>input_sequence_57395
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-------------------------ATGACGGGGAAGGGGGTGCGGCGGAGGGAGAAGAACTACCGGGCGGCGCACGGGG
GCGACGCGCGGCTGCCCCCGCCGCCCAAGCAGCGGGAGCTCGAGGCGCTCCCCTCCAAGCTCCGCCGCCTCATCGCCATC
CAGAAGAAGCAGGACGGCGCCACCACCGGCGGAGGCAAGGCCGACGCTTCCTCAGGTGAGCTTCCCTTACCCCCCATAC-
CTCCTCTCCTACGGCCGCGGCAGCGCTGGCCCGCTAACCGTCTCGCTCGTTGCCCAGGACCAGGAGGGGCTCCCCGGAAG
CACGGCACCGATGCGACGGCCAAGGACAAGGCGGGGAAGGATAAGGTAA-------------------------------
--TG----------------------------------TGCTTAACACAATTCGTCTTGCAAAATTAGCTT-CTGTCGCC
TGTGCCATTGTGATTTAGTGGCTGGTGAATGATTGTGCAGAAAACCAAGAAGCCGGCATTGGAGGCTGCCGCGGATGCCA
AGGCAGCAGAGGGTGCACCGGCGGCCGACGAGAACGCGAACGCCGACGGTGGAAAGAAGAAGAGGAAGCGGGGGAAGGTC
GAGGATCTCCGTTTCAAGGAGCTCGAGGCGAATGTCTCGGTTTCCAAGAAGCAGAAAAGGAAGAAGTGAGTTGCCTAGCC
ATTTGATGTGTCCTGGTTTACCTGGCTCGGATCGTGTAGCCTTCTGCATCAATTTGTTTTGTTTCTATGTTGCCTGGTGC
AAATAAAATGCCATGTACACAGTATCTTGCTTCAAGTGATGCTAAGTTAATCGCATACGTTTTGGAACTAGGGCAAATGC
TCTAGTGTAGTAGGCACCTGCTTAAGAAAACCT-CACATTCACTCGTAGCAACGTATAATGAATGGATGATAAAATATAT
TGTGTCATTGGTTGCAGACATCTGGATGAGAAGAAAAAGAAGCGCAAGGCTGGTAAGTCCGAGACTCATCTGGAATTCCC
TGGGCGTGAAAAGGTCAAATTTGGTGATATTGTTGAGGCTCCACCAAAGCTATCATTCCCAAAGGTGCCCTCTTTTCTCA
TGTCCCTCTATGTGAACTCATTTACTTTGTTATTTCGTGGATTAAATGTATTGTTCTTGGCTTTGTAGCGGAAGAGTCAT
TTGGATGTTTCTGCTGAGAGGCTAAGGAAAGAGGTGGTTGAGAATTACAGAAACATCAAAGGCTGGACATCAAGGCCCGG
TCTCCAGCTTCCCACTCTAGCTGAATAA----------------------------------------------------
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>chr4A_1_TraesCS4A01G425000
TCCAGCCTATACCCACCTTGGTCTATCCCAGCTCCTCCCCTGTC-CTATCCTATTTGCACC------ATGATCTCTACTT
ACCCATGTTGCTCCCAAACGCTGTTTGTTTCTAAGCAATCCTAACAGAGA--ACTAGCTAGACACGAGAAAGTCGCATGC
ATTTCAGTTCAGGAAACACCTTAAAATTGCAT--AATTCAGACTGTTACTACTGCCAATCAAGTCCGGAGGGTCATAAAA
GTAGAATTAAGGGGCATCCAGATCACCTTGGCCTTGGTCGCCTCGTCGACGATGTCGGCTTTGAACTTGAGGAACCCCAC
GCGCTCCCCGAACATGTCCACCCCCTGCACGCATCAG----------ATTCAGATGTGCCATCCGTCCACTAATCCCCCA
ACGAAATCGTTATTAGAGCTCAAACATTTCGATGCGGGAG-----AAAGAGGGGAGCACCAGCCACCGCACCTGGATGAG
GATCTGCCGGAGGCTGAGCTTCCCGTGGGCGAGCAGGCCCCTCTCCCCCTGCAGGCTCTCCAACCAGCGCCGGAACAGCG
CCGAGTCCAGCGCCTTCCTGAAGTCCGCCTCGGGGAGGCCCGCCGCCGCCACGACCCGCACGGGCCCCGCCGCGCCGGGC
ACCTCCACGGTGGCGGCGCCGAGCTGCGG---------CGCGTCTGACGAGGCCATGCGCACGGCCGTCTTGCTGCTCCG
GCCGGGGAAGGG----------GAGGAGAGGCA---GCGGCGGCGAGCGGCGACGGAGGCCAAGCAGACAGTG------T
GCTGCCGCACGTGTCGCCGCGGCCATTTCTGCTGCT---GGAAGCCTCGCCGGGCACGCGAGCCATGTGCCACTTATCAT
GGGCCGGTCCGGGCCGGGCCGAGGAAGCCCAGA----GTGCCAATTCCGG-CCCAACGGCCCGCTCGGGGGGCTGTAACC
TCGCCTCCTC---TGTTCTAACCCCGCGTGGCAGTAGCGGCGGCGGCGGAAACAAACCAAGCAGTAGTGAGAGCGGCGGC
GGCGGCGGCGGAGGAGGAGGAGGAGATGACGGGGAAGGGGGTGCGGCGGAGGGAGAAGAACTACCGGGCGGCGCACGGGG
