>input_sequence_57303
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-----------------------------------------------CTGATATGGTGCTACGACGTCATGACGGTTCCC
CAAGCCTAGCTAGAGTTTCTCCCGTCCCCAGCCCGTGCCGGACCGGCGGATTCCCTCCCTCCGGCCCGGCGCGCGGCTAT
ATATACCACCGCA-AGCAGCGTCCATTGCTC----CTCACCAAGCAAGAGCAAAACCAATCAACCACAGGTCGATCGATT
CGCGAAGTACCCTCCGATCACAACCCAAGACCGCCATGGCTGACAAGTGCGGCAACTGCGACTGCGCCGACAAGACCCAG
TGCGTGTAAGTACAGTACCTACCACACAGCTAGATCGAGCTAAT------------------------------------
--CCGTCTCTTCCACGTGCATCG-------------------------------TCTGTATAGTCCGATC-TTCGTATCG
ATCTTTG------CTCTACCCTGTCTGAAT----ACATGTTCCTGTGGTGGTTCTGTCATCTCATGTGTGCAGGAAGAAG
GGCGACGGCTACGGCATCGTCATGGTCGACACCGAGAAGAGGTACTGCGCACTAGTAGTAGTATTTCACTTCGCTGATCC
GTTCCGGTTTACCTTAAACTATACTATGTAGAAAGTAGAAACTAATCGGTTGAAACTGCCCACACACGCACACACACACA
AAGTAAATTTATGACATGGTCACACAAAGCTTAGCTTGCTGAGAGATTAGCCAAAATTAAATCCAGTTGCAAGATCTACT
CCATGGAAGGACTTCATCCAGGACGATCTTGATATAGCCTCCGGAACTAAATAAAAATTGATTTGACTAGAGATCTCTAT
CGAAGACCTAACGTTGGCC--------CATGCATGTGCAGCCACTTCGAGGTGCAGGAGGCCGCGGAGAACGACGGCAAG
TGCAAGTGCGGCGCCAGCTGCACCTGCACCAACTGCACCTGCGGCCACTGAACAGGCCCGCCCCGCTGGGCCTCTCGGTC
ATCGCGTACGCCTCTACCCGTACTAGTAACCCGTGTCAATAAAGGTCGATC--TGTACGTGTGTGTCTACGTATGTTGTG
TTGTCGTCGTGCAAGAACCTGAAGGTTG-GC---TGATGCGTGCATAGGATAGGATCTTGGATCAGCCGATCGGTCCCGT
GTTCCTCCCCTGTAACCAGTGGCTGAGCTTCAGGTACTACTACTATGTGGTTGTGAGCTCGTACGTGTTGTGGCATGTGA
CTTC-ATTTCGCGTATGCGTGTTGCACGGAATGAAATTTGTCGTGTGGTTAACTAGT-ACTTCCTCCGTGAAGAAATATG
AACG----------------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G313200
TATTGTTTATGGCTGGGATCTGGTTAAGAAGGGTATTATATGAAGAGTGGGGGACGGTGCTGTGATTAAAGCATGGCGCG
ATCCATGGATTCCACGTGGCCATGATTACCGGTCGGTTACGCCTAAGCGAAACTGTAGGTTTAATCGTGTTTCTGACGTT
CTTGATACTAATGGTGCATGGAATATGGAGCTGACTTGAGGAGCATTTTTGGCCTATGGACGTACATTATATTTTGAAAA
TTCGGACTTCACCTAGGAATCGTCATGATTTCCTTGTCTGGG--CCCTTGAAAAGAATGGGAGATTTAGTGTGAAGAGTG
CTTACCGGCTGGCTACACATGAACACGAGGATAATCTTGCAGGTGGTGCTTCCAGTACCTGCCCTGGTGGTGAGCGTTCT
CTATGGTCTTGTATCTGGCGAGCGAAAGTTCCGCTCAAGATGCGG-TCACTGCCTGGAAGGTTGCGGCTAGGGCCTTAGC
AACAAATGAATGCAAAGTGACTAGACATCTCTCAGATCGTGGAACATGTCCTGTGTGTGGCCTTGAAGTGGAGAGCTCCT
TTCATGCTTTAATTACACGTGGCCATGCAAGGGCCC-TTTGGGAGGCCATGCATGAGTTCTGACCGCTACCGGCGACGGA
CCAATTGATAGACAATGGCAAGGAGTGGCTGTTACATGTTTTATCTGGATGTTCTGATCAAGTTCGTGATATGGTTATTT
TGCTTATTTGACGTATTTGGAGTCTCAGGTCAGATATAGCACATTGCAAGGTAGTTTCTCCATTGGAAATAAGTGTTGAT
TTCTTGATCAGTTATCTAAAGTTTCTAGATCTTGCTTGGA-ATATAGCACTGAAGAGATTTTAAAAGATAAAATGACCCT
GTTGGAGGTCCGGACTCCAGAACCTATGGGTAGCGGGCA--GTGTGTGCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGC
GCTTTCGGTAGATGGTTCTTTTTCTGTTCATAATGACTCCGCAGCGACTGATATGGTGCTACGACGTCATGACGGTTCCC
CAAGCCTAGCTAGAGTTTCTCCCGTCCCCAGCCCGTGCCGGACCGGCGGATTCCCTCCCTCCGGCCCGGCGCGCGGCTAT
ATATACCACCGCA-AGCAGCGTCCATTGCTC----CTCACCAAGCAAGAGCAAAACCAATCAACCACAGGTCGATCGATT
CGCGAAGTACCCTCCGATCACAACCCAAGACCGCCATGGCTGACAAGTGCGGCAACTGCGACTGCGCCGACAAGACCCAG
TGCGTGTAAGTACAGTACCTACCACACAGCTAGATCGAGCTAAT------------------------------------
--CCGTCTCTTCCACGTGCATCG-------------------------------TCTGTATAGTCCGATC-TTCGTATCG
ATCTTTG------CTCTACCCTGTCTGAAT----ACATGTTCCTGTGGTGGTTCTGTCATCTCATGTGTGCAGGAAGAAG
GGCGACGGCTACGGCATCGTCATGGTCGACACCGAGAAGAGGTACTGCGCACTAGTAGTAGTATTTCACTTCGCTGATCC
GTTCCGGTTTACCTTAAACTATACTATGTAGAAAGTAGAAACTAATCGGTTGAAACTGCCCACACACGCACACACACACA
AAGTAAATTTATGACATGGTCACACAAAGCTTAGCTTGCTGAGAGATTAGCCAAAATTAAATCCAGTTGCAAGATCTACT
CCATGGAAGGACTTCATCCAGGACGATCTTGATATAGCCTCCGGAACTAAATAAAAATTGATTTGACTAGAGATCTCTAT
CGAAGACCTAACGTTGGCC--------CATGCATGTGCAGCCACTTCGAGGTGCAGGAGGCCGCGGAGAACGACGGCAAG
TGCAAGTGCGGCGCCAGCTGCACCTGCACCAACTGCACCTGCGGCCACTGAACAGGCCCGCCCCGCTGGGCCTCTCGGTC
ATCGCGTACGCCTCTACCCGTACTAGTAACCCGTGTCAATAAAGGTCGATC--TGTACGTGTGTGTCTACGTATGTTGTG
TTGTCGTCGTGCAAGAACCTGAAGGTTG-GC---TGATGCGTGCATAGGATAGGATCTTGGATCAGCCGATCGGTCCCGT
GTTCCTCCCCTGTAACCAGTGGCTGAGCTTCAGGTACTACTACTATGTGGTTGTGAGCTCGTACGTGTTGTGGCATGTGA
CTTC-ATTTCGCGTATGCGTGTTGCACGGAATGAAATTTGTCGTGTGGTTAACTAGT-ACTTCCTCCGTGAAGAAATATG
AACGCTTTTATATTTCTGTATAAGAATGTTTAAATCACTACTTTAGTGATCTAAACACTCTTATATTTTTTTTCGGAGGG
AGTAGCTAGTAAAACATATCTCCTGGTTGCTTCTCTATCAAGCATCTATGCATGCCTGTTTGCAAATGGGGGCGGCAATT
AAGCAACATAGAGTGGTTTCCGGGTTTTTATCTTGATATATAAACATTTCATTCCCGGAACCCGCAGAAAACTTGCCCCG
GCTTTAGTAACGAAACTTAGCAGGTTCTTTACACTACCACATACACAGAGTGCATACCAGATATAGGGGGCTAAGCGCCG
CAGAGAGGAAACAAAACAAATCAAAAAAAAAAAGTTGGGCTGTGCTAATACCTAAAGTCCACAACATCCATTGTTGTCTA
GTGAAATCCGAATCGAGATATGCACCCACCACCTGAGGGTTGGCATACCTATAAATATCTAATCACCTTATGCACCTTGT
GCTTCTCTTTTTTTTTATAACTGGGGGATGAGGTTAAGACTCATTGTATTTTCTATGGTCTTCAGGTGACGTTTGAGTCA
ATAAATATCCTTCATTGAAAAAGTCATAATGGTCTACTATTCCTCCGGTGTGTCTTGGGCGAATTGTGACCTACGGCCCT
ATCCCGCTTGTCGTTGTTTATGATGGTATATTTTTTTGGATGGATTTTAGGCATCAACATGTCATCTTTCAATATGTTCT
TTTATATCAAAGAACCTCAAGAAACAAACATTTGGTACAAGGCATCCCCTATAAACATCTATTTACTTGACAGTTTTAAT
TGCACGTTGTGCCCAACAAAAGTTTTGGTAAACTTGCTATGCCTGGGGTAGGCTGAATGTTGTCTTTCCCGGGTTTTTTT
CTTAGATACCGATCCAATTGTTTTTCATGAAACTTTCCAGGAACTTTATGAAAAGAATATTACTTTTTCAGGTGTCCCCC
ATGAAACTTTTTTGTCGGAGACACCTCAAAACTTTTTTAGCCCA
>chr3D_1
TATTGTTTATGGCCTGGATCTGGTTAAGAAGGGTATTATATGGAGAGTGGGTGACGGTGCTGCGGTTAAAGCATGGCGTG
ATCCATGGATTCCGCGTGGCCATGATTACCTGCCGGTTACGCCTAAGAGATACTCTAGGTTTAATCGTGTTTTTGATTTT
