>input_sequence_57314
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-----------------------------------------------ATGGCGCTGCGATCGCTTATTCGAAAGATGCCG
GCCGTTGGTCTCAGATCGACGCCGATGCCCCCCCGTATGGGGCCCGTCCACGCGCTCTCGACGGCGGCTGGTTCTCGGAT
TATGTCCGATGGTGCTCCCGTAAGTAAACTACCTCACTGGTTTTTCTTATTTGATTTGATTTGTTGCAAACCAACTTAGA
TCTGATCCCCTTTGTTTTTTCCGTTTCACCCAATTTAAAACAACAAATCAAGGAAATATGTTCGATAAGAATTATTCGTT
ATTGAAGTCGCTAGGTACTTACTCCACCTTTTTGGAATTTGTTGGATCTTCATCCTGAGCGTAACAGATTACTGGCATGC
ATTATCTTTTCACTTTAGATCTAGCATTTTTTTTCTAATGTTTGCACATGCGCCTTCTTTCGAATTTAGGGAATAAATGG
CCGAGCGAAGATTTATTCCGAAGATGAGATAGCTGAACGACGGGAGGCAATAAAACGCCTGCACGCGGAGATCGAGAAGG
ACCGTGCGGTGTCTGAAAGGTATCTAGCTGAGCACAGGAATGTAATGGAGATGCTGGAACAACAGAGTGCTGCAGGAGAA
GCTGCCTATAATGCAGCTATGAGGTACATCGTTTGAAACAAAGTCTTACCATATCACATACTCTTTTCATTGCCAAGTTT
TATTCTCAACTGTATAAGGTGTCATATCGCAAAGTGGTATATAGAGTTGATCCAGTATGAATAAGCTCCACTTTTTATAT
TTATGAAATGGTTTGTTGATACCGAATCACTTATTCAAATAAATATCCTATTAGTTCATCACCTCATGGGTCTTACCAGA
ATTGCAGTTTCACCGGACACAGAAAAATGTATGTTCTCGTGTTAGGTCTTCCAAGCCGTTATTGAAACTTTAAGCTGTTT
TGTCTCATATTGGCAACCCAGATATATTCACTTGCCTCATGGGGATCTTATTTGAGAATACAGTATGATTGTATGCTATC
CGGTACCTAGCTTTATTTTTACATGGTATTTCTATTCTTATTTAAATTTAAAAAGAAAATCTATTTATTCAGGCTTGTCT
AATATGGGTGCTCTTAAATGTGTAGGGATATTAGTGAAGCCCGTGTAAGTTGTATGAAAACACTGAAGAACGTGGCTACG
GCATGCGATGTTGTTGCGGTTGCCTGCCCTATGCTGATTGTCCTTATGATGATCACTACATAG-----------------
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>chr6B_1_TraesCS6B01G184200
TCCGCTAGTTCTGCTTACGCGGCGGGAT-CATGGGGTTACAGACAGATCCTACGGCGGATTTCACCTGGGGCTCCAAGGC
CCCTCTTTGATGTCAGTTCTTTGCGTGGCTGGCCTTTCGGAATCGCTGCCGGACCTCCGATCGCTTGGCCAGACGTGGTC
TACCGCATCAGGATTCGTGCCCTCTTTGCGGCCAATGTGAGGAATCGATCCAACGCCTGATGATTGGTTGTGTATTTGCG
AGACAGATTTGGCATTGGGTGGGCCAGATCACTCGCAGGGCGGAGTTTGAGCCTCTCGGTGACGAGGACATCTACGCATG
GAGT--GAGGTAGAATGTGCATGACCAGGATCGAAAAGCCACGAGGGCCAAATGCCTCCTCACTATGTGGATGATTTGGA
AGCATAGGAATGACGTCGTGTTCAACGGCGTGTCCCCCTTGGTGGCTCTGACGATGAGTCGGATCAAGGAAGAGGGACGG
CTGTGGGCCATGGCGGGCATGATGAAACGTAATGCTTGGGGTTTTGAGGTAGAGAGAGTAGCGTGGGAAGATGTAACATA
ATACACTAGTCTGTG--TGGGTGGTGCCAGCTTTGGCCGGCATGTAAATAAGCTTGTAAAACTTTGGGAAGTCTT-CCCC
CTCCTCTTTAATGGATGATATGCCT-CTCGTGCATATTCGAGAAATTTTTTCTCCCATAGAAGGAGTACATGTGATATTT
TTTTCCACAGTATATTGGAACTAGAGTTTGGGCCTTGTATGGGCCAGCACCACAAGATTTTTGGTTTGAGGGAAGCCAGC
GCTACAAGTTTTGTGTTGGTGGTGGAGTCGGAAACCGGCCGAAGCTTGTAGTTGGCCCGTCGCCTCCTTGCCACAGATAT
CGTGCACGGTCTGAACGAGGCAAGCAGCATAGAAAGCGAAACAAGGCCAGTCGAACCCTAGATTCCGCCGCCGCCGCCAC
CGCCGCCACCGCCGCCGCCACCAATAAGCCCGAGCGTGTATAACGTGATGGCGCTGCGATCGCTTATTCGAAAGATGCCG
GCCGTTGGTCTCAGATCGACGCCGATGCCCCCCCGTATGGGGCCCGTCCACGCGCTCTCGACGGCGGCTGGTTCTCGGAT
