>input_sequence_57344
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--------------------------------ACCCTACGTATCATCGTGTAGTTTGGCTCGCTCACGGCTGACGCGTCG
CGAGAACTAACCCCATCCTAAATCTTCCCCA------ATCCAGGCGACAAGGATCTGGCCATGGCGCCGCTGCCCACCGC
CGCCGCGGCCGTCCGTTGCCACCCGCACATCCTCCGCAGGGGCCTCCTGCCCGCTTCGTCCCCGCTGCTCCCCTTCGCCT
CCCGGGTGGCCTCCTCCACGCCGCTCCGCGCCCAGCCCCTGCGCTTCTCGCTCTCCCCCGTCCCCAAGAGCATCTCCTCC
TCCTCGGCCTCCCACATCCCCGTCCGCTATCTCTTCACCGGGATCGTCGAGGAGGTCGGCCGCGTGCGCCGCATCGGCCC
GCCGCCCACGCCTACTGGGGGCGGGGGTGGGAGCGGGGGAGACGCTCCCGGTGTCGACCTCGAGGTCGAGACCAAGAACC
TCCTCGCCGGGACGCAGCTAGGCGACAGCATCGCCGTCGACGGGACGTGCCTCACCGTGGCGGCCATCGACACCGCTGCC
TCCACGCTCACCTTCGGCGTCGCGCCGGAGACCCTCCGGTGCACGTCACTCGGCGAGCGCGTCGCGGGCGACGACGTCAA
CCTCGAGCGCGCGCTCACGCCGGCGTCTCGCATGGGCGGGCACTTCGTCCAGGGCCACGTCGACGGCACCGGCGAGATCG
CCGCGTTCCGGCCCGAGGGCGATTCTATCTGGGTCACCGTGCGCGCACCGCCAGAGATCCTCAGCTTGCTCGTGCCCAAG
GGGTTCGTCGCCGTGGACGGGACCAGCCTCACCGTCGTCAATGTGAACGAGGAGGAGGGGTGGTTCGACTTCATGCTTGT
GCGCTACACGCAGGACAATGTTGTGCTGCCCAGGAAGAAGGTTGGGGATAAGGTGAACCTTGAGGCTGACATACTGGGGA
AGTATGTAGTGAAGCTACTTGCCGGGAGATTGGAGGCAACATCGAAAGCAAATTCTTGAGCTGCGCCTGTTGGACTGATG
AACTAGTATCAGTATTAGTGCAGTGTATTCTTGTCTATCAATAATGGTGCATTTTTTGCACTAATGAGTGAAGCTT-TTT
TCGTACTA-GGGGGGTTATATAGTTCATGCCACTGCCTGTTTCCATGTAAAAGTTGTAGCGTTTCCGCATGGAGATGCTT
TTTTCCGGTGTGCATGATCTGTGTAACCCCAAGCAAATGAACAAGATTTGTTTAG-------------------------
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>chr5A_1_TraesCS5A01G093800
GAAGTAGCACATCTGCCGCAAATCGTGCACA--ACTCCATTGCTGCTCCTCGTCGGCATCATGATTTAGCCTCTGAGCAA
AACTGATCTGGCCATGCACATTTCTCTCTCTCCCCCATACGTGAGCAGCAGCGGCCAGCAAGCCCACGCTGGCGTCCACC
CCTGCCCATCCCTCTCTACTCTCTCCCTACACCTCCAAACGACCCTCACCATGATCACCCC-AGCCATGGCAGATAGCAC
CTTCCTTTGAGCTCCTCCCCGTGTACAGCCCCTCACCATGATCCACCATCCCGCCTTTCCATTTCTCTCCTCCGGACAAG
GCCCTCTGTTTTGCACTTCTGCTTGATTTGAGAAAAA-TCAGGGGAAGGGAACGAACCTGTGACGCATATGAGAAGAA--
------TAGTGGCGGATCGGCGGAGGAGGCGAGAGGTGTCGAGGTCGGCCGAGGTTCGTCTCCTTGCCGTCAGGTCACGA
TGGAGCACGGGAGTGATCTGCGTCTAGGGCGAGTAATTTTATTTTTATTTTTATAAGGCAAGTACCTATCGGTGGGCTGG
TTTTCAGGCAGAAAATCGGATGCGATATGATAACGTGCAGAGAAATTAAAATCT--------------------------
------GTGAAGGGGGTGGACGAAGAAAGGAGTTTGATGACCGTCATTAATGAATTGATTGCCATGCATGAACTGATTCC
GTTTGGATTGATTGCGTCTCGTTACCTTATGTGAATTACGTTTACCAA-------------AAACAGAGGGACAAAACCG
GTGGAGGGGGAAAGAAAATCGCTACAGGGGAGAAAACCGA---------------TGGAGGGGGACAGAAAATCGCTACA
GAGAGAGGGGGTCGTAGTACGAGAGGTTGGACGAAAAGGGGAACGTAAGAGGGGAAACGGCACACTACGTTTCTTTTAGG
TAGTAGAGAAGATTTCTCCCGGCCTGACGTTATATAACCCGACCCGTACAGAAACGAGACGGCCATTCCTTCCGCAAACT
TGCGTCGTTCACGTATGCCACGGAATACGCCTACCCTACGTATCATCGTGTAGTTTGGCTCGCTCACGGCTGACGCGTCG
CGAGAACTAACCCCATCCTAAATCTTCCCCA------ATCCAGGCGACAAGGATCTGGCCATGGCGCCGCTGCCCACCGC
