>input_sequence_57242
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----------------------------------------ATGGAGCAGGCGAGGACGACCAAGACGCAGAGGACGGAAG
ACGAGGAACACGAGGGTGGCGGGATGCAGCGAGTCCCGGAGGAATGCCTGGCGATGGCCATTGGCCTGACCTCACCGGCC
GACGCTTGCCGCGCCGCCGCGGTGTCCGCGGCCTTTCGGTCAGCGGCGGACTCCGACGCCGTGTGGGAGCGGTTCCTGCC
GCCCGACTGCGACGCCATCCTGGAGCGGGCCGTCCACCTCGTAGACTCCTCCTCCAAGAAGGAGCTCTTCATGGACCTCA
GTGACGAACATGTCCTCCTCGACGATGGCAAAAGGGTGAGTGAGTGCTAGATTTCCTCGCGAC-----------AAAAAG
ATCATCGATTTGTTCAATCTGTTTCTCTGATGAAGTAG---AGTACCGATCGATCGGACATATGCAT--GCATGGCTTCT
AATTTATGAC---CTGGTTAATGTTCG----T----------------TAGAGTTTTGGGCTCCAGCGATCGACTGGCGC
CAAATGCTACATGCTATCTGTGAGCGACATGGGAATCGCTTGGGGTCATACAGATCTTTACTGGAGAGAGTTGTCGGACC
CAGATGCACGGTAATTAATTCCCATATACTATACCATGGGGGATTTGATCATTTGCCCCCACTTTACGTTGCACTTTGAT
AGTACTGTACTACCTCTCATACATATCTCGGAAATTGCATTACTTGTACAAGGTTAATTGCCTTGTGTTCCTTTAATTAA
--------------------------------------------------------------------------------
--------------------------------ATTTGTTCGACGATTAAGCTTAGG------TCCAAGGTGGCAGAGCTC
GTGTCAGTGTGCTGGCTGGGCTTGTCTGGCCGAATCAGCAGTAAGGAGCTCTCACCAGGCACCCACTACGCAGGCTACCT
CGTCTTCAAGCTCACACACGACGCCCACGGCCTGAGCGCCCCGCGCCAGGTTTCATATGTTGAGGTAGACGGCCAGGTGG
TGGC------------------------------------------------------GGGGAGCGTCCGCACGCCGTCT
TTCCATCCCTGCAACCGTGCCGCTGCTTCCTGCGGCGAGGCCGGA------GAGCCGCACGAGCACGCGGAGGAGGACGG
CGTAGGGGGCGTCAGGAGGTACCCAAGGCAACGGGACGACGGGTGGCTGGAGCTGGTGATCGGCGATTACCACACAGGCA
CA---------GGTGATGATGATGTAGGAGCAGATATTAAGATGGAACTGCATGAGTGGGAGGAGCTCAAGTGGAAGAAG
GGGCTCATCATCCAGGGAACCGAGTTCAGGCCTAAACAAGCTTAG-----------------------------------
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------------------
>chr5B_1_TraesCS5B01G559800
GCGGCGTCCGTCTTCGCCCCTCTGGCATGTATTACGCGGTTCCGGAGATACACGCCTCGGGCTTGGAACATTCGAGAGCA
CCCACGAGGCCGCCCACGCGTACGACGCTGCGGCGTGGCGCCTCGGGTGGCCTCGATCGCAGATGAACTCCTCTGACAAG
TGGACGCGCGAGCAGACGCGGGATCTCGCGCCTCCCCCGCGACTAATCAACGACGAGGATCGCCGCCTCCTCATAGCGGA
GGCGGACGAGCACAGAGGGCGGTGCGGCGTGAGCACTTCCCACAGGATGTCACCGCCGAGAACGAGTTCTGGATGCAAAG
GAGGGCGGAGCGAGCCGTGCATCGAACGGACAAGCATGTGCGGAAGGAACTGGCGGAAGCCTAGATCGAGCTGGGACCTA
CGTCGACCTGGGACGATGAAGATCCTCGGTCGCTCGACGCGATCTATTTTTATTTAGCGTCCTTTTATCTATTTTTATTT
AGCATAGTATGAACTTGCTTGTGGTATGGAGCTTGAACTGTGCTATGAATTATATGTTGTTTCATATTTGTTTGTACGTG
ATTTTTCTCAAGCATCAGCTGGTCGCGAGCGCTGGTTTTTACCACGTCTTAACGCTATAGAGCACGCTAAATTTTGCAGC
