>input_sequence_57252
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--------------------ATGGAAAAAAACAGAATTGAAACACTGTCATTGAAGTGGCATGGTGGCA---------TG
GAACACATCGAGTTGCTAACAGTGCTAATGCCACCAAGCTCTGTAAAGAATTTAGAGATAAGGGGTTACATGGATGACAT
CTGCCCGCACTGGTTTATGCATATAGGCCAATATCTTCCTAATCTTGTGAGCTTGGAGCTGTGTCATTTTCAATGCAACA
GCCTAC---CAACACTTGTCCAACCACCCAACTTACGCAAGATTGTTCTCCGCCATATGGAAAACCTAGAAAAGTTTAAC
ATA---------------------------------------TTGGCTAAACTTGAGCATCTAGAAATATACGATTGCCC
CAACTTGAGGTTTAAACTGTGTCTGCCTAGAGCAGTGTACTGGTATATATCCAGGTCTGACAATGTGCTAT---CATGGG
GACAGTGTGCCTGGAACACAG---------CCTCATCTTGTCCTGTGAGTGAACTTAAAGTTGA---CTCAGAGTTGCCT
TTGTGTCATTGGAGTTTGCTTCACCAGCTACGTGGTCTTCGTGATTTAGCTATCTACGGTTGCAAGGATCTGACCATCCC
ATCATGGAGGACCCGATCCTTCACCTCCCTCGAATCACTGTTGTTATATGGATATCATATTCATAAATTGCCAGAATGGT
TGGGTGAGCTCACTTCTCTTCGGCGACTGAATTTATGCCTGGGCA---ACCTACAGGAATTGCATAAGAACATGAGGCAA
CTTACACAGCTGCAATCGCTCAGTCTAGAGAAGTGCAATAAGTTGACATCACTACCGCAATGGTTAGGAGAACTCACCTT
GCTCAAGACACTTAAGCTCTATGGTTGCAATGGCATCATTTCTTTACCGGAGAGCGCAATCACCAACCTCCAAGAACTTC
GTATTTCTGTTTGCCATGTATTATTTGAATGGTGTAAGTTAGAGAAGAACAAGATGAAACTAGCTCACATCAAAGAAAAG
GTATTTGTTCT--AAACCGCTCGTATGTTTTAGTGACC-AGTAGTTTTGTATAAACTTT---------CACATGTACATG
GCCTCGTAAGTGCTGTTTGTTGTCTAATGATACCTTCTGC--ATTCGAAGGATAATAAATGCAACAAAGTTAACTCGGAG
GTAAACCGTATTAATAGCTCTGTTAGACAATATGGTAGTATTTGACAAGAAAACTATATCTACTTCCTTGCAGTCCTACT
CAGACAGCGGCCAGGAGGGATGTGAGGAGGATCTAGGATGA---------------------------------------
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--------------------------
>chr1D_1_TraesCS1D01G419600
TTTTGAATTTACCTTTCCTGCTTAGTTGTTAATGAAATCT----------------------------------------
---------------ATACTATTAATGCAGACTAGTTACTATTCATTGTTCATGAAGCCTGACAATTTCTTGATCATGCA
TGACCTGGCGCATGATCTTGCAAGATCAGTTCTGGCTAATGAAATTAACATAGAGAGTCCTTCCTGCCGATATGCATGGC
TGACAGATCATAGAAAGCTATTTAAGTCATCAATGAATCCACTTGCTAAGTTATTTAAGTCA------------------
------------------------------------------------TCAATGGATCCACTCACCAAGATAAGGGCACT
GCATTTTATCGACCGTGGCTCCTTGCAGCTTCATGCTGAAGCATTATCAGGAGCTAAATGCCTATGTGTCTTGGATTTAA
GCAAATGTTGTGC---------------------------------------------------------ACAAGAGTTA
CCTGATTCTATTGGTCAACTAAAACAGTTGAGGTATCTCGATGCTTCAT---------GGAACGTCGATGTACCTGAACC
TCCTGAATACCCAGATCCGCCGGAGTCTACAATGATACCGAAAGCTCTGGGTTCCCTTAACAAACTCCAATATTTGAATT
TATCATTCCGCCGAAGACCCATAGGGCTGCCAGAGGTCATCAGCAAACTCACGGAACTCAGGTATTTGAATACATCATTT
TGTGAGGGTTATTATTTATTGGACAGCCCATCAGCAAACCAAAGTTTCATTGACTGTATCGGTACCCTTCCCAATCTGGA
GCAGCTGGACATGTCTTGGAATGACTATGTTTTTTGTGTGCCTGAAAGTTTTAGCAGACTAAAGTAGCTGAACCTCTCCG
GCTGCAATCAGATTTCTAGCCTTCCAGAAAATGTGGGGAAAGTGGATATTCCGAGGCTTTTTGGCTTGTTGGACCACCCA
CTGGAAAATGAT---GGGTTTCACGTG--------------------------CGTCCGGTTGATAGTGGATCTGGCAGC
AG---TCTTGTCTGGCTTAAGCATACAAATCCTGATGTGTTGTGTATCGACGAT-CTTCAAAATGTGAAGTCTGTAGAAG
AGGCACGCAGTATAAGGTTGATGGAAAAAAACAGAATTGAAACACTGTCATTGAAGTGGCATGGTGGCA---------TG
GAACACATCGAGTTGCTAACAGTGCTAATGCCACCAAGCTCTGTAAAGAATTTAGAGATAAGGGGTTACATGGATGACAT
CTGCCCGCACTGGTTTATGCATATAGGCCAATATCTTCCTAATCTTGTGAGCTTGGAGCTGTGTCATTTTCAATGCAACA
GCCTAC---CAACACTTGTCCAACCACCCAACTTACGCAAGATTGTTCTCCGCCATATGGAAAACCTAGAAAAGTTTAAC
