACATCACTTTGTGTATTTTTCAAGTTTAAGCACCAAACTGACCGCACCGGACAAGTTATGGCACATGTGGTGTAT
TTAACTCAAAAAAAATCATGTCGTTCGTAATGATCCGCATTCGCCGCCCATAACCCCCTCCAAAATCTCCTGCACGAATA
TCCCTCCGAGGCTCCGACTCTCGCCCCTTCTTATTTCTTGCCTCACGCACCTCCCTAATCTCGCCGCCAACTGCACCGAC
CCT--------GTCCTATGCGATTGCTTCCCCCATTGCATGCTTCATCCATGCATCCTCGTCGACCAAACCAGGCACCTC
ATTGCCCAGATTCATTCTTCTCCTCCTCCCCATCGATGCGGCCTCAGTTCATGTAGCAGTAGGTGCACTACGCCATCACT
AGGGCATTCCTAACCGATACCCTAA-------------CCTCCCCCCTCCCGGCGCGTCGTCTCCTCCGAGGCAACTCAT
GGGACAACCCTAGCCGCCATGTTTAGCCCTA---------------ACCCCTTCGCCGCCGCCAGAGGAGCCTATTGGTG
CACCCGCGGGGCTCTGATGAAGGTGGCGGCGGGGATCTCGGTGGCTCCACCCCGTGTGAAGGGCCTTAGCGTCTGGGGCG
GT-------------GGTGCACGACATGGCCTGTGCGGCGGGCGGCGGCGGCGGGTGCAGGTGGGATGCCTTCCTGGCCG
TGCGGGCAGCGTGAAGGCGGCGGGCGTCGTCTACTACGGCGGCCCCTCGCGGGTCAGTGTGCCATGGAGAAGAGGCGTCC
TCAACTTTGAGAGCGTTGACCCATGCCACGTCAACAGAGGGCCCAACCGGCTGGCAAGAAAAATACATTGGTGGTCCTAG
AAGTTTCTGGGCGGTGTCACTTTAGTCCTTCTTCTTTCAAACTGCATGTTTAGGTCCTAATTCTATAGTACGTGGCTCAC
CCGACGTCCTTTTCCGCATGATCATTCACATACCTGCTTGGTTGC------
>chr3B_572
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------------A---------------------ATGTTGTATAAGATTTCCTAGTCGGTGGCCCGCCAAATTTTACTCG
CAGCAGGAGAGAAGTGC---TAGTCAATTTCTGGTGGCCCTTCTTTCGCTCGACCGACGCACATAGGAAGGGACGACTGG
ACGAGAGTGTGAGTTTCGGCGCCTACAATCTGGTGG-----------------GGTAGTGGGCCCCAGATGCGTTGACTG
GATGCGAGTCCTTTCTGCGCGCAACTTGCGGGATCAGGTTGACGCGTAGGATCAGGTTGTCTAG----------------
-----------------------------------------------------------------------GCACATGCA
TGCATATATCCCGTGTACGCGTCGCCATTGAATCCCGTGTGCTGACTGCTGAGGTCGCACTCCAACATGCTCCGGAACCC
ACC--ATATAAAGAGACGCAGACGGTCCATT---------------------------------------------G---
GTCCATCTGTGCAAGCAAAGATGGCACGAGTCCTCCTTCTCCTCGTCCTGGCCGCCTCGCTCGCTGCGCTGGTGT-----
----CTTCCGAAGGTCTTCCGGTGCTCGCTCCGGTCACCAAGGACACGGCCACCTCCCTCTACACAATCCCCTTCCACGA
CGGAGCCAGCCTCGTCCTCGACGTCGCCGGCCTGCTCGTCTGGTCCACGTGCGAGGGCGGCCAGTCGCCGGCGGAGATCG
CGTGCAGCAGCCCCACCTGCCTCCTCGCCAACGCCTACCCCGCCCCGGGCTGCCCCGCGCCCACCTGCGGCAGCGACAGG
CA---CGACAAG---CCGTGCACGGCGTACCCATCCAACCCGGTCACCGGCGCATGCGCCGCCGGGAGCCTCTTCCACAC
CAGGTTCGCAGCCAACACCACCGACGGCAATAAACCGGTGAGCGAGGTGAACGTCCGGGTACTGGCGGCGTGCGCGCCGA
GCAAGCTCCTGGCGTCGCTGCC----GCGGGGCTCCACGGGCGTGGCCGGGCTCGCGGGCTCCGGCCTAGCGCTGCCGTC
GCAGGTGGCGTCCGCCCAGAAGGTCGCCAACAAGTTCCTCCTCTGCCTCCCCACCGG--------CGGCCCTGGCGTGGC
CATCTTCGGCGGCGGCCCGCTCCCTTGGCCGC---------------AATTCACGCAGTCCATGGACTACACACCGCTGG
