>input_sequence_57143
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-----------------------------------------------ATGAACTTGTGCTCCTATGTGGTCAACCCCGCC
ACGCGACAATGGGGACGTCTCCACTACAAGACCGACCACCGCCACCACCTCGCATACCTTGCGTTCGACCCTGCCGTCTC
ACCCCACTATGAGGTGCTTTTGATCCCGTGTGTACCTGACAAAGTGGACCCTGCACAAGACTCTATGGAATGGCCACCAT
CCTCGTGGGTGTTTGATGTGTTCTCATCTAGTACAAGGAAATGGCTCAAGAGGTCCTTTATCCGCCAAGGCGTGGCTGCG
GGCACAGTGACCGATGTTCGGGTAGATCCACGAGAGCCAAAATCTATGTGGCGGGGAGGTCCAAGGCAGCGATATAGTGC
GTACTGGCGAGGATCACTCTATGTGCATTGTCGCGGTGCGTTTGTCGTCAGGTATTACTGCATCTTTGCAGAATCGTACT
TCTACTTC------------------------------------------------------------------------
--------------------------------------------------------------TTGTCTTAGTAGCGTTTC
TCTTATACTAATATTTGAATATTTACACAACAACTTCACCACTATAGCTGTGAAGTTGTTGACATATTTTAGCAATGAAT
TGACAATTTTGCAGATTATCTTTGTCGGATGGCAAGTACCAAGTAATTAAGATGCCAACAGATATTGCAGAAAGAAAACA
GGATCAATATCTTGGCAAATCAGAAAAAGGGGTGTACCTTGCAGCTATAATATATGATGAACATATACTCCAAGTTTATA
CCCTTGTTGAATCAAGCAGACACGTAGATTGGGTGTTGAAGTATCATGTTGATCTCGAGCCATGTGCAACGGCAGATGTC
CGGATCGACACAGGTGAGCTCGAGGGATTTGAAAAAACATGGACCTTAAATGGAGGACGACGAGAAGAAGGATGGGGAGA
AGCAGATGAAGAAAAAGGAGAAGGAGAAAACGGTGGAATGCTAATACCAGAGAATCAAGAATGGGACTCCGACGATGATA
ATGTTCTGAATGTCAAAGCTGATTATGGATGCTTCTATGGAAGGAACGTCTACTTCCTTGGCTTTCACCCCTACAAGGAG
GTTGTTTTCTTGGGGTTATCATTTACAGGAATGGCTTATCATTTGGAAAGCTCGAAGGTTCAGTATCTTGGAGACATGCG
CCCAAAAGATTACTATCATGGACATGCGAATGACATACACGACTCATTTCCGTACACCCCTTGCATGATTGGGGAGCTTC
CAAAACATGCTTCAAGGAGTCGTCGC------AGAGGTTGGAGCATTTAA------------------------------
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------------------
>chr4B_1_TraesCS4B01G118600
TTGACGTCAACCGCGGTCGGCGCGTGGCGTACGGGCGCATAGCAGTTCCACCGCACGCCCCCGAGTGGCAACCGCTGACC
GCGGGAGGGCAACCAACGTGCAGGCGAACTGTCTCGCATGCCGCACACGTGCCTCGTCCTACGTGGCGCAGAAAAACGAC
CGGATTGTGCCAAGATTCGTGCACAAAGTACTCAACAATGATGCTGGCGTGTGGTCGAGATGGTGAACGCCCACACGTGT
GGGCGTTAACATTATCGAAGATTTATCATAGATTCTAGTTAGAAAGTTTTGCCGCGCTGCATAGGTTTGAACTTCTAGAT
ATGTTCTATGTGAGACAAACAAAAAAGAGAAAATTTCATATACAAAGTTAGTTGTGTGGCACGAATCCTAAAGCGATATT
GAAGAGCTAATATAGCAGGGCCTGGGTGCAAGGGCTATAAAAATC-----------------------------------
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---------------------------------------------------------------------------CACGA
CTCGCGTGATCGTGGTGTTTCTACTATCGTGTCCGATTCTGGTCAGGTATTGATCCCGAGTTCGGAGGCGTTC--ATATA
AGCAGCGCCGCAGCCTTTCTCTTCTTTTCTCGAACAAAACCCGACACGAGTTGCACAAGTGCCGGG--------------
------------------------------------CCGGCTGAACGCGCCGCCGCCGTCGCCGTATCTCCTTAATCCGG