ATA---------------------------------------TTGGCTAAACTTGAGCATCTAGAAATATACGATTGCCC
CAACTTGAGGTTTAAACTGTGTCTGCCTAGAGCAGTGTACTGGTATATATCCAGGTCTGACAATGTGCTAT---CATGGG
GACAGTGTGCCTGGAACACAG---------CCTCATCTTGTCCTGTGAGTGAACTTAAAGTTGA---CTCAGAGTTGCCT
TTGTGTCATTGGAGTTTGCTTCACCAGCTACGTGGTCTTCGTGATTTAGCTATCTACGGTTGCAAGGATCTGACCATCCC
ATCATGGAGGACCCGATCCTTCACCTCCCTCGAATCACTGTTGTTATATGGATATCATATTCATAAATTGCCAGAATGGT
TGGGTGAGCTCACTTCTCTTCGGCGACTGAATTTATGCCTGGGCA---ACCTACAGGAATTGCATAAGAACATGAGGCAA
CTTACACAGCTGCAATCGCTCAGTCTAGAGAAGTGCAATAAGTTGACATCACTACCGCAATGGTTAGGAGAACTCACCTT
GCTCAAGACACTTAAGCTCTATGGTTGCAATGGCATCATTTCTTTACCGGAGAGCGCAATCACCAACCTCCAAGAACTTC
GTATTTCTGTTTGCCATGTATTATTTGAATGGTGTAAGTTAGAGAAGAACAAGATGAAACTAGCTCACATCAAAGAAAAG
GTATTTGTTCT--AAACCGCTCGTATGTTTTAGTGACC-AGTAGTTTTGTATAAACTTT---------CACATGTACATG
GCCTCGTAAGTGCTGTTTGTTGTCTAATGATACCTTCTGC--ATTCGAAGGATAATAAATGCAACAAAGTTAACTCGGAG
GTAAACCGTATTAATAGCTCTGTTAGACAATATGGTAGTATTTGACAAGAAAACTATATCTACTTCCTTGCAGTCCTACT
CAGACAGCGGCCAGGAGGGATGTGAGGAGGATCTAGGATGA------------GTTTCAAAATCTTGTGGATGCGATCTG
GGTGGCATGTTGATGA------------TCCTTGGAGCTCTTCTGATGCCACAAGTGGAGACCTTCACTTAGGATCACAA
GGCTTTGGTGATCTTCATTCACATGTTTTGTTGCCTTTACATGCTGTGAGTGGAAGGTTAACCTGCTGCTGTACAGTGGT
ACTAATCTGTGATTTCTTCGTATCTATCTACCTGATGAATTCTAGTCATTTGCCATGGTCCCTGCTGTTATCTAT----G
GATGGAAGCTTAACTTGCTGGTGGACAATAATATGATGATCTTGCTCTGGAAATCGAGATAAAACTGACGCAAACAATTC
AGTTTCATTCCTATACTCCCTAACCAACGAGTGCTCAGCTGATG------------------------------------
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-------------------------------CCTCCGTTTCATATTAGTTGTGTTTGTACTAAATTAGCGACTAACTAAT
ATGGA-ATCGAGAGAATATGCATTGGAAAATGTATTAATGATATTGCTTGATTTGTCTTGCAAAATCCTTTCATTTCATA
TATCTTCATACTAATTGTGTAAATATATTGTAAGTACAAATCATAGTCAAATTTGTAAATCATTGACCAGTGAAATTTAA
GGACACCTTATATTTTGGGACAGCGGGAGTATTTTAGACAGATGAATAATATTTGCTCCTTGTCTCATCTTTATCCCCGC
GAGGGCAGATCTAGATCTTGCACCCAAATTTAATTAAAGCTCCTGATGGGGAAAAAAGAGTTAAGTTACT--CCCGTATG
CTGGAACCCATTGGGATGCGTGAAACATATTCAGTTCATAACAG---TAAGGGCTAGAAAACTGAATCAATTGCACCAGA
ATTATGTCAATCTTCTGAGCGGACATCATAAATATTGGACTGTCCATGCACCAAAAGCAACACTAGCGATTCCATGGCAA
TGCAAATGCCTAGCGAGCAGCTGCACTACTAGCACCGCATGTAGTGGAAATGCTTATATATACA----ACCTGACACTTG
CAATTTGCAAAGAACTCATCTATCTT
>chr1B_1
TTTTCAATTTACCTTTCCTGCTTAGTTGTTAATGAAATCTATTAAATACGTGATAACATGAAGGCTGTTTCGAATTCTGA
AGTCTGATAGTGTGTATACTATTAATGCAGACTAGTTTCTCTTCATTGTTCATGAAGCCTGACAAGTTCTTGATCATGCA
TGACCTGGTGCATGATTTCGCAAGATCAGTTCTGGCTAATGAAATTAACATAGAGAGTCCTTCCTACCGATATGCATGGC
TGACAGATCATAGAAAGCTATTCAAGTCATCAATGGATCCACTTGCCAATTTATTTAAGTCA------------------
------------------------------------------------TCAGTGGATCCACTCACCAAGATAAGGGCACT
GCATTTTATCGACCGTGGCTACTTGAAGCTTCATGCTGAAGCATTATCAGGAGCTAAATGCCTATGTGTCTTGGATTTAA
GCAGATGTTTTGTACTCCCTCCGTAAACTAAAGTGATCTAAACGCTCTTATATTAGTTTACGGAGGGAGTACAAGAGTTG
CCTGATTCTATTGGTCAACTAAAACAGTTGAGGTATCTCGATGCTTCAT---------GGAACCTCGATGTTACTGAATC
TTCTGAATACCAAGATCCGCCAGAGTCTATAATGATACTGAAAGCTCTGGGTTCCCTTAACAAACTCCAATATTTGAATT
TATCATTCCGCCAAAGATCCATAGGGCTGCCAGAGGTCATCAGCAAACTCACGGAACTCAGGTATTTGAATACATCATTT
TGTGAGGGTTATTATTTATTGGACAGCCCATCAGCAAACCAAAGTTTCATTGACTGTATCGGCACCCTTCCCAATCTGGA