GTCAGGTAAAGCAACCACCCTCTCGCTGCACGCGCTAAAACGCTAGTATTTCGGAGCAACAAATTTGTTTTAGTGCGAGA
TGCTCTTATCCTCTTCACCGCGACTGCTGGGTGCTGGGCTGCTGGCCCCACAGCACATCCCGTCCCTTTTCTTCCTGCCG
TGCCCACGACGCTGCTCCTGCCTATCTACTTTTATCAGACGCCATTGCTGCAGCAGGTGCTGCACGGGGCGCCTTCCTCC
CCACGAAGCCGCGTTGTTGTGGAGCTGCTGCTGTTGCACAGGATGCCATCGCTATGGAGCTGCTGCAATGGGGAAAGGTG
CAAGCCATGAACTAACTGCAACTCTTGAACGAAGACCACCATGGAGCAGGCGAGGACGACCAAGACGCAGAGGACGGAAG
ACGAGGAACACGAGGGTGGCGGGATGCAGCGAGTCCCGGAGGAATGCCTGGCGATGGCCATTGGCCTGACCTCACCGGCC
GACGCTTGCCGCGCCGCCGCGGTGTCCGCGGCCTTTCGGTCAGCGGCGGACTCCGACGCCGTGTGGGAGCGGTTCCTGCC
GCCCGACTGCGACGCCATCCTGGAGCGGGCCGTCCACCTCGTAGACTCCTCCTCCAAGAAGGAGCTCTTCATGGACCTCA
GTGACGAACATGTCCTCCTCGACGATGGCAAAAGGGTGAGTGAGTGCTAGATTTCCTCGCGAC-----------AAAAAG
ATCATCGATTTGTTCAATCTGTTTCTCTGATGAAGTAG---AGTACCGATCGATCGGACATATGCAT--GCATGGCTTCT
AATTTATGAC---CTGGTTAATGTTCG----T----------------TAGAGTTTTGGGCTCCAGCGATCGACTGGCGC
CAAATGCTACATGCTATCTGTGAGCGACATGGGAATCGCTTGGGGTCATACAGATCTTTACTGGAGAGAGTTGTCGGACC
CAGATGCACGGTAATTAATTCCCATATACTATACCATGGGGGATTTGATCATTTGCCCCCACTTTACGTTGCACTTTGAT
AGTACTGTACTACCTCTCATACATATCTCGGAAATTGCATTACTTGTACAAGGTTAATTGCCTTGTGTTCCTTTAATTAA
--------------------------------------------------------------------------------
--------------------------------ATTTGTTCGACGATTAAGCTTAGG------TCCAAGGTGGCAGAGCTC
GTGTCAGTGTGCTGGCTGGGCTTGTCTGGCCGAATCAGCAGTAAGGAGCTCTCACCAGGCACCCACTACGCAGGCTACCT
CGTCTTCAAGCTCACACACGACGCCCACGGCCTGAGCGCCCCGCGCCAGGTTTCATATGTTGAGGTAGACGGCCAGGTGG
TGGC------------------------------------------------------GGGGAGCGTCCGCACGCCGTCT
TTCCATCCCTGCAACCGTGCCGCTGCTTCCTGCGGCGAGGCCGGA------GAGCCGCACGAGCACGCGGAGGAGGACGG
CGTAGGGGGCGTCAGGAGGTACCCAAGGCAACGGGACGACGGGTGGCTGGAGCTGGTGATCGGCGATTACCACACAGGCA
CA---------GGTGATGATGATGTAGGAGCAGATATTAAGATGGAACTGCATGAGTGGGAGGAGCTCAAGTGGAAGAAG
GGGCTCATCATCCAGGGAACCGAGTTCAGGCCTAAACAAGCTTAGTTCATTTATCATATGGTAATCAAATCTCCACCGTG
TGGAATGGAGTAGCTTCTTATCTTACACTAAAGAAATAATTTGGGTCAGTCTAAATGTCCAGCGAGCAATATATTTGATA
GCCCTTCAGACGTTAACTGTCATGTATTTCTGTTTCTGCTTGTAGTTGTTTTTGAATAAAGAATATATTACATCCGGAAG
AATTGACCATCTTTGACCAATTATTTGGGGCTGTAGTATGAGGTTGCTTATGTATCATTACAATTGTCTTTGTGCAATTA
TTAGGCTTGCACAGGGTTTTCAAAATGCAAGTTAATCCGCCACAAACACAATATAATTGCTGGCTTACTTGTGTTGTTCC
TGTGGTTAGTATGCAACATGCAGATGTCACCGTTTTCATTTTTTATGCCTCTACTACTGATCATGCTAGGAACTTGAAGT
GAATCTTGTCAGCAGCCCAATCATCGCCACCGAAGAGGAGGCTCTTCAGGAAGATGCGCGGGAAGAGGCCAACTCAAGCA