GCGACGCGCGGCTGCCCCCGCCGCCCAAGCAGCGGGAGCTCGAGGCGCTCCCCTCCAAGCTCCGCCGCCTCATCGCCATC
CAGAAGAAGCAGGACGGCGCCACCACCGGCGGAGGCAAGGCCGACGCTTCCTCAGGTGAGCTTCCCTTACCCCCCATAC-
CTCCTCTCCTACGGCCGCGGCAGCGCTGGCCCGCTAACCGTCTCGCTCGTTGCCCAGGACCAGGAGGGGCTCCCCGGAAG
CACGGCACCGATGCGACGGCCAAGGACAAGGCGGGGAAGGATAAGGTAA-------------------------------
--TG----------------------------------TGCTTAACACAATTCGTCTTGCAAAATTAGCTT-CTGTCGCC
TGTGCCATTGTGATTTAGTGGCTGGTGAATGATTGTGCAGAAAACCAAGAAGCCGGCATTGGAGGCTGCCGCGGATGCCA
AGGCAGCAGAGGGTGCACCGGCGGCCGACGAGAACGCGAACGCCGACGGTGGAAAGAAGAAGAGGAAGCGGGGGAAGGTC
GAGGATCTCCGTTTCAAGGAGCTCGAGGCGAATGTCTCGGTTTCCAAGAAGCAGAAAAGGAAGAAGTGAGTTGCCTAGCC
ATTTGATGTGTCCTGGTTTACCTGGCTCGGATCGTGTAGCCTTCTGCATCAATTTGTTTTGTTTCTATGTTGCCTGGTGC
AAATAAAATGCCATGTACACAGTATCTTGCTTCAAGTGATGCTAAGTTAATCGCATACGTTTTGGAACTAGGGCAAATGC
TCTAGTGTAGTAGGCACCTGCTTAAGAAAACCT-CACATTCACTCGTAGCAACGTATAATGAATGGATGATAAAATATAT
TGTGTCATTGGTTGCAGACATCTGGATGAGAAGAAAAAGAAGCGCAAGGCTGGTAAGTCCGAGACTCATCTGGAATTCCC
TGGGCGTGAAAAGGTCAAATTTGGTGATATTGTTGAGGCTCCACCAAAGCTATCATTCCCAAAGGTGCCCTCTTTTCTCA
TGTCCCTCTATGTGAACTCATTTACTTTGTTATTTCGTGGATTAAATGTATTGTTCTTGGCTTTGTAGCGGAAGAGTCAT
TTGGATGTTTCTGCTGAGAGGCTAAGGAAAGAGGTGGTTGAGAATTACAGAAACATCAAAGGCTGGACATCAAGGCCCGG
TCTCCAGCTTCCCACTCTAGCTGAATAAACACCCGTGTAACCATTTATCTTGTGCCTTCTTATGCTAGATCAGAGTTGCT
TATATATAACAACTTGCGCACTCTCTTGTAAGCAATTGTGAAACGTTATATTGTTGTTTGATTCGAGGTTGTGTGTTCTG
TTTTGCTTCCCTAAAGCAATTATTATATCATTAT-GGGTAATCGGGAATTCTGGGATTAGGAAAACGTATTATTTGCTTT
TGGAATGGGAATAGGAGCATAAACTCATGCTACTTTGTTGTTCTTC-----GCGAGAACTGGACGTTATTATTACAACTT
GTCAAAAGAGTAGCTGTTGGAGATGTACATATGACAGTACGCTCAGAAAAGATCTAGTAGCTTGTTCGGGTGTTCAAGCT
GAAATATTACGGGGGTACACAAAAATATGAAGGCCTTGATCCATATGGAGAGTAAACATTGTTTTGTATACTGGACTCTT
GGATTCATCTTCCAGTTTGAACCTGAAGAAATGTATCAGGGTAGCAGCCATGATTTTCATCTGCCTGTATGCAAATTCTT
TCCCCAAGCATATACGTGGGCCCGCCTGATCATGGAAAGAAGACTTATTAAATGGTGAAAATTGCCATCTGAACTCTAAA
GGAAAAATAGAACTATCTTTGCTTGTGTTTTTGACTTGAGAACTGATGTTAACACGGGCAGAC-TTTTTTATTAGTTTGT
GTGTAAGTGATTGATGTCAGTTGCAGTACTTTCTGAAAGCACATCCATTAGCAATTAGTTACCATGTTGTTTCC------
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------------------------------TACTTTATTTGTAAATAAAATGCTTGATTTTCTGTCTTAGCAACAGAAGG
GTCATATTTAAATACCAGCAATGTGACTTTTTAATTTTTTTTTCACCAAGTACCAACTTATAGTGATATTCTCGCCTGTG
CCTGGC-TAACCCAATTTGTCAGAGTTGGACATGCTCACTGAATAAAATTATAGGCCTTATAAACATGTGCAGAGATTAT
TTCTCAAGTAATACTTACATTGAAAGATATAA
>chr7D_3
--CAGCCTGTACCCACCTTGGTCTATCCCAGCTCCTCCCCTG-TTCTATCCTATTTGCAC--------------------
-------------CCAAACGCTGTTTGTTTCTAAGCAATCCTAACAGAGA--AGTAGCTAGACATGAGAAAGTCGCATAC
ATTTCAGTTAAAGAAACACCTTGAAATTGCACAGCTCACAGACTGTTACTACTGCCAATTAAGTCTGGAGTGTCATAAAG