CTTGATAATAATGGTGCATGGAATATGGAGC-GACTTGAGGAGCATTTTTGGCCTATGGACGTACATCATATTTTGAAAA
TTCGGACTTCACCTAGGAATCGTCATGATTTCCTTGCCTGGG-CCC--TGAAAAGAATGGGAGATTTAGTGTGAAGAGTG
CTTACCGGCTGGCTACACATGAACACGAGGATAATTTTGCAGGTGGTGCTTCCAGTACCTGCCCGGGTGGTGAGCATTCT
CTATGGTCATGTATCTGGCGAGCGAAAGTTCCGCTCAAGATGCGGGTCACTGCCTGGAAGGTTACGGCTGGGGCCTTAGC
AACAAATGAATGCAAAGTGACTAGACATCTCTCAAATCGTGGAACATGTCCTGTGTGTGGCCTTGAGGTGGAGAGTTCCT
TCCATGCTTTAATTACATGCGGCCATGCAAGGGCCC-TTTGGGAGGCCATGCGTGAGTTCTGGCCGCTACCGGCGACGGA
CCAACTGATAGACAATGGCGAGGAGTGGCTGTTACATGTTTTATCTGGATGTTCTGATCAAGTTCGTGACATGGTTATTT
TGCTTATTTGACGTATTTGGAGTCTCAGGTCAGATATAGCACATGGCAAGGTAGTTCCTCCGTTGGAAATAAGTGTTGAT
TTCTTGGTCAGTTATCTAAAGTCCTTAGATCTTGCTCGGAGATATAGCAGTGAAGAGATTATCAAAGGTAAAATGACCCT
GTTGGAGGTCCTGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGTGCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGC
GCTCTCGGTGGATGGTTCCTTTTCTGTTCATGATGGCTCCGCTGCGACTGGTATGGTGCTACGACGTCATGACGGTTC--
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>chr2A_1
TATTGTTTATGGCCTGGATCTGGTTAAGAAGGGTATTATATGGAGAGTGGGTGACGGTGCTGCGGTTAAAGCATGGCGTG
ATCCATGGATTTCGCGTGTCCATGATTACCGGCCGGTTACGCCTAAGAGAAACTGCAGGTTTAATCGTGTTTCTGATTTT
CTTGATAATAATGGTGCATGGAATATGGAGC-GACTTGAGGAGCATTTTTGGCCTATGGACATACATCATATTTTGAAAA
TTCGGACTTCACCTAGGAATCGTCATGATTTCCTTGCCTGGGCCCC--TGAAAAGAATGGGAGATTTAGTGTGAAGAGTG
CTTACCAGCTGGCTACACATGGACACGAGGATAATTTTGCAGGTGGTGCTTCGAGTACCTGCCCGGATGGTGAGCGTTCT
CTATGGTCATGTATCTGGCGAGCGAAAGTTCCACTCAAGATGCAGGTCACTGCCTGGAAGGTTACGGCTGGGGTCTTAGC
AACAAATGAATGCAAAGTGACTAGACATCTCTCAAATCGTGGAACATGTCCTGTGTGTGGCCTTGAGGTGGAGAGTTCCT
TCCATGCTTTAATTACATGCGGCCATGCAAGGGCCC--TTGGGAGGCTATGCGTGAGTTCTGGCCACTACCGACGACAGA
CCAACTGATAGACAATGGCGAGGAGTGGCTGTTACACGTTTTATCTGGATGTTCTGATCAAGTTCATGACATGGTTATTT
TGCTTATTTGGCGTATTTGGAGTCTCAAGTCAGATATAACACATGGCAAGGTAGTTCCTCCGTTGGAAATAAGTGTTGAT
TTCTTGGTCAGTTATCTAAAGTCTTTAGATCTTGCTCAGAGATATAGCACTGAAGAGATTATCAAAGGTAAAATGACCCT
ATTGGAGGTCCGGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGTGCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGT
GCTCTCGGTGGATGGTTCCTTTTCTGTTCATGATGGCTCGGCTGCGATTGGTATGGTGCTACGACGTCGTGACGGTTC--
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>chr7D_1
TATTGTTTATGGCCTGGATCTGGTTAAGAAGGGTATTATATGAAGAGTGGGGGATGGTGCTGTGATTAAAGCATGGCGCG
ATCCATGGATTCCGTGTGGCCATGATTACCGGCCGGTTACGCCTAAGCGAAACTGA--------------TTCTGATTTT
CTTGATACTAATGGTGCATGGAATATAGAGC-GACTTGAGGAGCATTTTTGGCCTATGGACGTACATAATATTTTGAAAA
TTCTGACTTCGCCTAGGAATGGTCATGATTTTCTTGCCTGGG--CC--TGAAAAGAATGGGAGATTTAGTGTGAAGAGTG
CTTACCGGCTGGCTACACATGAACACGACGATAATTTTGCAGGTGGTGCTTCCAGTACCTGCCCAGGTGGTGAGCGTTCT