CGCCGCGGCCGTCCGTTGCCACCCGCACATCCTCCGCAGGGGCCTCCTGCCCGCTTCGTCCCCGCTGCTCCCCTTCGCCT
CCCGGGTGGCCTCCTCCACGCCGCTCCGCGCCCAGCCCCTGCGCTTCTCGCTCTCCCCCGTCCCCAAGAGCATCTCCTCC
TCCTCGGCCTCCCACATCCCCGTCCGCTATCTCTTCACCGGGATCGTCGAGGAGGTCGGCCGCGTGCGCCGCATCGGCCC
GCCGCCCACGCCTACTGGGGGCGGGGGTGGGAGCGGGGGAGACGCTCCCGGTGTCGACCTCGAGGTCGAGACCAAGAACC
TCCTCGCCGGGACGCAGCTAGGCGACAGCATCGCCGTCGACGGGACGTGCCTCACCGTGGCGGCCATCGACACCGCTGCC
TCCACGCTCACCTTCGGCGTCGCGCCGGAGACCCTCCGGTGCACGTCACTCGGCGAGCGCGTCGCGGGCGACGACGTCAA
CCTCGAGCGCGCGCTCACGCCGGCGTCTCGCATGGGCGGGCACTTCGTCCAGGGCCACGTCGACGGCACCGGCGAGATCG
CCGCGTTCCGGCCCGAGGGCGATTCTATCTGGGTCACCGTGCGCGCACCGCCAGAGATCCTCAGCTTGCTCGTGCCCAAG
GGGTTCGTCGCCGTGGACGGGACCAGCCTCACCGTCGTCAATGTGAACGAGGAGGAGGGGTGGTTCGACTTCATGCTTGT
GCGCTACACGCAGGACAATGTTGTGCTGCCCAGGAAGAAGGTTGGGGATAAGGTGAACCTTGAGGCTGACATACTGGGGA
AGTATGTAGTGAAGCTACTTGCCGGGAGATTGGAGGCAACATCGAAAGCAAATTCTTGAGCTGCGCCTGTTGGACTGATG
AACTAGTATCAGTATTAGTGCAGTGTATTCTTGTCTATCAATAATGGTGCATTTTTTGCACTAATGAGTGAAGCTT-TTT
TCGTACTA-GGGGGGTTATATAGTTCATGCCACTGCCTGTTTCCATGTAAAAGTTGTAGCGTTTCCGCATGGAGATGCTT
TTTTCCGGTGTGCATGATCTGTGTAACCCCAAGCAAATGAACAAGATTTGTTTAGTTGTTCATCCCATGAGTCCAGCATT
TCTGGGACAAAAATGAATACTAGTGCTCGTTTGAGTTTATATTTGATCATTGCCTGACCTACATTT--------CTGGTA
CCTGA-TTAATATGGCATGCACTCTCGGTTGCTAACTTGCTATATTGAATTTGTGATGAAG--------ATGTGTGTTGC
CTAAGAAGACTGCATTCTACCTTTGTGTAATTTATCACATGAATTTGTTCTGCCAG-ATGATAATTAAAAATTATT----
CACAAAATAACTATCAATATAGACTAGTGTATTATTTCTAGATGGCTTAAAGTTTATCTTTTGT-AATGCAAATACTGAA
CTGGATTGTGGTGTTGGCTTACATCTGTGGTGTTGG-------------------TCTTTGTATACTTAACATGAAATGT
TGGTAATTCAATAACACTTCTTATTCTCTGAAGTTTTAGAATGGATATATGGGATGTTTGGATTAAGTTGCCTCACTAAC
CTTTTACATGGAAACGGGGGCACTTACTAGTA----GGGGATGAATGGAACTACTGAATTTAA-TTCAGTAACTCTGACC
TTTGGCTTTCGTGTGTGTGGTGAACCAGAAGAAACATTAGCAATTTCCTTGAATGTGTGTGTTTGGTCCTAGAAGGTA--
--------------------------------------------------------------------------------
---ATATTGTAAGGTTATTTCAGATGCCACTTGGTAATTTAGGAATTGTGATTAGTTATACTATGACTATTAAGTACATC
ATCGCCCGAGGAAACTATGTTGGTTTCTCCTTCCTCCATGACCATCACTTGAGGAAAACTAGTGCTATTAGCTGACAAAA
TGTGGACACGCGCAATGCTAAAGTGTAGTTAGTATATGTCGAGTATCCACGTGTATTGGCTACTCATAATGCGCAAGTCA
TGAGAAGCAATGCAAAAATCATGTGTAGGAGCAACATCTCTCTGTGTTTTGTAGAATGACAACAACTTCAAGTAAAGCAG
CACAATCTCCCTGACTTTCTGTAAGAGCAAAATGGTGCATTGCTGTATCTTCGCTCTCGCTTTTTCC
>chr2D_1
GAAGTAGCACATCTG-CGCAAATCGTGCACAGTACTCAATTGCTGCTCCTCGTCGGCATCACGATTTAGCCCCTAGGTAA
AACTGCTCTGGCCCTGCACCTTTTACTCTC-CCCCCATACGTGAGTAGCAGCGGCTAGCAAGCCCACGCCGGCGTCCACC
CCCGCCCGTCCCTCTCTACTCTCTCCCTACACCTCCAAACGACACTCACCATGATCACCCCCAGCCATGGCAGATAGCAC
CTTCCTTTGAGCTCCTCCCCGTGTACAGCCCCTCACAATGATCCACCATCCCGCCTGTCCATTGTTCTCCTCCGGACAAG
GCCCTCTATTCTGCACTTCTGCTTGATTTGAGAAAAAATCAGGGGAAGGGAACGAACTTGTGACGCGGATGAGAAGAAAT