TCGCCAAGGGGGGCAGCCCCGCGCACTACATCTCGGCCAGGTCAATCAAAGTGGAGAACACCCGCGTCCCCATCTCGGAG
CGCGCGCTCGCCACCGGCGGCGTGATGCTCAGCACTAGGCTGCCCTACGTCTTGCTCCGCCGTGACGTGTACCGCCCGTT
GGTGGACGCGTTCACCAAGGCCC-TGGCGGCGCAGCCTGCCAACGGAGCGCCGGTGGCGCGCGCAGTGAAGCCTGTGGCG
CCGTTCGAGCTGTGCTACGACACGAAGACGCTGGGCAATAACCCCGGCGGGTACTGGGTGCCCAACGTCCTGCTGGAGCT
TGACGGCGGGAGTGA---CTGGGCGCTGACCGGGAAGAACTCAATGGTGGACGTCAAGCCGGGGACGGCGTGCGTTGCGT
TCGTGGAGATGAAGGGGGTTGATGCCGGCGATGGCAGTGCGCCGGCGGTGATTCTGGGAGGAGCCCAGATGGAGGACTTC
GTGCTCGACTTCGACATGGAGAAGAAGCGGCTCGGGTTTCTCAGGCTGCCGCACTTTACGGGTTGC--------------
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>chr3B_577
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--------------------------------------TGTA-AAGTTTCCCCAGTCGGTGGCCCACCGAATTTTACTCG
CAGCAGGAGAGAAGTGCTACTAGTCAATTTCTAGTGGCCCTGCTTTTGCTCGGCCGCCGCACATTGGAAGCGGCGAGAAA
ACCTCAAAAAAGAAACGAAAAAGTAAGCGAG------AAAGAACAATCTTGTCGGTAGTAGA---------------CGC
GAGTAGTC-CATTTTTGCG----------------------GCAGAGCGGTAGC--------------------------
-------------------------AGTACCATCCAAGCTGTAGGGTCGGCATGGTTTGTCTACGGT-------------
---------------GTAGGGTCGCCGGTGAATCCGGTGTGCAGAGATCGCACTTGCTC---CAGAAGA--CCAGAACCC
ACGGTATATAATGAGACGCACATGTGTCGATCTAGACATCC---ACTTC-CAC----ACCCAC-AAACAATTCCACG---
CTCCATCTGTGCAAG-AAAGATGCCACCAGTG---CTCCTCCTCGTCCTGGCCGCCTCGCTCGTGGCGCTGCCGT-----
----CGTGCCAAAGCCTTCCGGTGCTCGCTCCGGTCACCAAGGACCCCGCCACCTCCCTCTACACAATCCCCTTCCACGA
CGGCGCCAGCCTCGTCCTCGACGTCGCCGGCCCTCTCGTCTGGTCCACGTGCGATGGCGGCCAGCCGCCCGCGGAGATCC
CGTGCAGCAGCCCCACCTGCCTCCTCGCCAACGCCTACCCCGCCCCGGGCTGCCCCGCTCCCAGCTGCGGCAGCGATAAG
CA---CGACAAA---CCGTGCACGGCGTACCCGTACAACCCGGTCAGCGGCGCGTGCGCCGCAGGGAGCCTCTCCCACAC
GAGATTCGTGGCCAACACCACCGACGGGAGCAAGCCGGTGAGCAAGGTGAACGTCGGGGTCCTGGCGGCGTGCGCGCCGA
GCAAGCTCCTGGCGTCGCTGCC----CCGGGGCTCCACGGGCGTGGCCGGGCTCGCGAACTCCGGCTTGGCGCTGCCGGC
GCAGGTGGCATCCGCGCAGAAGGTCGCCAACAGGTTCCTCCTCTGCCTCCCCACCGG--------CGGCCCTGGCGTGGC
CATATTTGGCGGCGGCCCGGTCCCGTGGCCGC---------------AATTCACGCAGTCGATGCCTTACACGCCGCTCG
TCACCAAGGGCGGCAGCCCCGCGCACTACATCTCGGCCAGGTCCATTGTAGTGGGGGACACCCGCGTCCCCGTACCGGAG
GGCGCGCTCGCCACCGGCGGCGTGATGCTCAGCACGAGGCTACCCTACGTCTTGCTCCGCCCCGACGTGTACCGCCCGTT
GATGGACGCGTTCACCAAGGCCC-TGGCGGCGCAGCATGCCAACGGAGCGCCCGTGGCGCGCGCAGTGGAGGCTGTGGCG
CCGTTCGGGGTGTGCTACGACACGAAGACGCTGGGCAACAACCTCGGCGGGTACGCGGTGCCCAACGTCCAGCTGGGGCT