TATGTCCGATGGTGCTCCCGTAAGTAAACTACCTCACTGGTTTTTCTTATTTGATTTGATTTGTTGCAAACCAACTTAGA
TCTGATCCCCTTTGTTTTTTCCGTTTCACCCAATTTAAAACAACAAATCAAGGAAATATGTTCGATAAGAATTATTCGTT
ATTGAAGTCGCTAGGTACTTACTCCACCTTTTTGGAATTTGTTGGATCTTCATCCTGAGCGTAACAGATTACTGGCATGC
ATTATCTTTTCACTTTAGATCTAGCATTTTTTTTCTAATGTTTGCACATGCGCCTTCTTTCGAATTTAGGGAATAAATGG
CCGAGCGAAGATTTATTCCGAAGATGAGATAGCTGAACGACGGGAGGCAATAAAACGCCTGCACGCGGAGATCGAGAAGG
ACCGTGCGGTGTCTGAAAGGTATCTAGCTGAGCACAGGAATGTAATGGAGATGCTGGAACAACAGAGTGCTGCAGGAGAA
GCTGCCTATAATGCAGCTATGAGGTACATCGTTTGAAACAAAGTCTTACCATATCACATACTCTTTTCATTGCCAAGTTT
TATTCTCAACTGTATAAGGTGTCATATCGCAAAGTGGTATATAGAGTTGATCCAGTATGAATAAGCTCCACTTTTTATAT
TTATGAAATGGTTTGTTGATACCGAATCACTTATTCAAATAAATATCCTATTAGTTCATCACCTCATGGGTCTTACCAGA
ATTGCAGTTTCACCGGACACAGAAAAATGTATGTTCTCGTGTTAGGTCTTCCAAGCCGTTATTGAAACTTTAAGCTGTTT
TGTCTCATATTGGCAACCCAGATATATTCACTTGCCTCATGGGGATCTTATTTGAGAATACAGTATGATTGTATGCTATC
CGGTACCTAGCTTTATTTTTACATGGTATTTCTATTCTTATTTAAATTTAAAAAGAAAATCTATTTATTCAGGCTTGTCT
AATATGGGTGCTCTTAAATGTGTAGGGATATTAGTGAAGCCCGTGTAAGTTGTATGAAAACACTGAAGAACGTGGCTACG
GCATGCGATGTTGTTGCGGTTGCCTGCCCTATGCTGATTGTCCTTATGATGATCACTACATAGTAACTTACTGTATGTTT
GTTCGGTGCTATCATCGAACTACCTCCCTTCTTATTTATTAGGCCTGCATGTATACCTAGATTAATATCCCAAATGATAG
GGATTTGCTCTTCTAGAATGCATATATGTCAGAGTGTTGAATGCAGTAAAGTATAATGGTCTACAACATATTTTTCTTTT
TCTTAAATCCAAATAAGAAATGCACCAAAATCCAGTCTTACAGCAAATCCAAAAAAAAGTCAGAATTTTGGGACAGAGGG
AGTACTTTTTAGGTGGTATATGCACTATTCTTTTTAATATAAAATAAAAATATACAAAAATTATGCTCGCTTGCGATTTT
TTTAGTTTATCTTTGAAATATTTTAGATATGAACATATTTAGAATGATAAAATAGTATATATACTAGTGGATATTCGTTT
TGGAGCCCAGGCTCAGATGCACCTGAAATCTTTTCCGTCGGTACATCATTTAGATCTGTGCCTGGGTGTGTATTCATCTA
TGTATTGGAGAAGTATGGTTAGTAGTAAAATAACCCAGCGCCGCAGTGCATTGAATGCGTAGGT-----------CATGA
TGGAACAGAAATCCTTT-AACGGCTCAGTTGTTTTTCTGTGCTATGCCAGGCCGTCTCTGTTGATGAACGGCTATAGTAA
AGCGGGTGGCATCCGCCAGCCAGCGCCACACATGCTGCCTTTACTCTGTTCGCAGTCTCAAATTTTGAAACCCATGGCGC
ACACACTACCGCCCCAACAAGCTGCACACCACGGGGACACTCATAACAAAGGGACAT---------GTTGTCACCACATA
ACCAAATTCACAAAACCATATCAGGCATGCCGATTCAAAAACACTACCGAACATACAGAATTTAAAAAGTTTCATAAAAT
TTATTGATCTACAAC------------------------------------------AATTTACAACCATATCATTAACA
GAGAATGACCTTGCATAAGTACATATATCATTTCTTCCCAAAA-TAACATGTCTCCATGACTCCACTGTCAATATCTGTG
TCAAAGA
>chr1D_1
TCCGCCAGCTCTGCTTACGCGGCGGGATTCATGGGTCTACAGATAGATCCTACGGCGGATTTCACCTGGGGCTCCAAGGC
CCCTCTGCAATGTCGGTTCTTTGCGTGGCTAGCCTTTCAGAATCGCTGTTGGACCTCTGATCGCTTGGCAAGACGTGGAC
TGCCACATCAGGATTCGTGCCCTCTATGCGGCCAATGTGAGGAGTCGATCCAACACCTGATGATTGGCTGTGTATTTGCG
AGACAGATTTGGCATTGGATGGGCCAGATCACTGGTAGAGCGGAGTTCGAACCTCTCGGTGATGAGGACATCTACGCATG
GAGTGAGAGGCAGAATATGCATGCCCAGGATCGGAAAGCCACGAGGGCCAAATGTCTCCTCACCATGTGGATGATTTGGA
