>input_sequence_57224
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-----------------------------------------------------------------------------ATG
CAGCTGCGCTCCCTCCCGTTCGCCGCGAGCGCCGTGGCCGGAAGGAGCTTCCTTGCCGCTATTCCTCGGCCGGTGACGGA
GAGAAGGAAGCAGATATGTTGCAACGCGGGCAACTCCTCGTCGGAGAAGGAGG------GCAGCGAGCTTAGCACGGCGG
AAGAGGCGCTGCGGCGGCTGGCGGAGCTCGACGCCCAGCTGGAGGGGCTGAAGGAGCCCAAGATGAGGCCGCCGCCGCCC
CCTCCTCCCCCGGGTAATCATTGCC-TTTTCCCACTCCGTTCTCCTCGTGCCAAGTTGCCTGCCTCTCCGGTTTTCCATG
CGTCCATGCTCCCCTGTCCTCCCGTTCAATCAGTCGTCTAGAGTTCGAGATCTTCATAGCGGCCAATAATAATTGATTCA
CGT-AAGTTCGCCGTTCGCGTGTTCTCTCGAATGAAAATTTATTAGTTGGGCTGCCTAACCTACGGAGAAGAGACGGATC
AATCTTCAATAACCTACTCTGAAACAACTGCTCGATGGAGCAGG-----TCATTTGTTAGCCTCGTGGTGCA--------
------TACTTCAGTATACAGTAGAGCTAGTCATTTCTCAAGTACTGTAC--------CTACGAATAGTAGACGTATTAC
TGTTTTTGGTTACGGAATGCGCAGGAACTGTTCATTTCCTCATTTGTTTCTTTCGTAGCAGTAGTACAGTGGCACTT---
---------------------------------ACTTTACAGCGTAGAGCGATGCTTCTAGATATACCAAGCCCGAGTGA
TCCGTA----CAATTCACCAGTTGCTAGGCCACGACAGCACATTGATCCTCAAGTCGCTTCCTACTTTTTCTAGGGGAGT
ACCGTGTGCTTGCGAGCATAGCATGTG------TGGAAGTAGTCCCGCCGTTTCAAATTACTCGTCGTGGTCAC------
--------------------------------------------------------------------------------
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--AGTCCATGCCATTGCTTTGCCTGCTTGATCACTTCTGACTTCTCTGCTAACTTCTCTGTATGGGTACTTGTGTATTTA
CTTCTGTTTTGTT------CACAGATCCTTTCATGGACCGCGATATGATAATACAGCGAGGACGCCCAAGTGATGAGCTC
CCAGAAATGACCCCGGCCTACGTGACGTTCTCGACTCTGGCAATTTTTATCTTGACCATCTTCACCAACGTGGTGTTCAA
CGTGTACATCAAGCCTTCCGTGGACGGCGCCGATCAGCCGGTACGAATCCAGAGAGTGCCTCTGGCTGATCCTAGCTTCC
AGCAGCCCGGCAATTCTAGTGATAGCTCGTAG------------------------------------------------
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--------------
>chr2A_1_TraesCS2A01G199500
ACATCTGTCTGCTAAATAGAAAGTAGCATAATTGCAGAAATTAA-TTTCTGGCAACTTAAGAGGCAATCTCAGAGGGTGA
ATGGACCACCACCAACTCAGATATTATAACAGTTTAAGATA-------TACT------GCAGTTTGTGGTATCCACTTCT
AGCATGAGCTTGTGAACAAGAACTGGAGCATCTATGATGATATTGTAGTCCAATTTCAACGGACTCTGCACTGGAACCCA
AAACAGCGATGGCCAGTTTGGGGCTTGGCTTGTGCTAGCCAACTAGGGTTTATCCACCCATACGCTGACTACGGCGACAA
AGCAATTCCCGACAGCGCGTGCATCTGCATCCAACCAGCGACAGGAACCATCGCAACAAAGCAATTCGCGATCAAACCGC
GCAAACTCCTCCAGTAGGCTCGACCTTTC-CAGAAAATCCAAGAGAGAAAACGAGTACTCACTCGTAACATCGCAGGGAG
TTGGATCCTCGCTGCCGTCGGACGGCGGGCGGGCGAGGACGACGGCCGCGGGGGAAGTCTCGGCGTCGTCTTCGGTCGTC
TCGAACGACACGGCGTCCTCGACCGCCGCGCCTCCGGCTGGGGCCCAGGTGCTAGTCGCCGTCCATGGCCTCCCGGGCTC