GAAGAATAGTGGCGGATCGACGGAGGAGGCGAGAGGTGTCGAGGTCAGCCGAGGTTCGTCTCCTTGCCGCCAGGTCATGA
TGGAGCACGGGAGTGATCTGCATCTA--------AATTTTATTTTTGTTTTTATAAGGCAAGTACCTATCGGTGGGCTGG
TTTTCAGGCAGAAAATCGGATGCGATATGATAACGTGCAAAGAATTGATTGCCATGCATGAATGAATTGATAACGCGCGT
CTAGCCGTGGAGGGGGTGGATGAAGGAAGGAGTTTGATGACCGTCATGAATGAATTGATTGCCATGCATGAATTGATTCC
GTTTGGATTGATTGCGTCTCGTTACATTATGTG-------------AA-------------AAACAGAGGGACAAAACCG
GTGGAGGGGGAAAGAAAATCGCTACAGGGGAGAAAACCTGTAAGGAGAAAACCGGTGGAGGGGGAAAGAAAATCGCTACA
GGGAGAGGGGTTCGTAGTACGAGAGGTTGGACGAAAGGGGAAAGGTAAGAGGGGAAACGGAACACTACGTTTCTTTTAGG
TAGTAGAGA-----------------------------------------------------------------------
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>chr6D_1
GAAGTAGCACATCTG-CACAAATCGTGCACAGTACTCCATTGCTGCTCCTCGTCGACATCACGATTTAGCCCCTAGGTAA
AACTGCTCTGGCCCTGCACCTTTTACTCTC-CCCCCATACGTGAGCAGCGGCGGCCAGCAAGCCCACGCTGGCGTCCACC
ACCGCCCGTCCCTCTCTACTCTCTCCCTACACCTCCAAACGACACTCACCATGATCACCCCCAGCCATGGCAGATAGCAC
CTTCCTTTGAGCTCCTCCCCGTGTACAGCCCCTCACAATGATCCACCATCCCTCCTGTCCATTGTTCACCTCCGGACAAG
GCCCTCTATTCTGCACTTCTGCTTGATTTGAGAAAAAATCAGGGGAAGGGAACGAACTTGTGACGTGGATGAGAAGAAAT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AAGAATTGATTGCCATGCATGAATGAATTGATAACGTGCGT
CTAGCCGTGGAGGGGGTGGATGAAGGAAGGAGTTTGATGACCGTCATGAATGAATTGATTGCCATGCATGAATTGATTCC
GTTTGGATTGATTGCGCCTCGTTACCTTCTGTG-------------AATTACGTTTACCAAAAACAGAGGGACAAAACCG
GTGGAGGGGGAAAGAAAATCGCTACAGGGGAGAAAACCTGTAAGGAGAAAACCGGTGGAGGGGGAAAGAAAATCGCTACA
GGGAGAGGGGTTCGTAGTACGAGAGGTTGGGCGAAAGGGGGAACGTAAGAGGGGAAACGGAACACTACGTTTCTTTTAGG
TAGTAGAGA-----------------------------------------------------------------------
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>chr5D_936
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-----------------------------------------------ACAGAAACGAGACGGCCATTCTTTCCGCAAACT
TGCGTCGGTCACGTATGCCACGGAA-----------TACGTATCATCGTGTAGTTTGGCTAGCTGACGGCTGACGCGTCG
CGAGAACTAACCCCATCCTAAATCCTCCCCA------ATCCAGGCGACAAGGATCTCGCCATGGCGCCGCCGCCCACCGC
CGCCGCGGCCGTCCGTTGCCACCCGCACATCCTCCGCAGGGGCCTCCTGCCCGCTTCGTCGCCGCTGCTCCCCTTCGCCT
CCCGGGTGGCCTCCTCCACGCCGCTCCGCGCCCAGCCCCTGCGCTTCTCGCTCTCCCCCGTCCCCAAGAGCATCTCCTCC
TCCTCGACCTCCCACATCCCCGTGCGCTCCCTCTTCACCGGGATCGTCGAGGAGGTCGGCCGCGTGCGCCGCATCGGCCC
GCCGCCCACGCCTCCTGGGGGCGGGGGAGACGCG---------GCTCCCGGTGTCGACCTCGAGGTCGAGACCAAGAACC
TCCTCGCCGGGACGCAGCTGGGCGACAGCATCGCCGTCGACGGGACGTGCCTCACCGTGGCGGCCATCGACACCGCTGCC
TCCACGCTCACCTTCGGCGTCGCGCCGGAGACCCTCCGGTGCACGTCACTCGGCGAGCGCGTCGCGGGCGACGACGTTAA
CCTCGAGCGCGCGCTCACGCCGGCGTCTCGCATGGGCGGGCACTTCGTCCAGGGCCACGTCGACGGCACCGGCGAGATCG
CCGCGTTCCGGCCCGAGGGCGATTCTATCTGGGTCACCGTGCGTGCGCCGCCAGAGATCCTCAGCTTGCTCGTGCCTAAG
GGGTTCGTCGCCGTGGACGGAACCAGCCTCACCGTCGTCAATGTGAACGAGGAGGCCGGGTGGTTCGACTTCATGCTTGT