GTAAAATTAAGGGGCGTTCAGATCACCTTGGCCTTGGTCTCCTCGTCGACGATGTCGGCTTTGAACTTGAGGAATCCCAC
GCGCTGCCCGAACATGTCCACCCCCTGCACGCATCA----------AATTCAGATGTGCCATCCATCCACTAATCCCCCG
ACGAAATCGTTATTAGAGCTCAAACATTTCGATGCGGGAG-----AAAGAGGGGA------------GCACCTGGATGAG
GATCTGGCGGAGGCTGAGCTTCCCGCGGGCGAGCAGGCCCCTCTCCGCCTGCAGGCTCTCCAGCCACCGCCTGAACAGCG
CCGACTCCAGCGCCTTCCTGAAGTCCGCCTCCGGGAGGCCCGCCGCCGCCACCACGCGCACGGCCCCCGCCCCACCGGGC
ACCTCCACGGTGGCG---CCGAGCTGAGGCGCCGCCCCCGCGTCCGACGAAGCCATGCGCACAGCCACCGCGCCGCTCCG
GAAGGGGACGGG----------GAGGAGAGGCAACGGCGGCGGCGAGCGGCGACGGAGGCTAAGCAGACAGTG------T
GCTGCCGCACGTGTTGCCGCGGCCATTTCTGCTGCCACAAT---CCTCGCCGGGCACGCGAGCCATGTGCCACTTCTCAT
GGGCCGGGCCGGGCCGGATA----AAGCCCATC----GTGCCAACATCGG-TCCAGCGGCCCACTTGGGCGGCTGTAACC
TCGCTTCCTC---TGCTCTAAT-CCGCGTAGCAGTATCGGCGGCGGCGGAAGCAAACCAACCAGGAA-GAGAGCGGCGGC
GGCGGG------------GGAGGAGATGACGGGGAAGGGGGTGCGGCGGAGGGAGAAGAACTACCGGGCGGCGCACGGGG
GCGACGGGCGGCTGCCCCCGCCGCCCAAGCAGCGGGAGCTCGAGGCGCTCCCGTCCAAGCTCCGCCGCCTCATCGCCATC
CAGAAGAAGCAGGACGCCACCG---CCGGCGGAGGCAAGGCCGACGCTTCCTCCGGTGAGCTTTCCTTACCCCTTTATC-
CGCCTCTCCTACGGCGGCGGCAGCGCTGGCCCGCTAACCGTCTCGCTCGTTGCCCAGCAGGAGGAGGGGCTCCAGGGAAG
CATGGCGCAGATGCGACGGGGAAGGACAAGGCGGGGAAGGATAAGGTAGTGTGTCCTAGACACAGGATGCAACTTGCGAA
ATTG----------------------------------TGCTTAACACAATTCGTCTTGCAAAATTAGCTT-CTGTGGTC
TGTGGCATTGTTCTTTAGTAGCTGGTGAATGATTGTGCAGAAAACTAAGAAGCAGAACTTGGAGGCTGCCGCGGATGCCA
AGGTAACAGAGGGTGCACCAGGGCCGGACGAGAGTGCGAGTGCCGATGGTGGTAAGAAAAAGAGGAAGAGGGGAAAGGTC
GAGGATCTCCGTTTCAAGGAGCTCGAGGCGAATGTCTCGGTTTCGAAGAAGCAGAAAAGGAAGAAGTGAGTTGTCTAACC
ATTTGGCCACTCCTGGTTTGCTTTGCTCGGATCGTGTAGCTTTTTGCATCTACCAATTTTGTTTCTATGTTGCCTGGTGC
AAATAAAATGCCATA----TAGTATCTTGCTTCAAGTGATGCTAGGTTAATCGCATACATTTTTTAACTAGGACAAATGC
TGTAGTGTAGTAGGCACCTGCTTAGGAGAACCTCCACATTCACTCGTGGCAACGTATAATAAATGGATAATAATGTATCT
TGTGTCGTTGTTTGCAGACATCTGGATGAGAAGAAAAAGAAGCGCAAGGCTGGTAAGGCCGAGACTCATCTGGAATTCCC
TGGACGTGAGAAGGTCAAATTTGGTGATATTGTCGAGGCCCCACCAAAGCTATCATTCCCAAAGGTGCCCTCTCTTCTCC
TGTCCTTCTATGTGAACTCATTCACTTTGTTATTTCGTGGATTAAATGTGTTATTCTTGCTTTTTTAGCGGAAGAGTCAT
TTGGATGTTTCTGCTGAGAGGCTAAGGAAAGAGGTGGTTGAGAATTACAGAAACATCAAAGGCTGGGCATCAAGGCCTGG
TCTCCAGCTTCCCACTCTAGCTGAATAAACATCTGTCTAACCATTTATCTTGGACCTTCTTATGTTAGATCAGAGTTGCT
TATATACAACAAATTATGCAATCTCTTGTAAGCAATTGTGAAATGTTATATTGTTGTTTGATTCGAGGTTGTTTGTTCTG
TTTTGCTTCCCTAAAGCAATTATTATATCATTCT-GGGTAATTGGGAATTCTGGGATTAAGAAAATGTATTATTTGCTTT
TGGAATGGCAATAGGAGCATAAACTCATGCTACTCATGTCC---------------------ACATTATTATTACAACTT
GTCAAAATAGTAGCTGTTGGAGATTTACATATGACAGTGCGATCAGAAAAGATCTAGTAGCCTGTTCAGGTGTTCAAGCT
GAAATATTACGGGGGTACACAAAAAGATGAAGTCCTTGATCCATATGGAGAGTAAACATTGTTTTGTATACTGGACTCTT