GTAGCTGGACATGTCTTGGAATGGCTATGTTTTTTGTGTGCCTGAAAGTTTTAGCAGACTAAAGAGGCTGAACCTCTCCG
GCTGCAATCAGATTTCTAGCCTTCCAGAAAATGTGGGGAAAGTGGATATTCCAAG-------------------------
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--------------------------------------------------------------------------TTTAAC
ATA---------------------------------------TTGGCTAAACTTGAGCATCTGGAAATATACGATTGCCC
CAACTTGAGGTTTAAACTGAGTCTGCCTAGAGCAGTGTACTGGTATATACACAGGTCTGACAATGTGCTAT---CATGGG
GACAGTGTGCCTGGAACACAGCTGCTTCCTCCTCATCTTGTCCTGTGAGTCAACTTAAAGTTGA---CTCAGAGTTGCCT
TTGTGCCATTGGAGTTTGCTTCACCAGCTACCTGGTCTTCGCGATTTAGCTATCTACTGTTGCAAGGATCTGACCATCCC
ATCATGGAGGACCCGATCCTTCACCTCCCTCGAATCACTGTTGCTATATGGATATCATATTCATAAATTGCCAGATTGGT
TGGGTGAGCTCACTTCTCTTCGGCGCCTGGATTTATGCCTGGGCA---ACCTACAGGAATTGCATAAGAACATGAGGCAA
CTTACACAGCTGCAATCGCTCAGTCTGGACCACTGCAATAAGTTGACATCACTACCGCAATGGTTAGGAGAACTCACCTT
GCTCAAGACACTTAAGCTCTATGGTTGCAATGGCATCATTTCTTTACCGGAGAGCGCAATCACCAACCTCCAAG------
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--------------------------
>chrUn_92
--------------------------------------------------------------------------------
------------------------------------------------------------------TTCTTGATCATGCA
TGACCTGGTGCACGATCTCGCAAGATCATTTCTGGCTGATAAAATTATTGTAGAGAGTCCTGCCTGCCAATATGCATGGC
TGACAGATCATAGAAAGCTATTCAAGTCATCAATGAATCCACTCA---------------------------------CC
AAGCTATTTATGTCATCAATGAATCCACTTGCCAAGCTATTTAAGTCATCAGTGACTCCACTCGCCAAGATAAGGGCACT
GCATTTTCTCGACCGTGCTTACTTGCAGCTTAATGGTGAAGCTTTTTCACCGGCTAAATGCCTCCTTGTCCTGGATTTAA
GCAGATGTTGTGC---------------------------------------------------------ACAAAAGCTG
CCTGATTCTATGGGTCAACTGAGACAGTTGAGGTATCTCGATGTTTCAT---------GGAACCCCGAGTTTACTGAATC
TTCTGAATACCAAGCATCACCGGAGTCTATATTGATACCGAAAGCCCTGGGTTCCCTTAATGAACTCCAATATTTGAATT
TATCAGGTCGCGGAAGACCCATAGGGCTGCCAGAGGTCATCAGCAAACTCACGGAACTCCGGTATTTGAATATATCTCAT
TGCAAGGGTTATTATTTATTGGACATCCCATCAGCAAACCAAAGTTTCATTGACTGTATCGGTACCCTTCCTAATCTGGA
GCAGCTGGACATGTCTTTTAATAACTATGGTTTCTGTGTACCTGAAAGTTTCAGCAGGCTCAAGAAGCTGAACCTCTCCG
GCTGCCAGTACATTGCTAGCCTTCCAGAAAATGTGGGGAAAGTGGATATTCCAAGGCTTTTTGGCTTGTTGTTCCCGC--
----AAAAGGGA---GGGTTTCCTGTG--------------------------CGTGTGGTTGATAGTGAATCTAGCAGC
AG---TCTTGTCTGGCTTAAGCATACAAATCCTGATGTTTTGGGGATCGCCGAT-CTTGAAAATGTGAGGTCCGTGGAAG
AGGCACGCAGTATAAGGTTGATGGAAAAACAGAGAATTAAAGAATTGTCATTGCAGTGGAGCGGAGGTGTGAGTTCTGTG
GAACACATGGAGTTGCTAACAGAGCTAGTGCCACCAAGCTCTGTAAAGAATTTCAAGATAACACGTTACAAGGATGTCAT
GTTTCCGCACTGGTTTATGCATATAAACAAATATCTTCCTAATCTTGTGAGTTTGGAGATGTGGGGTGTGCTTTGCCACA
GCCTACCAACAACACTCGTCCCACTACCCAACCTACGAAAGATTGTTCTCAGCAACATGCATAACCTGGAAGAGTTCAAC
ACAGCATGCTCTATAGGCGAGGATGGTGCAAATGAGCTCACGTTGGCTAAACTTGAGTATCTGG----------------
-------------------------------------------CGTATATCACGTGCTGACAATGTGCTATCGTCATGGG
GAGAGTGTGCGTCAAGCGCAGCTGCTTCCTCCTCATCTTCTTCTGTGAGTAAGCTAGAAGTTGAATACTCTGAGTTGCCT
TTGCACCAGTGGAGATTGCTTCACCACCTACATCGTCTTAGTGATTTAACTATCTCCGATTGCAATGATCTGACCATCTC
ACCACAGATCTCCCGAGCCTTCACCTCCCTTGAATCACTGGAATTTCG------TAGCCTGGAAAAATTGCCAGAGTGGT
TAGGTGAGCTCACATCTCTTCGGCAGCTGAACTTAATATCCATCCGTCACCTACAGGAATTGCATGAGAACATGAGGCAG