CGATGGCGGCAGTGA---CTGGACGATGACCGGGAAGAACTCGATGGTGGACGTCAAGCAAGGGACGGCGTGCGTTGCGT
TCGTGGAGATGAAGGGAGTGGCGGCCGGCGACGGCAGGGCGCCGGCGGTGATCCTCGGAGGGGCCCAGATGGAGGACTTC
GTGCTCGACTTCGACATGGAGAAGAAGCGGCTCGGGTTTAGCAGGCTGCCGCACTTTACGGGTTGCGGCG----------
-----GCCTGTAATAATAAATCTGTTTAACGACAG-GTGGA---TTCGTCCACTACTGCGTGTAATAAATAAGGGAAGAA
ACAC---TTTCCATCAGTGGTTTCATAAG---------AAGCGGCCATCAGACCCATCGTCGTCCGTTGATTCTGGTTAA
ATCTCACGGTCAAGATACCTCTTATCCCGTCGCCCTTAAAAAAAATCATTCGCCTT------------------------
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------------------------------------------------CATAACCCCCTCCAAAATCTCCCGCACGAATA
TCCCTCCGAGGCTCCGACCCTCCCCCTTCATATC----------------------------------------------
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>chr3B_869
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----------------------------------CGGTGTGCAGAGATCGTACTTGCTCGCTCGGTAGA--ACCCAACCC
ACTATATA-AATGAGACGCACACGCGTCGATCCAGACATCC---AGTTC-CACTCTGACAAACAAGAGTATTCCACT---
GCCCATCTGTGCAAGCAAAGATGGCACGACTG---CTCCTCCTCGTCCTGGCCACCTCACTCGTTGCGCTGGCGT-----
----CGTGCCAACGTCTTCCGGTGCTCGCACCGGTCACCAAGGACCCCGCCACCTCCCTCTACACAATCCCCTTCCACCA
GGGCGCCAGCCTCGTCCTTGACATCGCCGGCCCGCTCGTTTGGTCCACGTGCCAGCGCGGCGATCTGCCGACAGACATCC
CGTGCAGTAGCCCCACCTGCCTCCTTGCCAACGCCTACCCGGCCCCGGGCTGCCCCGCGTCCAGCTGCGGCAGCGACAGG
CA---CCACAAG---CCGTGCAAGGCGTACCCATACAACCCGGTCACCGGCGCCTGCGCCGCCGGGAGCCTCGCCCGCAC
GACGCTCGTAGCCAGCACCACCAACGGGAATTACCCGGTGAGCGAGGTGAACGTCCGGGTCCTGGCGGCGTGCGCGCCGA
GGAAGCTCCTGGCGTCGCTGCC----CCGGGGCTCCACTGGCGTGGCCGGGCTCGGGGGCTCCGGCCTGGCGCTGCCGGC
TCAGGTGGCGTCCACCCAGAAGGTCGACAACAAGTTCCTCCTCTGCCTCCCCAGCGG--------CGGCCCTGGCGTGGC
CATCTTCGGCGGCGGCCCGCTCCCGTGGCCGC---------------AATTGACGCGATCGATGCCGTACACGCCGCTCG
TCACCAAGGGCGGCAGCCCCGCGCACTACATCTCCGTCAAGGCCATCCAAGTGGAGGACACCCGCGTCTCCGTCTCAGAG
CGCGCGCT------------CGTGATGCTCAGCACGAGGCTGCCCTACGCCATGCTCCGCCGGGACGTGTACCGCCCATT
GGTGGACGCGTTCACCAAGGCCC-TAGCGGCGCAGCCTGCCAACGGAGCGCCCGTGGCGCGCGCCGTGAAGCCTGTGGCG
CCGTTCGAGCTGTGCTACGACACGAAGTCGCTGGGCAACAACCCCGGCGGGTACTGGGTGCCGAACGTCGGGCTGGCGCT
CGACGGCGGGAGTGA---CTGGTGGATGACTGGGAAAAACTTCATGGTGGACGTCAAGCCGGGGACGGCGTGCGTTGGGT
TCGTGGAGATGAAGGGGGTGGATGCCGGCGCCGGCAGGGCGCCGGCGGTGATACTCGGAGGAGCCCAGTTGGAGGAACTC
GTGCTCGACTTCGACATGGAGAAGAAGCGGCTCGGGTTTCTCAGGCTGCCACACTATATGGATTGC--------------
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>chr3D_966