GCGCTACACGCAGGACAATGTTGTGCTGCCAAAGAAGAAGGTTGGGGATAAGGTGAACCTTGAGGCTGACATTCTTGGGA
AGTATGTAGTGAAGCTACTTGCCGGGAGATTGGAGGCAACATCAAAGGCAAATTCTTGAGTTGTGCCTGTTGGACTGATG
AACTACTATCAGTATTAGTGCAGTGTATTCTTGTCCATCAATAATAGTGCATTTTTTGCACTAATGAGTGAAGCTTTTTT
TCGTACTA-GGGGGGTGATATAGTTCATGCCATTGCCTGTTTCCATGTAAAAGTTATAGCGTTTCCGCATGGAGAAGCTT
TTTTCGGGTGTGCATGATCTGT-TAACCCCATTCAAATGAACAAGATTTGTTTAGTTGTTCATACCAGGAGTCCAGCTTT
TCTGGGACAACAATGAATGCTAGTGCTCGTTTGAGTTTATATTTGATCATTGCCTGACCTATATTGTTTGAAGGCTAGTA
CCTGA-TT-ATACGGCATGCACAATCGGTTGCTATT--------TTGAATTTGTGATGAAG--------ATGTGTGTTGC
CTAAGAAGACTGCATTCTACCTTTGTGTAA-TTATCGCATGAATTTCTTCTGCCAGGATGATAATTTAATCCGTTACTCA
CAAAAAAAAACTATCAATATGGACTAGTGTATTATTTCTATATGGCTTAAAGTTTATCGTTTTG-TATGCAAATACTGAA
CTGGATTATAA-------------------TGTTGG-------------------TCTTTGTACACTTAACATGAAATAT
TGGTAATTCAATAACACTTCTTATTCTCTGAATTTTGCGAATGGAACCATGTGATGTTTGGATTAAGTTGCCTCACGAAC
CTTTTAGATGGAAACAGGGGCACTAACTAGTAACTCTGGGATGAATGGAACTATGGAATTTAATTTCAGTAACTCTGACC
TTTGGCTTTCGTGTGTG--GTGAAGCAGACAAAACATTTGCAATTTCCTTGAA---------------------------
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>chr5B_946
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---------------------------------------------------------GACGGCCATTCTTTCCGCAAACT
TGCGTCGGTCACGTATGCCACGGAATACGCCTCCCCTACGTATCATCGTGTAGTTTGGCTAGCTCACGGCTGACGCGTCG
CGAGAACTAACCCCATCCTAAATCTTCCCCAACCCCAATCCAGGCGACAAGGATCTCGCCATGGCGCCGCCGCCCACCGC
CGCCGCGGCCGTCCGTTGCCACCCGCACATCCTCCGCAGGGGCCTCCTGCCCGCTTCGTCGCCGCTGCTCCCCTTCGCCT
CCCGGCTGGCCTCCTCCACGCCGCTCCGCGCCCAGCCGCTGCGCTTCTCGCTCTCCCCCGTCCCCAAGAGCATCTCCTCC
TCCTCGACCTCCCACATCCCCGTGCGCTCCCTCTTCACCGGGATCGTCGAGGAGGTCGGCCGCGTGCGCCGCATCGGCCC
GCCGCCCACGCCTCCTGGGGGCGGGGGAGACGCG---------GCTCCCGGTGTCGACCTCGAGGTCGAGACCAAGAACC
TCCTCGCCGGGACGCAGCTGGGCGACAGCATCGCCGTCGACGGGACGTGCCTCACCGTGACGGCCATCGACGCCGCTGCC
TCCACCCTCACCTTCGGCGTCGCGCCGGAGACCCTCCGGTGCACGTCACTCGGCGAGCGCGTCGCGAGCGACGACGTCAA
CCTCGAGCGCGCGCTCACGCCGGCGTCTCGCATGGGCGGGCACTTCGTCCAGGGCCACGTCGACGGCACCGGCGAGATCG
CCGCGTTCCGGCCCGAGGGCGACTCTATCTGGGTCACCGTGCGTGCGCCGCCAGAGATCCTCAGCTTGCTCGTGCCCAAG
GGCTTCGTCGCCGTGGACGGGACCAGCCTCACCGTCGTCAATGTGAACGAGGAGGCCGGGTGGTTCGACTTCATGCTTGT
GCGCTACACGCAGGACAATGTTGTGCTGCCCAGGAAGAAGGTTGGGGATAAGGTGAACCTTGAGGCTGACATACTGGGAA
AGTATGTAGTGAAGCTACTTGCCGGGAGATTGGAGGCAACGTCAAAGGCAAATTCTTGAGCTGTGCCTGTTGGACTGATG
AACTACTATCAGTATTAGTGCAGTGTATTCTTGTCCATCAATAATAGTGCATTTTTTGCACTAATGAGTGAAGCTT-TTT
TCGTACTAGGGGGGGTTTTATAGTTCATGCCACTGCCTGTTTCCATGTAAAGTTATAAT-GTTTCCGCATGGAGAAGCTT
TTTTCCGGTGTGCATGATCTGTGTAACCCCATTCAAATGAACAAGATTTGTTTAGTTGTTCATACTAGGAGTCCAGCTTT
TCTGGGACAACAATGGATACTAGTGCTTGTTTGAGTTTATATTTGATCATTGCCTGACCTATATTT--------CTGGGG
CCTGATTTAATATGGCATGCACTGTCGGTTGCTATT--------TTGAATTTGTGATGAAGCACGGAAGATGTGTGTTGC