GGATTCATCTTCCAGTTTGAACCTGAAGAAATGTATGAGGGTAGCAGCCATGATTTTCATCTGCCTGTATGCAAATTCTT
TCCCCAAGCATATACGTGGACCCGCCTGATCATGGGAAGTAGACTTATTAAATGGTGAAAATTGCCATCTGAACTCTAAA
GAAAAAATAGAACTATCTTTGCTTGTGTTTTT-ACTTGAGAACTAACTTTAACACAGGCAGACTTTTTTTATTAGTTTGT
GTGTATGCGCTTGATGTCAGTTGTGGTACTTTCTGAATGCACATCCATTAGCAATTAGTG-CCATGTTGTTTCCTACTCC
CTCCGTCCGAAAAAACTTCTCCCTCAAATGGATGTATCTAGCACCAAGTTAGTGCTAGATACATCCATTTGAGGAACAAG
CTTGGGACAAGCTTTTCCGGACGGAGGGAGTACTTTATTTGT-AATATAATGCTTGATTTTCTGTCTTAACAACAGAAGA
-TCATATTTAAATAACAGCAATGTGACTTTTTAATATGCTTTTCACCAAATACCAACTTATAGTGATATTCTCGCCTGTG
CCTGACATAACCCAATATGTCAGAGTTGGACATGCTCGCTGAATAAAATTATAGGCCCTATAAACATGTGCAGAGATTAT
TTCTCAAGTAATACTTACATTGAAAGATATAA
>chr2D_3
--CAGCCTGTACCCACCTTGGTCTATCCCAGCTCCTCCCCTG-TTCTATCCTATTTGCAC--------------------
-------------CCAAACGCTGTTTGTTTCTAAGCAATCCTAACAGAGA--AGTAGCTAGACATGAGAAAGTCGCATAC
ATTTCAGTTAAAGAAACACCTTGAAATTGCACAGCTCACAGACTGTTACTACTGCCAATTAAGTCTGGAGTGTCATAAAG
GTAAAATTAAGGGGCGTTCAGATCACCTTGGCCTTGGTCTCCTCGTCGACGATGTCGGCTTTGAACTTGAGGAATCCCAC
GCGCTGCCCGAACATGTCCACCCCCTGCACGCATCA----------AATTCAGAAGTGCCATCCATCCACTAATCCCCCG
ACGAAATCGTTATTAGAGCTCAAACATTTCGATGCGGGAG-----AAAGAGGGGA------------GCACCTGGATGAG
GATCTGGCAGAGGCTGAGCTTCCCGCGGGCGAGCAGGCCCCTCTCCGCCTGCAGGCTCTCCAGCCACCGCCTGAACAGCG
CCGACTCCAGCGCCTTCCTGAAGTCCGCCTCGGGGAGGCCCGCCGCCGCCACGACCCGCACGGGCCCCGCCGCGCCGGGC
ACCTCCACGGTGGAG---CCGAGCTGAGGCGCCGCCCCCGCGTCCGACGAAGCCATGCGCACAGCCACCGCGCCGCTCCG
GAAGGGGACGGG----------GAGGAGAGGCAACGGCGGCAGCGAGCGGCGACGGAGG---------------------
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>chr5B_16
---------------CCCTGGTCTATCGCGGCTCCTCACCCGGTTCTATCATATCTGCACCTACCTTATGGTCTCCACTT
ACTCATACT----CCAAACCCTGTTTGTGTCTAAGCAATCTTAACATAGATAACAAACTAGACATGACAAGGTCACATCT
ATTTTAGTTGGAGAAACACCTTAAAATTGTATGAATCGCAAATTGTTACTACTGCCAGTAAAAGG-------------AG
ATAGAATCCTGGGACATTGTGATCACCTTGGCTTTGGTTTCCTCGTCGACGATGTCGGCTTTGAACTTGAGGAACCCCAC
GCGCTGCCCAAACATGTCCACCCCCTGCA-ACACATCGCGGAGTATATTTCAGATGCGCCGTCGACAGACAGATTCCCCG
AGGAAATCGTACT---AGCTCAAACATTTCGATTCAGAGG-----GAG-GGGGAAGCACTAGG-ACCGCACCTGGATGAG
GATCTGCCGGAGGCTGAGCTTCCCGTGGGCGAGCAGGCCCTTCTCCGCCTGCAGGTTCTCCAGCCACCGCCGGAACAGCG
CCGAGTCCAGCGCCTTCCTGAAGTCCGTCTCGG-----------------------------------------------
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>chr4B_16
---------------CCCTGGTCTATCGCGGCTCCTCACCCGGTTCTATCATATCTGCACCTACCTTATGGTCTCCACTT
ACTCATACT----CCAAACCCTGTTTGTGTCTAAGCAATCTTAACATAGATAACAAACTAGACATGACAAGGTCACATCT
ATTTTAGTTGGAGAAACACCTTAAAATTGTATGAATCGCAAATTGTTACTACTGCCAGTAAAAGG-------------AG
ATAGAATCCTGGGACATTGTGATCACCTTGGCTTTGGTTTCCTCGTCGACGATGTCGGCTTTGAACTTGAGGAACCCCAC
GCGCTGCC-AAACATGTCCACCCCCTGCA-ACACATTGCAGAGTATATTTCAAATGCGCCGTCGACAGACAGATTCCCCA
