>input_sequence_57277
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-----------------------ATGGGCAGGAAACCCTCGGCTTCCGCCGCCGCCGCCGCTGC---------CGCTGCG
GCTGCCGACCACGACTCCACCGTTGCCAGCGCCAAGGCCGCCGAACTCCTAGCAGCAGCCGCTGACTGGGAGGGCATCCA
TGGGCACTCCATGTTCTTCGACGCCCTCGTTCAGCTTATACCCCCGCGCTTCTACCTCTCCGCCGACGATGATGTCCGCC
CCTACTACCAGGGGCTCTCCAAGGCCGCCAAGGCGGCCATGAAGGCTCAGTCCCGCGCCAATATCAAGGCTGCCCGCCGA
GCCCGCCTCGACCCCGCGGGCCCGCCTTCCTCCACCCTGGACCTTCTCAAGAAGTCCGTCGCCGACCAAGAGGCGGAGGA
GAAGAAGGAAGAGGAGGAGGATAACTCAGAAGACGGAAGCCAGGAGTCCGACGACGAGGCAACCTCAGAGGGTGGCGACG
ATGACCAGGACGAGGAGGAGGGAGATGAAGAGGAGC------------AGGCAGAGGATGAAAAGGAGGAGATGCAGATG
GCCCCGGCAGCAGTTGTTTCTGAAGACCGGTCGGTGACTTACGAGGAGCTGCGAGAGCGGCTTCATCGCCGCATTACAGA
GCTCCGTGGGAATCGGTGCACCAGGCCAGAGTTCCTGAATAAGCCTCAGAAGGAGAAGGGTAAGAAGGGAAAGGGTGCTA
AAGTGAAGGGGAAGGAGGAGGGTACAAAGCGGAAGCGTGAGGATGGCACCGCGGATGCGGAGGGTAAGGATGGGAAGAAG
CACAAGAAGGAAGGGGAAGAGAAGGCACCAGATATCATGTATGGCAATGTGCTGGTTGATCCAAAGGAAGCAAGGCGGAG
GAAGAAGAGGAGGATCAAGAACAAGAAGAAGGAGCTGGAGCAGGCTAAGCGGATGCAGAGGGCAAAGGAGGATCCTAAAA
AGGCCACCAAGATGGCCTGGGATGTGGCAACAAGGCGCGCAGCTGGGGAGAAGGTGCACGACAACCCCAAGTTGATTAAA
GAGAGCATGAAGAAGGATAAGAAGCGGCAGGAGAAGCACGCGGAGGAGTGGAAGGACAGGCAGAGGACAGTGGACATCAA
GAAGAAGCAGAAGCAGAATAAGCGGAAGGAGAACATCCAGGGGCGGGCACAGGAGAAGAAGGCGCGCAAAATAGAGAAGC
GTGAGAAGAAGCTTATGCGCCCTGGTTTTGAGGGGCGCAAGGAAGGCTATGTCAACGAGTGA------------------
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>chr6B_1_TraesCS6B01G262500
TTTTCAAAACTAGATCCCATGTTGATAGGTTTTGACAAACTTTTTTTTCATGAAAAAATCGGAC--GAA-AAAA--CCCG
ACGAAAAAACCGAACCGGGAACCC-GGTTTTTTTCC-CTTTCCGAAAGAGGCACGCCCATGCCTCTGACGAAATCACAAC
CGTGCCTCTCGCGGAAGCAAAATCGTGCCTCTCGCGAAAGAAAA-AACA-G---AAAACACAT-TTTTTTC--CCTTTCC
GAAAGAGGCACGCTCGTGCCTCTCGCGAAAGCACAACCGTGCCTTTCGCAGAAGCAAAACCGTGCCTCTCGCGAAAGAAA
AAAAAACAAAAAACGTG----TTTTTTTTCCGTCTCCG--AGGAGGCACGGCCGTCACTCTCGCGAAAGCACAACCGTGC
CTCTCGCAGAAACAAAACCGTGCCTCTCGCGAAAGG--AAA-A---A-CAAACAAAAAACACTTTTTTTTCCGTTTCT--
-AAGAGGCACGGCCGTG-----------------------CCTCTCGCGAAAACAAAACCGTGACTCTCGC---------
-----------------GCAAAA------------------AAAT--ATTATTTT-T--T-GATTTTGT-----------
-----------TTATCGAAAAGCTAGGAAAGACCGGCGGAAAACCAAAACGTAAAAACAACCCGAGAAAAAA-C-CC-GT
TTAAAAAGCTAAAAACGCGTGCGAAAAAATA-A---AAAAA--CAAAATCCGGAGGGAGCGCCCAGAGCGCGACACGTGG
CGAATGACTGAGAGCGTGTCAAGTGGCGCTGATCGTTGCAGGGCTCGTGAAGGAGCGCTCGTTAATTAGTTGCTCCCCAC
GAAAACATTCAGGTGAGAGGTAGGTGCTCTCGCTGTAAGCGAGATATAATTTCCCTCGGCTCACCCCTCAAATTGTTTTT
CCTCGGCTCAGACGGAAG-AAGGGCCAGCGCCCACGACATTACG------CTGTATAGTTATCCATTAGAAGCCCAGTAT
GGCCCATCAAACTAAAACCACAC-TGCAGCCATAATATAGGCCCGTTGAAGGCCAGAGACAGCAAACCCCTCCATCGCTG
AAACCCTCCAAACGCTTACCGCAATGGGCAGGAAACCCTCGGCTTCCGCCGCCGCCGCCGCTGC---------CGCTGCG
GCTGCCGACCACGACTCCACCGTTGCCAGCGCCAAGGCCGCCGAACTCCTAGCAGCAGCCGCTGACTGGGAGGGCATCCA
TGGGCACTCCATGTTCTTCGACGCCCTCGTTCAGCTTATACCCCCGCGCTTCTACCTCTCCGCCGACGATGATGTCCGCC
CCTACTACCAGGGGCTCTCCAAGGCCGCCAAGGCGGCCATGAAGGCTCAGTCCCGCGCCAATATCAAGGCTGCCCGCCGA
GCCCGCCTCGACCCCGCGGGCCCGCCTTCCTCCACCCTGGACCTTCTCAAGAAGTCCGTCGCCGACCAAGAGGCGGAGGA
GAAGAAGGAAGAGGAGGAGGATAACTCAGAAGACGGAAGCCAGGAGTCCGACGACGAGGCAACCTCAGAGGGTGGCGACG
ATGACCAGGACGAGGAGGAGGGAGATGAAGAGGAGC------------AGGCAGAGGATGAAAAGGAGGAGATGCAGATG