CCATGGTCATGTATCTGGCGAGCGAAAGTCCCGCTCAAGATGCGGGTCACTGCCTGGAAGGTTGCGGCTGGGGCCTTAGC
AACAAATGAATGCAAAGTGACTAGACATATCTCAAATCGTGGAACATGTCCTGCGTGTGGCCTTGAAGTGGAGAGCTCCT
TCCATGCTTTAATTACATGCGGCCATGCAAGGGCCC-TTTGGGAGGCCATGCGTGAGTTCTGGCTGCTACCGGCAACGCA
CCAACTGATAGACAATGGCAAGGAGTGGCTGTTACATGTTCTATCTGGATGTTCTGATCAAGTTCGTGACATGGTTATTT
TACTTATTTGGCGTATTTGGAGTCTCAGGTCAGATATAGCACATGGCAAGGTAGTTCCTCCATTGGAAATAAGTGTTGAT
TTCTTTGTCAGTTATCTAAAATCCCTAGATCTTGCTCGGAGATATAGCACCGAAGAGATTATCAAAGGTAAAATGACCCT
GTTGGAGGTCCGGACTCCGGAACCTATCGGTAGCGGACA--GTGTGTGCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGC
ACTCTCGGTGGATGGTTCTTTTTTTGTTCATGATGGCTCCGTAGCGACTGGTATGGTGGTACGACGTCATGACGGTTC--
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>chr5A_1
TATTGTTTATGGCCTGGATCTGGTTAAGAAGGGTATTATATGGAGAGCGGGTGACGGTGCTGCGGTTAAAGCATGGCGTG
ATCCATGGGTTCCGCGTGGCCATGATTACCGGCCGGTTACGCCTAAGAGAAACTGTAGGTTTAATCGTGTTTCTGATTTT
CTTGATAATAATGGTGCATGGAATATGGAGC-GACTTGAGGAGCATTTTTGGCCTATGGACATACATCATATTTTGAAAA
TTCGGACTTCACCTAGGAATCGTCATGATTTCCTTGCCTGGGCCCC--TAAAAAGAATGGGAGATTTAGTGTGAAGAGTG
CTTACCGGCTGGCTACACATGAACACGAGGATAATTTTGCAAGTGGTGCTTCCAGTACCTGCCCGGGTAGTGAGCGTTCT
CTATGGGCATGTATCTGGCGAGCGAAAGTTCCGCTCAAGATGCGGGTCACTGCCTGGAAGGTTACGGTTGGGGCCTTAGC
AACAAATGAATGCAAAGTGACTAGACATCTCTCAAATCGTGGAACATGTCCTGTGTGTGGCCTTAAGGTGGAGAGTTCCT
TCCATGCTTTAATTACATGCGGCCATGCAAGGGCCC-TTTGGGAGGCTATGCGTGAGTTCTGGCCGCTACCGGCGACAGA
CCAACTGATAGACAATGGTGAGGAGTGGTTGTTACATGTTTTATCTGGATGTTCTTATCAAGTTTGTGACATGGTTATTT
TGCTTATTTGGCGTATTTGGAGTCTCAGGTCAGATATAGCACATGGCAAGATAGTTCCTCTGTTGGAAATAAGTGT----
----------GTTATCTGAAGTCCTTAGATCTTGCTCGGAGATATAGCACTGAAGAAATTATCAAAGGTAAAATGACCCT
ATTGGAGGTCCGGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGTGCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGC
GCTCTCGGTGGATGGTTCCTTTTCTGTTCATGATGGCTCGGCTGCGACTGGTATGGTGCTACGACGTCATGACGGTT---
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>chr7B_1
TATTGTTTATGGCCTGGATATGGTTAAGAAGGGT--TATATGGAGAGTAGGCGACGGTGCTGCGATTAAAGCATGGCGCG
GTCCATGGATTCCGTGTGGCCATGATTACCGGCCGGTTACGCCTAAGTGAAACTGTAGGTTTAATCGTGTTTCTGATTTT
CTTGGTACTAATGGTGCATGAAATACGGAGC-GACTTGAGGAGCATTTTTGGCCTATGGACGTACATCATATTTTGAAAA
TTTGAAGTTCACCTAAAAATTGTCATGATTTCCTTGCCTGGGCTCC--TGAAAAGAATGGGAGATTTAGTGTGAAGAGTG
CTTAACGGCTGGCTATGCATGAACACGAGGATAATTTTGCAGGTGGTGCTTCCAGTACCTGTTCGGGTGGTGAGCGTTCT
CTATGGTCATGTATCTGGCGAGCGAAAGTTCCGATCAAGATGCGGGTCACCGCCTGGAAGGTTGCGTCTGGGGCCTTAGC
GACAAATGAATGCAAAGTGACTAGACATCTCTCAAATCGTGAAACATGTCATCCGTGTGGCCTTGAAGTGGAGAGCTCCT
TCCATGCTTTGATTACATGCGGCCATGCAAGGGCCC-TTTGG-AGGCCATGCATGAGTTCTGGCCGCTTCCGGTAACGGA
