>input_sequence_57198
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-----------ATGGGCAAAGTGCCATCACAGAAGGACCTCTTTGAGGTTTCAGGTCCTACCTATTTGACATACGTTAAT
TGGTAAGTTTTTGACAATTTTCATCGTTGAAATCAACTAGGAATAATAACGGCATCATGATTTTGCTATGGTTTACTATG
AGCAAAAGATTCCGGGAACAGAAGAAAAGAGGAGCCTGCATTGGCAAATGCCGCTGATCTGATCACCTTTGCCATTTGAT
GATTTGCTCCGATCAGGAACTGCCCACACCACCAGCGATCGGCCATGGCGAGCCTCGTGCAAGGCGTGTACGTCCTGGAG
CGTGACCGGCAACGGAACCGCCAGGGCCCCGACGCCCGCGCGCCGGCGTGGTGGAAGTTCTTCAACTTCGAGCTGCGGCA
GGCGCTCGTGGACGCCGCCGACTCCTCCATCTTCGGCGCGGTGTACGCGTTCCAGCCGCCGTACCACCTCATCGACCCAG
CGGCGGCCGCCAGCGCGCCGCACTACGTCGTCGCCTTCCGAGGGACCGTCACCAAGAAGGCCTCGGCGTCCAGGGACCTC
GAGCTCGACCTCCTGCTCGTCCGGAGCGGCATCGAGCACACCTCCCGCTTCCGCATCGCGATGCAGACCATCCACGACGT
CGTGGTTGCCGCCGGGGCGGGGCACGGCCGCGTCTGGCTGGCCGGCCACTCGCTGGGGTCCGCCATCTCAACCCTCGCCG
GAAAGACCATGGCCCGGGCGGGCGTCGTCCTCACCACATTCCTCTTCAACGCGCCGTTCCTGTCGGCGCCGGTGGAGAGG
ATCCCGCACAAGAAGGTGAAGCAGGGCATCCGCATCGCCAAGAGCTTCGTCACGGCCGGGGTGGTCACCGTCCTGCACAA
GAGCGGCGGCAGCAGCGACGAAGCCTTCGCGGCGCTGGCGCGGTGGGTGCCGAACTTGCTGGTGAACCCGGCGGACCCCA
TCAGCGCGGAGTACGTGGGGTACTTCGACCACCGCAAGAAGATGGAGGACATCGGCGCGGGCGCCGTCGGGAGGCTGGCC
ACGAGGCACTCGGTCAAGGACCTGCTTCTGGGCATCGGCAAGCCGGAGGGCTGCGAGCCGCTGCACCTGTTCCCTTCGGC
CGTCCTGACGGTGAACCGCGGCCCGTCGCCGGACTTCAAGTCGGCCCACGGGATCCACCAGTGGTGGCGGCCGGACTTGG
CCCTGGAGTGCAGGGCCTATTCCTACGCTTGA------------------------------------------------
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-----------------------------
>chr3D_1_TraesCS3D01G287900
TGAACCACACTTTATATGCGTTACGTAGGCTGTCAATACGGTGTGTGTGCTAGAGTTGCTCTTAAAGAACATATGAGTTG
AGTAAGAGACATCAAGTGTTAAGAGATCATCCCTTCTCTTAGTTAAGAGAATGCATACCCTTTT-CTGATTTTTCAATTC
TCCAAGTCAGCATTTATCGCCTTTT-TTCGGCAC--TATATCTCCCTGTTTTATAAAG---TAAGCATTTAAAGAGGCAA
TCCAAACTTGCATCCAATCATTT----------------AAAGAGGATGTGCAAATCTGCATTTAAGGAGGCACTCCTAA
ATTGGCATCCAAGCATTACCCAGCCGGTGTATCATCGAAAGAAGATGCATATCAAGTAATATTGCGC-------------
-------------AAATCTGCATCCGGGAAGTGGTGTGCGTCTTGTTATTTAAGCCACTTGTGGTGCGCCCAGCTGTACA
AGATGGAAGACTTCGTGCTCCTAACCTCAAAGTCTTCTCTTTCGCCTCTTCAAGCACCATTTCTTAACTCCTCCAGCCCT
TGGTCAGCCCGAATAATT-TTTTTGCCAATCAGTTAGATGCTCTGGCTTGTTGCCCAAACAAGAGCATGAATCCCATTCA
GAGTCCAGAGAGAGCAACGAGGGAGAGGATGCCGCCGCGCCGAGCATGATATGATATTGAAGAAGAAATTTCTCTGGTAA
TCTTCTGCCTCCCTTTTCCGGATTCATGATTCACACTCTCATATCACGGGTGCAGTGTTGATCATGAGTTCTTGTGGAAT
GTGGGTTTATGGGATCGAGTGACTTCATTTTGCGTTCTGAATAAATCTGAAAATGTACCTTGGGATGCTTTGCTTATATT
TTCCTCTGAACTTGTCCACTG-CCCATATTCCAAGAGTATCATGGTTGGAGACCTGAATTGTCTTTGACAGTTATATCTT
TGTAAGATTGATGTTGTCTCACGTTTAGTATGCACATTTCATTTTCGTGTACAGAGCAACCTTCTGGCTAATCTGATCCA
CTGGGGCAAAGATGGGCAAAGTGCCATCACAGAAGGACCTCTTTGAGGTTTCAGGTCCTACCTATTTGACATACGTTAAT
TGGTAAGTTTTTGACAATTTTCATCGTTGAAATCAACTAGGAATAATAACGGCATCATGATTTTGCTATGGTTTACTATG
AGCAAAAGATTCCGGGAACAGAAGAAAAGAGGAGCCTGCATTGGCAAATGCCGCTGATCTGATCACCTTTGCCATTTGAT
GATTTGCTCCGATCAGGAACTGCCCACACCACCAGCGATCGGCCATGGCGAGCCTCGTGCAAGGCGTGTACGTCCTGGAG
CGTGACCGGCAACGGAACCGCCAGGGCCCCGACGCCCGCGCGCCGGCGTGGTGGAAGTTCTTCAACTTCGAGCTGCGGCA
GGCGCTCGTGGACGCCGCCGACTCCTCCATCTTCGGCGCGGTGTACGCGTTCCAGCCGCCGTACCACCTCATCGACCCAG
CGGCGGCCGCCAGCGCGCCGCACTACGTCGTCGCCTTCCGAGGGACCGTCACCAAGAAGGCCTCGGCGTCCAGGGACCTC
GAGCTCGACCTCCTGCTCGTCCGGAGCGGCATCGAGCACACCTCCCGCTTCCGCATCGCGATGCAGACCATCCACGACGT
CGTGGTTGCCGCCGGGGCGGGGCACGGCCGCGTCTGGCTGGCCGGCCACTCGCTGGGGTCCGCCATCTCAACCCTCGCCG