CTTAGACAGCTGCAATCGCTCCACCTGCACTTTTGCAATACGTCGACATCACCACCGCAATGGTTAGGAGAACTCACCTT
GCTTAAGACACTTAAAATCACTTATTGCAAGGGCATCATTTCTTTACCGGAGAGCATACTCACCAACCTCCAAGAACTTT
ATATTTCGAACTGCCCTGAATTATATAGATGGTGTAAGTTAGAAGAGAACCAGATGAAACTAGCTCACATCAAGGAAAAG
GTATATGTACTAAAAATCGCTCGTATGTTTTAGTGAC----TAGTTTTGTATAAAATTTATCATGTTTCACTTGTACATT
GTCTGGTAAGTGTTGTTTGTTGTCTAATCTTGCCTTCTAATTCA---AAGGATAATAAATGCAGCAAAGTTAACTCCGAG
GTAAACCGGAT---TAGCTCTGTTAGACAACATTGTA---TTTGACAA--------------------------------
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--------------------------
>chr6B_92
--------------------------------------------------------------------------------
------------------------------------------------------------------TTCTTGATCATGCA
TGACCTGGTGCACGATCTCGGAAGATCATTTCTGGCTGATAAAATTATTATAGAGAGTCCTGCCTGCCAATATGCATGGC
TGACAGATCATAGA---------------------------------AAGCTATTTAAGTCATCAATGAATCCACTCGCC
AAGCTATTTATGTCATCAATGAATCCACTCGCCAAGCTATTTAAGTCATCAATGACTCCACTCGCCAAGATAAGGGCACT
GCATTTTCTCGACCGTGCTTACTTGCAGCTTAATGGTGAAGCTTTTTCACCGGCTAAATGCCTCCTTGTCTTGGATTTAA
GCAGATGTTGTGC---------------------------------------------------------ACAAAAGCTG
CCTGATTCTATTGGTCAACTGAAACAGTTGAGGTATCTCGATGCTTCAT---------GGAACCCCGAGTTTACTGAATC
TTCTGAATACCAAGCACCACCGGAGTCTTTATTGATACCGAAAGCCCTGGGTTCCCTTAATGAACTCCAATATTTGAATT
TATCAGGTCGCGGAAGACCCATAGGGCTGCCAGAGGTCATCAGCGAACTCACGGACCTCCGGTATTTGAATATATCACAT
TGCATGGGTTATTATTTATTGGACATCCCATCAGCAAACCAAAGTTTCATTGACTGTATCGGTACCCTTCCTAATCTAGA
GCAGCTGGACATGTCTTCTAATAACTATGGTTTCTGTGTACCTGAAAGTTTCAGCAGACTCAAGAAGCTGAACCTCTCCG
ACTGCCAGTACATTGCTAGCCTTCCAGAAAATGTGGGGAAAGTGGATATTCCAATGCTTTTTGGCTTGTTGTTCCCGC--
----AAAAGGGA---GGGTTTCCTGTG--------------------------CGTGTGGTTGATAGTGAATCTAGCAGC
AG---TCTTGTCTGGCTTAAGCATACAAATCCTGATGTGTTGGGTATCACTGATACTTGAAAATGTGAGGTCCGTGGAAG
AGGCACGCAGTATAAGATTGATAGAAAAACAGAGAATTAAAGAATTGTCGTTGCAGTGGAGCGGAGGTGTGAGTTCTGTG
GAACACATGGAGTTGCTAACAGAGCTAGTGCCACCAAGCTCTGTAAAGAATTTCAAGATAACACGTTACAAGGATGTCAT
GTTTCCACACTGGTTTATGCATATAAACAAAGATCTTCCTAATCTTGTGAGTTTGGAGATGTGGGGTGTTCTTTGCCGCA
GCCTACCAACAACACTCGTCCCACTACCCAACCTAAGAAAGATTGTTCTCAGCAACATGCATAACCTGGAAGAGTTCAAC
ACAGCATGCTCTATAGGCGAGGATGGTGCAAATGAGCTCACGTTGGCTAAACTTGAGTATCTGGAAATAGACAATTGCCC
CAAGTTGAGGATTAAACCGTGTCCGCCTAGATCAGTGTACTGGCGTATATCTCGTGCTGACAATGTGCTATTGTCATGGG
GAGAGTGTGCCTCAAGCACAGCTGCTTCCTCCTCATCTTCTTCTGTGAGTAAGCTAGAAGTTGAATACTCTGAGTTGCCT
TTGCACCAGTGGAGATTGCTTCACCACCTACATGGTCTTAGTGATTTAACTATCTCCGATTGCAATGATCTGACCATCTC
ACCACAGATCACCCGAGCGTTCACCTCCCTCGAATCACTGGAATTTCG------TAGCCTGGAAAAATTACCAGAGTGGT
TAGGGGAGCTCACATCTCTTCGGCAGCTTAACTTAATATTCATCCACCACCTACAGGAATTGCATGAGAACACGAGGCAG
CTTAGACAGCTGCAATCGCTCCGCCTGCACTTTTGCAATACGTCGACATCACCACCGCAATGGTTAGGAGAACTCACCTT
GCTCAAGACACTTAAAATCACTTATTGCAAGGGCATCATTTCTTTACCGGAGCGCATACTCACCAACCTCCAAGAACTTT
ATATTTCGAACTGCCCTGAATTATATAGATGGTGTAAGTTAGAAGAGAACCGGATGAAACTAGCTCACATCAAGGAAAAG
GTATATGTCTT--AAATCGCTCGTATGTTTTAGTGAC----TAGTTTTGTATAAAATTTATCATATTTCACTTGTACATT
GCCTGGTAAGTGTTGTTTGTTGTCTAATCTTGCCTTCTAAT-CA---AAGGATGATAAATGCAGCAAAGTTAACTCGGAG
GTAAACTGGAT---TAGCTCTGTTAGACAACATGGTA---TTTGACAAAAAAATACTTTATATA--CTTGCAGTCTATCT