CCAACTGATAGACAAAGGCAAAGAGTGGTTGTTACATATTTTATCTGGATGTTCTGAACAAGTTTGTGACATGGTTATTT
TGCTTATTTGGCGCATTTGGAGTCTCAGGTCAGATATAGCACATGGCAAGGTAGTTCCTCCGTTCGAAATAAGTGTTGAT
TTATTGGTCAGTTATCTAAAGTCCCTAGATCTTGTTCGGAGATATAGCACTGAAGAGATTATCAAAGGTAAAATGACCCT
GTTGGAGGTCCGGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGTGACATGGCCTCCTCCTTCAGTGGGCCAGGCGGC
GCTCTTGGTGTATGGTTCATGTA-TGTTCATGATGGCTCCGCTGCGACTGGTATGGTGCTACGACGTCATGACGGTTC--
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>chr3B_1
TATTGTTTATGGCCTGGATCTGGTTAAGAAGGGTATTATATGGAGAGTGGGCTACGATGTTGCGATTAAAGCATGGCGCG
ATCCATGGATTCCGCATGGTCATGATTACCGGCCGGTTACGCCTAAGCGAAAATGTAGGTTTAATCGTGTTTCTGATTTT
CTTCATACTAATGGTGCATGGAATATGGAGC-TTCTTGAGGAGCATTTTTGGCCTATGGACGTACATCATATTTTGAAAA
TTCAGACATCACCTAGGAATCATCATGATTTCCTTGCGTGGGCTCC--TGAAAAGAATGGGAGATTTAGTGTGAAGAGTG
CTT---GGCTGGCTACGCATGAACACGAGGATAATTTTGCAGGTGGTGCTCCCAATCCCTACCCGGGTGGTGAGCGTTCT
CTATGGGCATGTATCTGGCGAGCGAAAGTTCCACTCAAGATGCGGGTCACCGCCTGGAAGGTTGCGGCTGGGGCCTTAGC
AACAAATGAATGCAAAGTGACTAGACATCTCTCAAATCGTGGAACATGTCATGTGTGTGGTCTTGAAGTGGAGAGCTCCT
TCTATGCTTTAATTACATGCGGCCATGCAAGGGCAAATTAGC-AGGGCATGCGTGAGTTCTGGCCGCTACTGGCGACGGA
CCTACTGATAGACAATGGCAAGGA----TTGTTACATGTTTTATCTGGATGTTCTCATCAAGTTCGTGACATGGTTATTT
TGCTTATTTGGCGTATTTGGAGTCCCAGGTCAGATATAGCACATGGCAAGGTAGTTCCTCAGTTGGAAATAAGTATTGAT
TTCTTGGTCAGTTATCTGAAGTCCCTAGATCTTGCTCGGAGATATAGCACTGAAGAGATTATCAAAGGTAAAATGATCCT
GTTGGAGGTCCAGACTCCGAAACCTATGGGTAGTGGCCA--GTGTGTGCCATGGCCTCCTCCTCCAGTGGGCCAGGCAAC
CCTCTCGGTGGATGGTTCTTTTTCTGTTCATGATGGCTCCGCTGTGACTGGTATGGTGGTACTACGTCATAACGGTTC--
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>chr4B_1
TATTGTTTATGGCCTGGATCTGGTTAAGAAGGGTATTATATGAAGAGTGGTTGACAGTGCTGCGATTAAAGCATGGCGCA
ATCCATGGATTCCGCATGGCCATGATTACCGGCCGGTTACGCCTAAGCGAAATTGTAGGTTTAATCGTGTCTTTGAGTTT
CTTGATACTAATGGTGCATGGAATATGGAGC-GACTTGAAGAGCATTTTTTGCCTATGGATGTGCATCATATTTTAAAAA
TTCAGACATCACCTAGGAATCGTCATGATTTCCTTGCCTGGGCTCC--TGAAAAGAATGGGAGATTTATTGTGAAGAGTG
CTTACTGGCTGGCTACGCATGAACAAGAGGATAATTTTGCAGGCGATGCTTCCAGTACCTTCCCGAGTGGTGAGCATTCT
CTATGGTCGTGTCTCTGGCGAGCGAAAGTTCCCCTCAAGATGCGGTTCACCGCCTGGAAGGTTGCGGATGGGGCCGTAGC
AACAAATGAATGCAAAGTGACTAGACATCTCTCAAAATATGGAACATGTCTTGTGTGTGGCCTTGAAGTGGCGAGCTCCT
TCCATGCTTTAATTACATGCGACCATGCCAGGGCCC-TTTGGGAGGCCATGCGTGAGTTCTGGCCGCTACCGGTGATGGA
CCAACTGATAGACAATAGCAAGGAGTGGTTGTTACATGTTTTATCTGGATGTTCTGATCAAGTTCGTCACATGGTTATTT
TGCTTATTTGGCGTATTTGGAGTCTCCGGTCAGATATAACACATGGCAAGGTAGC-TCTCCATTGGAAATAAGTGTTGAT
TTCTTGGCCAGTTATCTAAAGTCCCTAGATCTTGCTCGGAGATATAGCACTGAAGATATCATCAAAGGTAAAATGACCTT
GCTGGAGGTCCGGACTCCGAAACCTATGGGTAGCGGCTAGTGTGTGCGCCATGGCCTCCTCCTCCACTGGGCCAGGCGAC