GCCTACCGA------------TCCCGATCCAGGTGTCCCCATCGCTCGCGGTCGCCGCCGCCCGCCGCTTGGGCGGAGAC
GGTGGGTATCGGCGGTGGCGTGCCGGCGGTGTTCGCCGTTGGTCGCCTCGCTCACTTCCGGATTCCGCGAGCGCTCGCTC
GGTACGCGAATCTGGTGCGGGATCCGATCTTACGGGCCCTCGCA-------GTAGAAGATTTGGGTTGGCCGCGTACTTC
GTCGTCCTACCGTTAGGCCTGT---AAATGACGCCGACTCAACCTATGGGCCTTCCGCGCGTTGGGCTTCGGCCCGTTTT
CAAATCGTTATCCACACCGCGAATGCTCCACCACCGCAGGTGCAGACGATGCTTCCCGAGCGCGCGCGGCAAAGAGGATG
CAGCTGCGCTCCCTCCCGTTCGCCGCGAGCGCCGTGGCCGGAAGGAGCTTCCTTGCCGCTATTCCTCGGCCGGTGACGGA
GAGAAGGAAGCAGATATGTTGCAACGCGGGCAACTCCTCGTCGGAGAAGGAGG------GCAGCGAGCTTAGCACGGCGG
AAGAGGCGCTGCGGCGGCTGGCGGAGCTCGACGCCCAGCTGGAGGGGCTGAAGGAGCCCAAGATGAGGCCGCCGCCGCCC
CCTCCTCCCCCGGGTAATCATTGCC-TTTTCCCACTCCGTTCTCCTCGTGCCAAGTTGCCTGCCTCTCCGGTTTTCCATG
CGTCCATGCTCCCCTGTCCTCCCGTTCAATCAGTCGTCTAGAGTTCGAGATCTTCATAGCGGCCAATAATAATTGATTCA
CGT-AAGTTCGCCGTTCGCGTGTTCTCTCGAATGAAAATTTATTAGTTGGGCTGCCTAACCTACGGAGAAGAGACGGATC
AATCTTCAATAACCTACTCTGAAACAACTGCTCGATGGAGCAGG-----TCATTTGTTAGCCTCGTGGTGCA--------
------TACTTCAGTATACAGTAGAGCTAGTCATTTCTCAAGTACTGTAC--------CTACGAATAGTAGACGTATTAC
TGTTTTTGGTTACGGAATGCGCAGGAACTGTTCATTTCCTCATTTGTTTCTTTCGTAGCAGTAGTACAGTGGCACTT---
---------------------------------ACTTTACAGCGTAGAGCGATGCTTCTAGATATACCAAGCCCGAGTGA
TCCGTA----CAATTCACCAGTTGCTAGGCCACGACAGCACATTGATCCTCAAGTCGCTTCCTACTTTTTCTAGGGGAGT
ACCGTGTGCTTGCGAGCATAGCATGTG------TGGAAGTAGTCCCGCCGTTTCAAATTACTCGTCGTGGTCAC------
--------------------------------------------------------------------------------
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--AGTCCATGCCATTGCTTTGCCTGCTTGATCACTTCTGACTTCTCTGCTAACTTCTCTGTATGGGTACTTGTGTATTTA
CTTCTGTTTTGTT------CACAGATCCTTTCATGGACCGCGATATGATAATACAGCGAGGACGCCCAAGTGATGAGCTC
CCAGAAATGACCCCGGCCTACGTGACGTTCTCGACTCTGGCAATTTTTATCTTGACCATCTTCACCAACGTGGTGTTCAA
CGTGTACATCAAGCCTTCCGTGGACGGCGCCGATCAGCCGGTACGAATCCAGAGAGTGCCTCTGGCTGATCCTAGCTTCC
AGCAGCCCGGCAATTCTAGTGATAGCTCGTAGACGTATATGCATGACACGATAATACAGTTTGATACAGTGGC-----AA
GGGCTGTGCTTTGCAAGTTAACTGAAGCCATGTGCCTCATCCCTCATATTTGCGGCATTATGTACTCCCTCCGTCCCTCG
TATTTAGACAAATTTAAGACAAAAATTTTAAGACGAAGGGAGTATT-----------TAAGACCCACATGCTCTAAACAA
GCTGTGCTGTTGCTGGCCTCGGCCTTGAGGGTTTTCATCATTATGGAACAAGGTGCTGCA-CATGTGTCCATGGGGCTTC
ACCTGTAGTATGTGTATC-TTTTTTCTTTTCTTTCGATTAGCGGCTTCCATCGACTCAATGATGATCAATCAATTACAGT
CAGCAGCACAATGATCTCCTGGATCGAATATATCAGACCCAACTTGTGAACCAATTAATTGTGTCAGCGGTGATCATCGA
CGCTGAACTTGGAGAGCAAATTGCCTCTTCTCTCGCACTAATCAGCCAATGGCGCGGCAAACTGTTTGCAGCAACATGCA
TATGCTGATGCCAAAATTCCAAAAACGCCGACATGGATGAGCTGTGGGCAATGGTCGTGCGGCACGCGACAGAGGCGGAG
