>input_sequence_57346
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-------ATGGAGTCGGCCGACGCAGCGGGAGGGGCGCCCGGGGGCGGGGCGCCGCCGGGCCGCGGCTCCTCGGCCAAGC
GCATGCGCGGCGTGATTGGCAGCGG---------CGGCGGCGACGGCATGGAGTTGGTGCCGTGGGGGTCGCCCCCGCAG
CCGGGCCAGCAGCCGCCGCAGCTCCAGGGGTCGGCGTCGCGGATCTGCCGCGTGAGGGCGTCGGGGGGCAAGGACCGGCA
CAGCAAGGTGTACACGTCCAAGGGCATCCGCGACCGCCGTGTGCGGCTCTCGGTGCCCACGGCCATCCAGTTCTACGACC
TGCAGGACCGCCTCGGCTTCGACCAGCCCAGCAAGGCCGTCGAGTGGCTCATCAACGCCGCCTCCGCCGCCATCGACGAG
CTCCCCTCCCTCGACCCGGCCGCCTTCGCCAACATGCCGGCCGACCACCAGGCCGCGCCCCGCGCCGGCAAGCAGC---A
GCAGCCGCAGGGCAGCAGGTCCCTGTGCAGCAGCACCTCGGAGACCAGCAAGGGGTCCGAGCTCTCGCTCTCGCGCTCCG
ACGGCCGCGTCGGCGGCGGCTCCTCCCTGGACAAGGAGGTCACCGTCGCCAGCAACCCCTCCGCGCAAGCCGGGTCCTTC
ACCGAGCTGCTCACCGGGGCGGGGGCGGCGT---------------CGGCCATTGCCACCGCGGCTCCGCGCAGGCAGTC
CTGGCAGCAACAGCAGCAGCAGCCCGTTTCCGCGGTCACCGCGGACCGCGTCGGCATCGCGCACCCCGGTAAAGGCAGCG
GCGCGCAGGTGGTGCCGACGTACCCCGGCTTCAGATTCGGCAATGCGCCCCCGTTCGGCATGCAGCCGGCGCAGCCGTTC
AACTTCGGCCCCTCCGCCCAGAACCAGATGACGCAGTTCTCGCTCGTCCAGGGCGGGCTGGCGGCGGCTCCGGCTCCGGC
TCAAGCCGGAGACTACAGCCTCGACTTCTCGATGAACTCCGGTTACATGGGTGCCACCAGGGGGGCCCTTCAGTCCAATT
CGCCGCACTTCTCCAGCCAC---CAGCAGCAGCAGCAGCAGCAGCGGCAGCTCCAGGACCTGGACGACGGTCCGAGCCCT
CCCTTCCTGTACGCGAACGCCGCCGCCACCGCCCCGCACCTCGCGTCGGAGAACCACCTCACGGCGACCGCGGCGATGCA
GCTGTGGAACGGGTTGCAGCACGCCGGCATGAAGGAGAAGAGCAAGAACTGA----------------------------
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>chr5B_1_TraesCS5B01G426200
CATACGCGCGTAGAGCGCTGCGTCTCCACCACGGTCCTCTCATCAATTCACCAAAGCAGGAATAGAGTTTTACGCCTCGC
GGCAGCCCGAACCTGGGCAATCTGCCTTGTCGTGCTGCCTCTGCACTCTTCGCTCTTTGTGCAATGTGCTCTTCCCCTTG
CCGAACCATAAGAGGCCGATGGCCCTATAGGTGGCCGTGGTTTCCCACGACAATGATCAATCTCATCTCCTTATGGTAGA
TCACTCATTGTGAATACGTAAACAACAAGACCACCATTAGCCATGGCCGCCAAGAAAAAAAGCGCCAACACGAACTGATA
CAAGCGCGCCGCCGTTTAATTCTGCCGTTGCAATACACGGGCACATGTGTTAGTAAAATAAAATAGTGAAAAGTCGGACC
GAGCGTGTACATGCATACCTTCGGGTCGCCGTCGTGGTGCGTCGGCCGTAAAGCGACCCCGCCGCCGCCGCCAAGGCGAA
GGCGAACA-----CCGTTCCTATTCCCACGCGCCAGCCTCGACAAGTGTGTGGAGCAGAGCCAGTGAGTAGCGAGCAGCG
CTGCTGCGCTGCTGCCGCCGCCGCAGCTAGGCAGATCTGACAGCCCGACGCCACGGCCAGGGTCCCCCTCCAAAGCCTGC
CGCCGCCACTGTTCCCCCGCTGCCGAAGAGCCAGCTGCCGCGTGCGGAGAGAGAAGCCAGC-------------GCGTGC
GAGCGAGCGAGCTCAGCTGCTGCATCG----GGGGCGAGAAAAAAAGGGCGGCGCCAACGA----TCAGGCAGGGGTGC-
--------------AGCTGCGGTAGCTCGTAGGGGTAGCATCGTAAAAGACAGACGCGCCGGCTGGGCGTGGCAAATCTG
CTTGCCGGAAAAGGCCGAGCCGCGAGCCGTTGTTGGCGTTGCCACTCTAGCCAG------CTCCAGCCCTGACACGCGCA
CAGCGCAGCCGAAACGGCTGCTCCCCGTCCCGAGCGCAATAAAAGGGGGCCTCGCTGGCTGTCGCCGCAGCGTATGTACG