GCTCTTGATGGATGGTTCCTTTTCTGTTCAGGATGGCTCCGCTACGACTGGTATGGTGCTACAACGTCATGACGGTTC--
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>chr4B_1
TATTGTTTATGGCCTGGATCTGGTTAAGAAGGGTATTATATGGAGAGTGGGCTACGGTGTTGCGATTAAAGCATGGCGCG
ATCCATGGATTCCGTGTGGCCATGATTACTGGACAGTTATGCCTAAGCGAAACTATAGGTTTAATCGTGTCTCTGATATT
CTTGATACCAATGGTGCATGGAATATGGAGC-GACTTGAGGAGCATTTTTGGCCTATGGATGTACATCATATTTTGAGAA
TTCGGACATCCCCTAGGAATCGTCGTGATTTCCTTGCCTGGGCTCC--TGAAAAGAACGGGAGATTTAATGTGAAGAGTG
CTTACGGGTTGGCTACACATGAACACGATGATAATTTTGCAGGTGGTGCTTCCAGTACCTGCCTGGGTGGTGAGCGTTCT
CTATGGTCATGTATCTGGCGAGCGAAAGTTTTCCTCAAGATGCGGGTCACCGCCCGTAAGGTTGCGACTGGGGTCTTAGC
AACAAATGAATGCAAAGTGACTAGACATATCTCAAATCATGGAACATGTCCTGTGTGTGTCCTTGAAGTGGAGAGCACCT
TCCACGCTTTAATTACATGCGGCCTATG----------------------------------------------------
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>chr6D_395
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----------------------------------------------------------------------------TTTT
CTATGGTCATGTATCTGGCGA----AAGTTCTGGTCAAGATGCGTGTCACCGCCTGAAAGGTTGCGGGTAGGGCCTTAGC
AACAAATGAATGCAAAGTGACTAGACATCTCTCAAATCGTGGAACATGTCGTGTGTGTGGTCTTGAAGTGGAGAGCTCCT
TTCATGCTTTAATTACATGCGGCCATGCAAGGGCCA-TTTGGGAGACCATGCATTAGTTCTGGCCGCTACCGGCGACGGA
ACAACTGATAGACAATGGCAAGGAGTGGTTGTTATATGTTTTATCTGGATGTTTCGATCAAGTTCATGACATGGCTATTT
TGCTTATTTGGCGTATTTAGAATCTCAGGTTAGATATAACACATGGCAAGGTAGTTCCTCCGTTGGAAATAAGTGTTGAT
TTCTTGGTCAGTTATCTGAAGTCCCTAGATCTTGCTTGGAGATATACCACTGAAGAGATTATCAAAGGTAAAATGACCTC
GTTGGAGGTCCGGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGTGCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGC
CCTCTCGGTGGATGGTTCCTTTTCTGTTCATGATGGCTCCACTGCGACTAGTATGGTGCTACGACGTCATGACGGTTC--
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>chr3D_1087
CCTCC---------------------------------------------------------------------------
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-----------------------------------------------------------TCCGGCCAGGCAGGCGGCTAT
ATATACCACCGCA-AGCAGCGGCCACTGCTCT----TCACCAAGCAAGAGCATAACCAATCAACCACAAGTCGATTTGCG
AAGCACT----CTCCGATCACAACCCAAGACCACCATGGCTGACAAGTGCGGCAACTGCGACTGCGCCGACAAGACCCAG
TGCGTGTAAGTG-----CCT---AGCCAGCAAGATCGAGCTATACATAAACCTTTCTG----------TCGATCGAGCTG
ATCAATCTCTTCTGCATACCTCTAACTTGCTGTCTTGCTTCTAGCTACTCCACATGATCTTCATCTTCGTATTCGTATCG
ATCTT--TCTTTGCTCCACTCTGTCTCTGTCTGAACATGTTCCTGCGGTTTTG--------TCATGTGTGCAGGAAGAAG
GGCAACACCTACGGCATCGTCATGGTTGACACCGAGAAGAGGTACTG-----------TACTATTTCGGTTCGTTGATCC
GCCGTTAAGCTA--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GAACAAAATAACCAAT---------------------