GACATAGGAATGACGTCGTGTTCAACGGCGTGTCCCCCTCGGTGGCTCTGACGATGAGTCGGATCAAGGAGGAGGGACGG
CTGTGGGCCATGGCCGGCATGATGAAGCGTAACGCTAGGGGTTTTGAGGTAGAGAGAGTAGGGTGGGAGGATGTAACGTA
GTATGCTTGTCGGTC--TGGGTGGTGCCAGCTTTGGCCGGCATGTAAATAAGCTTGTAAATCTTTGGGAAGTCTTCCCCC
CTCTTCTTTAATGGATGATATGCACTTTTGTGCATATTCGAGAAA-----------------------------------
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>chr3B_4
---GCTAGTTCGGCTTACGCGGCGGGATTCATGGGGCTACAGACAGATCCTACAGCAGATTTCACCTAGGGCTCCAAGGC
CCCTCTGCGATGTCGCTTCTTTGCATGGTTGGCCTTCAGGGATCATTGTTGGACCTCTGATCACTTGGCCAGACGTGGAC
TGCCACACCAAGATGCATGCCCTGTTTGCAGCCAATGTGAGGAACCGATCCAACACTTGTTGATTGGTTGTGTATTTGCT
AGACAGATTTGGCATTGGTTGGTCCAGATCACTGGCAGAGCAAAGTTTGAGTCGCAGGGAGACGAGGACATCTACAGGTG
GAGTGAGAGGCAGAACGTGGATGCCCAGGATCGAAAAGCCACGAGGGCCAAATGTCTCCTCGCGATGTGGATGATCTGGA
AACATAGAAATGATGTAGTGTTTAACGGCGTGTCCCCCTCGGTGGCTCTAACGATGCGTCGGATCAAGGACGAGGGACGA
CAATGGTCCAAGGCCAGCCTAATGAAGTGTAACGCTAGAGGGTTCGAGGTAGAGATAGTAGGGTGGGACGATGTAACGTA
GAACACCTCTTTTGTATTGGGTGGTGCCAGCTATGGCCAGTATGTAAATAGGGTTGTAAAACTTTGGGAAGTCTTTACCC
CTCT-CTTTAATGAATGATACGCACACTCATGCGTATTCGAGAAA-----------------------------------
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>chr6D_2622
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--------------------------------------------------------------------GGATATTCGTTT
CGGAGCCCAGGCTCAGATGCTCCTGAAATCTTTTCCGTTAGTTCAGCATGTGGATCTGTGCCTGGCTGTGTATTTATCTA
TGTATTGGAGAAGTATAGCC---AGTAAAATAACCCAGCGCGACAGTGCATTGAATGTGTACACAGCCGTTATGGCATCG
TGGAACAGAAATCCTTCCAACGGCTCGGTTGTTTTTCTGTGCTATGCCGAGCCGTCTCCGTTGATGAACGG---------
-----GTGAGATCCGCCAGCCAGCGCCACATGTGCTGCATTTAATCTGTTCGTAATTTCAAATTTTGAAATCCATGGCGC
AC----------CCCAACAAGCTGCACACCACGGGTACACTCATAACAAAGGGACACGTGTTGTCAGTTATCACCACATA
ACCAAATTCAGAAAACCTTATCAAGCATGCCGATTCAAAAACACTACCAAACGTACATAATTCAAGAAGTTCCATAAAAT
TTATTGATCAACAACAACAGTCTACTCAACATTCTAAAATTAGAAATCACATACAGTAATTTACAACCATATCATTAACA
GAGGG---------------ACATATATCATTTCTTCCCAAAAATAACATGTCTCCATGACTCCACTGTCAATATCTGTG
TCAAAGA
>chr5B_2624
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----------------------------------------------------------------------ATATTTGTTT
CGCAGCCCAGGCTCAGATGCTCCTGAAATCTTTCCCGTTAGTTATGCATGTGGATCTGTGCCTGTCTGTGTATTTATCTA
TGTATTGAAGAAGTATTTCC---AGTAAAATAACCCAGCACGGCAGTGCATTGAATGCGTACACAGCCGTTATGGCATGG
TGGAACAGAAATCTTTCCAGCGGCTCGGTTGTTTTTCTATGCTATGCCGAGCTGTCTCCGTTGATGAACGG---------
-----GTGTGATCCGCCAGCCAGCGCCACATATGCTGCATTTAATCTGTTTGCAG-------TTTCAAAATCCATGGCGC
AC----------CCCAACAAGCTGCACACCACGGGTACACTCATAACAAAGGGACACGTGTTGTCA-------CCACATA
ACTAAATTCAGAAAGCCTTATCAAGCATGCCGATTCAAAAACACTACCAAACGTACATAATTCAAGAAGTTTCATAAAAT