GGGTTGGATGGAGTCGGCCGACGCAGCGGGAGGGGCGCCCGGGGGCGGGGCGCCGCCGGGCCGCGGCTCCTCGGCCAAGC
GCATGCGCGGCGTGATTGGCAGCGG---------CGGCGGCGACGGCATGGAGTTGGTGCCGTGGGGGTCGCCCCCGCAG
CCGGGCCAGCAGCCGCCGCAGCTCCAGGGGTCGGCGTCGCGGATCTGCCGCGTGAGGGCGTCGGGGGGCAAGGACCGGCA
CAGCAAGGTGTACACGTCCAAGGGCATCCGCGACCGCCGTGTGCGGCTCTCGGTGCCCACGGCCATCCAGTTCTACGACC
TGCAGGACCGCCTCGGCTTCGACCAGCCCAGCAAGGCCGTCGAGTGGCTCATCAACGCCGCCTCCGCCGCCATCGACGAG
CTCCCCTCCCTCGACCCGGCCGCCTTCGCCAACATGCCGGCCGACCACCAGGCCGCGCCCCGCGCCGGCAAGCAGC---A
GCAGCCGCAGGGCAGCAGGTCCCTGTGCAGCAGCACCTCGGAGACCAGCAAGGGGTCCGAGCTCTCGCTCTCGCGCTCCG
ACGGCCGCGTCGGCGGCGGCTCCTCCCTGGACAAGGAGGTCACCGTCGCCAGCAACCCCTCCGCGCAAGCCGGGTCCTTC
ACCGAGCTGCTCACCGGGGCGGGGGCGGCGT---------------CGGCCATTGCCACCGCGGCTCCGCGCAGGCAGTC
CTGGCAGCAACAGCAGCAGCAGCCCGTTTCCGCGGTCACCGCGGACCGCGTCGGCATCGCGCACCCCGGTAAAGGCAGCG
GCGCGCAGGTGGTGCCGACGTACCCCGGCTTCAGATTCGGCAATGCGCCCCCGTTCGGCATGCAGCCGGCGCAGCCGTTC
AACTTCGGCCCCTCCGCCCAGAACCAGATGACGCAGTTCTCGCTCGTCCAGGGCGGGCTGGCGGCGGCTCCGGCTCCGGC
TCAAGCCGGAGACTACAGCCTCGACTTCTCGATGAACTCCGGTTACATGGGTGCCACCAGGGGGGCCCTTCAGTCCAATT
CGCCGCACTTCTCCAGCCAC---CAGCAGCAGCAGCAGCAGCAGCGGCAGCTCCAGGACCTGGACGACGGTCCGAGCCCT
CCCTTCCTGTACGCGAACGCCGCCGCCACCGCCCCGCACCTCGCGTCGGAGAACCACCTCACGGCGACCGCGGCGATGCA
GCTGTGGAACGGGTTGCAGCACGCCGGCATGAAGGAGAAGAGCAAGAACTGATCACCCCGATTCTCCAGCGGTAAGACTG
TC------TCGCCCCCTTATTACCATTGATTGATTGGTTC----AAGATTAGATTCGTTATATTGGCATGGCTGCAAACT
TTTTGGCGCTGCTCGAGGTGTCCTCGTGTCCTTCAAAAGTCCCACAGAGCACAAATCATGCTTGGTTACGAAGGACGGGT
GTCGAAATCTTAGCGGCAGGTGTCTGCATTTAGCTGAATTTGCATGGTTTGAGCCAAACAGGTGTCGATTGCTTCCCTTT
GGGAGGGGAT----------AGGAGACCGGCCAATCACATGGGCTGTGAATTGTGATTGCCCGGCATTTTGCATTGTCCC
TGG---TATAATACAGTAA-TAGTATGATCATCACAGTAATTCATTCTCAAGGCCACAGTTGCTAGTTTTGGGCACAACC
TTTATAACAACATTTGTCAGCTTCATCTTAATGTAGTTACTGTTCATATTTATCTTTGCT-----ACGCCACTGATATTT
GTC--GTCATACAACTATCACAACGGGCATCCTGATGTGCTTTAGCAAAACTGTTATTGAATACAACAGTCGACAGGTCC
GACATATGCCATG-TTTTTTCCATGCACTGGGCTGCAGTAACCTAGACAAATACCCGCTCAGTCTTATTGGTTTGACGTA
GCTTGCTTCAGATGTCGGCAAAGTGGTTCCTGGTTGGTTGGTTGGGGATCTA---AGTGACTAAGTCTACATGTGCAAAA
AAGAAAAACATTTT---AGATTAAAAAAAT----------------------------CATACTATCCAT-AAAACATAG
---TTTCAGATGTGC-TTCACCACCACATAAGTCTGCTATTTTTCATTTTCTACCTTAGTTAGACACCCTGAATCATCTT
CCTGCTTTCAATTTTCTATCCAATCAACACTAGGATGTGCATTCCATCAGTAG-----ATACAAAAGCAGTAGACAGGTG
AATGTTTCTGTTCATTGTGC----------GCTTTCCGCATGCAAATTATACTGTCATTGTGCACTGCATTGACAGAGGT
GTCAAGTAGTAGTATCAG-
>chr5D_431
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------------------------------GTCGTGGTGCGTCGGCCGTAAAGCGACCGTGCCGCCGCCGCAAAGGCGAA