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----------------------------------------------------------------AAATAATTCCACG---
GTCCATTGGTGCCAGCAAAGATGGCACGAGTC---CTCCTCCTCGTCCTGGCCGCCTCGCTCGCTGCGCTGGCGT-----
----CGTCCAAAGGTCTTCCGGTGCTCGCTCCGGTCACCAAGGACACCGCTACCTCCCTCTACACAATCCCCTTCCACGA
CGGCGCCAACCTCGTCCTCGACGTCGCCGGCCCGCTCGTCTGGTCCACGTGCGACGGCGGCCAGCCGCCGGCGGAGATCC
CGTGCAGCAGCCCCACCTGCCTCCTCGCCAACGCCTACCCTGCCCCGGGCTGCCCCGCGCCCAGCTGCGGCAGCGACAGG
CA---CGACAAG---CCGTGCACGGCCTACCCATACAACCCGGTCACCGGCGCGTGCGCCGCCGGGAGCCTCTTCCACAC
GAAGTTCGTGGCCAACACCACCGACGGGAATAAACCGGTGAGCAAGGTGAACGTCGGGGTCGTGGCGGCGTGCGCGCCGA
GCAAGCTCCTGGCGTCGCTGCC----CCGGGGCTCCACGGGCGTGGCCGGGCTCGCGGACTCCGGCCTAGCGCTGCCGGC
GCAGGTGGCGTCCGCGCAGAAGGTCGCCAACAGGTTCCTCCTCTGCCTCCCCACCGG--------CGGACTTGGCGTGGC
CATCTTCGGCGGCGGCCCGCTCCCGTGGCCGC---------------AATTCACACAGTCCATGGACTACACCCCGCTCG
TCGCCAAGGGAGGTAGCCCCGCGCACTACATCTCCCTCAAGTCCATCAAAGTGGAGAACACCCGCGTCCCCGTATCGGAG
CGGGCGCTCGCCACCGGCGGCGTGATGCTCAGCACGAGGCTGCCCTACGTCTTGCTCCGCCGCGACGTGTACCGCCCGTT
CGTGGACGCGTTCACCAAGGCCC-TGGCGGCGCAGCCTGCCAACGGAGCGCCCGTGGCGCGCGCCGTGAAGCCTGTGGCG
CCGTTCGAGCTCTGCTACGACACGAAGTCACTGGGCAACAACCTCGGCGGGTACTGGGTGCCGAACGTTGGGCTGGCAGT
CGACGGCGGGAGTGA---CTGGGCGATGACCGGGAAGAACTCGATGGTGGACGTCAAGCCGGGGACGGCGTGCGTTGCGT
TCGTGGAGATGAAGGGGGTGGAGGCCGGCGACGGCAGGGCGCCGGCGGTGATCCTCGGAGGAGCCCAGATGGAGGACTTC
GTGCTCGACTTCGACATGGAGAAGAAGCGGCTCGGGTTTAGCAGGCTGCCGCAATTTACGGGTTGC--------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------
>chr3A_979
CTCCGT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CCACTAGTGCGAGCAAAGATGGCACGGGTC---CTCCTCCTCGTGCTGGCCGCCTCGCTCGTTGCGCTGGCGT-----
----CGTCCAAAGGCCTTCCGGTGCTCGCGCCGGTCACCAAGGACACCGCCACCTCCCTCTACACCATCCCCTTCCACGA
CGGCGCCAGCCTCGTCCTCGACGTCGCCGGCCCGCTCGTCTGGTCCACGTGCGAGGGTAGTCAGCCGCCGGCGGAGATCC
CGTGCAGCAGCCCCACCTGCCTCCTCTCCAACGCCTACCCCGCCCCGGGCTGCCCCGCGCCAAGCTGCGGCAGCGACAGG
CA---CGACAAG---CCGTGCACGGCGTACCCATCCAACCCGGTCACCGGCGCGTGCGCCGCCGGGAGCCTCTTCCACAC
GAAGTTCGCAGCCAACACCACCGACGGGAATAAACCGGTTAGCGAGGTGAACGTCGGGGTCCTGGCGGCGTGCGCGCCGA
GCAAGCTCCTGGCGTCGCTGCC----CCGGGGCTCCACGGGCGTGGCCGGGCTCGCGAACTCCGGCCTAGCGCTGCCGGC
GCAGGTGGCGTCCACGCAGAAGGTCGCCAACAGGTTCCTCCTCTGCCTCCCCACCGG--------CGGCCTTGGCGTGGC
CATCTTCGGCGGCGGCCCGCTCCCGTGGCCGC---------------AATTCACGCAGTCCATGGACTACACCCCGCTCG
TCGCCAAGGGCGGCAGCCCCGCGCACTACATCTCGCTCAAGTCCATCAAAGTGGAGAACACCCGCGTCCCCGTATCGGAG