GCCCCGGCAGCAGTTGTTTCTGAAGACCGGTCGGTGACTTACGAGGAGCTGCGAGAGCGGCTTCATCGCCGCATTACAGA
GCTCCGTGGGAATCGGTGCACCAGGCCAGAGTTCCTGAATAAGCCTCAGAAGGAGAAGGGTAAGAAGGGAAAGGGTGCTA
AAGTGAAGGGGAAGGAGGAGGGTACAAAGCGGAAGCGTGAGGATGGCACCGCGGATGCGGAGGGTAAGGATGGGAAGAAG
CACAAGAAGGAAGGGGAAGAGAAGGCACCAGATATCATGTATGGCAATGTGCTGGTTGATCCAAAGGAAGCAAGGCGGAG
GAAGAAGAGGAGGATCAAGAACAAGAAGAAGGAGCTGGAGCAGGCTAAGCGGATGCAGAGGGCAAAGGAGGATCCTAAAA
AGGCCACCAAGATGGCCTGGGATGTGGCAACAAGGCGCGCAGCTGGGGAGAAGGTGCACGACAACCCCAAGTTGATTAAA
GAGAGCATGAAGAAGGATAAGAAGCGGCAGGAGAAGCACGCGGAGGAGTGGAAGGACAGGCAGAGGACAGTGGACATCAA
GAAGAAGCAGAAGCAGAATAAGCGGAAGGAGAACATCCAGGGGCGGGCACAGGAGAAGAAGGCGCGCAAAATAGAGAAGC
GTGAGAAGAAGCTTATGCGCCCTGGTTTTGAGGGGCGCAAGGAAGGCTATGTCAACGAGTGACGTCTACATTGGAGATGA
TGGTGACTGAGTACTGTATCTGCTTTATTTTTGCAAGGTTGCATATGCTGGTGTTGGTGTTGGTACTGGAAATAGGTATC
CAGATCATGACTACCATACTTAATTATAGCTTGAAGGTTGAATGTTTGGCAGGTCATCTGGAAAAGATTTGGAGACATTC
CTTCTGCTGTATTTTCGTTGAGCTTAGATAAATTTGTTGAAAAACAAACTTTCATGTCTGGCTTCATAATTATCTCTAGC
ACTAGACCAAGGAAATATTAATGTTCTTTTATGTTCACTGTCCGAGGAAATGTTAATGATGCTTCAATGGATTTTGCTCT
TTTCTTTGTTATTCCTAGCAGTGGTCTGATAGATTAGTTATGTCAAATTATGCATCAGTGAAGATGTTCCGGGTACAGGC
TTATCTGAATTCTTCTTTGCTTGGTAAATTGGAATCCACAATGCCCACTTCTCATATGTCAT-GGATACGCCACATGTCA
ATATTCTATATCAATCTTATTTTGCAAGCTTA--CTGTAGTTATGTACAGTCTGTATTATGGTGTTGAGTTATACTGCAG
GACGCTGATTTGTTAGTTTACTCTCTGCAGTTATATCCTAGATTAATTTGCAGCCTTGTTAGTAAGGCTACATGTATACC
TTTGTGTTTATTCATTTGTGTCCACTGTTGTCAAGGGTGAGGCACTTGTTCCCTTCCATTTCTTGCCAGCAAAGGGGACA
GACAACACCTGCATCTATATAAAAAAGGCGATTTTCGGCCTGTCTTGTATGTGCACATTTCTGTTGTTACATATTTTACC
-TGCTTGACAAAGTGCAAAAAAGCAAAAGGTATCA-TTATATAGGTACTTGGAATGCAAGGTTAGGACCATCTCTCTCGA
CAAGGTATTCTTTCTGTTCGGCAACAAGTTTGATAGATTTATATGAATCGTGGCGGATGAGGGAGGATTGATGGAATGTA
GATGCGCCTTCCTTAGCAAGCACTTCC
>chr5B_2
TTTAA--AACTATATGCCATGTTGATAGGTTTTGACGAACTTTTTTTCCATGAAAAAAAAGCGGACAAAAAAAAAACA--
------------AACCGGGAGCGC--GGATTTTTTC-CTTTCCGGAAGAGGCACGCCCGTGCCTCTGACTAAATCACAAC
CATGTCTCTCGCGGAAGCAAAACCGTGTCTCTCGTGAAAGAAAA-AAAAAC---AGAAAACACATTTTTTT--TCGTTTT
CGAGGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAAATGTGCCTCTCATGAAAGATA
AAAAAACAAAAAACATG----TTTTTTTC--GTTTCC---AAGAGGCACGG-----------------------CCGTGC
CTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGAGAAAA-A---A-AAAATAGAAAACGCGTTTTTC-CCGTTTCC--
-AAGAGGCACGGCCGTG-----------------------CCTCTCGCGAAAACAAAACCGTGACTCTCGC---------
-----------------AAAAAA------------------ATGC--GTTTTTTG-CGGG-AATTTTTT-----------
-----------TGGTCAAAAAGCTAGGGAAGACCG-TGGAAAATCAAAACATCAAGAAAACCCGAAAAAAAA-C-C--GT
TTAAAAAGCCG-AAACGCGTGCGGAAAAATA-A---AAAAG---AAAATCCGGAGGAAGCACCCAGAGCGCGACACGTGG
CGAAAGGCTGACAGCGCGT-AAGTGGCGCTGATCGTTGTGAGGCTCCCAAAGGAGCGCTCGTTAATTAGT----------
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>chr6B_3
--TTCAAAACTAGATCCTATGTTGATAGATTTTGACAAACTTTTTTTCAC---GAAAAAACCGGACAAAAAAAA--CC-G
ACGAAAAAACCGAACCGGGAACAC-GGGTTTTTTTCTCTTTCCGAAAGAGGCACGCCCGTGCCTCTGACAAAATCACAAC
CGTGTCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGAAAA-AAAC-A---GAAAA-CACATTTTTTT--CCTTTCC
GAAAGAGGCACGCCCGTGCCTCTCGCGAAAGCATAACCGTGCCTCTCGCCGAAGCACAACCGTGCCTCTCGCGAAAGAAA
AAAAA-CAGAAAACAAT---TTTTTTTG----TTTCCG--AGGAGGCACGTCCGTGACTCTCGCGAAAGCACAACCGTGC
CTCTAGCGGAAGCAAAACCGTGCCTTTCGCGAAAG----AA-A---A-AAAACAGAAAACACGTTTTTTTCCGTTTTC--