GAAAGACCATGGCCCGGGCGGGCGTCGTCCTCACCACATTCCTCTTCAACGCGCCGTTCCTGTCGGCGCCGGTGGAGAGG
ATCCCGCACAAGAAGGTGAAGCAGGGCATCCGCATCGCCAAGAGCTTCGTCACGGCCGGGGTGGTCACCGTCCTGCACAA
GAGCGGCGGCAGCAGCGACGAAGCCTTCGCGGCGCTGGCGCGGTGGGTGCCGAACTTGCTGGTGAACCCGGCGGACCCCA
TCAGCGCGGAGTACGTGGGGTACTTCGACCACCGCAAGAAGATGGAGGACATCGGCGCGGGCGCCGTCGGGAGGCTGGCC
ACGAGGCACTCGGTCAAGGACCTGCTTCTGGGCATCGGCAAGCCGGAGGGCTGCGAGCCGCTGCACCTGTTCCCTTCGGC
CGTCCTGACGGTGAACCGCGGCCCGTCGCCGGACTTCAAGTCGGCCCACGGGATCCACCAGTGGTGGCGGCCGGACTTGG
CCCTGGAGTGCAGGGCCTATTCCTACGCTTGATCGGCT---------GGAATATAAGGCAAACCTCCTTTGGATCCTGGT
TCT---AGAAACTGAAACTCGAAAATGATTTGTGTTGGCTGGAGAGCCTGAAACTGTCAACGCAGAAGAGAAGACAAGAT
TTATAC--------TAATTTTGAACTTTTGATTCAAGGCATGCCCAGTAGCATACTTTGAG-------------------
--------------------------------------------------------------------------------
-----------------------------------------------CAGAGATCATAAACCTTGGGGCTTGGGCATCTC
CTGCCTGGATGCATAGTCGACATTTCCTCATGATCCAGCAACATCAGGGGTCCAACAAGTACAACCTCAAAGCAGAGCTC
ACTGTGCTGACATGACTGAACTTGGAGCCGACGGCGAACCAGTTCAGAAATAGATTCAGACTGCAGAATACTCATCTAAC
CCCTTTTAATCTGAGATAATTACACGATAGTACCACATTCGGGGCGGTGGTGGTGAATTGGTACAAAGTTTGGTAATTTT
TACGTGT-AGTACCAAGTTTGGGGCGAACCGTTGCAAATCGAGCTAAGCTTCGTATTTC---TACGTATTGACGCTGGAA
CTGACCGCCCGGGCTCGCGCGTCAGCTGCCATGCTGGCGAATCGGCACCTGCCCGCTCGCTCGATTGGTGCAGTCCGGCT
CGAATCGGACCGGCCCGTGCTCCACTCTC-------TCCCTCGTCGCTCGTGCCTCCCTCCTCGCTCCTCTCTCG-----
-------CCGCCCGCAGCATTGCCGGACCGGACCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAA-GCAGTGAGGAGAC
ATCCAGCCTGCCGTGCATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGAGTTTCCTTGAG------CTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGTTTGTATGAGCTTCT
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGATCTGATTTCCCCATGTGAGAAGCACGACA
TGGCATCTGAGAGGCTTGTTGCCTTTGAA
>chr3A_125
--------------------------------------------------------------------------------
--------------------------------------------AAGAGAATGCATACCCTTTTTCTGATTTGTCAATTT
TCCAAGTCAGCAATTATCGGCTTTTTCGGCACCATATCTATCTCCCTCTTTTAT-------TAAGCATTTAAAGAAGCAA
TCCAAACTTGCATCCAATCATTAGTTGTAGTACACAGGGAAGGAA-ATGTGCAAATCTGCATTTAAAGAGGCACTCCAAA
ATTGGCATCCAAGCATTACCCGGCTGGTGTATCATGGAAAGAAGATGCATATCAAGTAATATTGCAC-------------
-------------AAATCTGCATCCGGGAAGGGGTGTGCGTCTTGTTATTTAAGCCACTTGTGGTGCGCCCAGCTGTACA
AGAGGGAAGCTTTCGTGCTCCTAACCTCAAAGTCTTCTCTTTCGCCTCTTCAAGCACCATTTCTTAACTTCTCCAGCACT
TGGTCAGCCCGAATAATT-TTTTTGCCAATCAGTTAGATGCTCTGGTTTGTTGCCCAAACAAGAGTATGAATCCCATTCA
GAGTCCAGAGAAGGCAACGAGGGAGAGGATGCCGCCGCGCCGAGCATGATATGATATTGAAGAAGAAATTTATCTGGTAA
TCTTCTGCCTCCCTTTTCTGGATTCATGATTCACACTCTCATATCACGGGTGCAGTGTTGATCACGAGTTCTTGTGGAAT
GTGGGTTTATGGGATCGAGTGGCTTCATTTTGTGTTCCGAATAAATCTGAAAATGTACCTTGGGATGCTTTGCTTATATT
CTCCTCTGAACTTGTCCACTGTCT-ATATTCCAAGAGTATCATGGTTGGGAACCTGAATAGTCTCTGACAGTTATATCTT
TGTAAGATTGATGCTGTCTCACGTTTAGTATGCATATTTCATTTTCGTGTGCAGAGCAACCTTCTGGCTAATCTGATCCA
TTGGGGCAAGGATGGGCAAAGTGCCGTCACAGAAGGACATCTTTGAGGTTTCAGGACCTACCTATTTGACATACGTGAAT
TGGTAAGTTGTTGACAATTTTCATCGTTGAAATCAACTAGGAATAATAACGGCATCATGATTTTGCTATGGTTTATGAA-
--CAAAAGATTCCGGGAACAGAAGAACAGAGGAGCCTGCATTGGCAAATGCCGCTGATCTGATCACCTTTGCCATTTGAT
GATTTGCTCCGGTCAGGAACTGCCCACACCACCAGCGATCGGCCATGGCGAGCCTCGTGCAAGGCGTGTACGTCCTGGAG
CGCGACCGGCAGTGGAACCGCCAGGGCCCCGACGCCCGCGCGCCGGCGTGGTGGAAATTCTTCAACTTCGAGCTGCGGCA