GCCTCTAGCTAGCCTGCGTGAAAGGTCGCGGAAGCCAGACATGGACCAGACCGAAGCCCTACCTGACGACACGCGA----
-CATCCTCGGCCGCCTCCCGCCGTGTGATCTAGCCGCGTCCCGCTGCGTCCGCAAGACATGGCGCGCCGTCGTGGACGCC
CGCCGCCTGCTGCTCCCGCACCTGCTCCCGCATTCGCTGCATGGCATCTTCATCAACTACATCGACTACGAGAGCCCCCG
CTGCTTCTCGCGCCCCTCCGCACAGAAGCCCTTGATCGACTGCAACCTTGACTTCCTGCCTGGTTACGCCGAGGATTTCG
ACCCGATCGTAGATCACTGCAACGGCCTCTTGCTTTATGAGAGCGACATGAACTTGTGCTCCTATGTGGTCAACCCCGCC
ACGCGACAATGGGGACGTCTCCACTACAAGACCGACCACCGCCACCACCTCGCATACCTTGCGTTCGACCCTGCCGTCTC
ACCCCACTATGAGGTGCTTTTGATCCCGTGTGTACCTGACAAAGTGGACCCTGCACAAGACTCTATGGAATGGCCACCAT
CCTCGTGGGTGTTTGATGTGTTCTCATCTAGTACAAGGAAATGGCTCAAGAGGTCCTTTATCCGCCAAGGCGTGGCTGCG
GGCACAGTGACCGATGTTCGGGTAGATCCACGAGAGCCAAAATCTATGTGGCGGGGAGGTCCAAGGCAGCGATATAGTGC
GTACTGGCGAGGATCACTCTATGTGCATTGTCGCGGTGCGTTTGTCGTCAGGTATTACTGCATCTTTGCAGAATCGTACT
TCTACTTC------------------------------------------------------------------------
--------------------------------------------------------------TTGTCTTAGTAGCGTTTC
TCTTATACTAATATTTGAATATTTACACAACAACTTCACCACTATAGCTGTGAAGTTGTTGACATATTTTAGCAATGAAT
TGACAATTTTGCAGATTATCTTTGTCGGATGGCAAGTACCAAGTAATTAAGATGCCAACAGATATTGCAGAAAGAAAACA
GGATCAATATCTTGGCAAATCAGAAAAAGGGGTGTACCTTGCAGCTATAATATATGATGAACATATACTCCAAGTTTATA
CCCTTGTTGAATCAAGCAGACACGTAGATTGGGTGTTGAAGTATCATGTTGATCTCGAGCCATGTGCAACGGCAGATGTC
CGGATCGACACAGGTGAGCTCGAGGGATTTGAAAAAACATGGACCTTAAATGGAGGACGACGAGAAGAAGGATGGGGAGA
AGCAGATGAAGAAAAAGGAGAAGGAGAAAACGGTGGAATGCTAATACCAGAGAATCAAGAATGGGACTCCGACGATGATA
ATGTTCTGAATGTCAAAGCTGATTATGGATGCTTCTATGGAAGGAACGTCTACTTCCTTGGCTTTCACCCCTACAAGGAG
GTTGTTTTCTTGGGGTTATCATTTACAGGAATGGCTTATCATTTGGAAAGCTCGAAGGTTCAGTATCTTGGAGACATGCG
CCCAAAAGATTACTATCATGGACATGCGAATGACATACACGACTCATTTCCGTACACCCCTTGCATGATTGGGGAGCTTC
CAAAACATGCTTCAAGGAGTCGTCGC------AGAGGTTGGAGCATTTAAGCTGTTTGGCTGAACAATATAAGAAATGGC
AGCCGATGTTTGGGTCCTCGGTTTTACCTTTGATGGTATTCTCTTTGAAACTGCTCCGGGAGGTCGGTTACGTATTAACA
TGCGTTCTGTGTCATTTAGATTATTCAAGGTTCTAGTTAAGTTTTCCGCAAAAAAAAAAAGGTTCTAGTTAAGTGCCAAG
AAGTTTTTCTTCCTTTTTTTGCATTTCTCTGGTTTCTTCAGCTATTTGAT----AACTTCTGCAGTTGTATGAACGAGTG
CACATGTA---CAACTGAATTCGTGCACCGATAGTTTGCAATTCTGAGCTTTGGGTT-TTCTGAATCCTCGATGATTCAC
TTGGATGGATGTATGGTGTGTAGGTTCTGAATTACAATGATCATCATGTGTTACACACAGAAACGGGCCTAAGGGCATCT
CCAGCCGTTAAGCCCCCGAGGAGGCATTTTTTTCGCCCCTTGGGGGGCTACCGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGGCCGGCTCCTTCTCGCGC
CCGTCAGCCGTCGTCCGGCCCGCTCGCCGGCGTCAGCCCACTCGCCCGCGCAGCCACGGCCCGGCGCCGCTCTCCCTCCC
TCCCAAGCCCCACGCCAT
>chr4D_437