--------TAACGTTGGTCACTTGGTGCATGCATGTGCAGCCACTTCGAGGTGCAGGAGACCGCGGAGAACGACGGCAAG
TGCAGCTGCGGCACCAGCTGCACCTGCACCAACTGCACCTGCGGCCACTGAAGAAGCCCTCCCCGCTGGGCCTCTCGTCA
----CGTACGCGTCTACCCGTACTAGTAACCCGTGCCAATAAAAGTCTGTACGTGTGTGTGTGTGTCTACGTCTCTTCTG
TTGTCG---TGCGAAAACCTGAAGGTTAAGCTGATGATGTGCGCATAGGATACCGGATCGGCC-------TCGATCCCGT
GT---TCCCGTGTAACCGGTGGCTGAGCTTCAGGTTGTACTGCTATGTGGTTGTGAGCTCGCACGCTTTGTGCCATGTGA
CTTCCATTTCGTGTATCTTTGTTGCATGGAATGAAATTTATGGTGTGGTTTTCTAGCTACTCCCTCC-------------
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>chr3B_1087
CCTCC---------------------------------------------------------------------------
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-----------------------------------------------------------TCCGGCCAGGCAGGCGGCTAT
ATATACCACCGCAAAGCAGCGGCCATTGCTCGCTCCTCACCAAGCAAGAGCATAATTAATCAACCACAAGTCCATTTGCG
AAGCACTCTCGCTCCGATCACAACCCAAGACCACCATGGCTGACAAGTGCGGCAACTGCGACTGCGCCGACAAGACCCAG
TGCGTGTAAGTG-----CCTACCAGACAGCCAGATCGAGCTAATTAAGCCTCTTGTCGATCGAGCTAATCCATCGATCTG
ATCCGTCTTCTCTACGTGCCTCTAACTAGCCACTAGCTAAAAATCAACATCGTCTCTATGTAGTCCGATG-TTTGTATTG
ATCTTTGTCTTTGCTCTACTCTCTCTCT--CTGAACATGTTCCTGTGGTTTTT--------TCATGCGTGCAGGAAGAAG
GGCGACAGCTACGGCGTCGTCATAGTTGACACCGAGAAGAGGTACCGCGTACTATTTC----------------------
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----------ACTTCATCCATCCGCCTGTTCGGCTAGTGGCTAGTTAGAGGACAGAAAAACTAGTCAGATCGATGGCAAG
TTATCTACGTGCCGTCTCGGCAAGTTA------------------TCGAGGTGCAGGAGACCGCGGACAACGACGGCAAG
TGCAAGTGCGGCACCAGCTGCACCTGCACCAACTGCACCTGCGGCCACTAAAGA--------------GGCCTCTCGTCA
----CGTACGCGTCTACCCGTACTAGTAACCCGCCCCAATAAAAGTCTGTACGTGTGTGTG----TCTACGTCTCTTCTG
TTGTCG---TGCGAAAACCTGAAGGTTA-GCTGATGATGTGTGCGTAGGATATCGAATCGGCGTT---GATCGATCCCGT
GT---TCCCCTGTAACCAGTGGCTGAACTTCAGGTTGTACTACTATGTGGTTGTGAGCCCGCACGCTCTGTGCCATGTGA
CTTTCATTTCGTGTATCTTTGTTGCATGGGATGAAATTTATCGTGTGGTTTCTTAGCAACTCCCTCCGT-----------
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>SNPs
-------------SS-----------------------------------------------------------------
-------------S------------------S-------------------------------------------SS--
-------------------------------S-----------------------------------S------------
------------------------------------S---------SS--------------------------------
-----------------------------------S----------------------------S---------------
--------S-----------------------------------------------------------------------
----------------------------------S---------------------------------------------