CGGGCGCTCGCCACCGGCGGCGTGATGCTCAGCACGAGGCTGCCCTACGTCTTGCTCCGCCGCGACGTGTACCGCCCGTT
CGTGGGCGCGTTCACCAAGGCCC-TGGCGGCCCAGCCTGCCAACGGAGCGCCCGTGGCGCGCGCCGTGAAGCCTGTGGCG
CCGTTCGAGCTCTGCTACGACACGAAGTCGCTGGGCAACAACCTCGGCGGGTACTGGGTGCCGAACGTTGGGCTGGCAGT
CGACGGCGGGAGTGAC---TGGGCGATGACCGGGAAGAACTCGATGGTGGACGTCAAGCCGGGGACGGCGTGCGTTGCGT
TCGTGGAGATGAAGGGGGTGGAGGCCGGCGACGGCAGGGCGCCGGCGGTGATCCTCGGAGGAGCCCAGATGGAGGACTTC
GTGCTCGACTTCGACATGGAGAAGAAGCGGCTCGGGTTTCTCAGGCTGCCGCACTTTACGGGTTGCGGCAGCTAGAGCTT
TCACTGCCTGTAATAATAAGTCTGTTTATTACTGTACAATGTACTTCGTCGACTACGGCATGTAATAAATAAG-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------
>chr3D_981
CC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CCCACTGGTGCGAGCAAAGATGGCACGGGTC---CTCCTCCTCTTGCTGGCCGCCTCGCTCGTTGCGCTGGCGT-----
----CGTCCAAAGGTCTTCCGGTGCTCGCTCCGGTCACCAAGGACACCGCCACTTCCCTCTACACAATCCCCTTCCACGA
CGGCGCCAGCCTCGTCCTCGACGTCGCCGGCCCGCTCGTCTGGTCCACGTGCGACGGCGGCCAGCCGCCGGCGGAGATCC
CGTGCAGCAGCCCCACCTGCCTCCTCGCCAACGCCTACCCCGCCCCGGGCTGCCCCGCGCCCAGCTGCGGCAGCGACAAG
CA---CGACAAG---CCGTGCACGGCGTACCCGTACAACCCGGTCACCGGCGCGTGCGCCGCCGGGAGCCTCTTCCACAC
CAGGTTCGCAGCCAACACCACCGACGGGAGCAAGCCGGTGAGCAAGGTGAATGTCGGGGTCCTGGCGGCGTGCCCGCCGA
GCAAGCTGCTGGCGTCGCTGCC----CCGGGGCTCCACGGGCGTTGCCGGGCTCGCGGACTCCGGCCTGGCGCTGCCGGC
GCAGGTGGCGTCTGCGCAGAAGGTCGCCAACAGGTTCCTCCTCTGCCTCCCCACCGG--------CGGCCCTGGCGTGGC
CATCTTTGGCGGCGGCCCGGTCCCGTGGCCGC---------------AATTCACGCAGTCGATGCCGTACACGCCGCTCG
TTACCAAGGGCGGCAGCCCCGCACACTACATCTCGGCCAGGTTCATCGAAGTGGGGGACACCCGCGTCCCCGTATCGGAG
GGCGCGCTCGCCACCGGCGGCGTGATGCTCAGCACGAGGCTGCCCTACGCCGTGCTCCGCCGCGACGTGTACCGCCCGTT
GGTGGACGCGTTCACCAAGGCCC-TGGCGGCGCAGCATGCCAACGGAGCGCCCGTGGCGCGCGCAGCGGAGCCTGTGGCG
CCGTTCGGGGTGTGCTACGACACGAAGACGCTGGGCAACAACCTCGGCGGGTACTCGGTGCCCAACGTCCAGCTGGGGCT
CGATGGCGGGAGTGACACCTGGACGATGACCGGGAAGAACTCGATGGTGGACGTCAAGCCGGGGACGGCGTGCGTTGCGT
TCGTGGAGATGAAGGGGGTGGAGGCCGGCGACGGCAGGGCGCCGGCGGTGATCCTCGGAGGGGCCCAGATGGAGGACTTC
GTGCTCGACTTCGACATGGAGAAGAAGCGGCTCGGTTTTAGCAGGCTGCCGCACTTTACGGGCTGCGGCG----------
-----GCCTGTAATAATAAGTCTGTTTAACGATATAGTGTA---TTCGTCGACTACTGCGTGTAATAAATAAGGA---AA
ACAC---TTTCCATCAAAGGTCTGATAAG---------AACCAGTCATCAGACCCATCGTCGTCCGTCGATTCTGGTTGA
ATCTCACGGTCAAGATACCTCTTATCCAGTCGCCCTTTAAAGAAA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------AATCATGTCATTCCTAATGACCCGCATTCGCCGCCCATAACCCCCTCCAAAATCTCCCGCACGAATA
TCCCTCCTAGGCTCCGACCCTCTCCCCTCCGTATCTCTTGCCTCACACACCTCCCTAATATCGCCGCCAACTGCACCGAC