AATCCGGAATGGAACTCCGACAATGATAATGTTCTGGATCTTGAAGATGATAGGGGAGGCTTTTCTCATTACATTGACTT
CCTTGGCTTTCACCCCTACAACGAAGTTGTTTTCTTGGGATTATCATTTAAAGTAGTGGCTTATCATTTGAAAACCTCAA
AGGTTCAGTATCTAGGTAACATGCGTCCAAGTGATTACTACCTTTTACAAACAAATGGAATATACGAATCATTTCCGTAC
ACCCCTTGCATGATTGGGGAGCTTCAAAAGCACACTTCAAGGAGTAGTCATTGAGATTATTGTTTGCCTGCAACCGTATA
GGAAATGGAAAATCAATGATTGGGTTCTCAAATTTACTTTTATTAACCGTCCCTTTGAAACTGCCCAGCTGATTCATTAC
GTGGTCAAAACATGGGTCATGTATTATTTACACAATTCAAGGTTCAAGTCAAGTACCGATAAATGTTTGGCGGTTGTGCT
TTAGATGGTTTCTTTACCTATTTGATAAACTTTTTTAGTTGCATAAATGAGTAGACTTGTACTATTGAATTCGAGTCAAA
TTTTGCACCGGTGTGGTATTTGCAGATATGTTGTGCAATTGTGTTGCGTACTTTCAAACTCTAAGCTTTCAATTCATTTG
AATCCTTGCCGACTCACTTGGATGGACGGTTGGTGTAGGCGTTGAATTCCAATGATTTTGATGTATTATTGTACCTAAAA
TGCGAGCACTTTAACCGGAATGAGCAATGCAAGATACGTAGCCGCCATCTCCCCAATTTTTTTTAAGGTTCCTCCACCTC
CCACCGGCTCCGCCATTAGTCTGCCTCGTCTCCAATGGCCTTAGGGTCATAGGGGCGCGGTGGATTCTGGCCCTTGTTGG
TGTGAGGGCTCTGTTTTTAGTTGTTTCTTTGATTTTTGTTAGGGTTTGTGTCCTGCTCAGGAAGACGAGACGGCGGCGGC
ACCCTGAAGATGGAATAAAGTTATCCCCGCCTAGCCCACGTGTCAGTGGTGCGTCTAGCATCGTAAGTTGGCATGCGGAT
GTGCGTCTTCGGCGGATCTGCCTTTGATGGATTTGCTCAGATCTGGTCATCATTGGTCTGCATTCATGTATCTTCAGGTC
GGATCCTTCTGATATACGCTACTCTTCATCAGCGGCATTTTCTGTTCTGTTGCACTGGTCCTATGGGGTCTCAGCACGGC
AATTTCCTCACTGCCGACTACAATAAGTTTTGTCCGTCTCCGACGAGAAAGGGGGGAAGGGGGCGATGACGGCGGCGTGC
CTTCCGCTCGCTTCAGTGCTTGTAGTCGTCACTGGGTGGACTAAGGATTTGGAGTAACTTTTATTATTTTTGTTATTATT
CGATGTACTGTCATGATTGAAAATGAATAGATCGAAAAAATTCACGCAAAAAATATACCTAAAATTCCTAAATATTAGAT
AAGACGACACACATGAGGTGTCAAGGTGATTTTTTTACCTAGTGTAAGGTGATTCAATCACCCCGCTTTGAGTCGGCCGC
GCCCTCTTAGTAGACAGGAATATTTTTTTTCTTACCTAGTGTCCAGGTGACTTCGATCACCCCGCTTCGAGTCGACGGTG
TCCTATCAAGAGACAAGAAAAGAATATTTTCTTTTGAGACCACATACGATGATTCCGATAGGTGAGAGAGTTAATTTCTA
CCCAAATAATTGTTTTCTTTTCCTCACAACAGCAGGAATGGTTGTGCATCGTACTCCCTCCGTTCCAAATTACTCATCGT
GGTTTTAGTTCAAATTTGAACTAAAACCACGATGAGTAATTTGGAACGGAGGGAGCAGCATTTAACAAAGAAAACTATCA
CTGTAGGGATTGGTGTCCCACGGAACTACCATTTTGGAAACTTCAACAAAAAACTACAACTTTAACCTAATCTTGTTGAA
AAGAACTACCAATTTCGTTTAATGGTTGCTTTAGATGATTTAAACGTGTTTATGACAGACCATACCCACCGTCAAGGCTG
ACGTGGTCAGCTTGGTTAGGTTTGACCGGCACCTAAGGCGTAATGACATGTGGAACCCACCTGTCAATTATATCTCCTAC
CTTGAAATTTCCACTTCCCGCCGGAGTCGATTGTCATCGCAGCTCGCTGGACGAACTCCTAACGAACACCGCCATGGAGG
TGTCCAAGCAGGCGTCGTGGCCCGACGACTTCCTCTGCCCCATCTCCCTCGAGGTCATGATAGACCCCGTCATCCTCCCC
TCTGGCTACACCTTCACCACTATAGCAGTGAAATTGCTGACGTATTTTATCAATGAATTGGCAATTTTGCATATTACCTT
TGTCGGATTGGAAGTACCAAGTAGTTAAGATGCCAATAGATATTGCAGAAAGAAAACATGATCAATATCTTGGCAAATCG
GAAAAAGAACTAACACAAGCACAGAAGAGAAAGAATACGCATTGTTGTAGGCAAAAGTCTTTAAATCCACCCAACATTTC
