>input_sequence_57317
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-------------------------------------------------------------GTCCGCCGCCGCCGCCACC
CACCTCTTCTCCCAAACGCTCA-ACCCTACTTCTCCGACCATGGCCAAGAAGCGCGGCGAGAAGAGGTCGGCACCACCAC
CGCCACCGCCGCCGGCTGCCTCCTCTGAGGAGACGCACTCGGGCGCAGACGAGTCCGAGGACGAAGAGACCATCGCCGTG
TCTCGTACCCCTGCCCCCAAGAACCCGCCCCCGCAGCCGCAGAAGGGCGAGGAGTCCGAGACCTCTGACGAGGAGGAGGA
GGAGGAGCCATCCCCCGCGGCCCCGAACACTGCCCCCAAGAAGCAGCCTCCGCCGGCGCGACAGAGCGAGGACTCCGACA
GTTCCGACGACGAGGAGGATGGGGGTTCCGAATCTGACAAAGATGCGCCGCCGCCGAAGCCATCTCCGAAGCAAGAAGCG
AAGGCCCCGGATGCCAAGAAGCCGCGCCTGGCTTTCCACCGCGTCTGGTCCACCAACGACGAGGTCCGTATCCTCCAGGC
CCTCGCCGCTCACCAAAAGGAGCACGGCGTGCTGCCGCAGCCCGACGCTCTGGTCGAAGCCCTCGCCGGAAAGCTCGACA
ACCGTGCCTACAGCAGCAAGGAGCTCCAGGGGAAGGTCAAAAGCCTCAAGCATCGGTATGTGTCAGCCGCCAAGAAGCAC
GAGCTCCCGACCAAAGAACACGACCGCCGGCTCTTCGACCTCTCCAAGATCCTCTGGAGCGGCCACAAGTACAGGGCCCG
TGCTGCCACCGCTTCTACTGCTGCTGCCACC---GCCAAGGCGAACAACCACGAGCCCAAGGGATTTGAGGAGATGTGTG
AGTTGTACCCGTACCTCGCGGAGGAGGTGAAGAAGA------------------GCATGTTCAAGCGGGAGTTCGGAAAG
ATGGACGACGACAAGGCACGCTTGCTGGACGAGAAGATCAAGAAGCAGAGGGTACAGCAGATGAAGGTGGAGCTTCGCCG
CAGCGACCTTGCCAGGGAGGTGACCAAGGCGATAATGGACCTGATCGACTGATGGGAGTGGGATGAGCTTATCTGAAACT
GTATCGATGATCACCCGAAATTGGTGACAACGTGAGCATCCTAGAATTGGTAAATTGTGCCGTG-TTTGATGGTAAGAAT
GTTTTTGCGGCAAGAGAGTGTGATCACTGGTTCCGTCAAATAGTGTTAGGTTAAGAGATGCTAGCTGAATGGGTTAGTTC
AGTAAAGATGTTCTGCTGTT------------------------------------------------------------
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>chr7D_1_TraesCS7D01G201700
GAATTGGATGTCTATGTATATGTGCGTTTAGAAAATTCCGAGATGAAGCACCGCTAACGTTTGCATTGTATATTTTGCTT
CTTATAAAGTTTCTGCGATGGAGCATTGCATTGCTATTTTTCTTGTTATAATTGACTATATTTTTCTTGTTGATATCATG
TCAAAATGGTGATGTTTTATTAACCGAATTATTTGGTGAGTATAGAGCAACCAAACAACTGCAGTTGCATATACTCAGCA
CGTCTGCACTCGGTATGTCTCAAAGGAGAACAACCATGCTAATGTGAGAACAACTACTAAACACATCCTTAATTGCGCTC
TTTGACACCAATGGTACATTAAAATTGGTGAAGATGTCGGACCCGCGGTGCTAATGTAAGAAGTTTTTCTTTCTTTCTTC
CTCTTTTTTAGATTTTCTTTTAGATGAATCTTCCTCTCGTTTAGCTTGTCCTCATCCTACCACCATGAGGCTGCGCATAG
CAACTTGTTGTGTTGTTGGTGCCCTAGAAAAACTTGTTGAGTTGACAGCGTTGCTGGCTGCAAATTTGCACTATTCGGTT
GAGAATAATCAATAATGTTAGAACCATCCCTTAAAAAAAAGATGTTAGAACCATCACCACCAGCGTCCGTGATGGATAGA
TGACGAGACAAGGCCTGTGTTAACTCGTTTACTGTGAGAGCTCCAGCTGCTTCCTGCTAAACCTATGTGGTGCTTCCTGC
CTAAGCAGACCGCACGTCGATATAATGTTTTCTGTGGATGGTGTTGGAAGGAATTTGAACATAAATCACCTTAAATTGTA
AAGGAGAAACCCCGCCAAAAAATGGAAAGGAGAAAAATGTTATTTCAACA--TTTGGGTTGGGCTGGCTGAGATGGGCCC
CCTTTTTTATATAAGTGG---AGACGGGCCAGCTGAAACC-------AGAGGAAGCCCATCTGGGCCTTATAAGCCCGAC
TGTTGTCCTGACGAAAGGACACCCGAC--------ACCCGAAGAAGGGAAACCCCACCTT-GTCCGCCGCCGCCGCCACC
CACCTCTTCTCCCAAACGCTCA-ACCCTACTTCTCCGACCATGGCCAAGAAGCGCGGCGAGAAGAGGTCGGCACCACCAC