AGGAACATTCGGCTCGAGGCATTTGGGAAACACTTTAATGAGATGATAAGTATGATTTAGCATCTCCTGTATGCGATCCA
GATGGATATTGACGATCGAGGATGGTGGTCCTTGGAGCTCTTCTGACGCCCCAGGTGGAGACCTTCACTTAGAATTACAG
CGCTTTGATGATCTTCAATTGCATGTTTTGTTGCCTTT------------------------------------------
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--------------------------
>chr5D_92
--------------------------------------------------------------------------------
------------------------------------------------------------------TTCTTTATCATGCA
TGACCTGGTGCATGATCTTGCAAGATCAGTCATGGCTGATGAAATTGACATAGATGTTCCTACCTGCCGATATGCATGGC
TGACAGATCAGAGA---------------------------------AAGCTATTTAATTCA------------------
------------------------------------------------GCAGTGATTCCACTCGCCAAGATAAGGGCACT
ACATTTTCATGATCCTGGCAACTTTCAGCTTAATGGTGATGCATTTTCACCAGCCAAATGTCTCCGTGTACTAGATTTAA
GCAGGTACTGCAC---------------------------------------------------------ACAAGAGTTG
CCTGATTCTATTGGTCAACTGAAACAGCTGAGGTATCTTGATGCTTCAT---------GGAAGCTCAATTTTTCGGTAT-
--------------CACCACCAGAATCTATAAGGATACCAAAAGCTCTGGGTGCCCTTACCAAACTCCAATATTTGAATT
TATCACGTCGCAGAGAACTCATAGGCCTGCCAAAGGTCATCAGCAAACTCATGGAGCTCCGGTATTTAAATATATCAACC
TGCACGGGTTATCATTCACTGGGCATCCCTTCAGCAAATCAAACTTTCATTGATTGTATTGGTGCCCTTCCCAATCTGGA
GCAGTTGGACTTGTCTTTGAACAATTATGGTTTTAGTGTACCTGAAAGTTTTAGCAGCCTCAAGAAACTGAACCTCTACG
GCTGCAATCGGATTGCTAGCATTCCAGAAAATGTGGCGAAAGTGGATATTCAGAGGCTTTTTGGCTTGTTGGAACCGGTG
GGAAACGAAAACATCGTGTTTAACGTG--------------------------CGTGAAGGTTATAGTGAATCCAGCAGC
AC---TCTTTTCTTTCTTAATCATACAAATCCTAATGTGTTGCACATCTTCAAT-CTTGAAAATGTGAAGTCAGTAGAAG
AGGCACGCAGTATAAGGTTGATGGAGAAACAGAACATTGAAAGTTTGAGTTTGCTGTGGTGCAGACGTGTGGATTATCTG
AAACACATGGAGTTGCTGACAGAGCTAGTGCCACCAATCAATGTAAAGCATTTGAGGATAATAGGTTACGTGGATGCCAT
CTTTCCATACTGGGTAATGGATATAAGCAAATATCTTCCTAATCTTGTGAGCCTGGAGATGTCGCATTCGCCATGCAGCA
GCCTAC---CACCACTTGTCCAACTACCCAACCTACGCGAGATTATTCTCGGCAATATGAGTAACCTGCAAGAATTTAAC
A-------------------------------------------------------------------------------
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--------------------------
>chr5B_92
--------------------------------------------------------------------------------
------------------------------------------------------------------TTCTTGGTCATGCA
TGACCTGGTACATGATCTCGCAGGATCTGTTCTGGCCGATGAAATTGGTATAGAGGGTCCAACCTGCCGATATGCATGGC
TGACAGATCACAGA---------------------------------AAGCTATTCAAGTCA------------------
------------------------------------------------TCAATGACTCCACTCGCCAAGATAAGGGCACT
GCATTTTCATGATCGTAGCAACTCTCAGCTTGATCGTGAAGCATTTTCACCAGCTAAATGCCTCCGTGTTTTAGATTTAA
GCAGATATTGTAC---------------------------------------------------------GCAAGAGTTG
CCTGATTCTATTGGTCAACTAAAACAGTTGAGGTATCTCGATGCTTCTTCATGGGGCCGGAAGCTCCAACGGTG------
---------------------GGAGTCTACAAGGATACCAAAAGCTCTGGGTGCCCTTAACAAACTCCAGTATTTGAATT
TATCACGTCGCGGAAGACTCTTAGGACTGCCAAAGGTCATGAGCAATCTCATGGAACTCCGGTATTTAAATATCTCACAC
TGTCACGGTTATTATTTATCAGACAGCCCATCGGCAAATCAAAGTTTCATTGCCTGTATCGGTACCCTTCCCGATCT---
----------------TGGAATGACTATTGTTTTTGTGTGCCTGAAAGTTTTAGCAGCCTCAACAAATTGAACCTCCGCG