TGAAAGAAAATCAGCCGTGTCCCGCGATCTCCACGCATCCCTTCATGAGGCCAAACACCTCTCTGTCTCTAGCCTTATCC
CTCGCAGGCATGCAGCGATGCACGTCCACACACGTTCTTCCATCCCCACAGACGTTGACCAGTTCGTCCTGCCTAATGGA
TCTCGTCGACATCTCTCTTCTACTCTGGCAGCTTCCTTGCCGCCGTCATGCCTAAACCGGCTCGCGTGCGGCATGCCCCT
CTGCCACCATTCCCTCCGCTCAAGCCGACGCGCGCCGTTAGACACCACTGTTGCATCAGGCCACACACCAATGCTTTGAG
GGGAGGAAAACCACCATTATGAGCTCAGCGACACCGCAGCACCACAGCGAGTCGCCGTTGCTGCCATGGAGCATCAGGAG
ATCGTCAATCGTTACAATCACCGGACCGCTGGGAGCATCAGTAGTGTTGCAATGGAACATCGTCGAGCCGTCGGAGCATC
GCCGGTGCTGCAATGGGATTTTGCAGGATTACCTTTGCTGCGAGGAGTCGCTGGTGCTCCGATTGAGCACAGCCAGGCTG
CACACTACTGCCATGGAGTTGCAATGGAGCTCGCCGGGGCTGTCGGTGCTGCGACGGAGCTACGATGGAGAATCGCTGGG
GCGCCGATGCTGCGATGGAGCATCCTTGTGCCCCCGGTGCTGTGATGGAGAGGTGCTTCAACCGGCGCTCCAACGAACAG
GGCGATGCACTGTTGGGTGGGGTAGTTGATGTGTTGTGATGGAGGGCTGTTCTAATTGGCGCTCCGACGAACAGGGCGCT
GCGACAACTTTCAGTTTATTGGAGCACAATACTATATAGAGTCGGGGATCCGGGATCCTACGGCCTGCGAGGCCGCTTAA
ATTTGGCTATTATCAACCGGTTGATTTGTAGCAGCCTCTTGTTGTAGTCGCACGTATCAGGTATCAATAAAGAGTCACGA
CTCACGAGA-CGTGGTGTTTCTACTATCGTGTCCGATTCCGGTCAGGTATTGATCCCGAGTTCAGAGGCGTCCATATATA
AGCAACGCCGCAGCC--TCTCTTCTTTTCTCGACTAGTA-----------------------------------------
-----------GAATCCTACACGAGTTGCTCAAGGACCGGCTGAACGCGCCGCCGCCGTCGCCGTATCTCCTTAATCCGG
GCCTCTATCTAGCCTGCGTGAAAGGTC---------AGACATGGACCAGACCGAAGCCCTGCCAGACGACACGCTCGCCA
GCATCCTCGGCCGCCTTCCGCCGTGCGACCTCGCCGCGTCCCGCTGCGTCCGCAAGACGTGGCGCGCCGTGGTGGACGCC
CGCCGCCTGCTGCTCCCGCACCTGCTCCCGCATTCGCTGCATGGCATCTTCATCAACTACATCGACTACGAGAGCCCGCG
CTGCTTCTCGCGCCCCTCCACACAGAAGCCCGCGATCGACTGCAACCTCGACTTCCTGCCTGGTTACGCCGAGGATTTCG
ATTCAATCGTAGATCACTGCAACGGCCTCTTGCTTTATGAGAGCGACATGAACTTGTGCTCCTACGTGGTCAACCCCGCC
ACGAGACAATGGGAACGTCTCCGCTACAAGACCGACGCCCGCCACCACCTCGCATACCTTGCGTTCGACCCTGCCGTCTC
ACCCCACTATGAGGTGCTTTTGATCCCGTGTGTACCTGACAAAGTGGACCCTGCACAAGATTCCATGGAATGGCCACCAT
CCTCGTGGGTGTTTGATGTGTTCTCATCTAGTACAAGGAAATGGCTCAAGAGGTCCTTTATCCGCCAAGGCGAGGCTGCG
GGCACGGTGACCGATGTTCGGGTAGATCCACTACAGCCAAAATCTATGTGTTGGGGAGGTCCAAGGCGGCGATATAGTGC
GTACTGGCGAGGATCACTCTATGTGCATTGTCGCGGTGCGTTTGTCGTCAGGTATTACTGCATCTTTGCAGAATCGCACT
TCTACTTC------------------------------------------------------------------------
--------------------------------------------------------------TTGTCTTAGTAGCGTTTT
CTCTTA--TAATATTTGAATATTTATACGACAACTTCACCACTATAGCGGTGAAATTGTTGACATATTTTATCAATGAAT
TGACAATTTTGCAGATCATCTATGTCGGATGGCAAGTACCAAGTAATTAAGATGCCAATAGATATTGTAGAAAGAAAACA
GGATCAATATCTTGGCAAATCAGAAAAAGGGGTGTACCTTGCAGCTATAATATATGATGAACATATACTCCAAGTTAAAA