-AATAGGCACGCCTGTGCCTCTCGCGAAAGCACAACCATACCTCTAGCGAAAACAAAACCATGACTCTCGC---------
-----------------GGAAAA------------------AATGCGTTTTTTTG-CGC--AATTTTTT-----------
-----------TGGTCGAAAAGGTAGGGAAGACCGGTGAAAAACCAAAACGTAAAAAAAAACC-CGAAAAAA-A-CC-GT
TTAAAATGCCGAAAATGCGTGCGGAAAAATT-T---AAAAA--TAAAAATTCGGGAAGAGT-----------ACACGTGG
CGAATAGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCAAGGCTCCCCAAGGAACGCTCGTTAATTAGTTGCTGCCCC-
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>chr3B_3
--TTCAAAACTAGATCCCATGTTGATAGGTTTTGACGAAGTTTTTTTTCATGAAAAAATCGGAT--GAA-AAAA--CC-G
ACAAAAAAACTGAATCGGGAACAC-GGTTTTTTTTC-CTTTCAGAAAGAGGCACACCCGTGCCTCTGACGAAATCACAAC
CATGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGGAAGAAAA-AAAA-T---AGAAAACGCGTTTTTTC--CCTTTCC
GGAAGAGGCACACCCATGCCTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAAGCGTGCCTCTCGCGAAAGAAA
AAAAAAGAAAAAACGTG----TTTTTTTT--GTTTCCG--AGGAGGCACGGCTGTGACTCTCGCGAAAGCACGCTCGTGC
CTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGG--AAA-A---AGAAAAAAGAAAACACGTTTTTTTTCGTTTCC--
-AAGAGGCAAGGCCGTG-----------------------CCTCTCGCAAAAGCACAACCGTGCCTCTCGCGAAAACAAA
ACT-GTGACTCTCACGAAAAAAATGT--------------------GTTTAAAAAG------------------------
--------------CCGAAAAGCTAGGGAAGACCGGTGAAAAACCAAAACGTAAAAAAAAC-----AAAAAA-A-TC-GT
TTAAAAAGCCGAAAACGCATGCGGAAAAATA-A---AAAAA--ATAAAATCGGAGAGAGCGCCCAGAGCGCGACACGTGG
CGAATGGCTGAGAGCGCGCCAAGTGGGGCTGATCGTTGCGAGGCTCCCGAAGGAGCACTCGTTAATTAGTT---------
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---------------------------
>chrUn_3
--TTCAAAATTAGATCTCCTGTTGATAGGTTTTGATGAACTT-TTTTTTACGAAAAAACCGGAG--GAA-AAAA--CC-G
ACGAAAAAACC-AAACCGGAACAC-GGGTTTTTTCC-CTTTCCGAAAGAGGCACGCTCGTG-CTCTGACGAAATCACAAT
CGTGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGGAAAAAAAAA-CAGA-A---AACG--CGTCTTTTTTC--CCTTTCC
GGAAGAGGCACGCCCGTGCCTCTTGCGAAAGCACAACCGTGCTTTTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGAAA
AAAAA-CAGAAAACATG-----TTTTTTT-CGTTTCCG--AGGAGGCAAGGCCGTGA--CTCGCGAAAGCACAACCGTGC
CTCTCGCGGAAGCAAAACCGTGCCTCTCTCGAAAGG--AAA-A---A-AAAACAGAAAACACGTTTTTTTTCGTTTCC--
-AAGAGGCACGGCCGTG-----------------------CCTCTCGCGAAAA--AAACCGTGAGTCTCGC---------
-----------------GAAAAA------------------ATGC--GTTTTTTT-T--GCACAAAAAAATTATATATAT
ATTAAAAAAAATGGTCGAAAAGCTAGGGAAGACCAGTGGAAAACCAAAATGTCAAAG--AAACAAAACAAAA-A-CC-GT
TTAAAAAGCCGAAAATGCATGCGGAAAAATA-A---AAAAAATAAAAATTCGGAGGGAGCGCCAAGAGCGCGACACATGG
CGTATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGCTCTCGAAGGAGCGCTCGTTAATTAGTTGCTCCCACG
AA------------------------------------------------------------------------------
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>chr4A_3
--TTCAAAACTAGATCCCATGTTGATAGATTTTGACGGAACTTTTTTTCATGAAAAAAACGGAC--GAA-AAAA--CA--
------------AACCGGGAGCAC-GGGTTTTTTCC-CTTTCCAAAAGAGGCACGGCTGTGCCTCTGACGAAATCACAAC
CGTGCCTCTCGCGGAAGCAAAACCGTGTCTCTTGTGAAAGAAAA-AAAC-A---GAAAAATGTGTTTTTTTTTCGTTTCC
CCGGGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGAGA
AAAAAACAAAAAACATGC--TTTTTTTC----GTTTCC--AAGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGC
CTCTCGCGGAATCAAAACCGTGCCTCTCGCGAAAGG--AAA-A---A-AACAGAAAACGCA-------TTTTTTTTCC--
-AAGAGACACGGCCGTG-----------------------CCTCTTGCGAAAGCACAACCGTGTCTCTCGCGAAAACAAA