CTGGGCC-AGCAGGCCGGCCCATCCGCAGCAAGAAGGTTCCCCAGTGGCTTGCAAGCCCAAACTGGGCCAGCTAAGCGGG
TGTAACGGTAGCTAGCGTTTAAATACGGC-GATCGACTCCAGCAGAGGACAGGAA-GGAAGAGGAGGCTTTGGCCTGGAG
A--GTGTGGC--GTGTGTGATTTGT--AATCTGAATAGCTGTGTGGGTGGTTGGGAGGACAGCTAAACC-A-AATTCGAA
TCTAGATCTCGTTCATGGAGGTAGTGGGTTCCTCACATCTAGTA-TCAGATCTTTTTGATCATGGAGATTCCTAGCCACA
TCCACGCCACGCGTTTCAAGCTCCAGCAGCGGAGCGCTGCCATGGACAAGCTGTCGTCCGAGGGGCGGCAGATCCAGGAG
CTGCTGCGTGCGGACTTCGCCGAGGTGCTGGATCGATGTTTCAAGGCGCACGTCGAGGAGATCATCAAGTCCGTCGGCAC
CAT-CTCAAGGAGACGAC
>chr4A_1064
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-----------------------ATCCAGGGAATCCCGGAGGAATGTCTGGCGAAGGCCATCGGTCTGACCTCGCCAGCC
GACGCCTGCCGCGCGGCCGCAGTGTCCACCGCGTTCCGGTCGGCGGCGGACTTGGACGCGGTGTGGACACGGTTCCTGCC
GCCGGACTGCGACGCCGTCCTGGAGCGGGCCGTCCACCTCGTGGATGCTCCCTCCAAGAAGGAGCTCTTCATGGACCTCA
GCAACGAACACGTCGTCCTCGACGATGGCAAAATGGTCTGTCGATCAGCCCTTTACTTTTGCAG----------------
----------------------------------------------------------------------------TTGC
ACTTAGCTTTCTGACGATGGATTTGGTTAAACACGCATGGGCTATCACTAGAGTTTTGGGCTGGAGAGATCGAACGGCGC
CAAATGCTACATGTTGTCAGCAAGCGAGCTGGTAATCGAATGGATGCATGAAAATCTTTACTGGACAAGGAGGACCGACC
CTGATTCAAGGTATACAGATGTACTAGTATACTTTATTTTTTGTT-----------------------------------
-------------------TATATATATTGTTTAATGGATTACTCTAGCTAGCTTGCCTTATAGTACCACTAAGCAGTAC
TGGTAAGTGGTAAGCTAGGTGTAAGACTGGTAGGACTCGCTTACTACTCTCTCCGTCCCAAAATTCTTGTCTTAGATTTG
CCTAGATACGGATGTAACAAGATTGCATGTTGATCTGTTTGACAATGAACTGAGATAGGTTCTCCAAGGTGGCAGAGCTT
CTCTCAGTCTGCTGGCTCCACATCTACGGCACGATCAACAGCAGGGAGCTCACTCCAGCCACCCACTACGCGGCCTACCT
CGTCTTCAAGCTCACCCATGATGCCTCAGGCCTCAGTTCCCCGCGGCAGACATCGTTCGTCAAGGTAGGTGGCGGGCCGT
GTCTCCAGTCCTGCCGGCCTTCCAGCACCAGCGGCGGTGCCTCTTCATCCCTGCTGGTGGGGAGCACCCACACAGTGTCT
CTCCATCCCTGCAACCGTGCTTCATGCACCCGTAACGGCGCTGCGGCTGCGGAGCCGCACGAGCACGAGCAAGGAGGAGG
AGTCGGCGGTGTCGTGAGGTACCCGCGGCATCGGGTCGACGGGTGGTTGGAACTGGAGATGGGCGACTTCCACACGGACA
CGGACATATGCGGTGGGGATGATG------------TTATGATGGAAGTGCATGAGTGGGAGGAGCTCAAGTGGAAGAAG
GGACTCATCATCGAAGGAATCGAGATCAGGCCTA----------------------------------------------
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>chr5B_1072
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-------------------------------AGTCCCGGAGGAGTGCCTTGCGAAGGTCATCGGCCTGACCTCGCCTGCC
GACGCCTGCCGCGCCACCGCGGTATCCGCGGCCTTCCAGTCGGCGGCAGACTCTGACGCCGTGTGGGAGAGGTTCCTGCC
GCTGGACTGCGACGCCGTCCTGGAGCGGGCCGTCCACCTCGTGGATTCCTCCTCCAAGAAGGAGCTCTTCATGGACCTCA