CAGCAGGGTACGTAGCGTACGCCCGTGGTAGCGGTCCCGGGCTCTGCGATCTTCTACTGTGTCTCTACTGGTTTTTTCTT
GCAGCTGTCTATAAATTTATATGTAGTA---TACTGTATTTCTTTGTCTCTCTTGATTTAATTTT-CTCCCGTTTGTTGT
ATTTAGCTTGTTTCGTCCGGATTATACACTGCCCCTGCTATAGCTTGTCGGCAGTTCTTGGGTTCCCGTAAAGATCACAC
AGCTTTCTCGTTGCCTTTCGCTTTCCCTATGCAAGATTCTCGATTGCTTTCCTATCGTAGACACAGTACATCTTGATCTG
TCTCCTATTTCCTCACAGCTCGAGCCATTCCTAATTTTTCTCATTTTATTTATTTATTCTTTGGTTTCATTAGAAATACC
AGTAGTTTTTTACG
>chr2D_1
ACATCTGTCTGCTAAATAGAAAGTAGCATAATTGCGGAAATTAA-TTTCTGGCAACTTAAGAGGTAATCTCAGAGGGTAA
ATGGACGACCACCAACTCAGATATTATAACAGTAAATATAAGATGTACTACT------ACAGTTTGTGTTATCCACTTCT
AGCATGAGCTTGTGAACAAGAACTGGGGCATCTATAATGATATGGTAGTCCAATTTCAACGGACTATAAACTGGAACCCC
AAACAGCGATGGCCAGTTTGGGGCTTGGCTTGTACTAGCCAACTAGGGTTTATCCACCCATACACTGACTACCGCGACAG
AGCAATTCCCGACAGCGCGTGCATCTGCATCCAACCAGCGACAGGAACCATCGCAACAAAGCAATTCGCGATCAAACCGC
GCAAACTCCTCCAGCAGGCTCAACCTTTC-CAGAAAATCAAAGAGGAAAAACGAGGGCTCACTCGTAACTTCGCAGGGAG
TTGGATCCTCGCTGCCGTCGGACGGCGGGCGGGCGAGGACGACGGCCGCGGGGGAAGTCTCGGCGTCGTCTGCGGTCGTC
TCGAACGACACGGCGTCCTCGACCGCCGCGCCTCCGGCTGGGGCCCAGGTGCTAGTCGCCGTCCATGGCCTCCCCGGGCC
---------------------TCCCGATCCCGGTGTCCCCATCGATCGTGGTCGCCGC-GCCCGCCGCTTGCGCGGAGAC
GGTGGGTATCGGCGGTGGCGTACCGGTGGTGTTCGCCGTTGGTCGCCTCGCTCACTTCCGGATTCCGCGAGCGCTCGCTC
AGTACGCGAATCTGGTGCGGGATCCGATCTTACGGGCCCTCGAAGCAAAGTGCAGAGGATTTGGGTTAGCCGCGTCCTTC
GTCGTCCTACCGTTTAGGCCTGTAAAAATGAGGCCGACTCAACCTATGGGCCTCCCGCGCATTGGGCTTCGGCCCGTTTT
CAAATCGTTATCCACACCGCGAATGCTCCACCACCGCAGCTGCAGAGGATGCTTCCCGAGCGCGGGCGGCAAAGAGGATG
CAGCTCCGCTTCCTCCCGTTGGCCGCGAGCGCCGTGGCCGGAAGGAGCTTCGTCGCCGCTATTCCTCGGACAGTGACGGA
GAGAAGGAGGCAGATATGTTGCAACGCGGGCAACTCCTCGTCGGAGAAGGAGGA---GGGCGGCGAGCCTAGCACGGCGG
AAGAGGCGCTGCGGCGGCTGGCGGAGCTCGACGCCCAGCTGGAGGGGCTGAAGGAGCCCAAGATGAGGCCGCCGCCGCCC
CCTCCTCCCCCGGGTAATCATTGCC-TTT-CCCACCCCGTTCTCCTGGTGCCAAGTTGCCTGCCTCTCCGGTTTTCCATG
CATCCATGCTCCCCTGTCCTCCCATTCAATCAGTCGTCTAGAGTTCGAGATCTTCATCGCGGCCAATAACAATTGATTCA
TGTCAAGTTCGCCGTTCGCGTGTTCTCTGAAATGAAAATTTA---GTTGTGCTGCCTAACCTACGGAGAAGAGATGGATC
AGTCTCC--------ACTCTGAAACAACTGCTCGATGGAACAGGTCCTCTCATTTGTTAGCCTCGTCACTAACTCTGGTG
CATACGTACTTCAGTATACAGTAGTGCTAGTCATTTCTCAAGTACTACACCTACGGGGCTACGAATACGAGTATTTCA--
---------TTACTGAATGCACAGAAATTGTTCATTTCCTCATTTGTT-CTTTCGTAGCAGTACTATGTCCTTTAAAGTT
CACAAGTGAGTGCACTAGTAGCACTTACTTTACACTTTACAGCGTAGAGCAATGCTTCTAGATATACCAAGCCCGAGTGA
TCCGTG----CAATTCATCAGTTGCTAGGCCACGACAGCACATTGATCCTCAAGTCGCTTCCTACTTTTTCTAGGGGAGT
ACTGTGTGCTTGCTAGCATAGCATGTA------TGGAAGTAC----------------TTCCCATCACAGTCCATGCCAT