ACCGGTGACTCTCGCAAAAAAATA--------------------C--GTTTTTTG-C--C-GATTTTTT-----------
-----------TTTCCGAAAAGTTAGGGAAGACCGGTGGAAAACCAAAACGTCAAAA--AAATCCGAAAAAACC-CC-GT
TTAAAAAGCCAAAAACGCGTGCGAAAAAATA-A---AAAAA--TAAAATCTGGAGGAAGCGTCCAAAGCGCGACACGTGG
CGAATGGCTGAGAGCGCGCCAAGTGACGTTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCGTTAATTAGTTGCTCCC---
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>chr5B_3
--TTCAAAAATAGATCCCATGTTGATAGGTTT-GACGAACTTTTTTTTCACAAAAAAAAT-CGGACGAAAAAAA--TC-G
GACGAAAAACCGATCCGGGAGCAC-GAGTTTTTTCC-CTTTCCGAAAGAGGCACGC-----------------------C
CGTGCCTCTCGCGAAAGCAAAACCGTGCCTCTCGCGAAAGAAAA-AAAA-C---AGAAAATGCGTTTTTTT--CCGTTTC
CGAGGAGGCACGGCCGTGACTCTCGCAAAAGCACAACTGTGCCTCCCGTGGAAGCAAAACCATGTCTCTCGCGAAAGAAA
AAAAATCAGAAAACGTG----TTTTTTC----GTTTCC--AAGAGGCACGGCCGTGTCTCTCGCGAAAGCACAACCGTGC
CTCTCGCGGAAGCAAAACCGTGCATCTCGCGAAAGG--AAA-A---A-AAA-CAGAAAACGCG--TTTTTCCGTTTCC--
-AAGAGGCACGGCCGTG-----------------------CCTCTCGCGAAAACAAAACCGTGACTCTCGC---------
-----------------GAAAAA------------------ATGT--GTTTTTTTACACA-GTTTTTTT-----------
-----------TTGTCGAAAAGCTAGGGAAGACCGATGGAAAACCAAAACGTCAAAA--AACAAAAAATAAA-A-TC-GT
TTAAAAAGCCAAAAACGCGTGCAAAAAAAAA-ATAAAAAAA--TAAAATCCGGAGGAAGCGCCCAGAGCGCGACACGTGG
TGAATGGCTGAGAGTGCGCCAAGTGGCGCTGATCGTTGCTAGGCTTCCGACGGAGCGCTTGTTAATTAGTTGCTTCCC--
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>chr1B_3
--TTCAAAAGTAGATCCCATGTTGATAGGTTTTGGCGAACTTTTTTTCAC---AAAAAAAGGAC---AAAAAAA--CC-G
ACGAAAAAACCGAACCGGGAGAAC-GGCTTTTTTTC-CTTTCCGAAAAAGGCACGCCCGTACCTCTGACAAAATCACAAC
AGTGCCTCTCGCGGAAGCAAAACCGTGACTCCCGTGAAAGAAAA-AAAA-C---AGAAAACGCGTTTTTTT--CCGTTTC
CGAGGAGGCATGGCTGTGACTCTCGCGAAAGCACAAACGTGCCTCCCGCGGAAGCAAAACCGTGACTCTCACGAAAAAAA
TAGAAAAC-------AT---TTTTTTCC----GTTTCC--AAGAGGCACGACCATGACTCTCGCGAAAGCACAACCGTGC
CTCTTGCGGACGCAAAACCGTGACTCTCGCGAAAGG--AAA-A---A-TACAGAAAC--TGCGTTTTTTTTCGTTTCC--
-GAGAGGCACTGCCGTG-----------------------ACTCTTGCGAAAGAAAAAATGTGTTTTTTGC---------
-----------------GCAATA------------------TTTT--TTTTTTGA-A--T-TTTTGTTG-----------
-----------TTGTCGAAAAGCTAGGGAAAACCGGTGGAAAACCAAAACGTCGAAA--AAACCTGAAAAAA-A-TC-AT
TTAAAAAGCCGAAAACGCGTGCGGAAAAATA-T---AAAAAAACAAAATCTGGAGGGAGCGTCCAGAGCGCGACATGTGA
CGAATGACTGAGAGCGCGTCAAGTGGCGCTGATCGTTGCGAGGCTC----------------------------------
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>chr4B_3
--TTCAAAACTAGATCCCATGTTGATAAGTTTTGACGAACTTTTTTCACG----------------AAAAAAAT--CG-G
ACGAAAAAACCGAACCGGGAGCACAGGTTTATTTCC-CTTTCCGAATGAGGCACGGCCGTGCCTCTGACGAAATCACAAC
CGTGCCTCTCGTGAAAGAAAG-------------------------AAAAC---AGAAAATGC-ATTTTTT--TCGTTTC
CGAGGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGCGCCTCTCGCGGAAGCAAAACCGTGCCTCCCGCGAAAGAAA
AAAAA-CAT-----GTT----TTTTTTT----GTTTCC--AAGAGGCACGGCCATGACTTTCGCGAAAGCACAATCATGC
CTCTCGCGGAAGCAAAACCATGCCTCTCGCGAAAGG--AAA-A---A-AAA-TAGAAAATGCATTTTTTTTCGTTTCC--
-AAGAGGCACGGCCGTG-----------------------CCTCTCGCGAAAGCACAACCGTACCTCTCGCTAAAACAAA
ACC-GTGACTCTCGCGAAAAAAATGT--------------------GTTTTTTTG-CACA-ATTTTTTT-----------
-----------TGCTCGAAAAGCTAGGGAAGACCGGTGAAAAACCAAAACGTCAAAAAAAACAGAAAAAAAA-A-TC-AT
TTGAAAAGCGAAAAACGCGTGCGGAAAAATA-A---AAAAC--CAAAATTCAGAGGGAGCGCCCAGAGCGCGACACGTGG
TGAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCGTTAATTAGTTGCTCC----
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>chr2B_3
--TTCAAAACTAGATCCAATGTTGATAGGTTTTGACGAACTTTTTTTTCACGAAAAAACCGGAT--GAA-AAAA--CC-G
A-------------ACCGGAACACGGGGTTTTTTCC-CTTTCCGAAAGGGGCACGCCCGTGCCTCTGACGAAATCACAAC
CGTGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGAAAAGAAAAAC---AAAAAATGTGTTTTTTT--ACTTTCC
GAAAGAGGCACGCCCGTGCCTCTCGCGAAAGCACAA-----------------------CCGTGCCTCTCGCGAAAGAAA
AAAAAACAGAAAACGTG----TTTTTTTT-CGTTTCCG--AGGAGGCACGGCCGTGA--CTC------------------
---TCACGGAAGCAAAACAGTGCCTCTCGCGAAAGG--AAA-A---A-AAA-CAGAAAACACA-TTTTTTTCGTTTCC--
-AAGAGGCACGGCCGTG-----------------------CCTCTCGCGAAAA----AATGCGTTTTTTGTGC-------
------------------AAAAA------------------AAAAAATTTTTTGA-A--T-TTTTTTTT-----------
-----------CTGTCGAAAAGCTAGGGAAGACCGGTGGAAAACCAGAACGTCAAAA--AACC-GAAGAAAA-A-CC-GT
TTAAAAAGCCAAAAACGCGTGCGAAAAAATA-A---AAAAA--CAAAATCCGGAGGGAGCGCCCAGAGCGCGACACGTGA
CGAATGGCTGAGAGCACGCCAAGTGGAGCTGATCTTTGCGAGCCTCTCAAAGAAGCGCTTGTTAATTAGTTGCTCCC---
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>chr7B_3
--TTCAAAACTAGATGCCATGTTGATAGGTTTTGCCGAACTTTTTTTTCATGAAAAAAAAGGCT--GAAAAAAA--CG-G
ACGAAAAAAACGAACCGGGAGCAC-GGGTTTTTTCC-CTTTCCGAAAGAGGCACGCCCGTGCCTCTGAAGAAATCACAAC
CGTGCCTCTTGCGGAAGCAAAACCGTGCCTCTCGTGAAAGAAAA-AAAAAC---AGAAAATGCGTTTTTTT--TCGTTTC
TGAGGAG-----------------------GCACAGCCGTGACTCTCGTGGACGCAAAACCGTGCCTCTCGCGAAAGAAA
AAAAAACCGAAAACGTG----TTTTTTT----GTTTCC--AAGAGGCACGACTGTGACTCTCGCGAAAGCACAACCGTGC
CTCTCGCGGAAGCAAAACCGCGCCTCTCGCGAAAGG--AGA-A---A-AAA-CAGAAAATGCATTTTTTTTCGTTTCC--
-AAGTGGCACGACCATG-----------------------CCTCTCGCGAAAGCACAACCGTGCCTCTCGCGAAAACAAA
ACC-GTGACTCTCGCGAAAAAGA------------------ATGT--GTTTTTTTGCGCAATTTTTTTT-----------
-----------TGGTCGAAAAGCTAGGAAAGACCGATGGAAAACCAAAACGTCAAAA--AACC-CAAAAAAA-A-CCTGT
TTAAAAAGCCAAAAACGTGTGTGAAAAAATAAA---A-------AAAATCCGGAGGGAGCGCCCAGAGCGCGACACGTGA
CGAATGACTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAAGCTCCCGAAGAAGCCCTCGCTAATTAGTTGCTCCC---
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>chr7A_63
----------------------------------------------------------------ACGAAAAAAC--CA-G
ACAAAAAAACCGAACCTGGAGCAT-GGGTTTTTTTC-CTTTCCGAAAGAGGCACGCCCATGCCTCTCACGAAATCACAAC
CGTACCTCTCTCGGAAGCAAAACCGTGACTCTCGCGGAACGAAA-AAAAATAAAAGAAAACGTGTGTTTTT--TCGTTTC
CGAGGAGGCACGGCCGTAACTCTCGCGAAAGCACACCCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGGAA
AAAAAACAACAGAAAATGCATTGTTTTC----ATTTCC--GAGAGGCACGGCCGTGACTCTCGCAAACGCACAACCGTGC
CTCTCGCGGAAGCAAAACCGTGACTCTCACAAAAG----AA-AAATA-AAA-TAGAAAATGCATTTTTTTCCATTTCC--
-GAGAGG---------------------------------------------------------------------CAAA
ACC-GTGACTCTCGTGAAAGAAATAAAATGTGTTTTTTCGCACAAATTTTTTTTT-T--G-AATTTTTT-----------
-----------TTGTCGAAAAGCTAAGGAAGACAGGTGGAAAACCAAAACGTCGAAA--AAACCCGGAAAAA-AGTC-GT
TTAAATAGCCGAGAACGCGTGCGGAAAAATAAA---AAAA--------TCCGAAGGGAGCGCCCAAAGTACGACACGTGG
CAAATGGCTGAGAGCGCGTCAAGTGGCGCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCGTTAACTAGTGGCTCCC---
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>chr1B_101
--------------------------------------------------------------------------------
--------------------------GTTTTTTTCC-TTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAAGCAGAAC
CGTGCCTCTCGCGGAAGCAAAACTGTGCCTCTCGCAAAAGAAAA-AGT--T---AGAAAACAC-GTTTTTC--CCCTTCC
GAAAGAGGCACGTCCGTGCCTCTCGCGAAAGCACAACCGTGCCTCTGGCGGAAGCAAAACCGTGCATCTCGCGAAAGAAA
AAAAA-CAGAAAACGCG----TTTTTCC----CTTTCCGAAAGAGGCACGCCCGTGCCTCTAGCGAAAGCACAACCATAC
CTCTGGCGGAAGCAAAACCGTGCCTCTCGCGAAAG----AAGAAAAA-AAA-CAGAAAACATGTTTTTTTTTCTTTTCCG
AAAGAGGCACGCCCGTG-----------------------CCTCTGGCTGAAGCAAAACCGCGCCTCTCGA---------
-----------------GAAAAA------------------AATGCATTTTTTGA-A--T-TTTTTTTT-----------
-----------TGATTGAAAAGCTAGGGAAGACCGGTAGAAAACCAAAACGTCAAAA--AAACTAAAAAAAA-A-CC-TT
TTAAAAAGCCGAAAACGCGTGTGTAAAAATAAA---AAAAA--TAAAATCCGGAGGGAGCGCCCAGAACGCGACACGTGG
CGAATGACTGTGAGCGCGCCAAGTGACGCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTTGTTAATTAGTTGCTCCC---
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>chr6A_827
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-CTCGGCTCAGACGGAAGGAAGGGCCACCGCCCACGACGGAAGGAAGGGCCTGTATGGTTATCCATTAGAAGCCCAGTAT
GGCCCATCGAACCAAAACCACAATTTCAGCCATAATATAGGCCCCTTGAAGGCCAGAGACAGCAAACCCCTCCATCGCTG
AAACCCTCCAAACGCTTGCCGCAATGGGCAGGAAACCCTCGGCTTCCGCCGCCGCCGC---------------CGCTGCG
GCTGCGGACCACGATTCCACCGTCGCCAGCGCCAAGGCCGCCGAGCTCCTAGCAGCAGCCGCTGACTGCGAGGGTATCCA
TGGGCACTCCATGTTCTTCGACGCCCTCGTGCAGCTTATACCCCCGCGCTTCTACCTCTCCGCCGACGATGATGTTCGCC
CCTACTACCAGGGCCTCTCCAAGGCCGCCAAGGCGGCCATGAAGGCTCAGTCCCGCGCCAATATCAAGGCTGCCCGCCGA
GCCCGCCTCGACCCGGCGGGGCCGCCTTCCTCCACCCTGGACCTTCTCAAGAAGTCCGTCGCCGACCAAGAGGCGGAGGA
GAAGAAGGAAGAGGAGGAGGATAACTCACAAGACGGAAGCCAGGAGTCCGACGACGAGGCAACCTCAGAGGGCGGCGACG
ATGACCAGGACAACGAGGAGGGAGATGAAGAGGAGGAAGAGGAGGAGGAGGCAGAGGATGAGAAGCAGGAGATGCAGATG
GCCCCGGCAGCAGTTGTCTCTGAAGATCGGTCGGTGACTTACGAGGAGCTGCGAGAGCGGCTTCAACGCCGCATTACAGA
GCTCCGTGGGAACCGGTGCACCAGGCCGGAGTTCCTGAATAAGCCCCAGAAGGAGAAGGGTAAGAAGGGAAAGGGTGCTA
AAGTGAAGGGGAAGGAAGAGGGTACAAAGCGGAAGCGTGAGGATGGCACTGGGGATGCAGAGGGTAAGGATGGGAAGAAG
CACAAGAAGGAAGGGGAAGAGAAGGCACCAGATATCATGTATGGCAATGTGTTGGTTGATCCAAAGGAAGCAAGGCGGAG
GAAGAAGAGGAGGATCAAGAACAAGAAGAAGGAGCTGGAGCAGGCTAAGCGGATGCAGCGGGCAAAGGAGGATCCTAAAA
AGGCCACCAAGATGGCCTGGGATGTGGCAACAAGGCGCGCGGCTGGGGAGAAGGTGCACGACAACCCCAAGTTGATTAAA
GAGAGCATGAAGAAGGATAAGAAGCGGCAGGAGAAGCATGCGGAGGAGTGGAAGGACAGGCAGAGGACAGTGGACATCAA
GAAGAAGCAGAAGCAGAATAAGCGGAAGGAGAACATCCAGGGCCGGGCGCAGGAGAAGAAGGCACGCAAAATAGAGAAGC
GCGAGAAGAAGCTTATGCGCCCTGGTTTTGAGGGGCGCAAGGAAGGCTATGTCAACGAGTGACATCTGCATTGAAGATGA
TGATGACTGAGTACTGTCTCTGCTTTATGTTTTCAAGGTTGCATA------TGTTGGTGTTGGTACTGGAAATAGGTATC
CAGATTATGACTACCATACTTAATTATAGCTTGAAGATCGAATGTTTGGCAGGTCATCTGGAAAAGATTTTGAGATATTC
CTTCTGCTGTATTTTCATTGAGCTTAGATAAATTTGTCGAAAAACAAACTTTCATGTCTGGCTTCATAATTATCTCTAGC
ACTAGACCAAGGAAATATTAATGTTCTTTTATGCTGCCT----GAGGAAATGTTAATGATGCTTCAATGGATTTCGTTCT
TTTCTTTGTAATTTGTAGCAGTGGCCTTATAGATTAGTTATGTCAAATTATGCATCAGTGAAGATGTTCTGGGTACAGGC
TTATCTAAATTCTTCTTTGCTTGGTAAATTGGAATCCACAATGCCCACTTCTCATCATGTTATGCATATGCTACATGTCA
ATAGTCTATATCAATCTTATTTTGCAAGCTTATACTGTAGTAATCTACAGTCTGTATTATGGCGTTGAGTTATACTGCAG
GACGCTGATTTGTTAGTTTACTCTCTGCAGTTATATCCTAGATTAATTTGCAGCCTTATTAGTAAGGCCACATGTATACC
TTTGTGTTTATTCATTTGTGTCCACTGTTGTCAAGGGTGAGGTACTTGTTCCCTTCCATTTTCTTGCCAGCAAGGGGACA
GACAACACCTGCATCTATATAAAAAGGGGGATTTTCAGCCTGTCTTGTATGTG-----------------------TACC