AGGAAATCGTACC---AGCTCAAACATTTCGATTCAGAGG-----GAGGGGGGAAGCACTAGG-ACCGCACCTGGATGAG
GATCTGCCGGAGGCTGAGCTTCCCGTGGGCGAGCAGGCCCTTCTCCGCCTGCAGGTTCTCCAGCCATCGCCGGAACAACG
CCGAGTCCAGCGCCTTCCTGAAGTCCGTCTCGG-----------------------------------------------
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>chr1B_16
---------------CCCTGGTCTACCGCGGCTCCTCACCCGGTTCTATCATATCTGCACCTACCTTATGGTCTCCACTT
ACTCATACT----CCAAACCCTGTTTGTGTCTAAGCAATCTTAACATAGATAACAAACTAGACATGACAAGGTCACATCT
ATTTTAGTTGGAGAAACACCTTAAAATTGTATGAATCGCAAATTGTTACTACTGCCAGTAAAAGG-------------AG
ATAGAATCCTGGGACATTGTGATCACCTTGGCTTTGGTTTCCTCGTCGACGATGTCGGCTTTGAACTTGAGGAACCCCAC
GCGCTGACCAAACATGTCCACCCCCTGCA-ACACATCGCGGAGTATATTTCAGATGCGCCGTCGACAGACAGATTCCCCG
AGGAAATCGTACC---AGCTCAAACATTTCGATTCAGAGG-----GAG-GGGGAAGCACTAGG-ACCGCACCTAGATGAG
GATCTGCCGGAGGCTGAGCTTCCCGTGGGCGAGCAGGCCCTTCTCCATCTGCAGGTTCTCCAGCCACCGCTGGAACAGCG
CCGAGTCCAGCGCCTTCCTGAAGTCCGTCTCGG-----------------------------------------------
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>chr4A_19
------------------TGGTCTATCGCTGCTCCTCACCCGGTTCTATCATATCTGCACCTACCTTATGGTCTCCACTT
ACTCATACT----CCAAACCATGTTTGTGTCTAAGCAATGTTAACATAGATAACAAACTAGACATGACAAGGTCACATCT
ATTTTAGTTGGAGAAACACCTTAAAATTGTATGAATCGTAAATTGTTACTACTGCCAGTAAAAGG-------------AG
ATAGAATCCTGGGACATTGTGATCACCTTGGCTTTGGTTTCCTCATTGATGATGTCGGCTTTGAACTTGAGGAACCCCAC
GCGCTGCCCAAACATGTCCATCCCCTACA-ACACATCGCGGAGTATATTTCAGATGCGCCATCGACAGACAGATTCCCCG
AGGAAATCATACC---AGGTCAAACATTTCGATTCAGAGG-----GAG-GGGGAAGCAGTAGG-ACCGCACCTGGATGAG
GATCTGCCGGAGGCTGAGCTTCCCGTGGGCGAGCAGGCCCTTCTCCGCCTACAGGTTCTCCAGCCACCGCTGGAACAACG
CCGAGTCCAGCGCCTTCCTGAAGTCCGTCTCGGGGAGGCCCGCCGCCGCCACGACCCGCACGGGCCCCGCCGCAACGGGC
ACCTCCACAGT---------------------------------------------------------------------
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>chr5A_19
------------------TGGTCTATCGCTGCTCCTCACCCGGTTCTATCATATCTGCACCTACCTTATGGTCTCCACTT
----ATACT----CCAAACCATGTTTGTGTCTAAGCAATGTTAACATAGATAACAAACTAGACATGACAAGGTCACATCT
ATTTTAGTTGGAGAAACACCTTAAAATTGTATGGATCGTAAATTGTTACTACTACCAGTAAAAGG-------------AG
ATAGAATCCTGGGACATTGTGATCACCTTGGCTTTGGTTTCCTCGTCGATGATGTTGGCTTTGAACTTGAGGAACCCCAC
GCGCTGCCCAAACATGTCCATCCCCTACA-ACACATCGCGGAGTATATTTCAGATGCGCCATCGACAGACAAATTCCCCG
AGGAAATCGTACC---AGCTCAAACATTTCGATTCAGAGG-----GAG-GGGGAAGCAGTAGG-ACCGCACCTGGATGAG
GATCTGCCGGAGGCTGAGCTTCCCATGGGCGAGCAGGCCCTTCTCCGCCTACAGGTTCTCCAGCCACCGCCGGAACAGCG
CTGAGTCCAGCGCCTTCCTGAAGTCCTTCTCGCGGAGGCCCACCGCCGCCATGACCCGCACGGGCCCCGCCGCACCGGGC
ACCTCCACAGT---------------------------------------------------------------------
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>chr1B_19