TGCTTTGCCGTTCGCGTGTTCTCTGAACTAAAAATTTAGCTGGGCTGCATAATCTACGGAGAAGAGATGGACCGATCTTC
AATAGACTCTGAAACAACTGCTCGATGGAACAGGCCATTTGTTAGCCTCGAGCCTCGTCGCCAACTTTGGTGCAAACTTC
GGTATACACTATACAGTAGTGCTAGTCATTTCTCATGTTGTAGTACCTATGAATAGGAGAAGTATCGTTTCATTACACAA
TGCACACGAACAGTTCATTTCCTCATTTGTTCTTCAAAGTTTAAGTGCGTGCAGTAGCACAGTAGTGCTTACTTTACAGC
GTAGAGCAATGCTTCTAGATATACCAAGCCACAGTGATCCGTAGCGTACAATTCGCCAGTTGCTAAGCAACGACAGCACA
ATGATCCTCAAGTCACTTCCTACTTTTTCTAGGGGGGTATCCTTACTAGCATAGCATGTACTATGAAAGTACTTCCCATT
ATAGTCCATGCCATTGCTTTGCCTGCTTGATCACTTCT-------CTG------------TATGGGTACT----------
-TATGTTCAATTTTGTTAGCACAGACCCTTTCATGGACCGCGATATGATAATACAGCGAGGACGCCCAAGTGATGAGCTC
CCGGAAATGACACCGGCCTACGTGACGTTCTCGACTCTGGCAATTTTTATCTTGACCATCTTCACCAACGTGGTGTTCAA
CGTGTACATCAAGCCTTCCGTGGACGGCGCCGATCAGCCGGTGAGGATCCAGAGAGTGCCTCTGGCCGATCCTAGCTTCC
AGCAGCCCGGCAATTCTAGTGGTAGCTCGTAGACATATATGCAGGACACGATAATACAGTTTGGTAGATACAGTGT-GAA
GGGCTGTGCTTTGCAAGTTAACTCAAGTCATGTGCCTC-------ATATTTGCATCATGAT-------------------
-----------------------------------------GTATT-----------TAATACCCACATGCTCTAAACGA
GCTATGTT-TTGCTGGCCTCCACATTGAGGG----CTTCATTATGATGCAATGTGCTGCTGCATGTGCCCATGGGACTTC
ACCTGTACTATGTATATCCATT----TTTTCTTTCGGTTAGCAGCTTCCATCGACTCAATGATGATCAATCAATTACAGT
CAGCAACACAATGATCTCCTTGATTGAATATATCAGACCCAACTTCTGAACCAATTAATTGTATCAGCGGTGATCATGGA
CGCTAAACTTGGAGAGCAAATTGCCTCT--TCTCGCACTAATCAGCAGATGGCGAGGCAAATTGTTAGCAGCAACATGCA
TATGCTGACGCCAAAATTCCAAAAACGCCGACATGGATGAGCTGTGGACAATGGTCGTGCGGCACGCGACAGAGGCGGAG
CAGCAGGTTACGTAGCGTACGCCCGTGGTAGCGGTCCCGGGCTCTGCGATCTTCTACTGTGTCGCTACTGA---TTTCTT
GCAGCTGTGTATAACCTTATATGGAGTACTGTAC--TATTTCTTTGGCTCTCTTGATTTAATTTTTCTCTCCTTTCTTGT
ATTTGGCTTGTTTCGTCCGGAATATACACCGGCTCTGCTCTACCCTGTCGGCAGTTCTT-GGTTCCCGTAAAGATCACAC
AGCTTTCTCGTTGCCTTTCGCTTTCCCTATGCAAGATTCTCAGTTGCTTTCCTATCGTAGACACAGTACGTCTTG-----
--------------------------------------------------------------------------------
--------------
>chr2B_1
ACATCTGTCTGCTAAATAGAAAGTAGCATAATTGCGGAAATTAATTTACTGGCAACTTAAGAGGTAACCTTAGAGAGTGA
ATG---GACCACCAGCTCAGAACTTATAACAGTAAATATAGATATAGAAACTTATCACACAGTTTGTGGTATCCACTTCT
AGCATGAGC--GTGAACAAGAACTGG-GCATCTATAATGATATGGTAGTCCAATTTCAACGGACTCTGCACTGGAACCCC
AAACAGCGATGGCCAGTTTGGGGCTTGGCTTGTACTAGACCACTAGGGTTTATCCACCCATACACTGACTACCGCGACAG
AGCAATTCCCGACAGCGCGTGCATCTGCATCCAACCAGCGACAGGAACCATCGCAACAAAGCAATTCGCGATGAAACCGC
GCAAACTCCTCCAGCAGGCTCAACCTTTCCCAGAAAATCCAAGAGAGAAAACGAGGGCTCACTCGTAATTTCGCAGGGAG
TTGGATCCTCTCTGCCGTCGGACGGCGGGCGGGCGAGGACGATGGGCAAAGGGGAAGTCTCGGCGTCGTCTGCGGTCGTC