GGCGCTCGTGGACGCCGCCGACTCCTCCATCTTCGGCGCGGTGTACGCGTTCCAGCCGCCGTACCACCTCATGGACCCCG
CGGCGGCCGCCAGCGCGCCGCACTACGTCGTCGCCTTCCGAGGGACCGTCACCAAGAAGGCCTCCGCGTCCAGGGACCTC
GAGCTCGACCTCCTGCTCGTCCGGAGCGGCATCGAGCACACCTCCCGCTTCCGCGTCGCGATGCAGACCATCCACGACGT
CGCGA---------------GGCACGGCCGCGTCTGGCTGGCCGGCCACTCGCTGGGGTCCGCCATCTCAACCCTCGCCG
GAAAGACCATGGCTCGGGCGGGCGTCGTCCTCACCACATTCCTCTTCAACGCGCCGTTCCTGTCGGCGCCGGTGGAGAGG
ATCCCGCACAAGAAGGTGAAGCAGGGCATCCGCATCGCCAAGAGCTTCGTCACGGCCGGCGTGGCCACCGTCCTGCACAA
GGGCGGCGGCAGCAGCGACAAAGCCTTCGCGGCCCTGGCGCGGTGGGTGCCGAACGTGCTGGTGAACCCGGCGGACCCCA
TCAGCGCGGAGTACGTGGGGTACTTCGACCACCGCAAGAAGATGGAGGACATCGGCGCGGGCGCCGTCGGGAGGCTGGCG
ACGAGGCACTCGGTCAAGGACCTGCTGCTGGGCATCGGCAAGCCGGGCGGCTGCGAGCCGCTGCACCTGTTCCCTTCGGC
CGTCCTGACGGTGAACCGCGGCCCGTCGCCGGACTTCAAGTCGGCGCACGGGATCCACCAGTGGTGGAGGCCGGACTTGG
CCCTGGAGTGCAGGGCCTATTCGTACGCTTGATCGGCT---------GG---------CAAACCTCCTCTGGATCCTGGC
TCTCGTAGAAACTGAAACTCGAAAATGATTTGTGTTGGCTGCAGAGCCTGAAACTGTCAACGCAGAAGAGAAGACAAGAT
TTATACTACTACTGTAGTTTTGAACTTTCGATTCAAGGCATGCCCAGTAGCACAACTTTTAAGATTTATTTCACATGAAT
TCATTAAAAAAAAGCACGTTCGTATAGAACATCACCCACTGACAAACAACCACCACTGTATATTCCTTCTTTTCCGGATA
GGTCCATGGCAGACACGCTCTACTATACAGGCACCACTTGTCCATGCCATAGATCATAAACCTGCTT-------------
--------------------------------------------------------------------------------
-CTGTGCTGACATGACTCAACTTGGAGCCGACGGCGAACCAGTTCAGAAATAGATTCA----------------------
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-----------------------------
>chr3B_130
--------------------------------------------------------------------------------
-------------------------------------------------AATGCATACCCTTTTTCTGATTTGTCTCTTT
TCCAAGTCAGCAATTATCAGTTTTTTTTCAGCAC--CATATCTCCCTGTTTTATTATTAAATAAGCATTTAAAGAAGCAA
TCCAAACTTGCATCCAATCATTAGTTGTAGTACGCAGGGAAAGAAGATGTGCAAATCTACATTCAAAGAGGCACCCCAAA
ATTGGCATCCAAGCATTACCCAGTTGGTGTATCATGGAAAGAAGATGTATATCAAGTACTAATATTCATACGCTCCTAAG
CGTATTCGTGAAGAAATCTGCATCCAGGAAGTAGTGTGCGTCTTGTTATTTAAGCCACTTGTGGTGCGCCCAGCTGTACA
AGAGGGAAGACTTCGTGCTCCCAACCTCAAAGTCTTCTCTTTCGCCTCTTCAAGCACCATTTCTTAACTTCTCCAGCCCT
TGGTCAGCCCGAATATATATTTTTGCCAATCAGTTAGATGCTCTGGTTTGTTGCCCAAACAAGAGTATGAATCCCATTCA
GAGTCGAGAGAGAGCAACGAGGGAGAGGATGCCGCCGCACCGAGCATGATACGATATTGAAGAAGAAATTTCTCTGGTAA
TCTTCTGCCTCCCTTTTCTGGATTCATGATTCACACTCTCATATCACCGGTGCAGTGTTGATCATGAGTTCTTGGGGAAT
GTGGGTTTATGGGATCGAGTGACTTCATTTTGTGTTCTAAATAAATCTGAAAATGTACCTTGGGATGCTTT---------
-TCGTCTGAACTTTTCCACTG-CT-ATATTCCAAGAGTATCATGGTTGGAGACCTGAATTGTCTTTGACAGTTATATCTT
TGTAAGATTGATGCTGTCTCACGTTTAGTATGCACATTTCATTTTCGTGCACAGAGCAA-------------------CA
TTGGGGCAAGGATGGGCAAAGTGCCGTCACAGAAGGACCTCTTTGAGGTTTCAGGGCCTACCTATTTGACATACATGAAT
TGGTAAGTTGTT--CAATTTTCATCGTTGAAATCAACTAGGAAAGCAAAAAATTG-------------------------
------------CGGGAACAGAAGAAAAGAGGAGCCTGCATTGGCAAATGTCG-----CTGATCACCTTTGCCATTCGAT
GATTTGCTCCGGTCAGGAACTGCCCACACCACCAGCGATCGGCCATGGCGAGCCACGTGCAAGGCGTGTACGTCCTGGAG
CGCGATCGTCAATGGAACCGCCAGAGCCCCGACGCCCGCGCGCCGGCGTGGTGGAAGTTCTTCCACTTCGAGCTGCGGCA
GGTCCTCGTGGACGCCGCCGACTCCTCCATCTTCGGCGCGGTGTACGCGTTCCAGCCGCCGTACCACCTCATCGACCCCG
CGGCGGCCGCCAGCGCGCCGCACTACGTCGTCGCCTTCCGAGGGACCGTCACCAAGAAGGCCTCCGCGTCCAGGGACCTC
GAGCTCGACCTCTTGCTCGTCCGGAGCGGCATCGAGCACACCTCCCGCTTCCGCATCGCGATGCAGACCATCCACGACGT
CGTGGTGGCCGC------GGGGCACGGCCGCGTCTGGCTGGCCGGCCATTCGCTGGGGTCCGCTATCTCAACCCTCGCCG