CTCGCGTCCTCGTCCTATGCGATTGCGTCCCCCATTGCATGCTACATCCACGCGTCCTCGTCGACCAAACCAGGCACCTC
AACGCCCAGATTCATTCTCCTCCTCCTCCCCATTGATGCGGCCTCAGTTCATGTAGCAGTAGGTGCACTACGCCGTCACT
AGGGCATTTCTAACCGATCCCCTAAAAACAACCCCCCCCCCCTCCCACCCCACCGCGTCGTCTCCTCTGAGGCGACTCGG
GGGACAACCCTAGCCGCCGTGTTTAGCCCCCTCCCCTCCCTTCCCCACCCCTTCGTCGCCGTCAGAGGAACCCATCGGCA
CGCCCGCGGGGCTCTGATGAAGGTGGCAGCGGGGAACTCGGTGGCTCCACCCCGTGTGAAGGGGCTTGGCTTCCGGGGCG
CCGGCCCCGGGCGGCGGTGCGCGACGTGGCCTGTGCGGCGGGCGGCGGCGGCGGGTGCAGGTGGGCTGCCTCCATGGCTG
TGCGGGCAGCGTGAAGGCGGCAGGCGTGGTCTGCGGCGGTGGCCCCTCGCGGACG-ATGTGCCATGTAGAAGAGAC--CC
TCAACTTCGAGTGCGTTGACCCATGCCACGTCGACAGAGGGCCCAACCGGCTGGCAAGAAAA-TACATTGGTGATCCTAA
AAGTTTTTGGGTAGTGTCGCTTTAGTCCTACTTCTTTCAAACTGCACGTTTAGGTCCTAATTCTACTGTAAGTGGCTCAC
CCGATGTCCTTTTTCGCACGATCATTCACAGACCTGCTTGGTTGC------
>chr3D_992
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------GCAAG-GAAGATGGCACTGGTA---GCCCTCCTCGTCCTGGCAGCCTC---------ACTGGCCTGGCCG
GCGTCGAGCCAGCGTCTGCCGGTGCTTGTTCCGGTGACCAAGGACCCCGCCACCTCCCTCTACACGCTCCCGTTCCACAA
CGGCGCCAACCTCGTCGTCGACATCGCCGGCCCGCTCGTCTGGTCCACGTGCCAGCCCGGCCATCTGCCGGCCAAGTTCC
CCTGCACGTTCCCCACCTGCCGCCTTGCCAACGCCTACCCCGTCCCCGGCTGCCACGAGCCAGGCTGTGAGCAGGAGAGG
CG---CAAGGACGGCACGTGCACGGCGTACACGTACAACCCGGTCACCGGCGTGTGCGCCTCCGGGAGCCTCGACCGTAC
CAGGTTCGTGGCCAACACCACCGACGGGAGTAACCCGGTGAGCCAGGTGAACGTCATGGCAGTGGCGGCGTGCGCGCCGG
AGACGCTGCTGGCGTCCCTGCC----CCGTGGCTCCACGGGCGTGGCCGGGCTCGCGGGTTCCGGCCTGGCGCTGCCGGC
GCAGGTGGCGTCCGCGCAGAAGGTCGCCAACAAGTTCCTGCTCTGCCTCCCCCGCGG--------CGGCGACGGCGTGGC
CATCTTCGGCGGCGGCCCGCTCCACATCCACTCGCAATCGGAGGTCGACTGGACGCAGTCGCTGGATTACACGCCGCTGG
TCCAAAGGAATGGCAACCCGGCGTACAGCGTCTTGGTCAAGTCCATCACCATGGACAACACGCGTGTGTCAGTCCCGGAC
AGCGCGCTCGCCACCGGCGGTGTGCTGCTCAGCACGACGGTGCCCTACACCTCGCTACGCCGCGATGTGTACCGCCCGTT
CGTGGACGCGTTCGCCAAGGCCG-TAGTGGCGCAGAGTCAGCACGGCTGGCCCGTGGCGCGCGTGGTGAAGCCCGTGGCT
CCGTTCGAGCTGTGCTACGATTCAGGGACGCTGATCAGCGGGCGGGGCGGCTATTTCGTGCCGGGCGTGACGTTGACGCT
GGACGGCGGGAAGAAC---TGGACGATGTTCGGGGGTGGCTCGATGCTGAACGTGGAGCCGGGGACAGCGTGCCTTGCGT
TCGTGGAGATGAAGGGAGTGAAGGCCGGAGACGGCAGGGCGCCGGCGGTGCTCATCGGAGGGTTCCAGATGGAGAACTTC
CTGCTGGAGTTCGACATGGAGAAGAATCAGCTCGGGTTCTTCAGGCTGCCG-----------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>chr3B_992
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------GCAAG-AAAGATGGCACGA------CTCCTCCTCATCCTGGCCGCCTCGCTGGTCGCACTGGCGTGGCCG