TCGAACGACACGGCGTCCTCGACCGCGGCGCCTCCGGCTGGGGCCCAGGTGCTAGTCGCCGTCCATGGCCTCCCCGGCTC
GCCTCCCGATCCCGATCCCGATCCCTTTCCCGGTGTCCCCATCGATCGTGGTCGCAGCCGGCCGCCGCTTGCGCGGAGAC
GGTGGGTATCGGCGGTGGCGTACCGGTGGTGTTCGCCGTTGGTCGCCTCGCTCACTTCCGGATTCCGCGAGCGCTCGCTC
GGTACGCGAATCTGGTGCGGGATCTGGTCTTACGGGCCCTCGAAGCGAAGTGTAGAAGATTTGGGTTGGCCGG-------
---GTCCTACCGTTAGGCCTGT---AAATGACGCCGACTCAACCTATGGGCCTCCCGCGTTTTGGGCTTCGGCCCGTTTT
CAAATCGTTATCCACACCGCGAATGCTCCACCACCGCAGCTGCGGACGATGCTTCCCGAGCGCGGACGGCAAAGAGGATG
CAGCTCCGCTTCCTCCCGTTCGCCGCGAGCGCCGTGGCCGGAAGGAGCTTCCTCGCCGCTATTCCTCGGCCAGTGACGGA
GAGAAGGACGCACCTACGCTGCAACGCGGGCAACTCCTCGTCGTCGTCGGAGGACGAGGGCGGCGAGCTTAGCGCGGCAG
AAGAGGCGCTGCGGCGGCTGGCGGAGCTCGACGCCCAGCTGGAGGGGCTGAAGGAGCCTAAGATGAGGCCGCCGCCGCCC
CCTCCTCCCCCGGGTAATCATTTTCTTTT-CCCACCCCGTTCTCCTCGTGCCAAATTGCCTGCCTCTCCGGTTTTCCATG
CGTCCATGCTCCCCTGTCCTCCCATTCAATCAGTCGTCTAGAGTTCGAGATCTTCATCGCGGCCAATAATAATTGATTCA
TGTCAAGTTCGCCGTTCGCGCGTT---TGGAATGAAAATTTA---G-TGGGCTGCCTAACCTACGGAGAAGAGATGAATC
GATCTTCAA-----TACTCTGAAACAACT---------------------------------------------------
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>chr2B_1697
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--------------------------------------------TAGAGCAATGCTTCTAGATATACCAAGCCACAGTGA
TCCGTAGCGTCAATTCGTCGGTTGCTAAGCAACGACAGCACATTGATGCTCAAGTCACTTCCTACTTTTCCTAGGGCAGT
ACTGTGTGCTTGCTAGCATAGCATGTACTCCTATGGAAGTAC----------------TTCTCGTCATAGTCCATGCCAT
TGCTTAA-------------------------------------------------------------------------
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-----------------TTTGCCTGCTTGATCACTTCT-------CTGCTAACTTCTCTGTGTGGGTACTTGTGTATTTA
CTATGTTCAATTTTGTTAGCACAGATCCTTTCATGGACCGCGATATGATCATACAGCGAGGACGCCCAAGTGATGAGCTC
CCAGAAATGACCCCGGCCTACGTAACGTTCTCGACTCTGGCAATTTTTATCCTGACCATCTTCACCAACGTGGTGTTCAA
CGTGTACATCAAGCCTTCCGTGGACGGCGCCGATCGGCCGGTAAGAATCCAGAGAGTGCCTCTGGCTGATCCTAGCTTCC
AGCAGCCCGGCAATTCTAGTGGTAGCTCGTAGACATATATGCACGACACGATAATACAGTTTGATAGATACAGTGGGGAA
GGGCTGTGCTTTGCAAGTTAACTCAAGTCATGTGCCTC-------ATATTTGCATCATGAT-------------------
-----------------------------------------GATGTATTTAACACAATAACACCCACATGCTCCAAACGA
GCTATGTT-TTGCTGGCCTCCACATTGAGGG----TTTCATTATGGAACAAGGTGCTGCA-CATGTGTCCATGGGGCTTC
ACCTGGTATATGTATATCCTTTTTTCTTTTCATTCGATTAGCAGCTTCCATCGACTCAATGATGATCAATCAATTACATT
CAGCAGCACAATGATCTCCTGGATCGAATACATCAGACCCAACTTGTGAACCAGTTAATTGTATCAGTGGT-------GA
CGCTAGACATGGAGAGCAAATTGCCTCTTCTCTCGCACTAATCAGCCAATGGCGAGGCAAATTGTTTGCAGCAACATGCA