GAAAGACCATGGCCCGGGCGGGCGTCGTCCTCACCACATTCCTCTTCAACGCGCCGTTCCTGTCGGTGCCGGTGGAGAGG
ATCCCGCACAAGAAGGTGAAGCAGGGCATCCGCATCGCCAAGAGCTTCGTCACGGCCGGCGTGGCTACCGTCCTGCACAA
GGGCGGCGGCAGCAGCGACGAAGCCTTCGCGGCGCTGGCGCGGTGGGTGCCGAACGTGCTGGTGAACCCGGCGGACCCCA
TCAGCGCGGAGTACGTGGGGTACTTCGACCACCGCAAGAAGATGGAGGACATCGGCGCGGGCGCCGTCGGGAGGCTGGCT
ACGAGGCACTCGGTCAAGGACCTGCTGTTGGGCATCGGCAAGCCGGGCGGCTGCGAGCCGCTGCACCTGTTCCCTTCGGC
CGTCCTGACGGTGAACCGCGGCCCGTCGCCGGACTTCAAGTCGGCGCACGGGATCCACCAGTGGTGGAGGCCGGACTTGG
CCCTGGAGTGCAGGGCCTATTCCTACGCTTGATTGGCTGAAATATAAGG---------CAAACCTCCTTTGGATCCTGGT
TCT---AGAAACTGAAACTCGAAAATGATTTGTGTTGGCTGCAGAGCCTGAAAATGTCAACGCAGAAGACAAGACAAGAT
TTATACTAC-----TAGTTTTGAACTTTTGATTCAAGGCATGCCCAGTAGCATACTTTGAG-------------------
--------------------------------------------------------------------------------
-----------------------------------------------CAGAGATCATAAACCTTGGAGCTTGGGCATCTC
CTGCCTGGATGCATAGTCGACC-------------------CATCAGGGGTCCAACATGTACAACCTCAAAGCAGAGCTC
ACTGTGCTGACATGACTGAACTTGGAGCCGACGGCGAACCAGTTCAGAACAAGATTCAGACTGCAGA-------------
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>chr3A_2595
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-----------TGAGTTAATTACACGATAGTACCACAATTGGGGCCGTGGTGGCGAATTGGTACTCGTTTTGAAAATTTT
TACGTGTCAGTACCACGTTTGGACCGAACCGTTGCAAATCAGGCTAAACTTCGTATTTG---TACGTATTGACGCTGGAA
CTGACCGCCCGGGCCTGCGCGTCAGATGCCACGCTGGCGAATCGGCACTCGCCCGCTCGCTCAATAGGTGCGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCCACTCTG-------TTCCTCCTCGCTCCTGCCTCCCTCCTTGCTCCTCTCTCGTCGCC
CTCGTCACCGCCGGCAGCTTTGCCGGAGCGGAGCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTTCCTTGAGCTAGGTCTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGATTGTACGAGCTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr3A_2595
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-----------TGAGTTAATTACACGATAGTACCATAATTGGGGCGATGGTGGCGAATTGGTACCACTTTTGAAAATTTT
TACGTGTCAGTACCACGTTTGGGTCGAACCGTTGCAAATCGGGCTAAACTTCGTATTTCTACTACGTATTGATGCTGGAA
CTGACCGCCCGAGCCCGCGCGTCAGCTGCCACGCCGGCGAATCGGCACCCGCCCGCTCGCTCGATAGGTGCAGTCCGGCT
CGAACCGGACCGACCCGTGCTCTG-TCTCCACTCTCTTCCTCCTCGCTCGTGG-------CTCCCTCCTCTCTCGCCGCC
CTCGTCGCCGCCCGCAGCATTGCCGGACAGGACCGCCG-CCGCCCGCCATGGTTTTCAAAGACGAAAGCAGTGAGGACAC
GTCCAGCCCGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTTCCTTGAGCTAGGTTTAGGGT
TAGGGTTTTAGATTTGGGGTTTTTTGATCTGGTTGATTTCGCTAAGTTTTGATTTGGGCATTCTGTTTGTACGAGCTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCTGGGGCTTGAGCTGGAAATGAAGTCGCCATGTGAGAAGCACAGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr4D_2595
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-----------TGAGATAATTACACGATAGTACCACATTTGGGACGGTGGTGGCGAATTGGTACCACTTTTGAAAATTTT
TACGTGTCAGTACCATGTTTGGGTCGAACCGTTGCAAATCGGGCTAATCTTCGTATTTCTAC---GTATTGACGCTGGAA
CTGACCGCCCGGGCCCGCGCGTCAGCTGCCATGCTGGCGAATCGGCACCCGCCCGCTCGCTCGCTACGTGCAGTCCGGCT
CGAACCGGACCGGCCCGTGCTCTG-TCTC-------TCCCTCCTCGCTCGTGCCTTCCTCCTCGCTCCTCTCTCGCCGCC
CTCGTCGCCGCCCGCAACGTTGCCGGACCGGACCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGAGAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGGCGGGCTTAACCAGGTGATTTCCCTTGAGCTAGGTTTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTTGCTGGGTTTTGATTTGGGCATTTTGTTTGTATGAGGTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGGGA
AGGCATCTGGGAGGCTTGTCGCATTTGAA
>chr6D_2595
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-----------TGAGTTAATTACACGATAATACCACATTTGGGGCGGTGGTGGCGAATTGGTACCATTTTTGGTAATTTT
TACGTGTCAGTGCCACGTTTGGGGCGAACCGTTGCAAATCGGGCTAAACTTCGTATTTCTAC---GTATTGACGCTGGAA
CTGACCGTCCGGGCCCGCGCGTCAGCTGCCACGCTGGTGAATCGGCACCCGCCCGCTCGCTCGATAGGTGCGGTCCGGCT
CGAACAGGACCGGCTCGTGCTCCACTATC-------TTCCTCCTCGCTCGTGCCTCCCTCCTCGCTTCTCTCTCGTCGCC
CTCGTCGTCGCCCGCAGCGTTGCCGGACCTGATCGCCG-CCTCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGACAC
GTCCAGCCTGCGGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAAGTGATTTTCCTTGAGCTAGGTTTAGGGT
TAGGGTTTCGGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTCGCTTTTGATTTGGGCATTTTGTTTGTACGAGCTTCG
GCAGGTCCCTTTGAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCACCATGTGAGAAGCACGGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr3D_2596
--------------------------------------------------------------------------------
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------------GAGATAATTACACGATA-TACCACATTTGGGGCGGTGGTGGCGAATTGGTACCACTTTTGAAAATTTT
TACGTGTCAGTACAACGTTTGGGTCGAACCGTTGCAAATCGAGCTAATCTTCGTATTTCTAC---GTATTGACGCTGGAA
CTGACCGCCCGGGCCCGCGCGTCAGCTGCCACGCTGGCGAATCGGCACCCACCCGCTCGCTCGATACGTGCGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCTG-TCTC-------TCCCTCCTCGCTCGTGCCTTCCTCCTCGCTCCTCTCTCGCCGCC
CTCGTCGCCGCCCGCAGCGTTGCCGGACCGGACCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGAGAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCTACGGACGGGCTTAACCAGGTGATTTCCCTTGAGCTAGGTTTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTTGCTGGGTTTTGATTTGGGCATTTTGTTTGTATGAGGTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGTCATGTGAGAAGCACGGGA
AGGCATTTGAGAGGCTTGTCGCATTTGAA
>chr3B_2596
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------------GAGTTAATTACACGATAGTACCACAATTGGGGCCGTGGTGGCGAATTGGTACTC-GTTTTGAAATTTT
TACGTGTCAGTACCACGTTTGGACCGAACCGTTGCAAATCGGGCTAAACTTCGTATTTGTAC---GTATTGACGCTGGAA
CTAACCGCCCGGGCCCGCGCGTCAGACGCCACGCTGGCGAATCGGCACTCGCCCGCTCGCTCAATAGGTGTGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCCACTCTG-------TTCCTCCTCGCTCCTGCCTCCCTCCTTGCTCCTCTCTCGTCGCC
CTCGTCACCGCCGGCAGCTTTGCCGGAGCGGAGCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTTCCTTGAGCTAGGTCTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGATTGTACGAGCTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr3B_2596
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------------GAGTTAATTACAAGATAGTACCATATTTGAGGCGGTGGTAGCGAATTGGTATCAAGTTTGGCAATTTT
TACGTATCAGTATCAAGTTTGGGGCGAACCATTGCAAATCGGGCTAAACTTCGTATTTCTAC---GTATTGACGCTGGAA
CTGACCGCCTGGGCCCGCGCGTCAGCTGCCACGCTGGCGAATCGGCACCCGCACGCTCGCTCGATAGGTGCGGTCCGTCT
CGAACCGGACCGGCCCGTGCTCCACTCTCCG-------------------------CCTCCTCGCTCCTCTCTTGCCGCC
CTCGTCGCTGCCGGCAGCTTTGCCGAACCGGACCGCCG-CCGCCCGCCATGGTTTTCAAAGACGAAAGCAGTGAAGACAC
GTCCAGCCTACCGTACATGCACTCGACCTCATCCACAGACGAGCTTAACCAGGTGAGTTTCCTTGATCTAGGTTTAGGGT
TAGGGTTTCAGATTTGGGCCTTTTTGATTTGGTTGATTTCGCTGGGTTTTAATTTGGCCATTTTGTTTGTACGAGCTTCT
GCAGGTCCCTTTCAGCGTTGAAGATTCAGATTACCAGGGGTTTGAGCTGGATATGATGTCCCCATGTGAGAAGCACGAAA
AGGCATCTGAGAGGCTTGTCGCATTTG--
>chr4D_2596
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------------GAGATAATTACACGATAGTACCATATTTGGGGCGATGGTGATAAATTGGTACCAAGTTTGATAATTTT