CCCTTGTTGAATCAAGCAGACACATAGATTGGGTGTTGAAGTATCATGTTGATCTTGAGCCATGTGCAACGGCAGATTGC
CGGATCGACACAGGTGAGCTCGAGGGATTTGAAAAAACATGGACCTTAGATGGAGGACGACGAGAAGGAGGATGGGGAGA
AGCAGATGAAGAAAAAGGAGAAGGAGAAAACGGTGGAATGCTAATACCGAAGAATCTAGAATGGGACTCCGACGATGATA
ATGTTCTGAATGGTAAAGCTGATTATGGATGCTTCTATGGAAGGAACGTCTACTTCCTTGGCTTTCACCCCTACAAGGAG
GTTGTTTTCTTGGGGTTATCATTTACAGGAATGGCTTATCATTTGGAAAGCTCGAAGGTTCAGTATCTGGGAGACATGCG
CCCAAAAGATTACTATCATGGACATGCGAATGGCATATACGACTCATTTCCGTACACCCCTTGCATGATTGGGGAGCTTC
GAAATCATGCTTCAAGGAGTCGTCGC------AGAGGTTGGAGCATTTAAGCTGTTTGGCTGAACAATATAAGAAATGGC
AGCCGATGTTTGGGTCCTCGGCTTCACCTTTGATGGTGTCCTCTTTGAAACTGCTCCAGCAGGTCGGTTACGTATTAACA
TGTGTTCTGTATCATTTAGATTATTC--------------------------------AAGGTTCTAGTTAAGTGCCAAG
AAGTTTCTTTTGTTG---TTGCATTTCTCTGGTTTCTTCAGCTATTTGAT----AACTTTTGCAGTTGTATGAACGAGTA
CACATGTAGTACAACTGAATTCGTGCACCGATAGTTTGCAATTCTGAGCTTTGGGTTCTTCTGAATCCTCGATGATTCAC
TTGGATGGATGTATGGTGTGTAGGTGCTGAATTACAATGATCATCATGTGTTACACACAGAAACAGGCCTAA--------
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>chr4A_461
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----------CGTGGTGTTTCTACTATCGTGTCCGATTCTGGTCAGGT-----TCCCGAGTTCGGAGGCGCCC--ATATA
AGCAGCGCCGCAGCC--TCTCTTCTTTTCTCGACTAGAACCCTACACGAGTTTTTTTTTTTTTGGAGAGGAACCTGACCA
GAATCGGACACGAACCCTACACGAGTTGCTCAAGTACCGGCTGAACGCGCCGCCGCCGTCGCCGTATCTCCTTAATCC-G
GCCTCTAGCTAGCCTGCGTGAAAGGTCGCGGAAGCCAGACATGGACCAGACCGAAGCCCTACCCGACGACACGCTCGCCA
GCATCCTCGGCCGCCTCCCGCCGTGCGACCTCGCCGCGTCCCGCTGCGTCCGCAAGACGTGGCGCGCCGTCGTGGACGCC
CACCGCCTGCTGCTC------------CCGCATTCGCTGCATGGCATCTTCATCAACTACATCGACTGCGAGAGCCCGCG
CTGCTTCTCGCGCCCCTCCACACAGAAGCCCGCGATCGACTGCAACCTCGACTTCCTGCCTGGTTACGCCGAGGATTTCG
ATTCAATCGTAGACCACTGCAATGGCCTCTTGCTTTATGAGAGCGACATGAACTTGTGCTCCTACGTGGTCAACCCCGCC
ACGCGACAATGGGGACGTCTCCACTACAAGACCGACCACCGCCACCACCTCGCATACCTTGCGTTCGACCCCGCCGTCTC
ACCCCACTATGAGGTGCTTTTGATCCCGTGTGTGCCTGACAAAGTGGACCCTGCACAAGATTCCATGGAATGGCCACCAT
CCTCGTGGGTGTTTGATGTGTTCTCATCTAGTACAAGGAAATGGCTCAAGAGGTCCTTTATCCGCCAAGGCGAGGCTGCG
GGCACGGTGACCGATGTTCGGGTAGATCCACTAGAGCCAAAATCTATGTGCGGGGGAGGTCCAAGGCGGCGATATAGTGC
GTACTGGCGAGGATCACTCTATGTGCATTGTCGCGGTGCGTTTGTCGTCAGGTATTACCGCATCTTTGCAGAGTCGCACT
TCTACTTCTCGAACGATGCTTCGGTGCTTTAAGGCACCTACCTTTGTATCTATGACATATGAGCCCAACAGGTGGCTGGC
CCATATGTCAATGACCCAAAGGCAGGTGCCTTTAAGGCACCGAAGCTGCGTCCCTACTTCTTTTGTCTTAGTAGCGTTTT
CTCTTA--TAATATTTGAATATTTATACGACAACTTCACCACTATAGCT-------------------------ATGAAT
TGATAATTTTGCAGATTATCTTTGTCGGACAGCAAGTACCAAGTAATTAAGATGCCAATAGATATTGCAGAAAGAAAACA