GCGACGACCATGTCCTCCTCGACGGCGGCAAGAGGGTGAGTGCCAAATTTCCGGTCATTCATGACGACAAAAAAAAAAAG
ATTATCGATTTGTCTAATTTGTTTCTTCGATAAAGTGGATCAGTACTGATTGATCGGATATACTATGCCGCATGGCTTCT
AATTAACATTCTGCTGGTTAATACGTCTTAAT----------------TAGAGTTTTGGGCTCCACCGATCGAGCGGCGC
CAAGTGCTACATGCTATCTGTGAGTGAGATGGGAATCGCTTGGGTTACAGCAGATCTGTACTGGATAAAGAGGTCGGACC
CAGATTCAAGGTAATTAATT------------------------------------------------------------
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>chr4A_2660
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-----TTGTCAGCAGCCCGATCGCCAACACTGAAGATGAAGCCGATAGAGGAGAGGCGCGGGAAGCGAGCAACTCAAGAC
ATGGGCC-GGCAGGCCGGCCCATCCATAGCAAGAGGGTTCCCCAGTGGCTTGCAAGCCCAAACTGGGCCCGCTAAGCGGG
TGTAACGGTAGAGAGAGTTTAAATACTTCCCATCGTCATCAGGAGAGGACAGGAA-CGAACGGGAGGCTTCGGCCTGGCT
CGAGTG-TGC--GTTTGTGA-TCTGTAAATTCGAATTGCTGTGTTGGTGGTTGGGAGGACAGCTAAACC-ACA-TTCAAA
CCTAGATCTCGTTCATGGAGGTAGTAGGTTCCTTACATCTGGTACTCAGAGCTTTCTGATCCTGGAGATCCCGAGCCACG
TCCACGCCACGTGCTTCAAGCTCCAGCAGTGGAGCATCGCCATGGACAAGCCGTCGTCCGAGGGGCGGCAGATCCAGGAG
ATGCTTCATGCGGACTTCACGGAGGTGCTGGATCAACGCTTCAAGGCACACGGTGAGGAGATCATCAAGTCTGTCGGCAA
AATACTGAACGAGATGAC
>chr5D_2660
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-----TTGTCAGCAGCCCGATCGTCAACATTGAAGATGAAGCTGATCAAGGAGA-GGCCGGGAAGCGAGCAACTCAAGCA
CTGGGCC-GGCAGGCCGGCCCATCCGCAGCAAGAGAATTCCCCAGTGGCTTGCAAGCCCAAACTGGGCCCGCTAAGCGGG
TGTAACGGTAGAGAGGGTTTAAATACTTCCCATCGTTATCAGTAGAGGACAGGAA-GGAACGGGAGGCTCCGGCCTGGCT
CGTGCG-TGA--GTGCGTGA-TTGT--AATTCGAATTGCTATGTGGGTGGTTGGGAGGACAGCTAAACC-ATA-TCCAAA
CCTAGATCTCGTTCATGGAGGAGGGAGGATCCTCACATCTGGTACTCAGAGCTTTCTGATCCTGGAGATCCCGAGCCACG
TCCACGCTACGCGCTTCAAGCTCCAGCAGCGGAGCGCCGCCATGGACAAGCTGTCGTCCGAGGGGCGGCAGATCCAGGAG
CTGTTTCGTGCGGACTTCGCCGAGGTGCTGGATCAACGCTTCAAGGCGCACGGCGAGGAGATCATCAAGTCTGTCGGCAA
AATGCTCAAGGAGACGAC
>chr7B_2661
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------TGTCAGCAGCCCGATCATCGACACCGAAGAAGAAGCTCTTCTGGAAGACGCGCGGGAAGAGGGTAACTCAAGTA
CTGGGCC-GGCAGGCC-GCCCAACCGTAGCAAGAAGGTTCCCCAGTGGCTTGCAAGCCCAAACTGGGCCCGCTAAGCGGG
TGTAACGGTAGCGTGCGTTTAAATACTGCCGATCGTCATCAGCAGAGGATAGGAA-GGAACGGGAGGCTTCGGCCTGGGA
GAGGTGTGGC--GTGTGTGACTTGT--AATTCGAATTGTTGTGTGGGTGGTTGGGAGGACAGCTAAACC-A-A-TTCAAA
TCTAGATCTCGTTCATGGAGGTAGTAGGTTCCTCACATCTGGTACTCAGAGCTTTTTGATCCTGGAGATTCCTAGCCACA
TCCACGCCACGCGCTTCAAGCTCCAGCAGCGGAGCGCCGCCATGGACAAGCTATCGTTCGAGGGGCGGCAGATCCAGGAG
CTGCTGCGTGCGGACTTCGCCGAGGTGCTGGATCAACGCTTCAAGGCGCACGGCGAGGAGATCATCAAGTCCGTCGGCAA