------------------TGGTCTATCGCGGCTCCTCACCCGGTTCTATCATATCTGCACCTACCTTATGGTCTCCACTT
ACTCATACT----CCAAACCCTGTTTGTGTCTAAGCAATCTTAACATAGATAACAAACTAGACATGACAAGGTCACATCT
ATTTTAGTTGGAGAAACACCTTAAAATTGTATGAATTGCAAATTGTTACTACTGCCAGTAAAAGG-------------AG
ATAGAATCCTGGGACATTGTGATCACCTTGGCTTTGGTTTCCTCGTCGACGATGTCGGCTTTGAACTTGAGGAACCCCAC
GCGCTGCCCAAACATGTCCACCCCCTGCA-ACACATCGCGGAGTATATTTCAAATGCGCCGTCGACAGACAGATTCCCCG
AGGAAATCGTACC---AGCTCAAACATTTCGATTTAGAGG-----GAGGGGGGAAGCACTAGG-ACCGCACCTAGATGAG
GATCTGCCGGAGGCTGAGCTTCCCATGGGCGAGCAGGCCCTTCTCCGCCTGCAGGTTCTCTAGCCACCGTCGGAACAGCG
CCGAGTCCAGCGCCTTCCTGAAGTCCGTCTCGG-----------------------------------------------
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>chr7A_244
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--------------CATCTTGATCACCTTGGATTGGGTCTCCTCGTCGACGATGTCGGCTTTGAACTTGAGGAACCCCAC
ACGCTGCCCGAACATGTCCACCCCCTGCCCACACCGCGCGCCGTGAATTTCAGGTGCGCCGTCGGTCGATTGATTCGGGA
ACGACATCGTAAC---AGCTCAAACATTTCGATGTGAGAGTGTGAGAG-GGGGAGGAGCAG--------ACCTGGATGAG
GATCTGGCGGAGGCTGAGCTTCCCGTGGGCGAGCAGGCCCCTCTCCGCCTGCAGGTTCTCCAGCCACCGCCTGAACAGCG
CCGAGTCCAGCGCCTTCCTGAAGTCCACCTCGGGGAGGCCCGCCGCCGCCACGACCCGCACGGGCCCCGCCGCGCCGGGC
ACCTCCACGGTGGCG---CCGAGCTGAG------------CGTCCGAAGAAGCCATGCGCACAGCCAGCGCGCCGCTCCG
G-CGGGGAAGGGGGAGGGAAGAGAGGAGAGGCA---GCGGCGGCGCGCGGCGACGGACCAATCCGAACAGACACTGCGCT
GCTGCTGCACGTGCCGCCGCCGCCATTTTCTCTCTCTCGGGAAGCTTCGCGT--CACGCGAGCCATGTGCCCCTTCACAT
GGGCCGGGCCGGGCA-----GAAGAAGCCCATTCACTGTGCCAATTTTGG-CCCATCGGCCCGCTT-GGCGCCTGTAACC
TCGCCTCCTC---TGCTCTA------------------------------------------------------------
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>chr7A_856
A-------------------------------------------------------------------------------
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-------------------------------------GTGGCAATTTAGGCCCTAACGGCCTACTTGGGCGGCTGTAACC
TCGCCTCCTCCTCTGCTCTAAC-CCGGAGAGA----------GCGGCGGCGGAAAACAAACCAAGCA-TCGAGCGGCGGC
GGCGG------------AGGAGGAGATGACGGGGAAGGGGGTGCGGCGGAGGGAGAAGAACTACCGGGCGGCGCACGGGG
GCGACGCGCGGCTGCCCCCTCCGCCCAAGCAGCGGGAGCTCGAGGCGCTCCCGTCCAAGCTCCGCCGCCTCATCGCCATC
CAGAAGAAGCAGGACGGCGCCG---CCGGCGGGGGCAAGGCCGACGCTTCCTCAGGTGAGCTTTCCTTACCCTCCCGTAT
CGCCTCTCCTACGGCAGCTGCAGCGCTGGCCCGCTAATCCTCTCGCTCGTTGCCCAGGACCAGGAGGGGCTCCCGGGAAG
CATGGCGCCGATGCGACGGGGAAGGACAAAGCCGGGAAGGATAAGGTAA-------------------------------
--TGCCCTCTCCTAGAGACCGGATGCGACCTGAAAAACTGCTTAACACAATTCGTCTCGTTCCACAAGAGCACTGTGGTC
TGCGCCATTGTAATTTAGTAGCTGGCGAATGATTGTGCAGAAAACCAAGAAGCTGACCCTGGAGGCTGCCGCGGATGCCA
AGGCAGCAGAGGGTGGACCGGTGGCCGATGAGAACGCGAACGCTGATGGTGGAAAGAAGAAGAGGAAGCGGGGGAAGGTC