GGATCAATATCTTGGCAAATCAGAAAAAGGGGTGTACCTTGCAGCTATAATATATGATAAACATATACTCCAAGTTTATA
CCCTTGTTGAATCAAGCAGACACATAGATTGGGTGTTGAAGTATCATGTTGATCTCGAGCCATGTGCAACGGCAGATTTC
CGGATCGACACAGATGAGCTCGAGGGATTTGAAAAAACATGGACCTTGGATGGAGGACGACGAGAATGGAGATGGGGAGA
AGCAGATGAAGAAGAAGGAGAAGGAGAAAACGGTGGGATGCTAATACCAGAGAATCTAGAATGGGACTCCGACGATGATA
ATGTTCTGAATGTTAAAGCTGATTATGGATGCTTCTATGGAGGGAACGTCTACTTCCTTGGCTTTCACCCTTACAAGGAG
GTTGTTTTCTTGGGGTTATCATTTACAGGAATGGCTTATCATTTGGAAAGCTCGAAGGTTCAGTATCTTGGAGACATGCG
CCCAAAAGATTACTATCATGGACATGCGAATGGCATATACGATTCATTTCCGTACACCCCTTGCATGATTGGGAGGCTTC
AGAGTCATGCTTCAAGGAGTCGTCGCCGTCGCAGAAGTTAGAGCATTTCGGCTGTTTGACTGAACAATATAGGAAATGGC
AGCCGATGTTTGGGTCCTCCGTTTTACCTTTGATGATGTTCTCGTTGAAACTGCTCCGGCAGGTCGGTTACGTGTTAACC
TGCGTTCTGTATCATTTAGATTATTC--------------------------------AAGGGTCTAGTTAAGTGCCAAG
AAGTCTTAGCC-----TTTTGCATTTCTCTGGTTTCTTCAGCTATTTGAGTATCAACTTTTGCAGTTGCATGAATGAGTA
GACATGTA---CAACCGAATTCGTGCACCGATAGTTTGCAACCCTGAGCTTTGGGTTCTTCTGATTCCTCGATGATTCAC
TTGGATGGATGTAT------------------------------------------------------------------
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>SNPs
SSSS--SS-SSSSSSSS--S-SSSSSSSS-SSSSSS-SSSSSS-SSSSS-SS-SSSSSS-SSSSS-SSSS--SSSSSSSS
S-SS-SSSSSS---SSSSSSSS-SS-SSS-S-SSSSSSSSSSSSSSSSSSSSS-S--SSSSSS-SSSSSSS---SSSS-S
S--S-SSSSSSSSSSS-SSSSSS-SSSSS-S-S-SS-S-SSSSS-SS-SSSSSSSS-SS--SSSSS-SS-SSSSS---SS
SSS-S--SSSSSSS-S-SSSSS--SSS-SSS-SS--SSSSS--SSSS-SSSSSSSSS-SSSSSSSSSSSSSSSS-SSSSS
SSSSSSSSSSSSSS-SSS-SSSSSSSSSS---S--S-S-S--SS--SSSSSSSS-SSSSSSS-SSSSSSSS-SSS--SSS
-SS-SSSS--S--S-SSSSSSSSSSS-SS-SSSSS-SS--SSS-------------------------------------
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---S--S--S-------------------------------------------------------------S--------
---------------SS----------------SS-S-----S---------SSSSSSS-SSS--S--------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------SS----
-------------------------S--S--S--------------------------S---------------------
-----------------------------------------------------------------------------S--
-------------------S-----------SS---------------S-------------------------------
-SS-S-----------------------------------------------------------S---------------
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------------------------------------------------------------S--S----------------
------------------------------------------------------------------------S-------
-----S-------------------------S------------------SS---------------S------------
----------------------------------------------------------------------------S---
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-------------------------------------------------------------------------------S
SSS-SSSS-----------------S--S-------------------------S----------------S--------
----------------------------------------------------------S---------------------
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-----------------------S-----------------------------------------------------S--
------------------------------------------------S------------------S------------
--------------------------------------------------------S-----------------------
-------------S------------------------------------------------------------------
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--------------------------------S----S------------------------------------------
S---S---------------------------------------------------------------------------
-------------------------------------S---------------------S--------------------
----------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------
--------S--SS-SS-------------------------------------------S-------------------S
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-------------------------S--------------------------------------S-------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_229
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-------------------------------------------------TGTGGTCGAGATGGTGAACG-----------
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>reverse_4388
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-------------------------------------------------------------------AGCGATATAGTGC
GTACTGGC------------------------------------------------------------------------
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>forward_3581
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-----------------------------------------CGACACGAGTTGCACAAGTG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_5097
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AAGAATGGGACTCCGACGATG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_4221
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------AAGTGGACCCTGCACAAGAC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_5836
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CATCT
CCAGCCGTTAAGCCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