TACGTGTCAGTACCAAGTTT-GGGCGAACCGTTGCAAATCGGGCTAAACTTCGTATTTCTAC---GTATTGACGCCGAAA
CTGACCGCCCAGGCCCGCGCGTCAGCTGCCACGCTAGCGAATCGGCACCCGCCCACTCGCTCGATAGGTGCGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCCACTCTC-------TCCCTCCTCGCTCGTGCCTCCCTCCTCTCTCCTCTCTCGCCGCC
CTCGTCGCCGCCCGCAGCTTTGCCGGACCGGACCGCTGCCCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGAGTTTCCTTGAGCTAGGGTTAGGGT
TACGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGTTTGTACGAGCTTCT
GCAGGTCCCTTTCAGCATTGAAGATCCAGATTACCAGGGGCTTGAGCTGGATATGATGTCCCCATGTGAGAAGCACGGCA
AGGCATTTGAGAGGCTTGTCGCATTTGAA
>chr5A_2596
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------------GAGATAATTACACGATAGTACCACATTTGGGGCGGTGGTGGCGAATTGGTACCACTTTTGGAATTTTT
TACGTGTCAGTACCATGTTTGGGTCGAACCGTTGCAAATCGAGCTAATCTTCGTATTTCTAC---GTATTGACACTGGAA
CTGACTGCCCGGGCCCGCGCGTCAGCTGCCATGCTGGCGAATCGGCACCCGCCCGCTCGCTCGATATGTGTGATCCGGCT
CGAACCGGACCGGCCCGTGCTCTG-TCTC-------TCCCTCCTCGCTCGTGCCTTCCTCCTCGCTCCTCTCTCGTCGTC
CTCGTCGCCACCCGCAGTGTTGCCGAACCGGACCGCCA-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGAGAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTCCCTTGAGCTAGGTTTAGGGT
TAGGGTTTTAGATTTGGGGCTTTTTGATTTGGTTGATTTTGCTGGGTTTTGATTTGGGCATTTTGTTTGTATGAGGTTCG
GCAGGTCCCTTTTAGCATTGAAGATCTAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGGGA
AGACATCTGAGAGGCTTGTCGCATTTGAA
>chr4B_2596
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------------GAGTTAATTACACGATAGTACCACAATTGGGGCCGTGGTGGCGAATTGGTACCAGTTTCGAAAATTTT
TACGTGTCAGTACCACGTTTGGACCGAACCGTTGCAAATCGGGCTAAACTTCGTATTTGTAC---GTATTGACGCTGGAA
CTGACCGCTCGGGCCCGCGCGTCAGATGCCACGCTGGCGAATCGGCACTCGCCCGCTCGCTCAATAGGTGCGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCCACTCTG-------TTCCTCCTCGCTCCTGCCTCCCTCCTTGCTCCTCTCTCGTCGCC
CTCGTCACCGCCGGCAGCTTTGCCGGAGCGGAGCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTTCCTTGAGCTAGGTCTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGATTGTACGAGCTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGTCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr7B_2596
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------------GAGTTAATTACACGATAGTACCACAATTGGGGCCGTGGTGGCGAATTGGTACTCGTTTTGAAAATTTT
TACGTGTCAGTACCACGTTTGGACCGAACCGTTGCAAATCGGGCTAAACTTCGTATTTGTAC---GTATTGACGCTGGAA
CTGACCGCCCGGGCCCGCGCGTCAGATGCCACGCTGGCGAATCGGCACTCGCCCGCTCGCTCAATAGGTGCGGTCCGGCT
CGAACGGGACCGGCCCGTGCTCCACTCTG-------TTCCTCCTCGCTCCTGCCTCCCTCCTTGCTCCTCTCTCGTCGCC
CTCGTCACCGCCGGCAGCTTTGCCGGAGCGGAGCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTTCCTTGAGCTAGGTCTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGATTGTACGAGCTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr7B_2596
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------------GAGTTAATTACACGATAGTACCACAATTGGGACCGTGGTGGCGAATTGGTATCAGTTTTGAAAAAATT
TACGTGTTAGTACCATGTTTGGACCGAACCGTTGCAAATCGGGCTAAACTTTGTGTTTGTAC---GTATTGACGCTGGAA
CTGACCGCCCGGGCCTGCGCGTCAGATGCCACGCTGGCGAATCGGCACGCGCCCGCTCGCTCGATAGGTGCGGTCCGGCT
CGAACCGGACTGGCCCGTGCTCCACTCTG-------TTCCTCCTCGCTCCTGCCTCCCTCCTTGCTCCTCTCTCGTCGCC
CTCGTCACCGCCGGCAGCTTTGCCGGAGCGGAGCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTTCCTTGAGCTAGGTCTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGATTGTACGAGCTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr4A_2596