CATGCTCAAGGAGACGA-
>chr4A_2661
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------TGTCAGCAGCCCGATCATCGACACTGAAGAAGAAGCTCTTCAGGAAGACGCGCGGGAAGAGGGTAACTCAAGTA
CTGGGCC-GGCAGGCCGGCCCATCCGTAGCAAGAAGGTTTCCCAGTGGCTTGCAAGCCCAAACTGGGCCCGCTAAGCGGG
TGTAACGGTAGCGTGCTTTTAAATACTGCCGATCGTCATCAGCAGAGGGGAGGAA-GGAATGGGAGGCTTCGGCCTGGAA
GAGGTGTGGC--GTGTGTGACTTGT--AATTCGAATTGTTGTGTGGGTGGTTGGGAGGACATCTAAACC-A-A-TTCAAA
TCTAGATCTCGTTCATGGAGGTAGTAGGTTCCTCACATCTGGTACTTAGAGCTTTTTGATTCTGGAGATTCCTAGCCACT
TCCACGCCACGCGCTTCAAGCTCCAGCAGCGGAGCGCCGTCATGGACAAGCTGTCGTCCGAGGGGCGGCAGATCCAAGAG
CTGCTGCGTGCAGACTTCGCCGAGGTGCTGGATCAACGCTTCAAGGCGCACGGCGAGGAGATCATCAAGTCCGTCGGCAA
CATGCTCAAGGAGACGAC
>chr4A_2661
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------TGTCAGCAGCCCGATCATCGACACGGAGGATGAAGCTGTTCAGGAAGACGCGCGGGAAGAAGGTAACTCAAGTA
CCGGCCC-AGCAGGCCGGCCCATCAGTAGCAAGAAGGTTCCCCAGTGGCTTGCAAGCCCAAACTAGGCCCGCTAAGCGGG
TGTAACGGTTGCGTGCGTTTAAATGCTGCCGATCGACATCAG-AGAGGATAGGAAGGGAACAGGAGGCTTCGGCCTGGCG
AAGGTGTGGC--GTGTATGATTTGT--AATTCGAATTGCTGTGTGGGAGGTTGAGAGGACAGCTAAACC-A-A-TTCAAA
TCTAGATCTCGTTCATGGAGGTAGTAGGTTCCTCACATCTGGTACTCAGAGCTTTTTGATCCTGGAGATTCCTAGCCACA
TCCACGCCACGTGCTTCAAGCTCCAGCAGCGGAGCGCCGCCATGGACAAGCTATCGTCCGAGGGGCGGCAGATCCAGGAG
CTGCTGCGTGCGGACTTCGCCGAGGTGCTGGATCAACGCTTCAAGGCGCACGGCGAGGAGATCATCAAGTCCGTCGGCAA
CATGCTCAAGGAGATGAC
>chr4A_2661
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------TGTCAGTAGCCCGATCATCGACACGGAGGATGAAGCTGTTCAGGAAGACGCGCGGGAAGAAGGTAACTCAAGTA
CCGGGCCAAGCAGGCTGGCCCATCCGTAGCAAGAAGGTTCCCCAGTGGCTTGCAAGCCCAAACTGGGCCCGCTAAGCGGG
TGTAACGGTTGCGTGCATTTAAATGCTGCCGATCGACATCAG-AGAGGATAGGAAGGGAACAGGAGGCTTCGGCCTGGCG
AAGGTGTGGC--GTGTGTGATTTGT--AATTCGAATTGCTGTGTGGGAGGTTGAGAGGACAGCTAAACC-A-A-TTCAAA
TCTAGATCTCGTTCATGGAGGTAGTAGGTTCCTCACATCTGGTACTCAGAGCTTTTTGATCCTGGAGATTCCTAGCCACA
TCCACGCCACGTGCTTCAAGCTCCAGCAGCGGAGCGCCGCCATGGACAAGCTATCGTCCGAGGGGCAGCAGATCCAGGAG
CTGCTGCGTGCGGACTTCGCTGAGGTGCTGGATCAACGCTTCAAGGCGCACGGCGAGGAGATCATCAAGTCCGTCGGCAA
CATGCTCAAGGAGACGAC
>chr4A_2661
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------TGTCAGCAGCCCGATCGTCAACACTGAAGATGATGCTGATCGAGAAGAGATGCGGGAAGCGAGCAACTCAAATC
ATGGGCC-GGCAGGCCAGCCCATCCGTAACAAGAGGGTTTCCCAGTGGCTTGCAAGTCCAGATTGAACCCGCTAAGCGGG
TGTAACGGTAAAAAGGGTTTAAATACTTCCCGTCGTCATCAGTAAAGGACAGGAA-GGAATGGGAGGCTTCGGCCTGGCT
CGAGCG-TGT--GTGCGTGATTTGT--AATTTGAATTGTTGTGTGGGTGGTTGGGAGGACAGCTAAACCAA-A-TTCAAA