GAGGATCTCCGTTTCAAGGAGCTCGAGGCCAATGTCTCGGTTTCAAAGAAGCAGAAAAGGAAGAAGTGAGTGATCTAACC
ATTTGATCTGTCCTGGTTTGCTTGGCTCGGACAGTGTAGCTTTT-GCATCAATCCATTTTGTTTCTATGTTGCCTGGTGC
AAATAAAATGCCATATACATAGTATCTTGCTTCAAGTGATGCTAAGTTAATCGCATACATTTTTGAACTAGTACAAATGC
TCTGCTGTAGTAGGCACCTGCTTAAGAAAACCTCCACATTCGCTTGTAGCAACGTATAATAAATGGATGATAACATATCT
TGTATCATTGGTTTCAGACATCTGGATGAGAAGAAAAAGAAGCGTAAGGCTGGTAAGTCCGAGACTCATCTGGAATTCCC
TGGACGTGAGAAGGTCAAATTTGGTGATATTGTTGAGGCTCCACCAAAGTTATCATTCCCAAAGGTGCCCTCTCTTCTCA
TGTCCTTCTATGTGAACTCATTTACTTTGTTATTTCGTGGGTTAAGTGTGCTGTTCTTGTGTTTGTAGCGGAAGAGTCAT
TTGGATGTTTCTGCTGAGAGGCTAAGGAAAGAGGTGGTTGAGAATTACAGAAACATCAAAGGCTGGGCATCAAGGCCTGG
TCTCCAGCTTCCCTCTCTAGCTGAATAAACATCTGTGTAACCATTTATCTTGGACCTTCTTATGTTAGATCAGAGTTGCT
TATATATAACAAGTTGTGCAATCTCTTGTAAGCAATTGTGAAATGTTATATTGTTGTTTGATTCGAGGTTGCTTGTTCTG
TTTTGCTTCCCCAGAGCAATTATTATATCATTCTGGGGTAATTGGGAATTCTGGGACTAAGAAAATATATTATTTGCTTT
TGGTTCAGCAATAGGACCATTAACCCATGCTACTTAATTTGTTCTTCTTATGCGAGAACTGGACATTATTATTACAACTT
GTCAAAAGAGTAGCTGTTGGAGATTTACATATGACAGTGTGATCAGAAAAGATCTAGTAGCCTGTTCAGGTGTTCAAGCT
GAAATATTACGGGGGTACACAAAAAGATGAAGGCCTTCATCCATATGGAGAGTAAACATTGTTTTGTATACTGGACTCTT
GGATTCATCTTCCAGTTTGAACCTGAAGAAGTGTATCAGGGTAGCAGCCATGATTTTCATCTGCCTGTATGCAAATTCTT
TCCCCAAGCATATACGTGGGCCCGCCTGATCATGGGAAGAAGACTTATTAAATGATGAAAATTGCCATCTGAACTCTAAA
GGAAAAATAGAACTATCTTTGCTTGTGTTTTTGACATGAGAATTGATGTTAACACATGCAGAC-TTTTTTATTAGTTTGT
TTGTAAGCGCTTGATGTCAGTTGCAGTACTTTCTGAAAGCACATCTATTAGCAATTAGTTACCATATTGTTTCC------
--------------------------------------------------------------------------------
------------------------------TACTTTATTTGT-AATAAAATGCTTGTTTTTCTATCTTAACAACAGAAGA
-TCATATTTAAATAACAGCAGTGTGACTTTTTAATATGCTTTTCACCAAATACCAACTTATAGTGATATTCTCGCCTGTG
CCTGACATAACCCAATTTGTCAGAGTTGGACATGCTCGCTGAATAAAATTATAGGCCCTATAAACATGTGCAGAGATTAT
TTCTCAAGTAATACTTACATTGAAAGATATAA
>SNPs
SS------S---------------------------------SS--------------------------S----S----
--S---SS-SSSS---------------------------------------------------S-------------S-
---------S-S-----------------------S-S---------------------S-----S----S--------S
---------------------------------------S----------------------------------------
-----S------------------------------S-------------------------------------------
-----------------------------------------------------------S--SS----------------
----------------------------------------------S---------------S---S-------------
--------------------------------------------------------------------------------
---------------SSS--------S-----------------S-----S-----------S---SS-SS--S------
-S----------------------------------------------------------S-------------------