-----------------S-S------------------------------------------S-----------------
----S----------------------------------------------------------------S----------
--------------------------------------------S-----------------------------------
------S---------------S-------------------------------------S-S----S------------
------------------S-----------------S-------------------------------------------
---S-----S---------------------S---S--------------S---------------------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S---SS--------
---------------------S------------------------------S---------------S------SSSSS
SSSS-SSSS-S---------------------S-----------------------------------------------
-----------SSSSSS-------S-----S-------------------------------------------------
------------S------S--S----------------------------------S-S---------S----------
-------------------S------SSS--------------------SS--SSSSSSSS-------------------
------S-------------------S----------------------S----S-SS--S------SS----S------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----------SSSSSS-S--SSSS---SSS-SS----S------S--S-SS-SSSSSS-SS---SS-S-S
SS-SSSS----------------------------------------------------S--------------------
------------S---------------------------------------S-S----S-----------------SSS
SSSS-------S-----------------------S-------S---SS-S-----SS--------------S-S--S--
------SSS---S-S------------S-----------S------------SSSSS-S--SSSSSSS-----S------
--SSS------------------------------SS------------------------S---SS-----S-------
-----------S----SSS-------S------------S----------SS----S----S-------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_287
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---------------------------TGATTTCCTTGTCTGGGCCC---------------------------------
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>reverse_1844
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---AGACCTAACGTTGGCCCATG---------------------------------------------------------
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>forward_1667
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-----------------------------------------------GGTTGAAACTGCCCACACAC-------------
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>reverse_2958
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-----------------------------------------------------------------------------CCT
ATCCCGCTTGTCGTTGT---------------------------------------------------------------
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