GCGTCGTGCCAACGTCTTCCGGTGCTCGCCCCGGTCACCAAGGATCTCGCCACCTCCCTCTACACCCTCCCCTTCCACGA
CGGAGCCAATCTCGTCGTCGACATCGCCGGCCCGCTCGTCTGGTCCACCTGCCAGCGTGACCACCTGCCGGCGGAGCTCC
CGTGCAAGAGCCCCACCTGCCGACTCGCCAACGCCTACCCCGTCCCGGGCTGCCACGCGCCCGGCTGCGGCCGCGATTGG
CACGGCGACAGG---ACGTGCACGGTCTACCCGTACAACCCGGTCACCGGCGCGTGCGCTGCCGGGAACCTCGTCCACAC
AAGGTTTGTCGCCAACACCACCGACGGGAGGAACCCGGTGAGCCAGGTGAACGTCAGGGCCGTGGCGGCGTGCGCGCCGA
GGAAGCTCCTGGCGTCGCTGCC----CCGGGGCTCCACGGGCGTTGCCGGGCTGGCGGGCTCCGGCCTGGCGCTTCCGGC
GCAGGTGGCGTCCACGCAGAAGGTCGCCAATAAGTTCCTCCTCTGCCCCCCCGCGGCGGCGCCAACGGCGACGGCGTGGC
CATCTTCGGCGGCGGCCCGCTTCACTTCTGGGTGGACCCGTCG---GACTACACGCAGTCGATGGACCACACCCCGCTCG
TCACCAAGCAGGGCAGCCCGGCGCACTACATCTCGGTCAAGTCCATTAGCATGGACAACACCCGCGTCCTCGTCTCCGAG
CGCGCGCTCGCCACGGGCGGCGTGATGCTCAGCACGAGGGTGCCCTACGCATTGCTCCGGCGGGACGTCTACCGCCCGTT
CGTGGACGCGTTCGTCAAGGCCC-TGGCGGCGCAGGCTGCGCCAGGAGGGCCCGTCGCGCGCGCGGTGAGGCCTGTGGCG
CCGTTCGAGCTGTGCTACGACGCGCAGACGCTGGGCAACACGAGGTTCGGGTACTGGGTGCCGAGCGTCACCCTGGCGCT
CGACGGCGGGAGGGAC---TGGAGGATGGCCGGGGTGAACTCGATGGTGGACGTCGAGCCGGGGACGGCGTGCCTTGCGT
TCGTGGAGATGAAGGGGGTGAAGGCCGGGGACGGCAGGGCGCCGGCGGTGATCGTGGGAGGGCTCCAGATGGAGAACATC
GTGCTGGAGTTCGACATGGAGAAGAAGCGGCTCGGGTT------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>chr3D_1088
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AAGGACCCCGCTACCTCCCTCTACACAATCCCCTTCCACCA
GGGCGCCAGCCTCGTCCTTGACATAGCCGGCCCGCTGGTCTGGTCCACGTGCCAGCGCGGCGATCTGCCGACAGATATCC
CGTGCAGTAGCCCCAGCTGCCTCCTCGCCAACGCCTACCCCGCCCCGGGCTGCCCCGCGCCCAGCTGCGGCAGCGGCAGC
CA---CGACAAG---CGGTGCACGGCGTACCCATACAACCCGGTCACCGGCGCGTGCGCCGCCGGGAGCCTCGCCCGCAC
GACGCTCGTAGCCGACACCACCGACGGGAATAACCCGGTGAGCGAGGTGTACGTCCGGGTCCTGGCGGCGTGCGCGCCGA
GGAAGCTCTTGGCGTCGCTGCCCGGCCCGGGGCTCCACGGGTGTAGCCGGGCTCGGGGGCTCCGGCCTTGCGCTGCCGGC
TCAGGTGGCGTCCACCCAGAAGGTCGCCAACAAGTTTCTCCTCTGCCTCCCCAGCGG--------CGGCCCTGGCGTGGC
CATCTTCGGCGGCGGCCCGCTCCCGTGGCCGC---------------AATTGACGCAGTCGATGCCGTACACGCCGCTCG
TCACCAAGGGCGGCAGCCCCGCGCACTACATCTCCGTCAAGGCCATCCAAGTGGAGGACACCCGCGTCTCCGTCTCAGAG
CGCGTGCTCGCCACCGGCGGCGTGATGCTCAGCACGAGGCTGCCCTACGCCTTGCTCCGCCACGACGTGTACCGCCCGTT
GGTGGACGCGTTCACCAAGGCCC-TGGCGGCGCAGCCTGCCAACGGAGCGCCCGTGGCGCGCGCCGTGAAGCCTGTGGCA
CCGTTCGAGCTGTGCTACGACACGAAGTCGCTGGGCAACAACCCCGGCGGGTACTGGGTGCCGAACGTCGGGCTGGCGCT
CGACGGCGGGAGTGAC---TGGTGGATGACTGGGAAGAACTTCATGGTGGACGTCAAGCCGGGGACGGCGTGCGTTGCGT
TCGTGGAGATGAAGGGGGTGGAGGCCGGCGACGGCAGGGCGCCGGCGGTGATCCTCGGAGGAGCCCAGTTGGAGGAGCTC