-TGCTCGAGAAAGGGCAAAAAAGCAAAAGGTATCATTTATATAGGTACTTGGAATGCAAGGTTAGGATCATCTCTCTCCA
CAAGATATTCTTTCTGTTCGGCGACAAGTTTGAGAGATTTATATGAATCATAGCGGATTTAGGAGGATTGATGGAATGTA
GATGCGCCTT-----------------
>chr6D_874
TAGTTAG-------------------------------------------------------------------------
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-------------------------------------------------------------TCCATTAGAAGCCCAGTAT
GGCCCATCGAACCAAAACCACAATTGCAGCCATAATATAGGCCCCTTGAAGGCCAGAGACAGCAAACCCCTCTATCGCTG
AAACCCTCCAAACGCTTACCGCAATGGGCAGGAAACCCTCGGCTTCCGCCGCCGCCGCCGCTGCCGCCGCTGCCGCTGCG
GCTGCCGACCACGACTCCACCGTTGCCAGCGCCAAGGCCGCCGAACTCCTAGCAGCAGCCGCTGACTGCGAGGGTATCCA
TGGGCACTCCATGTTCTTCGACGCCCTTGTGCAGCTTATACCCCCGCGTTTCTACCTCTCCGCCGACGATGATGTTCGCC
CCTACTACCAGGGGCTCTCCAAGGCCGCCAAGGCGGCCATGAAGGCTCAGTCCCGCGCCAATATCAAGGCTGCCCGCCGA
GCCCGCCTCGACCCCGCGGGGCCGCCTTCCTCCACCCTGGACCTTCTCAAGAAGTCCGTCGCCGACCAAGAGGCGGAGGA
GAAGAAGGAAGAGGAGGAGGATAACTCACAAGACGGAAGCCAGGAGTCCGACGACGATGCAACCTCAGAGGGTGGCGACG
ATGACCAGGACAACGAGGAGGGAGATGAAGAGGAGGAAGAGG---AGGAGGCAGAGGATGAGAAGGAGGAGATGCAGATG
GCCCCAGCAGCAGTTGTTTCTGAAGACCGGTCGGTGACTTACGAGGAGCTGCGAGAGCGGCTTCAGCGCCGCATTACAGA
GCTCCGTGGGAACCGGTGCACCAGGCCAGAGTTCCTGAATAAACCCCAGAAGGAGAAGGGTAAGAAGGGAAAGGGTGCTA
AAGTGAAGGGGAAGGAGGAAGGTACAAAGCGGAAGCGTGAGGATGGCACCGGGGATGCGGAGGGTAAGGATGGGAAGAAG
CACAAGAAGGAAGGGGAAGAGAAGGCACCAGATATCATATATGGCAATGTGTTGGTTGATCCAAAGGAAGCTAGGCGGAG
GAAGAAGAGGAGGATCAAGAACAAGAAGAAGGAGCTGGAACAGGCTAAGCGGATGCAGAGGGCAAAGGAGGATCCTAAAA
AGGCCACCAAGATGGCCTGGGATGTGGCAACAAGGCGCGCGGCTGGGGAGAAGGTGCACGACAACCCCAAGTTGATTAAA
GAGAGCATGAAGAAGGATAAGAAGCGGCAGGAGAAGCACGCGGAGGAGTGGAAGGACAGGCAGAGGACAGTGGACATCAA
GAAGAAGCAGAAGCAGAATAAGCGGAAGGAGAACATCCAGGGGCGGGCACAGGAGAAGAAGGCGCGCAAAATAGAGAAGC
GTGAGAAGAAGCTTATGCGCCCTGGTTTTGAGGGGCGCAAGGAAGGCTATGTCAATGAGTGACATCTACATTGAAGATGA
TGGTGACTGAGTACTGTATCTGCTTTATCTTTGCAAGGTTGCATATGTTGGTGTTGGTGTTGGTACTGGAAATAGGTATC
CAGATCTTGACTACCACACTTAATTATAGCTTGAAGGTTGAATGTTTGGCAGGTCATCTGGAAAAGATTTTGAGATATTC
CTTCTGCTGTATTTTCATTGAGCTTAGATAAATTTGTCGAAGAAAAAACTTCTGTGTGTGGCTTCATAGTTATCTCTAGC
ACTAGACCAACGAAATATTAATGTTCTTTTATGTCCACAGTCCGAGGAAATGTTAATGATGCTTTAGTGGATTTTGTTCT
TTTCTTTGTTATTCCTAGCAGTGGGCTGATAGATTAGTTATGTCAAATTATGCATCAGTGAAGATGTTCTGGGTACATGC
TTATCTGAATTCTT--------GGTAAATTGAAATCCACAATGCCCACTTCTCATCATGTTACGGATACGCTACATGTCA
ATATTCTATATCAATCTTATTTTGCAAGCT--TACTGTAGTAATGTACAGTCTGTATTATGGCGTTGAGTTATACTGCAG
GACGCTGATTTGTTAGTTTACTCTCTGCAGTTATATCCTAGATTTATTTGCAGCCTTGTTAGTAAGGCCACATGTATACC
TTTGTGTTTATTCATTTGTGTCCACTGTTATCAAGGGTGAGGTACTTGTTCCCTTCCATTTTCTTGCCAGCAAGGGGACA
GACAACACCTGCATCTATATAAAAAAGGGGATTTTCAGCATGTCTTGTATGTGCACATTTCTGTTGTTACATATTTTACC
CTGCTCGACAAAGTGCAAAAAAGCAAAAGGTATCATTTATATAGGTACTTGGAATGCAAGGTTAGGATCATCTCTCTCCA
CAAGATATTTTTTCTGTTTGGCGACAAGTTTGAGAGATTTATATGAATCATGGCGGATGAGAGAGGATTGATGGAATGTA
GATGCGCCTT-----------------
>SNPs
------------------------------------------------------------------------------S-
----------------------S---------------------------------------------------------
----------------------S------------------------S--S-------S---------------------
-------------S-----------------------------------S------------------------------
-----------------------------S---S---------------------S------------------------