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------------GAGTTAATTACACGATAGTACCACAATTGGGGCCGTGGTGGCGAATTGGTACCAGTTTTGAAAAATTT
TACGTGTCAGTACCATGTTTGGACCGAACCGTTGCAAATCGGGCTAAACTTTGTATTTGTAC---GTATTGACGCTGGAA
CTGACCGCCCGGGCCCGCGCGTCAGATGCCACGCTGGCGAATCGGCACGCGCCCGCTCGCTCGATAGGTGCGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCCACTCTG-------TTCCTCCTCGCTCCTGCCTCCCTCCTTGCTCCTCTCTCGTCGCC
CTCGTCACCGCCGGCAGCTTTGCCGGAGCGGAGCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTTCCTTGAGCTAGGTCTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGCTTTGATTTGGGCATTTTGATTGTACGAGCTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr5B_2596
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------------GAGTTAATTACACGATAGTACCACAATTGGGGCCGTGGTGGCGAATTGGTACCAGTTTCGAAAAATTT
TACGTGTCAGTACCACGTTTGGACCGAACCGTTGCAAATCGGGCTAAACTTCGTATTTGTAC---GTATTGACGCTGGAA
CTGACCGCCCGGGCCCGCGTGTCAGATGCCACGCTGGCGAATCGGCACTCGCCCGCTCGCTCAATAGGTGCGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCCACTCTG-------TTCCTCCTCGCTCCTGCCTCCCTCCTTGCTCCTCTCTCGTCGCC
CTCGTCACCGCCGGCAGCTTTGCCGGAGCGGAGCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGATGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTTCCTTGAGCTAGGTCTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGATTGTACGAGCTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr5D_2596
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------------GAGATAATTACACGATAGTACCACATTTGGGGCGGTGGTGGCGAATTGGTACCATTTTTGGAAATTTT
TACGTGTCAGTACCACGTTTGGGTCTAACCGTTGCAAATCGAGCTAATCTTCGTATTTCTAC---ATATTGACGCTGGAA
CTGACCGCCCGGGCCCGCGCGTCAGCTGCCACGCTGGCGAATCGGCACCCCCCCGCTCGCTCGATACGTGCGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCTG-TCTC-------TCCCTCCTCGCTCGTGCCTTCCTCCTCGCTCCTCTCTCGCCGCC
CTCGT-------------------------------CG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGAGAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTCCCTTGAGCTAGGTTTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTTGCTGGGTTTTGATTTGGGCATTTTGTTTGTATGAGGTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCTCCATGTGAGAAGCACGGGA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr1A_2596
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------------GAGTTAATTAGACGATAGTACCACAATTGGGGCCGTGGTGGCGAATTGGTACTCGTTTTAAAAATTTT
TACGTGTCAGTACCACGTTTGGACCGAACCGTTGCAAATCGGGCTAAACTTCGTATTTGTAC---GTATTGACGCTGGAA
CTAACCGCCCGGGCCCGCGCGTCAGACGCCACGCTGGCGAATCGGCACTCGCCCGCTCGCTCAATAGGTGTGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCCACTCTG-------TTCCTCCTCGCTCCTGCCTCCCTCCTTGCTCCTCTCTCGTCGCC
CTCGTCACCGCCGGCAGCTTTGCCGGAGCGGAGCGCCG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGTGAGGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCACGGACGGGCTTAACCAGGTGATTTTCCTTGAGCTAGGTCTAGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGATTGTACGAGCTTCG
GCAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGAAACGATGTCGCCATGTGAGAAGCACGGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>chr7D_2604
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--------------------TACATGATAGTACCACATTTGGGGCGGTGGTGGCGAATTGGTATCAAGTTTGGTAATTTT
TACGTGTCAATATCAAGTTTGGGTCGAACCGTTGCAAATCGGGCTAAACTTCATATTTCTAC---GTATTGACGCTGGAA