CTAAGAAGACTGCATTCTACCTTTGTGTAATTTATCGCATGAATTTGTTCTGCCAG-ATGATAATTAAAAATTATT----
CACAAAATAACTACCAATATAAAATAGTGTATTATTTCTATATGGCTTAAAGTCTATCTTTTTGTAATGCAAATACTAAA
CTGGATTATGG-------------------TGTTGGCTTACATCCGTAGTGTTGGTCTTTGTATACTTAACATGAAATGT
TGGTAATTCAATAACACTTG---TTCTCTGAAATTTTAGAATGGAACTATTGGATGTTTGGATTAAGTTGTCTCACTAAA
GTTTTACATGGAAATGGGGGCCCTTACTAGTA----TGGGATGAATGGAACTACGAAATTCAA-TTCAGTAACTCTGACC
TTTGGCTTTCGTGTGTG--GTGAACCAGAAGAAACATTAGCAATTTCCTTGAATGTGTGTGTTTGGTCCTACTCCCTCCG
TTCCAAAATAGATGACGCAACTTTATACTAACTTTAGTATAAAGTTGAGTCATCTATTTTGGAACGGAGGGAGTAGAAGG
TAGATATTGTAAGGTTATTTCAGATGACACTTGGTAATTTAG--ATTGTGATTAGTTGTACTATGACTATTAAGTACATC
ATCACCCGAGGAAACTATGTTGGTTTCTCCTTCCTCCATGACCATCACCTGAGGAAAACCAGTGGTATTAGCTGACAAAA
TGTGCACATG-GCAATGCTACAGCGTAGTTAGTATATGTCGAGTATTCACGTGTATTGGCTACTCATAATGCGCAAGACA
TGAGAAGCAATGCAAAAATCATGTGTAGGAGTAACATCTCCCTGTGTTTTGTAGAATGACAACTACTTCAAGTAAAGCAG
CACAACCTCCCTGACTCTCTGTAAGAGCAAAATGATGCATTTCTGTATCTTCGCTCTGGCTTTTT--
>SNPs
---------------S---------------------------------------------S---------S--SS-S--
-----S-------S-----S---SS-----S-------------------------------------------------
--S----S-----------------------------------S------------------------------------
------------------------------------S-------------------S------SS---------------
-------S--S----------------------------------------------S--------SS------------
-------------------S--------------------------S----------------------S-------S--
---------------------S----SSSSSSSS------------S---------------------------------
---------------------------------------S----S-S-SSSS-S--------------------------
---------S----------S----S---------------------S------------------------S-------
---------------------------------SSSSSSSSSSSSS----------------------------------
--------------------------------------SS-------------------------S--------------
-S--------S-------------------------S-----------------------S-------------------
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S-----------
-------S------------------------S---------------------------S-------------------
--------------------------------------------------------S-------------S---------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
------S----------------S----SS--------------------------------------------------
-------------S-------------S-SSSSSSSSSSSSSS-------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--S---------------------------------
-------------------------------------------------------SS-----------------------
--------------------------------------------------------------------------------
-------------------------------------------S--S----------------S----------------