CCTAGATCTCGTTCATGGAGGTAGCAGGATCCTTATATGTGGTACTCAGAGCTTTCTGATCCTGGAGATCCTGAGCCACG
TCCACGACACGCGTTTCAAGCTCCAGCAGCGGAGCGCTGTCATGGACAAGCTGTCGTTCGAGGGGCGGCAGATCCAGGAG
CTGCTTCGTGCGGACTTCGCCGAGGTGCTGGATCAACGCTTCAAGGCGCACGGCGAGGAGATCATCAAGTCCATCGGCAA
AATGCTCAAGGAGACGAC
>chr6B_2661
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------TGTCAGCAGCCCGATCATAGACACCGAAGATGAAGCTGTTCAAGAAGACGCGCGGGAAGGGAGTAACTCGAGTA
CTGGGCC-GGCAGGC-GGCCCATCCGCAGCAGAAGGGTTCCCCAGTGGCTTGCAAGCCCAAACTGGGCCCGCTAAGCGGG
TGTAACGGTAGTGAGCGTTTAAATACTGCCGACCGTCATCAGTAGAGGGTAGGAA-GGAACGGGAGGCTTCGGCCTGGCA
GAGGCGTTGC--GTGTGTGA-TTGT--AATTCGAACTGCTGTGTGGGAGGTTGGGAGGACAGCTAATCC-A-A-TTCAAA
CCTAGATCTCGTTCATGGAGGTAGTAGATTCCTCACATCTGGTACTCAGAGCTTTTTGATCCTGGAGATTCCAAGCCACG
TCCACGCCACGCGTTTCAAGCTCCAGCAGCGGAGCCCCTCCATGGAGAAGCTATCATCCGAGGGGCGGCAGATCCAGGAG
CTGCTGCGTGCAGACTTCGCCGAGGTGCTGGATCAACGCTTCAAGGCGCACGGCGAGGAGATCATCAAGTCCGTCGGCAA
TATGCTCAAGGAGACGAC
>chr6A_2663
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--------TCAGCAGCCCGATCGTCAACACTGAAGATGATGCTGATCGAGAAGAGACGCGGGAAGCGAGCAACTCAAGTC
ATGGGCC-GGCAGGCCGGCCCATCCGTAACAAGAGGGTTCCCCAATGGCTTGCAAGCCCAGACTAGGCCCGCTAAGCGGG
TGTAACGGTAGAGAGGGTTTAAATACTTCCCGTCGTCATCAGTAAAGGACAGGAA-GGAACGGGAGGCTTCGGCCTGGCT
CAAGCG-TGTGTGTGTGTGATTTGT--AATTTGAATTGTTGTGTGGGTGGTTGGCAGGACAGCTAAACCAA-A-TTCAAA
CCTAGATCTCGTTCATGGAGGTAGCAGGATCCTTACATCTGGTA-TCGGAGCTTTCTGATCCTGGAGATCCCAAGCCACG
TCCACGCCACGCGTTTCAAGCTCCAGCAGCAGAGCGCCGCCATGGACAAGCTGTCGTCCGAGGGGTGAGAGATCCAGGAG
CTGCTTCGTGCGGCCTTCGCCGAGGTGCTGGATCAACGCTTCAAGGCGCACGGCGAGGAGATCATCAAGTCCGTCGGCAA
AATGCTCAAGGAGACGAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS--S---S------------------------S------S-----------S--S---
-----S-----------------------------S-----S-----------S--------------------------
---S------------S-------------------------S--S----------------------------------
-S----------------------------------------SS-SS-SSS---S--SS--SS-----------------
--S----------SS---S-------SS---S----S---------S---S-------S---SSSSS-------------
----S-SSSS------------S-SSS----------------------------------------------SS-----
---------------------------S----------------S----S---------------S-S--SS--------
-----S--S-----------SSSS--SSS--SSSS--SSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS--S----S-S-SSS-S--S------SSSS-S--S--SSS-SSSSSSSSSS-SSSSS-S--S