GCTGCATGCACATTGCTAGCCTGCCAGAAAATGTGGCCAAATTGGATATCCTGAGCCTTTTTGGATTGTTGCAACAC---
---------GGG---GAGTTTCCTGTGCGTGCAGATTTTTTTTTTTGTGAGGACGTGCAGATGATGGTGAATCTAGCAGC
AGCAATCTTGCCTTTCTTAAGCATGCAAATCCTCAAGTGTTGAGCATCAAAGAT-CTTGTAAATGTGAAGTCTGTAGAGG
AGGCACGCAGCATAAGGTTGATGGAAAAACAGAGCATCGAAGAATTGACATTGTGGTGGGGCGAAGGCGCGAGTTCTGTG
GAACACATGGCGCTGCTCAAAGAGCTAGTGCCACCAACAACTGTGCAGACTTTGAATATATTTGGTTACAAGGGTGTCAT
ATTTCCATACTGGGTTATGCAGATAAGCAAATATCTTCCTAATCTTGTGAGCTTGAGGTTGTGGAATCTGCTGTGCAGCA
GCCTAC---CAACGCTCGTCCAACTACCCAACCTACACAAGATTTTTCT-------------------------------
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--------------------------
>chr5D_233
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AAGCTATTCAAGTCA------------------
------------------------------------------------TCAATGACCCCACTCGCCAAGATAAGGGCACT
GCATTTTCATGATCGTAGCAACTATCAGCTTGATCGTGATGCATTTTCACCAGCTAAATGCCTCCGTGTTTTAGATTTAA
GCAGATATTGTAC---------------------------------------------------------GCAAGAGTTG
CCTGATTCTATTGGTCAGCTGAAACAGTTGAGGTATCTCGATGCTTCTTCATGGAGCCGGAAGCGCGAACGGTG------
---------------------GGAGTCTACAAGGATACCAAAAGCTCTGGGTGCCCTTAACAAACTGCAGTATTTGAATT
TATCACGACGTGGCAGGCTCGTAGGACTGCCAAAGGTCATGAGCAATCTCATGGAACTCCGGTATCTAAATATATCACAC
TGCCACGGTTATTATTTATCAGACAGCCCATCGGCAAATCAAAGTTTCATTGACTGTATCGGTACCCTTCCCAATCTGGA
GCAGCTGGACCTGTCTTGGAATGACTATTGTTTTTGTGTACCTGAAAGTTTTAGCAGCCTCAACAAACTGAACCTCCGCG
GCTGCATGCACATTGCTAGCCTTCCAGAAAATGTGGCCAAATTGGATATCCTCAGGCTTTTTGGATTGTTGCAATAC---
---------GGG---GGGTTTCCTGTG--------------------------CGTGCAGATGATAGTGAATCTAGCAGC
AGCAATCTTGTCTTTCTTAAGCATGCAAATCCTCAAGTGTTGAGTATCAAAGAT-CTTGTAAATGTGAAGTCTGTAGAAG
AGGCATGCTGTATAAGGTTGATGGAAAAACAGAGCATCGAAGAATTGACATTGCGGTGGGGCGAAGGCGCGAGTTCTGTG
GAACACATGGCGCTGCTAAAAGAGCTAGTGCCACCAACAAGTGTACAGAATTTGAATATATTTGGCTACAAGGGTGTCAT
ATTTCCATACTGGGTTATGCATATAAGCAAATATCTTCCTAATCTTGTGAGCTTGAGGTTGTGGAGTCTGTCGTGCAGCG
GCCTAC---CAACACTCGTCCAACTACCCAACCTACGCAAGATTTTTCTTGGCTACATGTATAACCTGGAAGAATTTA--
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>chr5D_233
--------------------------------------------------------------------------------
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-----------------------------------------------AAGCTATTTAATTCA------------------
------------------------------------------------TCAGAGACTCCACTCTCGAAGATAAGGGCACT
GCATTTTCATGATCCTGGCGACTTTCAGCTTCATGGTGA---TTTTTCACCAGCTAAATGCCTCCGTGTCTTAGATTTAA
GAAGATGGTGTAC---------------------------------------------------------ACGAGAGTTG
CCCGATTCTATTGGTCAACTGAGACAGTTGAGGTATCTCGATGCTTCAT---------GGTATTTCAGGT----------
-----------------CGCTGGAGTCTATAAGGATTCCCAAAGCTCTGGGTGCCCTTACCAAACTCCAATACTTGAATT
TATCAGATCGCGGAACACCCATAGGGTTGCCAGAGGTCATCAGCAAACTCACGGAACTCCGGTACTTAAATATATCGTCC
TGCAGGGGTTATTATTCATTGGACAACCCGTCAGCGAATCAAAGTTTCATAGACTGTATCGGTACTCTTCCCAATCTGGA
GCACTTGGACTTGTCTCGCAATGACTATGGTTTTAGTGTACCTGAAAGTTTTAGCAGCCTCAAAAAACTAAACCTTGAAA
AATGCACGCGCATTTCTAGCCTTCCAGAAAATGTGGGGAAACTGGATATTCAGAACCTTTTTGGCTTGTTGAAACTGGGA
AGACA------A---GGGTTTTATGTG--------------------------CGTGCCGATGACAGTGAATCCAGCAGC
AG---TCTTGTCTGGCTTAAGCATACAAATCCTGATGAGTTGAGTATCGTCGGT-CTTGAAAATGTGAAGTCCGTAGAAG