-----S-----------------------------S---------S----------------------------------
-------------------------------------------------------S-------------------S----
-------------------------------SS------------------------------S---S---------S--
----------S--------------------------------------------------S------------------
-----------------------S----------SSSSSSSSSS------------------------------------
------------------------------------S-------------------------------------------
----------------------------------------S---------------------SS----------------
-------S---SSSSSSSSSSSSSSSSSSS--------------------------------------------------
--------------------------------S------------SS---------------------------------
------------------------------------S-----------------S-------------------------
-----------------SS----------------------------------------------------SSSSS-S--
--------------------------------------------------------------------------------
--------------------------S---------------SS-------------S----------------------
---S--------------------------------------------S----------S----S---------------
----S---S-S---------S--S----------------------S------------------------------S--
-------------------------------S--------S----------------------S----------------
-----S----------S-----------------S------S---------------S-------SS
>forward_510
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----------GAGTGATCTGCGTCTAGGGC--------------------------------------------------
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>reverse_1896
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-------------------------------------------------------AGGGGTGGTTCGACTTCATG-----
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>forward_994
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--------------TCTCCCGGCCTGACGTTATA----------------------------------------------
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>reverse_2064
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---------------------------------------------------------------CGCCTGTTGGACTGATG
AAC-----------------------------------------------------------------------------
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>forward_1029
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-------------------------------------------------AGAAACGAGACGGCCATTCC-----------
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>reverse_3124
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---GCCCGAGGAAACTATGTTGGT--------------------------------------------------------
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