CGCCACCGCCGCCGGCTGCCTCCTCTGAGGAGACGCACTCGGGCGCAGACGAGTCCGAGGACGAAGAGACCATCGCCGTG
TCTCGTACCCCTGCCCCCAAGAACCCGCCCCCGCAGCCGCAGAAGGGCGAGGAGTCCGAGACCTCTGACGAGGAGGAGGA
GGAGGAGCCATCCCCCGCGGCCCCGAACACTGCCCCCAAGAAGCAGCCTCCGCCGGCGCGACAGAGCGAGGACTCCGACA
GTTCCGACGACGAGGAGGATGGGGGTTCCGAATCTGACAAAGATGCGCCGCCGCCGAAGCCATCTCCGAAGCAAGAAGCG
AAGGCCCCGGATGCCAAGAAGCCGCGCCTGGCTTTCCACCGCGTCTGGTCCACCAACGACGAGGTCCGTATCCTCCAGGC
CCTCGCCGCTCACCAAAAGGAGCACGGCGTGCTGCCGCAGCCCGACGCTCTGGTCGAAGCCCTCGCCGGAAAGCTCGACA
ACCGTGCCTACAGCAGCAAGGAGCTCCAGGGGAAGGTCAAAAGCCTCAAGCATCGGTATGTGTCAGCCGCCAAGAAGCAC
GAGCTCCCGACCAAAGAACACGACCGCCGGCTCTTCGACCTCTCCAAGATCCTCTGGAGCGGCCACAAGTACAGGGCCCG
TGCTGCCACCGCTTCTACTGCTGCTGCCACC---GCCAAGGCGAACAACCACGAGCCCAAGGGATTTGAGGAGATGTGTG
AGTTGTACCCGTACCTCGCGGAGGAGGTGAAGAAGA------------------GCATGTTCAAGCGGGAGTTCGGAAAG
ATGGACGACGACAAGGCACGCTTGCTGGACGAGAAGATCAAGAAGCAGAGGGTACAGCAGATGAAGGTGGAGCTTCGCCG
CAGCGACCTTGCCAGGGAGGTGACCAAGGCGATAATGGACCTGATCGACTGATGGGAGTGGGATGAGCTTATCTGAAACT
GTATCGATGATCACCCGAAATTGGTGACAACGTGAGCATCCTAGAATTGGTAAATTGTGCCGTG-TTTGATGGTAAGAAT
GTTTTTGCGGCAAGAGAGTGTGATCACTGGTTCCGTCAAATAGTGTTAGGTTAAGAGATGCTAGCTGAATGGGTTAGTTC
AGTAAAGATGTTCTGCTGTTATTAGTTTTCATAGCTCGTTCATACAGGTTGTTCTTGGTCTTTTGAGTGTTTCAGATTCC
AGGTGCGGATTAGATTTCGCTTTTGAATATTTCAAAGGTATAGACAGGAGTCATAAGTCT-GAATTCGATGACTGTTATG
GATCACCGGATTGTGTTTTGCATTGTGGTGGATTACTGCTCTCCTCGCTAATCTGC---TAGTTTTTTGTTCGTTCATGA
ATGGATCCCCATGTTCTGATATCGATGACTGTTAAGGTTCTCAGGCTTTATTTTGCATTGCAGTGGATTTTGCTGACCTT
GCCTGTTTGCGTTGTTTTTCTTGTCTATTTTTCTGTATTTTAACAAGAAGATGTTTTTCTTGTCTATTTTTCTGTATTTT
AACAAGAAGATGTTTTTCTTGTCTATTTTTCTGTATTTTAACAAGAAGAGCTCTATTTCAGCTATATGGGTTAGTCGTGC
CTTGTTTGTGCTGGAGGTCACCAACTCCTGATCAGTGGCCACCGCGGTGCTGAATCCTGCAAACCAAGGAGGCCCTACAT
GAATCCTTCGCCCGCAATTTGGTGAATTTTGTGCTCTCTCCTGTCTTTCCGTCACCCTTTCTATTCTCAGCTCTCACGAT
TGAATCAGCCACAAGTGAATTAGGCATAGAATACTTGCAGGCCATGGACCTGGTGCTTTCCCATTGCTTTAATCTCTCTT
CTCAAGTGCATCAAACTACGGAAAGAAGATGAACATCTTCAAGTTTTTCCCAGCCCCATCTCAAGCTGCTATGTTGCGGA
TGCAACACCACTCCTCCGATTGTGCGCGAATCTTGGTGCGAGGACATAATCGTTTGCTTTGATTCTATTTTTTCCGTGAC
ATAGCATCATCCCAGCATAGTTGCTCTAATCTCCCCCCGATCCCATTTTTTCAGATAGCAACTTTCTGTG-TTTTGTCCA
TTTAAATCCTGACAATTTTTCTGTTTCTTTAGACTTTTATACCTGGCAATTATATATGCTATAGC
>chr7A_819
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------------------AAACTGGAAAGGAG-AAAATGTTATTTCAACA--TTTGGGTTGGGCTGGATATAATACTGAC
ACGAAAATGCATGAATAAGGCCGACC--------GAAACCAATAGAAAGAGGAAGCCCACCTGAGACTTATAAGGCCGAC
TG-TGTCTTGACGAAAGGACACCCGATGTCCCGATACCCGAAGAAGGGAAACCCCACCTT-GT---CCGGCGCCGCCACC
CACCTCTTCTCCCAAAGGCTCA-CCC-TACTTCTCCGACCATGGCCAAGAAGCGCGGCGAGAAGAGG------------C
CGCCACCGCCGCCGGCTGCCTCCTCTGAGGAGACCCACTCGGGCGCAGACGAGTCCGAGGACGAAGAGACCATCGCCTTC