GGCGAACA-----CCGTTCCTATTCCTACGCGCCAGCATCGACAAGTGTGTGGAGCAGAGCCAGTCAGCAGCGAGCAGCG
CTGCTGCGCCGCTGCCGCCGCCGCAGCTAGGCAGATCTGACAGCCCGACGCCACGGCCGGGGTCCCCCTGCAAAGCCTGC
CGCCGCCACTGTTTCCCGC--------------GCTGCCGCGTGCGGAGAGAGAAGAGAAGGCAGCGCGTGCGAGCGAGC
GAGCGAGCGAGCTCAGCTGCTGCATCGGGGCGGGGCGAGAAAAAAAGGGCGGCGCCAACGAACGATCAGGCAGGGGTGCA
GTGCAGTGCAGCTGAGCTGCGGTAGCTCGTAGGGGCAGTATCGTAAAAGACAGACGCGCCGGCTGGGCGGGGCAAATCTG
CTTGCCGGAAAAGGCCGAGCCGCGAGCCGTTGTTGGCGTTGCCACTCTAGCCAGCTCCAGCTCCAGCCCTGACACGCGCA
CAGCGCAGCCGAAACGGCTGCTCCCCGTCCCGAGCGCAATAAAAGGGGGCCTCGCTGGCTCTCGCCGCAGCGTATGTACG
GGGCTGGATGGAGTCGGCCGACGCAGCGGGTGGGGCGGCCGGGGACGGGGCGCCGCCGGGCCGCGGCTCCTCGGCCAAGC
GCATGCGCGGCGTGATTGGCAGCGG---------CGGCGGCGACGGCATGGAGGTGGTGCCGTGGGGGTCGCCGCCGCCG
CCGGGCCAGCAGCCGGCGCAGCTCCAGGGGTCGGCGTCGCGGATCTGCCGCGTGAGGGCGTCCGGGGGCAAGGACCGGCA
CAGCAAGGTGTACACGTCCAAGGGCATCCGCGACCGCCGGGTGCGGCTCTCCGTGCCCACGGCCATCCAGTTCTACGACC
TGCAGGACCGCCTCGGCTTCGACCAGCCCAGCAAGGCCGTCGAGTGGCTCATCAACGCCGCCTCCGCCGCCATCGACGAG
CTCCCCTCCCTCGACCCGGCCGCCTTCGCCAACATGCCGGCCGACCACCAGGCCGCGCCCCGCGCCGGCAAGCAGCAGCA
GCAACCGCAGGGCAGCAGGTCCCTGTGCAGCAGCACGTCGGAGACCAGCAAGGGGTCCGAGCTCTCGCTCTCGCGCTCCG
ACGGCCGCGTCGGCGGCGGCTCCTCCCGGGACAAGGAGGTCACCGTCGCCAGCAACCCCTCCGCGCAGGCCGGGTCCTTC
ACCGAGCTGCTCACCGGGGCGGGGGCGGGGGCGGCGTCGGCCGGCGCGGCCATTGCCTCCGCGGCTCCGCGCAGGCAGTC
CTGGCA---------GCAACAGCCCGTTTCCGCGGTCACCGCGGACCGCGTCGGCATCGCGCACCCCGGTAAAGGCGCCG
GCGCGCAGGTGGTGCCGACGTACCCCGGCTTCAGATTCGGCAATGCGCCCCCGTTCGGCATGCAGCCGGCGCAGCCGTTC
AACTTCGGCCCCTCCGCCCAGCACCAGATGACGCAGTTCTCGCTCGTCCAGGGCGGGCTGGCGGCGGCTCCGGCTCCGGC
TCAAGCCGGAGACTACAGCCTCGACTTCTCGATGAACTCCGGTTACATGGGTGCCAGCAGGGGGCCCCTTCAGTCCAATT
CGCCGCACTTCTCCAGCCAC---CACCAGCAGCAGCAGCAGCAGCGGCAGCTCCAGGACCTGGACGACGGTCCGAGCCCT
CCCTTCCTGTACGAGAACGCCGCCGCCGCCGCCCCGCA------------------TCTCACGGCGACCGCGGCGATGCA
GCTGTGGAACGGGTTCTCGCACGCCGGCATGAAGGAGAAGAGCAAGAACTGATCACCCCGATTCTCCAGCGGTAAGACTG
TC------TCGCCCCCTTATTACCATTGATTGATTGATTGATTCAAGATTAGATTCGTTATATTGGCATGGCTGCAAACT
TTTTGGCACTGCTCGAGGTGTCCTCGTGTCCTTCAAAGT---------GCACAAATCATGCTTGGGTACGAAGGACGGGT
GTCGAAATCTTAGCGGCAGGTGTCTGCATTTAGCTGAATTTGCATGGTTTGAGCCAAACAGGTGTCGATTGCTTCCCTTT
GGGAGGGGATTTTGCATCGCAGGAGACCGGCCAATCACATGGGCTGTGAATTGTGATTGCCCGGCATTTTGCATTTCCCC
TGG---TAATACAGTAATAGTAGTATGATCATCACAGTAATTCATTATCAAGGCCACAGTTGCTAGTTTTGGGCACAACC
TCTATAACAACATTTGTCAGCTTCATCTTAATGTAGTTACTGTTCATATATATCTTTGCC-----ACGACACTGATATTT
ATC--GTCATACAACTATCACAATGGACATCCTGATGTGCTTTAGCAAAACTGTTATTGAACCT-------GACAGGTCC
AACATATGCCATG-TTTTTTCCATGCATCTGGCCGCAGTCACCTAGACAATTACCCGCCCAGTCTTATTGGTTTAACGTC