CTGATCGCCTGGGCCCGCGCGTCAGCTGCCACACTGGCGAATCGGCACCCGCCCGCTCGCTCGATAGGTGCGGTCCGGCT
CGAACCGGACCGGCCCGTGCTCCACTCT-------------------------CTTCCTCCTCGCTCCTCTCTCGCCGCT
CTCGTCGCCGCCCACAGCATTTCCGGACCGGACCGCTG-CCGCCCGCCATGGTTTTCGAAGACGAAAGCAGCGAGGACAC
GTCCAGCCTGCCGTACATGCACTCGACCTCATCCATGGACGGGCTTAACCAGGTGAGTTTCCTTGAGCTGGGTTTTGGGT
TAGGGTTTCAGATTTGGGGCTTTTTGATTTGGTTGATTTCGCTGGGTTTTGATTTGGGCATTTTGTTTGTGCGAGCTTCT
ATAGGTCCCTTTCAGCGTTGAAGATCCAGATTACCAGGGGCTTGAGCTGGATATGATGTCCCCATGTGAGAAGCACGGCA
AGGCATCTGAGAGGCTTGTCGCATTTGAA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S------S
------------S------S---------S------------------------S-SS-----------------S----
----------------------S---------------------S---------------------S----------S--
------------------------S----------S-----------------------------S--------------
--------------------------------------------------------------------------------
---S-----------------------------------------------------------------S----------
----------------------------------------------S------------------S--------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------S-----------------------------------------------
S----------------------SS-------------------------------------------------------
-------------S------------------------------------------------------------------
S--------S---------------S-----------------------------S--------------------S---
---------S-----------------------------------------------------------------SS-SS
SS------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--S---------S-------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
------S-----SSSSSS--------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S----S---------------
-S-----------------------------------------------------S------------------------
-------------------------------------------------------------------------------S
--------------------------S-------------------SS--------------------------------
---------------------------------------------S---------------------S------------
-------------------------------------------------SSSSSSSSS----------------------
-----------------------------------------S--------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
---------------------SSSSSSSSSSSSSSSSSSSS----------------S----------------------
-------------------------------------------------------------------SSSSSSSSSSSSS
SSSSSSSSSSS----------------------------S------------------------S---------------
-----------------------------------------------S--------------------------------
--------------S----------------------------------S---------------S--------------
----S-------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
S-------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S----S----------------------
S------------------S--S------
>forward_905
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-----TCTGAACTTGTCCACTGCCC-------------------------------------------------------
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>reverse_2676
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-----------------------------------CAGCAACATCAGGGGTCCAA-------------------------
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-----------------------------