ATACTGATCTGCAACAACAGTCTACTCAACATT-TAAAAGTATAAATCACATATAGTAATTTACAACCATATCATTAACC
GAGGG---------------ACATATATCATTTCTTCCCAAAA-TAACATGTCTCCATGACTCCAATATCAATATCTGTG
TCAAAGA
>SNPs
------------------------------------S-------------------------------------------
------SS------S---------------------------------SS-------S--------------------S-
-S--S-------------------------------------------------S-------------------------
------------------S--------------S----S-----------------------------------------
----------S------------S------------------------------S--------S----------------
-S-------------------------------------S------------------------------S---------
--------------S-----------S-----S---S------------------------S------S--------S--
S------S------S-----------------------------------------------------------------
---S-------------------SS--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------
S-------------------S-----------------SS--S--S---S-S-------------S--------S-----
----------------S-SSSSS------------------S-------------------SSS---------------S
----------------S---------S---------------------SS--------S------------SSSSSSSSS
SSSSS---SS--------------------S-------S----S------------S-------------S---------
--SSSSSSSSSS-----------------------S--------------------S------------S----------
----------S------S-----S------------------------S---S----S----S--S--------------
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---SSSSSSSSSSSSSSSSS------------------------------------------------------------
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>forward_943
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-------------------------------------------AGGCCAGTCGAACCCTAGAT-----------------
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>reverse_2142
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-------------------------------------------------------------ACTGAAGAACGTGGCTACG
G-------------------------------------------------------------------------------
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>forward_1487
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---------------------------GATAGCTGAACGACGGGAGG---------------------------------
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>reverse_2875
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--------------------------------------------------------------------------TAGTAA
AGCGGGTGGCATCC------------------------------------------------------------------
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