TATGCTGATGCCAAAATTCCAAAAACGCCGACATGGATGAGCTGTGGACAATGGTCGTGCGGCACGCGACAGAGGCGGAG
CGGCAGGGTACGTAGCGTACGCCCGTGGTAGCGGTCCCGGGCTCTGCGATCTTCTACTGTGTCGCTACTGGTTTTTTCTT
GCAGCTGTCTACAAATTCATATGGAGTACTGTACTGTATTTCTTTGTCTCTCTTGATTTAATTTTTCTCTCGTTTGTTGT
ATTTGCCTTGTTTCGTCCGGATTATACACCGGCTCTGCTCTACCCTGTCGGCAGTTCTCGAGTTGCCGTAAAGATCACAC
AGCTTTCTCGTTGGCTTTCGCTTTCCCTATGCAAGATTCTCGGTTGCTTTCCTCTCGTAGACACAGTACATCTTG-----
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>SNPs
-----------------------------------S----------------------------S---------------
------S--------------------------SS-SSSS------------------S---------------------
--------------------------S--------S-------S-----------------------------------S
---------------------------------S-----------------------------S--------S------S
--------------------------------------------------------------------------------
--------------S------S---------------------------------SS------------S----------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------S-----
----S-------------------------S-------------S---S----------------------S--------
---------------------S----S-----------------------------------------------------
------------------------------------------S--------------------------------S----
-----------------------------------------------------S------S-------------------
---------------------------------------S------------------------S---------------
-----S----S------------------------------------------S-----------------S--------
--------S----------------------------------------------------S------------------
--------------------------------------------------------------------------------
-----------------------------S-----S--------------------------------------------
-----------------------S---------------------------------S----------------------
S---------------------------S-------------SSS-----------------------------S-----
---------SSSSS-------------------------S--------------------------SSSSS---------
------------------------S---------------------SS-------------------SS--SSS-SSSSS
SSSSSSSSS----S------S---S--S--------------------S--------------S--SSSSSSSSSSS---
--------------------------------------------------S-----------------------------
-----------------S--------------------------------------------------------------
--S----------S------------S--------------SSSSSSSSSSSSSSSSS-S------S-S---SS------