AGGCACGCATTATAAGGTTGATGGAGAAACACAATATTGAAAAACTGACATTGAACTGGAGGGAAGGTGTTAGTTCTGTG
GGACACATGGTGTTGCTAACAGAGCTAGTGCCACCACCCAGTGTAAAGGATTTGATGATAGTAGGTTACAAGGGTGTCAT
CTTTCCACACTGGTTAATGCCTATGAGCAGATATCTTCCTAATCTTGTGAGTTTGGTGTTGTGGAATCTGCCATGCAGAA
GCCTAC---CAAGATTCGCCCAACTACCCAACCTACGGAGTATTGTTCTCGGCAACATGTATAACCTGAAAGAATTTGAC
ACATCATGCCCTATGGGTGAGGACGGTGCGAATGAGTTCACGTTGCCTAAACTGGAGTATTTGAAACTGGACAACTGCCC
CAAGTTGATGATTAAGCGATGTCCGCCTAGAGCTGTGTTCATGTTTATATCAAGAGGTAAAAATGTGCTATCGTCATGCG
GAAATTGTGCCGCAAGCACAGTTGCTTCCTCCTCTTCCCCTCCTGTGAGTAAACTGAAAGTTGAATACTCGGAGTTGCCT
TTGCGGCAGTGGAGATTGCTTCACCACCTTCCTGGCCTTAGTGACGTAAGTATCACCCATTGCGATGATCTGACTATCTC
ACCACAGATCAGCCAAGCCTTCGTCTCCCTTGAATCACTCTCCCTAGAATCCATTAGCCTGAAATGTTTGCCAGAATGGG
TCGGTGAACTCCCATCTCTTCGGCAGTTGAGCTTAATATACATGAACTGCCTACAGGAATTGGACAAGAACCTGAAGCAA
CTTACACAGTTGCAATCGCTGAGTCTGGATATGTGCAATGCATTGACATCACTACCGCAATGGTTAGGAGAACTCACCTT
GCTCAAGACGCTTAAGATCAGAACTTGTGAGAGCATCACCTCTTTACCGGAGAGCATACTCACCAACCTCCAAGAACTAC
GTATTCAGTGCTGCCCTCAACTAGATGAATGGTGTAAGTTGAAGGAGAATCAGATGAAACTAGCTCACATCAAGGAAATG
GTAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1B_1861
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---------------------------------------------------------------------CCAAGAACTTC
GTATTTCTGTTTGCCATGTATTATTTGAATGGTGCAAGTTAGAGAAGAACAAGATGAAACTAGCTCACATCAAAGAAAAT
GTATTTGTTCT--AAATCGCTCTTATGTTTTAGTGACCAAGTAGTTTTGTATAAACTTC---------CACATGTACATG
GCCTCCTAAGTGCTGTTTGTTGCCTAATGATACCTTGTGCTAATTCGAAGGATAATAAATGCAACAAAGTTAACTCGGAG
GTAAACCGTATTAATAGCTCTGTTAGACAATATGGTAGTATTTGACAAGAAAACTATGTCTACTTCCTTGCAGTCCTACT
CAGACAGCGGCCAGGAGGGATGTGAGGAGGATCTAGGATGA------------GTTCCAAAATCTTGTGGATGCGATCTG
GGTGGCATGTTGATGA------------TCCTTGCAGCTCTTCTGACGCCACAGGTGGAGACCTTCC--TAGGATCACAA
GGCTTTGGTGATCTTCATTCACATGTTTTGTTGCCT----------------------------GCTGCTGCACAGTGGT
ACTAATCTATGATATCTTCGTATCTATCTACCTGATGAATTCTAGTCATTTGCCATGGTCCCTGTTGTTATCTATCGATG
GATGGAAGCTTAACTTGCTGGTGGACAATAATATGATGACC-TGCTCTGGAAATCGAGATAAAACTGACGCAAACAATTC
CTGTTCATTCCTGTACTCCCTAACCAACGAGAGCTCAGCTGATGCCTTGTGCGACTCCATGGACAGCCGCGTCGGTGCTT
CATTTTGAACAAGTTACTCTGTTTTGATCCTAGAATTTCTCATTGGATTCTTTCACGTTGTGCCTAGTGGCCTCACCAAT
TGCAGAGGCCGCCGTCCGACCGTCGACACTAGCTACCGGCATGTCCATCCGCGATGCAGTGCAGAATCGCCTCAACTTTC
TGCTAAAAAGTCCATATTTACAGTGCAGAGATGCTTTAGGCATTGCAGGCTTGCAGGCAATTCCAACAAGGCTTTTTCAT
CTCACAAATGGAAACAAAATCATTTTCGGCTTTGATGATATTGTTGATGCGCGACTATTTTTATGCTGGTCTTTGATGCA
CAACTACTTTGACCACTAATATTTATTGCTCCCTCCGTTTCATATTAGTTGTCTTTGTACTAAATTAGCGCCTAACAAAA
AAAAGGATGGAGAGTATATGCATTGGAAA-TGTATAAACGATATTGTTTGACTTGTCTTGCAAAATCCTTTCATTTCATA
TATCTTCATACTAATCGTGTAAATATATTGTAAGTACAAATCATAGTCAAATTTGTAAATCGTTGACCAGTGAAATTTAA
GGACACCTTATATTTTGGGACAGCGGGAGTATTTTATACAGATAAATAATATTTGCTCCTTGTCTCATCTTTATCCCCGC
GAGGGCAGATCTAGATCTTGCACCCAAATTTAATTAAAGCTCCTGATGGGGAAAAGGAAAGTTTAGTTACCCCCCGTATG
CTGGAACCCGTCGGGATGCGTGAAACATGTTCAGTTCATATCAGTAATAAGGGCTAGAAAACTGAACCAATTGCACCAGA
ATTATGTCAATCTTCAGAGCGGACATCATAAATATTGGACTGCCCATGCACCAAAAGCAACACTAGCGATTCCATGGCAA
TGCAAATGCCTAGCGAGCAGCTGCGCTACTAGCATCGCATGTAATGGAAATGCTTATATATACAACGTACCTGACACTTG