GCTTGCTTCAGATGTCGGCAAAGTGGTTCCTGGTTGGTTGGTTTGGGATCTAGTAAGTGACTAAGTCTACATGTGCAGA-
---AAAAACATTTT---AGATTAAAAAAAG----------------------------CATACTAGCTATAAAAACATAG
---TTTCAGATGAGC-TT---CACCACATAAGTCTGCTATTTTTCATTTTCTACCTTAATTAGGCACCCTGAATCATCTT
CCTGCTTCCAATTTTCTATCCAATCAACACTAGGATGTGCATTCCATCAGTAGGTACAATACAAAAGCAGTAGATTGGTG
AATGTCTCTGTTCATTGTGCCTCGTTTAAAGCTTTCCGCATGCAAATTATACTGTCATTGTGCACTGCATTGACAGAGGT
GTCAAGTAGTAGTA-----
>chr5A_431
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------------------------------GTCGTGGTGCGTCGACCGCAAAGCGACCCCGCCGCCGCCGCAAAGGCCAA
GGCGAACACCGTTCCGTTCCTATTCCTACGCGCCAGCATCGACAAGTGTGTGGAGCAGAGCCAGTCAGCAGCGAGCAGCG
CTGCTG--------CCGCCGCCGCAGCTAGGCAGATCTGACAGCCCGACGCCACGGCCGGGGTCCCCCTCCAAAGCCTGC
CGCCGCCACTGTTTCCCCC--------------GCTGCCGCGT-----------------------------------GC
GAGCGAGCGAGCTCAGCTGCTGCATCGGGGGCTT----GAAAAAAAGGGCGGCGCCAAGGAACGATCAGGCAGGGGTGCG
GGTGCC----GCTGAGCTGCGGTAGCTCGTAGGGGCAGTATCGTAAAAGGCAGACGCGCCGGCTGGGCGGGGCAAATCTG
CTTGCCGGAAAAGGCCGAGCCGCGAGCCGTTG---GCGTCGCCACTCAAGCCAG------CTCCAGCCCTGACACGCGCA
CAGCGCAGCCGAAACGGCTGCTCCCCGTCCCGAGCGCAATAAAAGGCGGCCTCGCTGGCTGTCGCCGCAGCGTATGTACG
GGGCTGGATGGAGTCGGCCGACGCAGCGGGTGGGGCGGCCGGGGCCGGGGCGCCGCCGGGCCGCGG---------CAAGC
GCATGCGCGGCGCGATTGCGAGTAGGGAGACCGCCGGCGGCGACGGCATGGAGTTGGTGCCGTGGGGGTCGCCGCCGCCG
CCGGGCCAGCAGCCGCCGCAGCTCCAGGGGCCGGCCTCGCGGATCTGCCGCGTGAGGGCGTCGGGGGGCAAGGACCGGCA
CAGCAAGGTCTACACGTCCAAGGGCATCCGCGACCGCCGGGTGCGGCTCTCCGTGCCCACGGCCATCCAGTTCTACGACC
TGCAGGACCGCCTCGGCTTCGACCAGCCCAGCAAGGCCGTCGAGTGGCTCATCAACGCCGCCTCCGCCGCCATCGACGAG
CTCCCCTCCCTCGACCCGGCCGCCTTCGCCAACATGCCGGCCGACCACCAGGCCGCGCCCCGCGCCGGCAAGCAGC---A
GCAGCCGCAGGGCAGCAGGTCCCTGTGCAGCAGCACCTCGGAGACCAGCAAGGGGTCCGAGCTCTCGCTCTCGCGCTCCG
ACGGCCGCGTCGGCGGCGGCTCCTCCCGGGACAAGGAGGTCACCGTCGCCAGCAACCCCTCCGCGCAGGCCGGCTCCTTC
ACCGAGCTGCTCACCGGGGCGGGGCCGGCGT---------------CGGCCATTGCCTCCGCGGCTCCGCGCAGGCAGTC
CTGGCAGAAACAGCCGCAGCAGGCCGTTTCCGCGGTCACCGCGGACCGCGTCGGCATCGCACACCCCGGCAAAGGCAGCG
GCGCGCAGGTGGTGCCGACGTACCCCGGCTTCAGATTCGGCAATGCGCCCCCGTTCGGCCTGCAGCCGGCGCAGCCGTTC
AACTTCGGCCCCTCCGCCCAGAACCAGATGACGCAGTTCTCGCTCGTCCAGGGCGGGCTGGCGGCGGCTCCGGCTCCGGC
TCAAGCCGGAGACTACAGCCTCGACTTCTCGATGAACTCCGGTTACATGGGTGCCACCAGGGGGCCCCTTCAGTCCAATT
CGCCGCACTTCTCCAGCCACCACCAGCACCAGCAGCAGCAGCAGCGGCAGCTCCAGGACCTGGACGACGGTCCGAGCCCT
CCCTTCCTGTACGCGAACGCCGCCGCCACCGCCCCGCACCTCGCGTCGGAGAACCATCTCACGGCGACCGCGGCGATGCA
GCTGTGGAACGGGTTCCAGCACGCCGGCATGAAGGAGAAGAGCAAGAACTGATCACCCCGATTCTCCAGCGGTAAGACTG
TCAATCTTTCGCCCCGTTATTACCATTGATCGATTT--------AAGATTAGATTCGTTATATTGGCGTAGCTGCAAACT