TCTCGTACCCCTGCCCCCAAGAACCCGCCTCCGCCGCCGCAGAAGGGCGAGGAGTCGGAGACCTCTGACGAGGAGGAGGA
GGAGGAGCCATCCCACGCGGCCCCGAACACTGCCCCCAAGAAGCAGCCTCCGCCGGCGCGACAGAGCGAGGACTCCGACA
GTTCCGACGAGGAGGAGGATGGGGGTTCCGAATCTGACAAAGATGCGCCGCCGCCGAAGCCATCTCCGAAGCAGGAGGCC
AAGGCCCCGGATGCCAAGAAGCCGCGCCTGGCTTTCCACCGCGTCTGGTCCACCAACGACGAGGTCCGTATCCTTGAGGC
CCTCGCCGCTCACCAAAAGGAGCACGGCGTGCTGCCGCAGCCCGACGCACTGGTCGAAGCCCTCGCCGGAAAGCTCGACA
ACCGTGCCTACAGCAGCAAGGAGCTCCAGGGGAAGGTCAAAAGCCTCAAGCATCGGTATGTGTCAGCCGCCAAGAAGTAC
GAGCTCCCGACCAAAGAACACGACCGCCGGCGCTTCGACCTCTGCAAGATCGTCTGGAGCGGCCACAAGTACAGGGGCCG
CGCTGCCACCGCTTCTACTGCTGCTGCTGCCACTGCCAAGGCGAACAACCACGAGCCCAAGGGATTTGAGGAGATGTGTG
AGTTGTACCCGTACCTTGCAGAGGAGGTGAAGAAGA------------------GCATGTTCAAGCGGGAGTTCGGAAAG
ATGGACGACGACAAGGCACGCTTGCTGGACGAGAAGATCAAGAAGCAGAGGGTACAGCAGATGAAGGTGGAGCTACGCCG
CAGCGACCTTGGCAGGGAGGTGACCAAGGCAATAATGGACCTGATCGACTGAT-------GGATGAGCTTACCTGAAACT
GTATCGATGATCACCCGAAATCGGTGACAACGCGAGCATCCTAGAATTGGCAAATTGCGTCTTG--TTGATGGTAAGAAT
GTTTTTGCGGCAAGAGAGCGTGATCGCTGGTTCGATCAAATAGTGTTAGGTTAAGAGATGCTAGCTGAATGGGTTAGTTC
AGTAAAGATGTTCTGCTGTTATTAGTTTTCATAGCTCGTTCATACAGGTTGTTCTTGGTCTTTTGAGTGTTTCAGATTCC
AGGTGCGGATTAGATTTCGCTTTTGAGTAATTCAAAGGTATAGACTGGAGTCGTAAGTCT-GAATTTGATGACTGTTATG
GATCACCGGATTGTGTTTTGCATTGTGGTGGATTACTGCTCTCCTTGCTAATCTGCTAGTAGTTTTTTGTTCGTTCATGA
ATGGATCCCCATGTTCTGATATCGATGACTGTTAAGTTTCTCAGGCTTTATTTTGCATTGCAGTGGATTTTGCTGACCTT
GCCTGTTTGCGTTGTTTTT-------------------------------------------------------------
-----------------CTTGTCTATTTTTCCGTATTTTAACAAGAAGAGC-CTATTTCAGCTATATGGCTTAGTCGTGC
CTTGTTTGTGCTGGAGCTCACCAACTCCTGATCAGTGGCCACCGCGGTACTGAATCCTGCAAACCAAGGAGGCCCTACAT
GAATCCTTCGCCCGCAATTTGGTGAATTTTGTGCTCTCCTCTGTCTTTCCGTCACCCTTTCTATTCTCAGCTCTCACGAT
TGAATCAGACACAAGTGAATTAGGCATAGAATACTTGCAGGCCATGGACCTGGTGCTTTCCCATTGCTTTAATCTCTCTT
CTCAAGTGCATCAAACTACGGAAAGAAGATGAACATCTTCAAGTTTTTCCCAGCCCTATCTCAAGCTGCTATGGTGCGAA
TGCAACACCACTCCTCCGATTGTGCGCGAATCTTGGTGCGAGGACATAATCGTTTGCTCCGATTCTATTTTTTCCGTGAC
ATAGCATCCTCCCAGCATTGCTGCTCT-ATCTGCCCCCAATCCCATTTTTTCAGATAGCAACTTTCTGTGTTTTTGTCCA
TTTAAATCCTGAACAA-------------------------------------------------
>chr7B_819
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------------------AAACTGCAAAGGAGAAAAATGTTATTTCAACATTTTTGGGTTGGGCTGGATATAATACTGAC
ACGAAAATGCATTGATATTACAGATGGGCCGGCTGAAACCAAAAGAAAGAGGAAGCCCACCTGGGCCTTATAAGCC-GAC
TG-TGGCTTGATGAAAGGAGACCCGAC--------ACCCGAAGAAGGGAAACCCCACCTTTGT---CCGGCGCCGCCACC
CACCTCTTCTCCCAAACGCTCAACCC-TACTTCTCCGACCATGGCCAAGAAGCGCGGCGAGAAGAGGC---CACCGCCGC
CGCCGCCGCCGGCGGCTGCCTCCTCTGACGAGACGCACTCGGGCGCAGACGAGTCCGAGGACGAAGAGACCATCGCCTTG
TCTCGTGCCCCTGCCCGCAAGAACCCGCCTCCGCCGCCGCAGAAGAACGAGGAGTCCGAGACCTCTGAAGAGGAGGAGGA