--------------------------------------------------------------------------------
----------------------------------S----S---S--S--SSSSSSS-----------------------S
S-S-----S--------SSS-S-S-SS---SSS----S---S-S-------S-S----S------------S-S------
---------------S--S--S---SSS-----S--SS-------S---SSS--S-SS--SS------SS---SS-SS-S
SSSS-------------------------------------------------------------SS--S---SSS----
S-------------------SS-SSSSS--S-SSS--SS--S-SS----------------------S-S-S-SS-SS--
S--S--S--S---SS---------SS----S----S----------S----S----S---S-----S-S------S-S--
-S-------------SS-------SSSSSSSSSSSS---S-------S--------------------------------
--S---------S-S----S----S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS-------------S-------S---------S--S--------------S-------------S-----------
---------------------------------------------------------------------S----------
------------S-------------S----------SS---------------------S---------S---------
------------------------------S-----S------------------------------------S---S--
-------------------------S--------------S---------S----------S------------------
--------------------------------------------------------------------------------
----------------------------------S-S-S-------------S--------------------------S
------------------
>forward_83
---------------------------------------------------------------TGGAACATTCGAGAGCA
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_1029
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------AGAGGACGGAAG
ACGAGGAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_84
----------------------------------------------------------------GGAACATTCGAGAGCA
CCCA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_1947
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TGGCCGAATCAGCAGTAAGG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_964
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GCAATGGGGAAAGGTG
CAAG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2307
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TTACCACACAGGCA
CAGGTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_1327
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GCAAAAGGGTGAGTGAGTGC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2899
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AATCATCGCCACCGAAGAGG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