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--------------------------------------SSSSSSS-----------------------------------
--SSSS-SSSS---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
---------------------S------------S--------S----------------------S-SSSSS-------
-----------------------S---S----------SSSSSSS--------SS---S--SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-----------------S-
---S--S-S-----------SS-S-------SSSS-S-------------------------------------------
-------S-----S----------------------------S-------------------------------------
--------------------------------------------------------------S--------------S--
----S-------------------------------------------------S------S------------------
-----------------------------------------------S--------------------------------
---------------------------------------------------------------S----------------
-----------------------S---------------------------------------------S----------
----S------------------------S-S-S-----S--S-S-----------------------------------
------------------------------------------S--------------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS
>forward_313
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-----------------------------------------------------CCACCCATACGCTGACTACG-------
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>reverse_1689
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--------GTTACGGAATGCGCAGGAAC----------------------------------------------------
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>forward_934
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----------------------------------CGACTCAACCTATGGGCCTT--------------------------
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>reverse_1987
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------------------------------------------------------------------GTGGTCACAGTCCA
TGCCAT--------------------------------------------------------------------------
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>forward_1975
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-----------------------------------GAAGTAGTCCCGCCGTTTCA-------------------------
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>reverse_3632
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-------------------------------CCCCTGCTATAGCTTGTCGG-----------------------------
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