TTTTGGCACTGCTCGAGGTGTCCTTC---------AAAGTCCCACGAAGCACAAATCATGCTTCGTCACGAAGGACGGGT
GTCGAAATCTTAGCGGCAGGTATCTGCATTTAGCTGAATTTGCATGGTTCGAGCCAAACAGGTGTCGATTGCTTCCCTTT
GGGAGGGAATTTTGCATCGCAGGAGACCGGCCAATCACATGGGCTGTGATTTGCTATTGCCCGGCATTTTGCATTTTCCC
TGCTAATAATACAGTAATAGTAGTATGATCATCACAGTAATTCATTCTCAAGGCCACAGTTGCTAATTTTGGGCACAAC-
-----------ATTTGTCAACTCCATCTTAATGTAGTTACTGTTCATATATATATCCTTGCTACAACAACACTGATGGTT
ATCAAGTCATACAACTATCACAATGGAAATCCGCATGTGCTTTAGCAAAACTGTTATTGAACAT-------GACAGGTCC
TACACATGTCATGTTTTTTTCCATGCACTCCGCTGCAGTCACCTAGACAATTACCCACTGAGCCTTATTGTTTTAACGTA
GCTTGCTTCAGATGTCGGCAAAGTGGTTCCTGGTTGGTTGGTTGGGGATCTA---AGTGACTAAGTCTAAATGTGCAAA-
---CAAACTTTTTATACAGATTAAAAAAAATGGTCTGTCTAGGGCACATCCAGATGAACATACTATCTAT-AAAAGAACT
GAATTTCAGATGTGCGTT---TACCTCATAAGTCTGCTATTTCCCCTTCTCTACCTTGATTAGGCACTCTGAATCATG-T
CTTGATTTCACTTTTCTGAACAA--AACACTAGGATGTGCATCACTAAGGTAGGTACAAAAGCC---------------G
AATGTTTCTGTTCACTGTGCATCGTTTAAAGC-TTCCGCGTGCAAATTATACTGTCATTGTGCACTGCATTGACAGAGGT
GTGAAGTAGTAAGTATCAG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------S--------
--------------------------S----------S---------------------------S--S-----------
---------S------------------------------------------------S---------------------
-------------S----SSSSSSSSSSSSSSS-----------------------SS-SS----------------S--
--------------------------------------------------------------------------------
-----------------------------------S--S------------------------------S----------
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---S--------------------------S------S------S-----------------------------------
-------------------------------------------------------------------------S----S-
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---------------------------------------S-----------S----------------------------
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---------------------------S---------------------------------------S------------
---------------------------------------------------------S----------------------
-------S------S-----------------------------------------------------------------
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----------------------------------------------------------------S---------------
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--------------------------------------------------------S-----------------------
---------------S----------------------------------------------------------------