-------S---S------------------------------------S-------------S--------------S--
--------------------------------------------------------------------------------
-----------------------------------------------S-------------------S------------
------------------------------------S--------------------S----------------------
---------S----------------------------------------------------------------------
----------------S-----------------------S-----SS------------------------------SS
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S--------------------------S----------SSS-S-------------S-----------------------
--------S---S---------S---------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----S-----
------------------------------S--------------------------------------------S----
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
----------------------------S---------------------------------------------------
-----------S-S---------------------S-------------------------S------------------
-----------------------------------------------------------------S--------------
------------S--------------------------------S----------------------------------
---------------------------------------------------S----------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S---------S------
----------------------------S------------------S--------------------------------
----------------------------------------------------------------------S----S----
----------------S--------------------S------------------------------------------
----------------------------------------------------------------------------S---
------------------------S--------------------------------------------S----------
-------------------------------------------------------SSSSSSS---------S--------
-----------------------------------------S--------------------S-----------------
--------------------------------------------------------------------S-----------
------------------------------------------S------------------SS-SS-SSSS---------
----------------------------S-------S-------------------------------------------
-----S-------------------------------------------------------------S----------S-
----S-----------------S----------S---------------S------------------------------
----------SSSSSSSSSSSSSSSSS
>forward_917
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-----------------AGGTAGGTGCTCTCGCTGTA-------------------------------------------
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>reverse_1892
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---------------------------------------------------CGGATGCGGAGGGTAAGGAT---------
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>forward_954
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------------------------------------------------------CTCGGCTCACCCCTCAAATT------
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>reverse_2448
--------------------------------------------------------------------------------
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-----------------------------------------------CTGGTGTTGGTGTTGGTACTG------------
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---------------------------