CAATTTGCAAAAAA------------
>SNPs
----S---------------------------------------------------------------------------
-------------------------------------S--S------------------------S--------------
--------S-----------------------------------------------------------------------
----------------------S-----------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
---S---------------------------------------------------------------------------S
---------------------------------------------------------------S-------SS-----S-
-S---------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
------------------------------------------------------------------------------S-
SSSS----S--S--------------------------------------------S------------S----S-----
------------------------------------------S---------------S---------------------
-----------------------------S------------S----------------SSS--S---S-----------
--------S-------------S----S-------------------------SS------SS-------------S---
--SS---------------------S--S-----------------------------S----S-------S--------
------------------------S-------S-----------------S--S-----S-S-----S---S--------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-----S-------------------------S------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------S--S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
----------------------------------------------S------S--------------------------
--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS-------S--------
--------S----S--------------------------------------------------S---------------
---------------------------------------S-S--------------------------------------
SSS---------S------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-----------------S-----S--S
-SSSS---S-----S--------------S-----S--S-------S----S----------------------------
---------------S---------------------------------------------S------------------
------------------------------------S------S------------------------------------
-------------------------------------------------------SSS-SS-SSSS-SSS----------
---------S-S----------------S-----------S-------------------------S-------------
---------------S--------------------------S-------------------------------------
------------------------S---------S--------S------------------------------------
-----------S--SSSSSSSSSSSS
>forward_1044
--------------------------------------------------------------------------------
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----------------------------------------------------------------CTTGTTGGACCACCCA
CTGG----------------------------------------------------------------------------
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--------------------------
>reverse_2607
--------------------------------------------------------------------------------
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----------------------------------------------TGCCACAAGTGGAGACCTTC--------------
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--------------------------