-----------------------------------S---------------------------------------S----
-------S---------SSS--S--------SS-------------S------------------S---S----------
---------------S------S------S------S--------------S--------S---S-SS------------
-----SSSSSSSSSSSS---------------------------------------------------------------
----------------------------------------------------S---------------------------
---------------------SSSS--------------------------------------S-----------SSS--
-S-------------S----------------------------------------------------------S-----
--S---S------------SS-----------------------------------------------------------
----------------------------------------------------------------------------S-S-
-----------S-------S---------------------------------S-S-S----------------------
---------------------S------------------------S---------------------------------
--------------------------------------------S----------------------------S---S--
-------S-----------S-S------------------S--S---------SSS------------------------
--------------S----S--------------------------------------S----S--------S-------
------------------------------------------------------------S------------S----S-
--------------------------------------------------------------------------------
---S-----S---------------------------------------------------------------S------
-----S-------------------------------------------S---------SS-------------------
------------------------------------------------------------------S----------S--
-------------------------------S-S------------------SS----------S---------------
------------S---S---S----------------------S----------------------------S-------
--------------------------------S---------S----------------S-----S--------------
--------S--------------------------SS--SS-SS-S------------------S---------------
------------------------S-------------S--S-------------------S-----S------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-------------------------------------------------------S------------------------
-------S-S----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S--------------------------S---------S
S-------------S--------------------S-SS----------S------------------------------
----S--------------------------------S-------------------S----------------------
--------------------------------
>forward_1025
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GCGGAAACAAACCAAGCAGT---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>reverse_2601
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------TTCTTCGCGAGAACTGGACG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