GG---AGCCATCCCACGCGGCCCCGAACACTGCCCCCAAGAAGCAGCCTCCGCCGGCGCGACAGAGTGAGGACTCCGACA
GTTCCGACGAGGAGGAGGATGGGGGTTCCGAATCTGACAAAGATGAGCCGCCGCCGAAGCCATCTCCGAAGCAGGAGGCG
AAGGCCCCGGAGGCCAAGAAGCCGCGCCTTGCTTTCCACCGCGTCTGGTCCACCAACGACGAGGTCCGTATCCTCGAGGC
CCTCGCCGCTCACCAAAAAGAGCACGGCGTGCTGCCGCAGCCCGACGCACTGGTCGAAGCCCTCGCCGGAAAGCTCGACA
ACCGTGCCTACAGCAGCAAGGAGCTCCAGGGGAAGGTCAAAAGCCTCAAGCATCGGTATGTGTCAGCCGCCAAGAAGTAC
GAGCTCCCGACCAAAGAACACGACCGCCGGCTCTTCGACCTGTCCAAGATCCTCTGGAGCGGCCACAAGTACAGGTCCCG
CGCTGCCACCGCTTCTACTGCTGCTCCCACC---GCCAAGGCGAACGACCACGAGCCCAAGGGATTTGAGGAGATGTGTG
AGTTGTACCCATACCTCGCGGAGGAGGTGAAGAAGATGGAGGCCT------CGGGCATGTTCAAGCGGGAGTTCGGAAAG
ATGGACGACAACAAGGCACGCTTGCTGGACGAGAAGATCAAGAAGCAGAGGGTACAACAGATGAAGGTGGAGCTGCGCCG
CAGCGACCTTGCCAGGGAGGTGACCAAGGCGATAATGGACCTGATCGACTGATGGGAGTGAGATGAGCTTACCTGAAACT
GTATTGATGACCTGC---AATCGATTACAATGCGAGCATCCTAGAATCGGCAAATTGTGGCCTGTTTTGATGGTAAGAAT
GTTTTCGCGGCAAGGGAGCATGATCACTGATTCCATTGAATAGTGTGCGGTTAAGAGATGCTAGCTTAATGCGTTAGTTC
AGTAAAGATGTTCTGCTCTTATTAGTTTTCAAAGCTCGTTTGTACATGATGTTCTTGGTCTTTTGAGTGCTTCAGATTTC
GGGAGTGGATTTGATG-CGCTTTTGAGCATTTCAGAGATGCAGACTGGAATCGTGAGTCAGGAATCGAATGACTGTTATG
AATCACTGGGTTTTGTTTTGCATTGTGGTGGGTTACTGCTGTTCTTGTTGATCTGCTAG----TTTTTGTTTGTTCATTA
ACGCATCCCTATTTTCT---------------------------------------------------------------
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>chr6D_1432
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-------------CCAAGAAGCCGGCC---GCTTTCAGCCGCATCTGGTCCACCGACGACGAGGTGCGTATCCTCGAGGC
CCTCGCGGCTCACCAAAAGCAGCACGGCACGCTGCCGCAGCCCGACGCCCTCGTCGACGCCCTTGCAGGAAAGCTCGACA
ACCGTGCCTACGGCAGCAAGGAGCTCCAGGGGAAGGTCGCAGCCCTGAGGCGTCGGTACCTCCTTCTCAGCAAGAAGGGC
GAGCTCCCGAGCAAGGAGCATGACCGCCGGGTGCTGGAACTTTCCAAGATGGTCTGGGAAGGTGGCG---ACATGGCCAG
CGCCGCAACTGCCTCTGCGAAGGTGGCA---------------AATGGCCAGGAGCCAAAGGGGTTCGAGGAGATGTGTG
AGATGTATCCGTACCTGGCGGAGCAGGTGAGGCAGCTGGATGCGGCGAACCCGGGCATGTTCAAGAGGCAGTTCGGGATG
ATGGATGAGGAGAAGGCGCGCGCCATGGACGAGAAGATCAAGAAGCAGAGGGTGGCGCAGATGAAGGTGGAGCTGCGCCG
CCACGACCTGGTAAGGGAGGTGACCAAGGCCATCATCGATCTGGTCGACTGATGGGAGCGTCATGAGCTTACCTGAAATT
GTACCGGTGATCAC------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS---S---------------------------------------------S-SSS--SSSSS-
S-SSSSS-SS--S-S-SS------------S----------------------------S--------------------
--S----S-------------------------------------------------------SSS---S----------
-----------------------S--S----------------------------------------SSSS----S--S-
-----------------------------------------------------------------------------S--
-----------------------------S----S---------------------------------------------
--------------S-----------------------------------------------------------------
----------S--------------------------------------------------------------S--S---
---------------------------------------------------------------------------S----
------------------------------------------------S-------------------------------
-----------------------------------------------------------------------------S--
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S-------------------------------------------------------------------------------
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--------------------------------------------------------------------------S-----
-----------------------------------------------------------------------S--------
---------------------S----------S-----------------S--------S-S------------------
------------------S---------------S---------------------------------------------
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--------------------------S------------------S------S-------------S-------------
---------------------------------------------S----------------------------------
------------------------------------S-------------------------------------------
-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS--------------S-------------------S-----------------S----------
----------------S-------------------------------S-------------------------------
--------------------------------------SS----------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------S----------------S----S-
----------------------------------------------------------SS--------------------
--------S---------S-S------S----S-----S-----------------------------------------
------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_725
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-----------------------------------------------------------------TGTGGTGCTTCCTGC
CTAAG---------------------------------------------------------------------------
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>reverse_2102
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---------------------TGGTGACAACGTGAGCATCC---------------------------------------
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>forward_816
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----------------------------------------------------------------------------TGTA
AAGGAGAAACCCCGCC----------------------------------------------------------------
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>reverse_2840
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---------------------------------------CCTGTCTTTCCGTCACCCTT---------------------
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