------------------------------------S--S----------------------------------------
-------S-------------------------------------SS---------------------------------
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---------------------------------------------------------------------------S----
--------SS-S-SSSSS--------------------------------------------------------------
-S-----------------------------------------------S---------S--------S-----------
S----------------------S--S----------------------------------S-SSSSSSSS---------
S----------------------------S---------S----------S-----------------------S-----
-------------------------------------------------------------------------------S
SSS--------------------------S-------------------------------------S------------
------------------SSS-------------------------------------S----S----------------
--------------------------------------------------------------------------SS----
--------------------------------------------------------------------------------
--------------SSSS-
>forward_328
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--------------------------------------------------------------------CACGAACTGATA
CAAGCGCG------------------------------------------------------------------------
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>reverse_1628
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---------------------------TGGACAAGGAGGTCACCGT----------------------------------
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>forward_374
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----------------------------------ACACGGGCACATGTGTTAGT--------------------------
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>reverse_2065
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----------------------------------------------------------------GCCCTTCAGTCCAATT
CGCC----------------------------------------------------------------------------
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>forward_404
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----------------------------------------------------------------AGTGAAAAGTCGGACC
GAGC----------------------------------------------------------------------------
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>reverse_2408
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-------GCTGCTCGAGGTGTCCTC-------------------------------------------------------
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-------------------