GTGCTCGACTTCGACATGGAGAAGAAGCGGCTCGGGTTTCTCAGGTTGCTACACTATATGGATTGC--------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>SNPs
S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------S---S--S----S------------SSS--------S-------------------
--S-----------------------------------------S-----------------------------------
----------------S----S-------------------------------S--------------------------
----S---S-------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-------SSS---------------------------------SSS
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S----------------------S-
--------------------------------------------------------------------------------
------------------------S-----------------------------S--------------S----------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----SSS---------------------S----------------S------------S---------S-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------S----------------------------S-S------------------------------------
---S---------------------S------------------------------------------------------
----------------------------S---------------------------------S---SSSS----------
--------------------------------------------------------------------------------
---------S----------------------S------------------S--S-------------------------
-----------------S-SS---------S-S-----------S---------S-S-S---S-----------------
--------S-----S------------S---------S------S-----------------------------------
-------S---S--------------------------------------------------------------------
------S----S-----S-S----S---S-----------S--------S--S-S-------------------------
-----------S--------------------------------------------------------------------
---------S------------------------------S---------------------------------------
--S--S-------------S-------------------------SSSSSS
>forward_448
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GGCCAACTAAACATGCGAGC--------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>reverse_2539
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------AGCGTCCGTCAATTCTGGTT--
--------------------------------------------------------------------------------
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---------------------------------------------------
